mRNA_L-elsbetiae_contig603.14562.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig603.14562.1
Unique NamemRNA_L-elsbetiae_contig603.14562.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: D8LJ20_ECTSI (Mitochondrial carrier protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ20_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 5.350e-128
Identity = 206/311 (66.24%), Postives = 238/311 (76.53%), Query Frame = 1
Query:  223 SLQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQ----------LSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHLGV-AMSAPAAATANVKREQ 1122
            SL+SARPHL A AVAR  SI+ GYPLDTIKTRLHLGR+    S+PD+YRGLGSSL GQVPYGMLTFGTYELYKTALL RFP++P+A+TFC AA+LGDMTGSLWLVPSEVVKVQMQGG+H+++ +A +SIF+++G GGFYQGFSGQ+GRDVPFRA+QLTSYELLR +L   R                           +            LSSGDAAL+GG+AGAISATFTCPLDV+RTRLMVGG GG A+ W  AIKAG L SGLGTRV Y+GTSSAVFFVVYEA+K  LGV A S+P AAT+  KR+Q
Sbjct:   45 SLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLKTWRRRQHTGVATERGDDSGGVPVGRARGGVATAAAGDDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAAIKAGGLLSGLGTRVFYIGTSSAVFFVVYEAIKVRLGVVAASSPPAATSKAKRQQ 355          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S1BAX9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAX9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 8.230e-62
Identity = 134/289 (46.37%), Postives = 165/289 (57.09%), Query Frame = 1
Query:  235 ARPHLAAGAVARFFSISVGYPLDTIKTRLHLGR--------SFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGS--GGGAKNWRGAIKAGS----LFSGLGTRVLYVGTSSAVFFVVYEAVK 1059
            AR HLAA AVAR  SI V YP+DT+KTR+ +G          F + +   +Y+GL  SLVGQVPYG+LTFG+YE+YK A L R P  P A+ +  AAILGD TGS WL PSEVVK Q+QGG+HSS   A   I+ R GFGGFYQG+ G L RDVPFR  QLTSYE+ + +    +                             +LSS DAA+ G VAG  SA  T PLD ++T LM  G+       N    I        LFSG+  RV Y+  S A+FF+VYE V+
Sbjct:  103 ARKHLAAAAVARAVSIFVMYPVDTVKTRIQMGEPILGGVGTKFSIAAA-GMYKGLDGSLVGQVPYGVLTFGSYEVYKQAFLKRLPAAPPALLYAFAAILGDTTGSFWLCPSEVVKQQIQGGMHSSTLAAARDIYSRQGFGGFYQGYFGGLARDVPFRVAQLTSYEVAKSVYLRMKTRKRRETEPEGER--------------KVELSSIDAAICGAVAGTFSAGITAPLDRIKTLLMTDGAKYSNSVANCASTIFKNEGVTGLFSGIVPRVAYIAPSVALFFIVYERVQ 376          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S2SIM3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIM3_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.210e-59
Identity = 126/288 (43.75%), Postives = 170/288 (59.03%), Query Frame = 1
Query:  226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGG-------AKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068
            ++ AR HLAA AVAR  SI   YP+DT+KTR+ + +   +  L  LY G+G SLVGQVPYG+LTFG+YE+YK  LL +FP+V     +  +A+LGD+TGS WL PSEVVK +MQ G++S+  +A   I K+ GFGGFY+G+ G L RDVPFR  QLTSYE+ +K+    +                           + +LS G++A VG +AG+ SA  T PLD ++T LM   +  G       AK WR    AG    GL  RV+Y+  S  +FF+ YE V+  L
