mRNA_L-elsbetiae_contig603.14565.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: D8LBG3_ECTSI (2-keto-3-deoxy-6-phosphogluconate aldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG3_ECTSI) HSP 1 Score: 219 bits (559), Expect = 5.970e-66 Identity = 116/191 (60.73%), Postives = 145/191 (75.92%), Query Frame = 2 Query: 221 IFIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSS-VPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFI 790 I I VLRDVQL+RA EV RALY+ GF M+S+T TK+F+ ILR + FP L +GASSV ++ +VD+AFAC FVSST CD A+V+RT+ LGM+SIPGVSTPAQA AVQAGG I+K +P+ +VS R IV ++ +S +PV+ISGGVE QL+AY SGASGFAVGRTLFEPE + AEI +A CF+ Sbjct: 61 ISIAVLRDVQLERAVEVVRALYEEGFNMISVTADTKNFSKILRSIPRSFFPDLLLGASSVTTLDEVDVAFACAVNFVSSTSCDPAIVKRTRDLGMVSIPGVSTPAQAASAVQAGGGILKVYPATNVSPNQCRDIVNAIKTSNIPVVISGGVEPDQLQAYVKSGASGFAVGRTLFEPEKSSAEIADRARCFL 251
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: A0A2A4ZAB4_9PROT (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=OCS116 cluster bacterium TaxID=2030921 RepID=A0A2A4ZAB4_9PROT) HSP 1 Score: 118 bits (295), Expect = 1.100e-27 Identity = 67/209 (32.06%), Postives = 119/209 (56.94%), Query Frame = 2 Query: 176 PAVINATRQQPVPQNIFIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKD---FAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFIS 793 P +NA + +P I +LR V+ D E+ARA+++ G + + I ++ + IL+ G + IGA +V V+QV+ A G R + S + ++AV++R+K+LG+ S PG TP++A A++AG D++K FP+ + T + I +P +P+ GGV V + + A GASGF +G L++ MT+ ++ + A +++ Sbjct: 3 PITLNAAMAE-IP---LIAILRGVKPDEVLEIARAIFQAGIKTIEIPLNSPEPYKSIEILQQAMGDE---AVIGAGTVTKVEQVEKIHAVGGRLIVSPNTNIAVIKRSKQLGLYSAPGFYTPSEAFAAIEAGADVLKMFPADTLGTAGLKAISVVLPPDMPIFPVGGVNVDNMADFIAVGASGFGLGSGLYKAGMTVEQVXSNAQAYVN 204
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: UPI001C820DB3 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Noviherbaspirillum aridicola TaxID=2849687 RepID=UPI001C820DB3) HSP 1 Score: 115 bits (287), Expect = 1.400e-26 Identity = 65/196 (33.16%), Postives = 103/196 (52.55%), Query Frame = 2 Query: 203 QPVPQNIFIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFI 790 QP P + I +LR + A +V R L+ GFRM+ + + +R + P IGA +V V+ V+ A G R + S HC V+ +LGM+++PGV+TP +A A++AG +K FP++ V F+ I +P SVP+ GG+ + Y+ASGA GF +G L++P + + A F+ Sbjct: 6 QPFPMPL-IAILRGLSPAEAPQVGRVLFDAGFRMLEVPLNRPGAIEAMRALLQIAPPDAVIGAGTVLGVEDVEAVRAAGGRLIVSPHCAEDVIAHASRLGMLTLPGVTTPTEAFLALRAGAHGLKIFPAEMVPPSAFKAIKSILPPSVPMFPVGGITPQNMAEYAASGADGFGIGGQLYKPGCSETTLRDNAQAFM 200
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: A0A0D6J0M2_ECOLX (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=156 Tax=Enterobacteriaceae TaxID=543 RepID=A0A0D6J0M2_ECOLX) HSP 1 Score: 114 bits (286), Expect = 1.860e-26 Identity = 62/198 (31.31%), Postives = 105/198 (53.03%), Query Frame = 2 Query: 224 FIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFA---AILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFISGGRQI 808 + +LR V+ D + LY GFR++ I ++ + ++LR +D +GA +V SV+QV G + + HCD AV+RR + LGM PGV+TP +A A++ G + IK FP++ ++ E + +P SVP++ GG+ + Y + GA+GF +G L+ P MT ++ A F++ + Sbjct: 12 LVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALPKD---CLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGITPETMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNL 206
