mRNA_L-elsbetiae_contig613.14695.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig613.14695.1
Unique NamemRNA_L-elsbetiae_contig613.14695.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig613.14695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig613contigL-elsbetiae_contig613:27646..29614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1095
Cds size1095
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816670.998742-CDS-L-elsbetiae_contig613:27645..285431622816670.998742-CDS-L-elsbetiae_contig613:27645..28543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig613 27646..28543 -
1691683728.123179-CDS-L-elsbetiae_contig613:27645..285431691683728.123179-CDS-L-elsbetiae_contig613:27645..28543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig613 27646..28543 -
1622816671.0096729-CDS-L-elsbetiae_contig613:29417..296141622816671.0096729-CDS-L-elsbetiae_contig613:29417..29614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig613 29418..29614 -
1691683728.1370232-CDS-L-elsbetiae_contig613:29417..296141691683728.1370232-CDS-L-elsbetiae_contig613:29417..29614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig613 29418..29614 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig613.14695.1prot_L-elsbetiae_contig613.14695.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig613 27646..29614 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig613.14695.1

>prot_L-elsbetiae_contig613.14695.1 ID=prot_L-elsbetiae_contig613.14695.1|Name=mRNA_L-elsbetiae_contig613.14695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=365bp
VDDPEAGRRTPPPRAPSGGDDDPCGDGSGSPELTMLFADEPEGRGPEAAV
AGHAGTGALEGERRVSEPATLALASPPPAYSLASAGPPGPHGRQTAPDSS
QRAPGAAAEGTRMQQDERTSLATDATPSITGFQHQLDPDVDGPARAKAAP
ELAAAGRLAKVDRQPGDCCRRPGGGPDESTIDAVSTGLLPGGLGDRGSRP
PLPLPTGPAVSGAVAPVVDAAQASSMAAAAAASATHAPGSRSATAATIAV
EGGSSHAAGGGGHTRPPHGAARMGLSSPPEDAPRRTPSQAVGVSFSSSSP
SPERLGAPASSQSEKGRKRARRGMQQEEKNRGERRRHKGDSVPTVTVTVA
AGDHGAPAGKASARG
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mRNA from alignment at L-elsbetiae_contig613:27646..29614-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig613.14695.1 ID=mRNA_L-elsbetiae_contig613.14695.1|Name=mRNA_L-elsbetiae_contig613.14695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1969bp|location=Sequence derived from alignment at L-elsbetiae_contig613:27646..29614- (Laminarionema elsbetiae ELsaHSoW15)