Sbjct:   56 IKDARRHLAAAAVARATSIFTMYPMDTMKTRIQMEQPNAL-RLKGLYSGVGGSLVGQVPYGVLTFGSYEVYKNTLLEKFPDVRPVFLYAISAVLGDVTGSGWLCPSEVVKQKMQAGMYSTTGEAIREIIKKKGFGGFYEGYFGGLARDVPFRVAQLTSYEVSKKIFLQMKRKKQQQNEGESSSIE------------NLRLSPGESAAVGAMAGSFSAAITSPLDRIKTLLMTDSAAYGGSVASCAAKIWREEGIAG-FCQGLVPRVIYIAPSVMIFFIAYEQVQQRL 329          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S2K4Y9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4Y9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 3.750e-56
Identity = 118/266 (44.36%), Postives = 156/266 (58.65%), Query Frame = 1
Query:  238 RPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVP-SLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGS--GGGAKNWRGAIK----AGSLFSGLGTRVLYV 1014
            R HLAA A AR  SI   YP+DT+KTR+ +G +F+       + +G+  SLVGQVPYG+LTFG+YE+YK  LL +FP V     +  AAILGD+TGS W+ PSEV+K QMQ G++ +   A  SI+ ++G GGFYQG+ G L RDVPFR  QLTSYE+ +K+  N R                             +LS+ D+A+VG VAG  SA  T PLD ++T LM  GS  GG       +I      G LF+G+  RV+Y+
Sbjct:   26 RGHLAAAAAARCTSIFTMYPIDTLKTRMQMGNTFKESVQKGGIMKGVSGSLVGQVPYGVLTFGSYEVYKEMLLKKFPNVRPVFIYAMAAILGDVTGSGWVCPSEVIKQQMQAGMYPTTGDAIRSIWSKSGLGGFYQGYMGGLARDVPFRVAQLTSYEVAKKVFLNYRKRQDESVK---------------------ELSAVDSAVVGAVAGTFSAAITAPLDKIKTLLMTEGSKYGGSVMQCASSIVQAEGVGGLFAGVVPRVVYI 270          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S0C337_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C337_9STRA)

HSP 1 Score: 199 bits (506), Expect = 9.140e-54
Identity = 117/284 (41.20%), Postives = 159/284 (55.99%), Query Frame = 1
Query:  226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKA------GSLFSGLGTRVLYVGTSSAVFFVVYEAVK 1059
            L+ +R +L A AVAR  SI   YP+DTIKTR+ +G+   +     +Y+G+G SL GQVPYG+LTFG+YE+YK  LL +FPE   +V +  AA+LGD+TGS WL PSEVVK Q+QGG+++S  +A  +I+   G GGFYQG+ G L RDVPFR  QLTS+E+ +      +                              LS+ ++A VG V G  SA  T PLD ++T LM   +  G      A K         +F G+  RV Y+  S  +FF  YE V+
Sbjct:   91 LKESRKYLVAAAVARSVSIFGMYPVDTIKTRMQMGQPMGLRD--GIYKGVGGSLFGQVPYGVLTFGSYEIYKKKLLEKFPETSPSVLYAFAAVLGDITGSGWLCPSEVVKQQLQGGMYTSTREAVSAIWSTKGIGGFYQGYIGGLARDVPFRVCQLTSFEVTKNSYLRLKRKRSGMSEDA-----------------ELTLSAAESAAVGAVCGTFSAAVTTPLDRIKTLLMTDSANYGGTVISCATKIIKDEGISGMFKGIVPRVAYIAPSVVIFFTAYEQVQ 355          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A7S1GKZ5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKZ5_CYCTE)

HSP 1 Score: 196 bits (497), Expect = 3.980e-53
Identity = 118/291 (40.55%), Postives = 161/291 (55.33%), Query Frame = 1
Query:  226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKM---LGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGG-------AKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068
            ++ AR HL A  VAR  SI   YP+DTIKTR+ + +   +  L  LY G+  SL GQVPYG+LTFG+YE+YK AL  +FP +   + +  AAILGD+TGS WL PSEVVK QMQ G+ ++  +A  +I+++ G  G YQG+ G + RDVPFR  QLTSYEL + +   +  RR                             +LS+ DAA  G ++G  SA  T PLD ++T LM   +  G       +K W     AG   +GL  RV Y+  S  +FF+ YE V+  +
Sbjct:   28 IKEARRHLTAAGVARSVSIFAMYPIDTIKTRMQMDQPNPL-RLNGLYNGVAGSLFGQVPYGVLTFGSYEMYKKALTDKFPSIRPVLVYALAAILGDLTGSFWLCPSEVVKQQMQAGMFATTGEAIRAIWQKQGLAGLYQGYLGGVARDVPFRVAQLTSYELTKSLYLRIKKRRLPQQKGKKAVAP---------------KLELSAFDAAACGALSGTFSAAITTPLDRIKTLLMTNSAAYGGSVLSCASKIWSDEGVAG-FTAGLLPRVTYIAPSVVIFFIAYEQVQQRM 301          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A5J4YTC7_PORPP (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTC7_PORPP)