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: UPI001C65D62E (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Shewanella sp. FJAT-51860 TaxID=2864212 RepID=UPI001C65D62E) HSP 1 Score: 114 bits (286), Expect = 1.910e-26 Identity = 60/193 (31.09%), Postives = 108/193 (55.96%), Query Frame = 2 Query: 224 FIVVLRDVQLDRAQEVARALYKGGFRMMSITTHT----KDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFI 790 I +LR V+ + EV LY+ GF+M+ + ++ K + +H + + + IGA +V SV+QV G + + S + D V+ +KKL ++S+PGV+TP++A A +AG D IKAFP ++++ + +P +P+ GG+E+ +E Y SG GF +G +L++P + + ++ A F+ Sbjct: 13 LIGILRGVRPEEVVEVVNVLYESGFKMVEVPLNSPEPYKSIELLTKHFSDR----MLIGAGTVLSVEQVHRVAQAGGKLIVSPNIDAEVIIESKKLHLVSVPGVATPSEALQAYKAGADAIKAFPCDSITSKGIKSWRSVLPKDLPIYAVGGIELANMEEYWNSGCDGFGLGSSLYKPGVAIEDLHRIATSFV 201
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: A0A8I1LF90_9DELT (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=3 Tax=Desulfofustis sp. PB-SRB1 TaxID=1385624 RepID=A0A8I1LF90_9DELT) HSP 1 Score: 114 bits (284), Expect = 3.600e-26 Identity = 62/189 (32.80%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 224 FIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFI 790 FI + R V+ A+ V A+ GGFR++ ++ D + + IGA +V +V Q G + S HCD A++R TK+ G+ISIPGV+TP +A A+ AG D +K FP++ ++ + +P +++ GG+ + Y GASGFAVG +L+ P ++ +I A+A F+ Sbjct: 13 FIAITRGVEPHEAEAVGAAICSGGFRVIENPLNSPDPCRSIEIMGRVLASRALIGAGTVTTVDQGGHGQKAGGSLIISPHCDPAIIRATKEAGLISIPGVATPTEAMTALAAGADALKLFPAEIITAQAVGAFRVVLPPETVLLVVGGITPNNWQPYLQKGASGFAVGSSLYAPGRSIGDITARAAAFV 201
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: A0A7S3AJ42_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJ42_9EUKA) HSP 1 Score: 114 bits (286), Expect = 5.640e-26 Identity = 68/198 (34.34%), Postives = 108/198 (54.55%), Query Frame = 2 Query: 260 AQEVARALYKGGFRMMSITTHTKDFA-------AILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKA-----CCFISGGRQIPWA 817 A +V AL G ++ + D A++ V G+ +GA +V V+QV A GA+ + S + D AV+ TK G++S+PGV TP +A A+ AG D +K FP+ +S + F+ ++ +PSSVPV+ GGV+V + + +GA GF VG +++P +T A++E KA C ++ GR P A Sbjct: 7 AAQVGLALVSAGIEILEVPLRGADLVGALESVRALVAAVGGRAM----VGAGTVLRVEQVAEVAATGAQLIVSPNMDPAVIAATKAAGLLSLPGVFTPTEAFQAINAGADALKWFPTDGMSPKSFKAMLAVLPSSVPVLAVGGVDVGNIACWRTAGARGFGVGSAIWKPGLTAAQVEGKASVFVRACEVACGRAAPLA 200
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: A0A2A4Z2S0_9PROT (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=OCS116 cluster bacterium TaxID=2030921 RepID=A0A2A4Z2S0_9PROT) HSP 1 Score: 113 bits (282), Expect = 7.320e-26 Identity = 61/195 (31.28%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 224 FIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFISGGRQI 808 + ++R V+ D VA A+ GF+++ + ++ +R +A + IGA +V S VD A G RFV S + ++AV++RTK+LG+ S+PG TP++A A+ AG D +K FP+ + + + I +P +VPV GGV + + AY A+GA+GF +G +++ M ++ A + ++ Sbjct: 15 LVAIIRGVKPDEVLAVATAIKNAGFQLIEVPLNSPQPYESIRIMADALGDEILIGAGTVTSQDHVDRVHAAGGRFVVSPNTNIAVIKRTKQLGLYSVPGFYTPSEAFLAIDAGADALKMFPADTLGVKGLKAISVVLPDNVPVFAVGGVNIDNMAAYVAAGAAGFGLGSGVYKVGMAAEQVYNNAKAHVDAYNKL 209