GTGGACGATCCTGAAGCAGGCAGGCGTACACCGCCGCCGCGGGCGCCGTC
AGGTGGCGATGACGACCCCTGCGGTGACGGCAGCGGCAGCCCGGAGTTGA
CGATGCTGTTCGCTGACGAGCCCGAGGGGCGGGGTCCAGAAGCAGCGGTC
GCTGGGCACGCCGGGACGGGTGCTTTGGAGGGTGAACGCCGGGTCAGGTG
AGAATAATAGCGGTCGTGCGGTCTAAGCTGTGGCATCAAAATGGTGTGTG
CAGTAGAATAGGAGGGCGGCCACCACGTGGTTAGCCGGGACGCTCAGGTG
GGCGGTATCGTTGCGCAGGGATTCGAACTAAACATTTCCAAATCACCTAG
CTAATCCTCTAGTTACTCATACGCCGTGTACTAACTACCTCTCGACATTT
TTTATGTGTCATACGGAAGTTATCATACCCACACTACTATTTCCCAACAC
ATCATACTACATACCACCTTTCCCAATTCTGACTATTGTCCTATCATACC
ACTAATATTGAACTCTCTCCTCTAAAGCAGTAACCCACATATATTAAACC
AGCATTTTGATTTAGTTCAACAACGCGATGTGTTCCTATTTTGAAGTAGA
TGACAACATTACGGCATCACGGTGGGCTCTACCCGCTGGAAAATTGTGGA
CCGACCTCGCAAATCTAAAGCTTTGCAGGGGAGATGTTGAATTCTTCTGA
TATTTAGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCTCTGTATG
GAATACCGTTTGAACCCCATACAGTATCGAGTCTTTGCTCTAGTATGGGT
TAGGTTCCATCTTTGATTCTTTGTTTTATTTTAAATAGGAGGCGTCGAAT
CGCTGGTAGCACCAATTTTCCTCCGTCATCGCTATCGGATCGAGCTGCTA
AGTCCACAGCAGTATCACGAAGGGCGGTATACCGACCTAGATATTGTCGT
TTTAATTGTTTTTTTTACTCTTGGTCAATTTGCATTCTTGGACTCCAAAT
TATTGCCGAACCAACACCGAACAACCGCTGCTTGTCGCTTCATTGCACCC
CATCTGATGTGTGATGTGCAGCGAACCGGCGACCTTGGCCCTAGCGTCGC
CACCACCGGCCTACTCTCTCGCTAGCGCCGGTCCTCCAGGCCCGCACGGA
CGGCAGACCGCCCCGGACAGTTCGCAGCGAGCGCCTGGTGCCGCCGCAGA
GGGCACCAGAATGCAACAAGACGAGAGGACAAGCCTCGCAACCGATGCGA
CGCCGTCGATCACCGGCTTTCAGCACCAGCTCGATCCCGATGTCGACGGC
CCAGCGCGAGCCAAAGCAGCCCCGGAGCTCGCCGCCGCAGGCCGTCTGGC
GAAGGTAGACCGGCAGCCGGGCGACTGCTGCCGTCGGCCTGGAGGAGGGC
CGGACGAGTCGACGATCGATGCCGTCAGCACCGGCTTGCTGCCGGGCGGT
CTCGGCGATCGTGGCAGCCGGCCCCCTCTCCCGCTGCCGACGGGGCCAGC
GGTTTCAGGAGCCGTTGCCCCCGTAGTAGACGCCGCGCAAGCCTCTTCCA
TGGCGGCGGCGGCGGCGGCATCGGCCACCCACGCGCCTGGCAGTAGGAGC
GCCACCGCTGCCACCATTGCTGTGGAAGGAGGCAGCAGCCATGCCGCGGG
AGGGGGTGGTCACACCCGGCCGCCTCACGGAGCCGCACGCATGGGCCTTT
CGTCGCCCCCGGAAGACGCTCCGAGGAGGACGCCTTCTCAAGCCGTAGGG
GTGTCATTTTCGTCGTCTTCACCATCCCCGGAGAGACTGGGCGCACCTGC
CTCATCTCAGAGCGAGAAGGGCCGGAAGCGCGCGAGGCGGGGGATGCAGC
AGGAGGAGAAGAACCGAGGAGAACGACGCCGACACAAGGGGGATTCCGTG
CCGACGGTGACAGTGACAGTGGCGGCAGGAGATCACGGAGCACCGGCCGG
GAAAGCTTCAGCGAGGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig613:27646..29614-

>mRNA_L-elsbetiae_contig613.14695.1 ID=mRNA_L-elsbetiae_contig613.14695.1|Name=mRNA_L-elsbetiae_contig613.14695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2190bp|location=Sequence derived from alignment at L-elsbetiae_contig613:27646..29614- (Laminarionema elsbetiae ELsaHSoW15)