HSP 1 Score: 196 bits (498), Expect = 1.730e-52
Identity = 120/313 (38.34%), Postives = 170/313 (54.31%), Query Frame = 1
Query:  226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHL---GRSFRVPSLPD------LYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKA----------GSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHLGVAMSA--PAAAT 1101
            ++ AR HLAAG VAR  S+ V +P+D+IKTRL     G    + ++        ++ G+G SL GQ+PYGMLTFG YE YK  L  +FP +P  +     A LGD+TGSLWL P+E +K  +Q G+H S+ +A    +K  G  GFYQG+SGQ+GRDVPFR +QL+ YE ++ M                                  +  + D  ++G +AG+IS+  T PLDV++TRLM    GG A+ ++ A+            G L  G+  RV+Y+  S A+FF VYEA    +    +A  P+AAT
Sbjct:   43 VRDARDHLAAGGVARGVSVLVMHPVDSIKTRLQAAAPGAGAPIDAVKAFLASGRVFAGVGISLFGQIPYGMLTFGAYEAYKEVLAQKFPAMPSELRVMLGACLGDLTGSLWLCPAERIKQTLQSGVHGSVLEAVRKTYKNGGLPGFYQGYSGQIGRDVPFRIIQLSVYEKIKAMYARAYLKER-------------------------EAVTTDNLIIGALAGSISSVLTAPLDVIKTRLMTD-QGGSARVYKNALDCVVKIVRAEGPGVLARGVVPRVIYITPSVAIFFAVYEATLRFIRNRRAAADPSAAT 329          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: A0A1Z5K5K0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5K0_FISSO)

HSP 1 Score: 194 bits (494), Expect = 3.100e-52
Identity = 117/293 (39.93%), Postives = 165/293 (56.31%), Query Frame = 1
Query:  226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRS--FRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKM---LGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGG-------AKNWRGAIKAGSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068
            ++ +R  L A A AR  SI   YP+DT+KTRL + ++  FR   L  LY+G+  SL+GQVPYG+LTFG+YE+YK ALL +FP     + +  +A+LGD+TGS WL PSEV+K Q Q G++ S ++A + I ++ G  G YQG+ G + RDVPFR  QLTSYE+ +     + +RR                             QL + ++A+ G +AG+ SA  T PLD  +T LM   +  G       +K WR    AG    G+  RV Y+  S A+FF+VYE V+  L
Sbjct:   71 IRDSRRDLLAAAAARCSSIFSMYPVDTLKTRLQMEQANPFR---LEGLYKGVAGSLIGQVPYGVLTFGSYEMYKKALLNKFPNTKPVLLYAFSAVLGDLTGSGWLCPSEVIKQQTQAGMYKSTAEAFMGILRKKGIKGLYQGYFGGIARDVPFRVAQLTSYEVTKSFYLRIKSRRAKSASKSVKGKSTNE------------KIQLDAAESAICGAIAGSFSAAITAPLDRFKTLLMTDSAAYGGTVLSCASKIWRDEGIAG-FAKGVVPRVTYIAPSVAIFFIVYEQVRQRL 347          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: B8CE79_THAPS (Mitochondrial carrier protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE79_THAPS)

HSP 1 Score: 187 bits (476), Expect = 6.610e-51
Identity = 112/265 (42.26%), Postives = 153/265 (57.74%), Query Frame = 1
Query:  292 YPLDTIKTRLHL--GRSFRVPSLPDLYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGS---GGGAKNWRGAIKA----GSLFSGLGTRVLYVGTSSAVFFVVYEAVK 1059
            YP+DTIKTR+ +  G ++RV  L   Y G+  SLVGQVPYG+LTFG+YE+YK +LL RFP V     +  +AILGD+TGS WL PSEV+K Q+Q GI+ ++ +A   I+K++G  GFYQGF+G L RDVPFR  QLT++E+ + +    +                           S  LS  +AA+ G  AG+ SA  T PLD ++T +M   +   GG        I      G LF+G+G RV Y+  S  +FFV YE V+