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: UPI001B151FE4 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=UPI001B151FE4) HSP 1 Score: 111 bits (278), Expect = 2.540e-25 Identity = 62/199 (31.16%), Postives = 106/199 (53.27%), Query Frame = 2 Query: 206 PVPQNIFIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMTLAEIEAKACCFISGGR 802 P+P F+ +LR + + A V L G R + + ++ + +A + IGA +V S VD G R + S + + V+RRTK+LG++S+PG++TP++A A++AG D +K FP++ + + + +PS +PV GG+ L A+ +GA GF +G LF P + LAE++ +A + R Sbjct: 10 PMP---FVAILRGLAPEDAPSVGETLVGAGLRCIEVPLNSPRPLESIAALADAAHESVLIGAGTVLSPADVDSVAQAGGRIIVSPNMNPRVIRRTKELGLLSLPGIATPSEAFAAIEAGADGLKLFPAEMHNPAVLKAMKAVLPSDIPVFAVGGIGPDNLTAWRRAGADGFGIGSALFRPGIALAELDERAKALTAAWR 205
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Match: A0A1H7TIB6_9SPHI (2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Parapedobacter koreensis TaxID=332977 RepID=A0A1H7TIB6_9SPHI) HSP 1 Score: 111 bits (277), Expect = 3.620e-25 Identity = 67/200 (33.50%), Postives = 108/200 (54.00%), Query Frame = 2 Query: 209 VPQNIFIVVLRDVQLDRAQEVARALYKGGFRMMSITTHTKDFAAILRHVAGQDFPGLTIGASSVCSVQQVDLAFACGARFVSSTHCDVAVVRRTKKLGMISIPGVSTPAQARGAVQAGGDIIKAFPSKDVSTECFRGIVESVPSSVPVIISGGVEVVQLEAYSASGASGFAVGRTLFEPEMT-----LAEIEAKACCFIS 793 + +N I ++R ++ + EVA ALY GG R++ +T ++++ ++ +AG + IGA +V Q V+ A A GARF+ S DV V++ TK L +SIPG TP + A + G DI+K FP+ S R I P +P++ SGG+ + + +GA F VG TL + + LA++ KA F++ Sbjct: 7 IKENGIIAIIRGLRPEHVLEVAEALYAGGIRILEVTMNSEEPLVAIKTLAGGIGDRMVIGAGTVLDTQMVEAAVAAGARFILSPVVDVDVIKTTKDLDAVSIPGAFTPTEIYAAHKGGADIVKVFPA--TSPAYIRSIAGPFPQ-IPLLPSGGLTPQNIRDFKDAGAVAFGVGNTLIDTTQSITRDYLAQLTDKASQFVA 203 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig603.14565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig603.14565.1 >prot_L-elsbetiae_contig603.14565.1 ID=prot_L-elsbetiae_contig603.14565.1|Name=mRNA_L-elsbetiae_contig603.14565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=274bp MVVHPRLVLLCVGALAHVVRCFLHFPAAAVAVNSPRHARCRSLEGRRRHVback to top mRNA from alignment at L-elsbetiae_contig603:25518..26957+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig603.14565.1 ID=mRNA_L-elsbetiae_contig603.14565.1|Name=mRNA_L-elsbetiae_contig603.14565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig603:25518..26957+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig603:25518..26957+ >mRNA_L-elsbetiae_contig603.14565.1 ID=mRNA_L-elsbetiae_contig603.14565.1|Name=mRNA_L-elsbetiae_contig603.14565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1644bp|location=Sequence derived from alignment at L-elsbetiae_contig603:25518..26957+ (Laminarionema elsbetiae ELsaHSoW15)back to top |