GTGGACGATCCTGAAGCAGGCAGGCGTACACCGCCGCCGCGGGCGCCGTC
AGGTGGCGATGACGACCCCTGCGGTGACGGCAGCGGCAGCCCGGAGTTGA
CGATGCTGTTCGCTGACGAGCCCGAGGGGCGGGGTCCAGAAGCAGCGGTC
GCTGGGCACGCCGGGACGGGTGCTTTGGAGGGTGAACGCCGGGTCAGGTG
GACGATCCTGAAGCAGGCAGGCGTACACCGCCGCCGCGGGCGCCGTCAGG
TGGCGATGACGACCCCTGCGGTGACGGCAGCGGCAGCCCGGAGTTGACGA
TGCTGTTCGCTGACGAGCCCGAGGGGCGGGGTCCAGAAGCAGCGGTCGCT
GGGCACGCCGGGACGGGTGCTTTGGAGGGTGAACGCCGGGTCAGCGAACC
GGCGACCTTGGCCCTAGCGTCGCCACCACCGGCCTACTCTCTCGCTAGCG
CCGGTCCTCCAGGCCCGCACGGACGGCAGACCGCCCCGGACAGTTCGCAG
CGAGCGCCTGGTGCCGCCGCAGAGGGCACCAGAATGCAACAAGACGAGAG
GACAAGCCTCGCAACCGATGCGACGCCGTCGATCACCGGCTTTCAGCACC
AGCTCGATCCCGATGTCGACGGCCCAGCGCGAGCCAAAGCAGCCCCGGAG
CTCGCCGCCGCAGGCCGTCTGGCGAAGGTAGACCGGCAGCCGGGCGACTG
CTGCCGTCGGCCTGGAGGAGGGCCGGACGAGTCGACGATCGATGCCGTCA
GCACCGGCTTGCTGCCGGGCGGTCTCGGCGATCGTGGCAGCCGGCCCCCT
CTCCCGCTGCCGACGGGGCCAGCGGTTTCAGGAGCCGTTGCCCCCGTAGT
AGACGCCGCGCAAGCCTCTTCCATGGCGGCGGCGGCGGCGGCATCGGCCA
CCCACGCGCCTGGCAGTAGGAGCGCCACCGCTGCCACCATTGCTGTGGAA
GGAGGCAGCAGCCATGCCGCGGGAGGGGGTGGTCACACCCGGCCGCCTCA
CGGAGCCGCACGCATGGGCCTTTCGTCGCCCCCGGAAGACGCTCCGAGGA
GGACGCCTTCTCAAGCCGTAGGGGTGTCATTTTCGTCGTCTTCACCATCC
CCGGAGAGACTGGGCGCACCTGCCTCATCTCAGAGCGAGAAGGGCCGGAA
GCGCGCGAGGCGGGGGATGCAGCAGGAGGAGAAGAACCGAGGAGAACGAC
GCCGACACAAGGGGGATTCCGTGCCGACGGTGACAGTGACAGTGGCGGCA
GGAGATCACGGAGCACCGGCCGGGAAAGCTTCAGCGAGGGGGCGAACCGG
CGACCTTGGCCCTAGCGTCGCCACCACCGGCCTACTCTCTCGCTAGCGCC
GGTCCTCCAGGCCCGCACGGACGGCAGACCGCCCCGGACAGTTCGCAGCG
AGCGCCTGGTGCCGCCGCAGAGGGCACCAGAATGCAACAAGACGAGAGGA
CAAGCCTCGCAACCGATGCGACGCCGTCGATCACCGGCTTTCAGCACCAG
CTCGATCCCGATGTCGACGGCCCAGCGCGAGCCAAAGCAGCCCCGGAGCT
CGCCGCCGCAGGCCGTCTGGCGAAGGTAGACCGGCAGCCGGGCGACTGCT
GCCGTCGGCCTGGAGGAGGGCCGGACGAGTCGACGATCGATGCCGTCAGC
ACCGGCTTGCTGCCGGGCGGTCTCGGCGATCGTGGCAGCCGGCCCCCTCT
CCCGCTGCCGACGGGGCCAGCGGTTTCAGGAGCCGTTGCCCCCGTAGTAG
ACGCCGCGCAAGCCTCTTCCATGGCGGCGGCGGCGGCGGCATCGGCCACC
CACGCGCCTGGCAGTAGGAGCGCCACCGCTGCCACCATTGCTGTGGAAGG
AGGCAGCAGCCATGCCGCGGGAGGGGGTGGTCACACCCGGCCGCCTCACG
GAGCCGCACGCATGGGCCTTTCGTCGCCCCCGGAAGACGCTCCGAGGAGG
ACGCCTTCTCAAGCCGTAGGGGTGTCATTTTCGTCGTCTTCACCATCCCC
GGAGAGACTGGGCGCACCTGCCTCATCTCAGAGCGAGAAGGGCCGGAAGC
GCGCGAGGCGGGGGATGCAGCAGGAGGAGAAGAACCGAGGAGAACGACGC
CGACACAAGGGGGATTCCGTGCCGACGGTGACAGTGACAGTGGCGGCAGG
AGATCACGGAGCACCGGCCGGGAAAGCTTCAGCGAGGGGG
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