Sbjct:    2 YPIDTIKTRMQMRQGNAWRVKGL---YSGVMGSLVGQVPYGVLTFGSYEIYKQSLLTRFPNVKPTFIYALSAILGDITGSGWLCPSEVMKQQLQAGIYGNMGEAVRGIWKKSGLRGFYQGFTGGLARDVPFRVAQLTTFEVTKSIYLRAKRSNNKDND-------------------SIALSPLEAAICGAAAGSFSAAITNPLDRIKTLMMTDTTNAYGGSVVACASKILRDDGIGGLFAGVGPRVGYIAPSVCIFFVTYELVQ 244          
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Match: M2Y040_GALSU (Mitochondrial carrier (BOU / S-adenosylmethionine carrier) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y040_GALSU)

HSP 1 Score: 189 bits (481), Expect = 1.550e-50
Identity = 126/302 (41.72%), Postives = 162/302 (53.64%), Query Frame = 1
Query:  226 LQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVP----------SLPD-LYRGLGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTGSLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDVPFRALQLTSYELLRKMLGNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKAG----------SLFSGLGTRVLYVGTSSAVFFVVYEAVKTHL 1068
            L  AR HL +GAVAR  S+   YP+DTIKTRL L  S  V           S P  LY G+ S+L+GQVPYGMLTFG+YE+YK+ L G        +    AAI+GD+TGSLWL PSEVVK ++Q G +S+   A   IF   G  GFYQG+ GQ+ RD+PFRA+QL SYE LR      +                              LS+ +  ++G V+G+++A  T PLDVL+TRLM    G     +  A              + + GLG RV Y+G S A+FFVVYE +K  L
Sbjct:   56 LYRARIHLLSGAVARGVSVFAMYPIDTIKTRLQLETSRGVANYWHSLRKALSKPKYLYWGVVSTLIGQVPYGMLTFGSYEIYKSWLTGSL-RASSRLVIVLAAIMGDLTGSLWLCPSEVVKSRLQAGQYSNTLDAIRKIFMTQGLKGFYQGYVGQIARDIPFRAIQLLSYEELRWRYRQWKKLSSIE-----------------------DLSNIENLVIGLVSGSVTAAVTTPLDVLKTRLMTQPIGVSTIAYSSAWDCARQLVQHEGLQAFWKGLGPRVFYIGPSGAIFFVVYEGMKRML 333          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig603.14562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ20_ECTSI5.350e-12866.24Mitochondrial carrier protein, putative n=2 Tax=Ec... [more]
A0A7S1BAX9_9STRA8.230e-6246.37Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2SIM3_9STRA1.210e-5943.75Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2K4Y9_9STRA3.750e-5644.36Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S0C337_9STRA9.140e-5441.20Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1GKZ5_CYCTE3.980e-5340.55Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A5J4YTC7_PORPP1.730e-5238.34S-adenosylmethionine carrier 1, chloroplastic/mito... [more]
A0A1Z5K5K0_FISSO3.100e-5239.93Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8CE79_THAPS6.610e-5142.26Mitochondrial carrier protein n=1 Tax=Thalassiosir... [more]
M2Y040_GALSU1.550e-5041.72Mitochondrial carrier (BOU / S-adenosylmethionine ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig603contigL-elsbetiae_contig603:4374..9131 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score395.2
Seed ortholog evalue3.2e-107
Seed eggNOG ortholog2880.D8LJ20
KEGG rclassRC00017,RC00425
KEGG koko:K05857,ko:K14684,ko:K15111
KEGG TC2.A.29.18,2.A.29.23
KEGG ReactionR03332,R03435,R10952
KEGG Pathwayko00562,ko01100,ko04020,ko04070,ko04919,ko04933,map00562,map01100,map04020,map04070,map04919,map04933
KEGG ModuleM00130
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
EC3.1.4.11
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko04131
Ec32 ortholog descriptionMitochondrial carrier protein, putative
Ec32 orthologEc-20_002340.1
Exons5
Model size2232
Cds size1053
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816657.7560952-UTR-L-elsbetiae_contig603:4373..44451622816657.7560952-UTR-L-elsbetiae_contig603:4373..4445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig603 4374..4445 +
1691683718.1690814-UTR-L-elsbetiae_contig603:4373..44451691683718.1690814-UTR-L-elsbetiae_contig603:4373..4445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig603 4374..4445 +
1622816657.8227768-UTR-L-elsbetiae_contig603:8024..91311622816657.8227768-UTR-L-elsbetiae_contig603:8024..9131Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig603 8025..9131 +
1691683718.2302966-UTR-L-elsbetiae_contig603:8024..91311691683718.2302966-UTR-L-elsbetiae_contig603:8024..9131Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig603 8025..9131 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816657.7664645-CDS-L-elsbetiae_contig603:4445..46631622816657.7664645-CDS-L-elsbetiae_contig603:4445..4663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 4446..4663 +
1691683718.1817153-CDS-L-elsbetiae_contig603:4445..46631691683718.1817153-CDS-L-elsbetiae_contig603:4445..4663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 4446..4663 +
1622816657.775894-CDS-L-elsbetiae_contig603:5049..52241622816657.775894-CDS-L-elsbetiae_contig603:5049..5224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 5050..5224 +
1691683718.1903968-CDS-L-elsbetiae_contig603:5049..52241691683718.1903968-CDS-L-elsbetiae_contig603:5049..5224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 5050..5224 +
1622816657.7868953-CDS-L-elsbetiae_contig603:6705..68071622816657.7868953-CDS-L-elsbetiae_contig603:6705..6807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 6706..6807 +
1691683718.1995683-CDS-L-elsbetiae_contig603:6705..68071691683718.1995683-CDS-L-elsbetiae_contig603:6705..6807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 6706..6807 +
1622816657.799092-CDS-L-elsbetiae_contig603:7086..71761622816657.799092-CDS-L-elsbetiae_contig603:7086..7176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 7087..7176 +
1691683718.2108665-CDS-L-elsbetiae_contig603:7086..71761691683718.2108665-CDS-L-elsbetiae_contig603:7086..7176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 7087..7176 +
1622816657.8100972-CDS-L-elsbetiae_contig603:7556..80241622816657.8100972-CDS-L-elsbetiae_contig603:7556..8024Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 7557..8024 +
1691683718.2201548-CDS-L-elsbetiae_contig603:7556..80241691683718.2201548-CDS-L-elsbetiae_contig603:7556..8024Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig603 7557..8024 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig603.14562.1prot_L-elsbetiae_contig603.14562.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig603 4446..8024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig603.14562.1

>prot_L-elsbetiae_contig603.14562.1 ID=prot_L-elsbetiae_contig603.14562.1|Name=mRNA_L-elsbetiae_contig603.14562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
MVRPSTSSPASHLYFFHPPLLLLITLGSLVMSSTSKVDVCSSAAPDSVWA
SLQSARPHLAAGAVARFFSISVGYPLDTIKTRLHLGRSFRVPSLPDLYRG
LGSSLVGQVPYGMLTFGTYELYKTALLGRFPEVPQAVTFCAAAILGDMTG
SLWLVPSEVVKVQMQGGIHSSISKATLSIFKRAGFGGFYQGFSGQLGRDV
PFRALQLTSYELLRKMLGNRRKRQQEAALAAGEPQGRAAAAGAANGGGSF
QLSSGDAALVGGVAGAISATFTCPLDVLRTRLMVGGSGGGAKNWRGAIKA
GSLFSGLGTRVLYVGTSSAVFFVVYEAVKTHLGVAMSAPAAATANVKREQ
*
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mRNA from alignment at L-elsbetiae_contig603:4374..9131+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig603.14562.1 ID=mRNA_L-elsbetiae_contig603.14562.1|Name=mRNA_L-elsbetiae_contig603.14562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4758bp|location=Sequence derived from alignment at L-elsbetiae_contig603:4374..9131+ (Laminarionema elsbetiae ELsaHSoW15)
GGAACACAGAACAATTTGTGTTTGTACGCAGCGTGCCACCGTTTCCTCTG TGCTACCGTCCCTCGGGCCCCGATGGTACGCCCCTCAACTTCATCACCAG CATCGCACTTGTATTTTTTTCACCCTCCGCTTCTCCTGTTGATCACACTC GGTTCGCTCGTGATGTCGTCTACGTCCAAAGTCGATGTTTGTTCCTCGGC CGCGCCCGACTCGGTCTGGGCCTCCCTGCAGTCTGCCAGGCCTCACCTAG CTGCTGGTGCGGTGGCAAGGTTCTTCAGCATTTCTGTCGGGTAAGTCCGT GAGCGCGAGCGTTTTTGCTGCTGCACGTACGTATGTGCTGTGTCGTCAAA TGCCACTGTTATACAGCGCGTCTAGACTAATAGCAGCAGTCTGTGTAGAA GTTGAAGTGTATGTGACGGTACGAGTCTGTGCTGATGCATTGTTGACTTG GCAGAAGGTCGGGTCCTTGTCGTCAGCTCGATGGGAGTCCTTGAGAAGAT GTTCGCTCCTGTGTGCATACGGCACATACACGTCATTATGTTCTTGCACG CTGGACCATGTCGGCGCGCCTCCGAAAAATGAAAAATCATCCCCTGTACT AAACTAGTGTTGTACGCCTTTCCCGTCGTTCCACTTTGTTTTCCCGCCCG CGGCCGTCATCCGTGTGCCCTCCCAGCTATCCATTAGATACGATCAAGAC ACGATTGCACCTCGGCAGATCCTTCAGGGTGCCATCGCTTCCGGACCTTT ACCGAGGGCTAGGAAGCTCTTTAGTTGGGCAGGTCCCGTACGGCATGCTG ACCTTCGGGACATACGAGCTCTACAAGACGGCTTTGCTGGGGAGGTTCCC GGTGAGGCACGCGCAGGCGATGGTCCCTGCCTATCTGCGAGTCAGTGCCA CTTTTTCGGCGCCGTCCGCGGCTTCGTTGTTTGTCGCGGCAATCTACATA GGAGCGTATGTATATACGAAAAGTATGACGCGTTTCGTAGCAGTTCACAT CACCGCGGCTGGCGTACTTGATAAGGTGGTCAACGCGTCGACGATAAGGC GGGGGTTAGGCATGTGGGTACAAATTAAGAGGTCTTCTCCAAAAGGCTAG AGCGCCTAAGCATCTACAGATGCCTACAGAGGTGCATGCGGGACACCTCA GCACATGGTATACTATCCAGGCACAACAATACGGCAGGATTGATGCGACC GCAGCAGCCGTCCGAGGAAAAAGGGTAGGGACATAGATAGAGTTTGTTAG GTGCGGGGCACATTCTCGTGCTGGCTTCTTCGAAGCAGGCCCTACACACT GAAGCAAAATTTATCTTCTCGAAAATAAGCGCAAGCGGATTGACTCTCAC GGGTGTTTTCTCCGTCGACGCCCGTGGCACTTTCACGAAAAATCGGCGCG AGCGCTGAAGAGAAAAATACATATGGTACATAATGACGTTGCTTCGAATT TCTGCATCAACGATCAGTCTTAAGAAGGGTCCGATCCTTTCGCAGCAACC GAAACTACTCCCCACAAGAAACATCCTGGATTGCTATTGCTACGCTAGCA CAGTCAGTAATAGCAGTGCCTACGGATTTTTTTAGCCCTTGGCGCTTCCC GCTGAAGCCGGACGGCTGGACACACAACGCCACGTAGAATGCCAGGAGAG AGCCAGGTATGAACTCAAATTGACCGTCAGAGGAGGTGTCCAACAGGGAC GTTTCTCGGATTCGAGAGGCAGCGTGTCCGGATGTTCCAAGAAACTCGCG CTGGAGTGTTCTTCCATGCAGCCCAACGCCCCCCGCGGGTTGCGCTGCCT CTCGGCCTCTTGTTGTGTTCGTTAGATGGGCTTATCCACACTATACCACT CGGTGCTTATACAAACAAGTCCATCTCACGCCCGTATTCTCTCGTTCGCC CCGTTCCGTAGGAATCTGGGTTGGTTCTTCAGCGTGTTTCTGTTCTCGCG TCGAGTACGTGTTTGCCCCGCTTGCTCTGGGATAGTGTTCGTTCCTCTTC TCGCCGTCACGAGTGAGACCAACTGTGTACTCCACATCGCACGCACATGA ACAATAACAACTCAGTAGAAGCTGGGTCGCAACATGTTCGTACGGGAGTG GACGGCAGGACATACTTGTAGATACATGCGTGTCGGTCTACGAAACGAGC GCTCTCTTTGTGAGTACGGCGTATAAATACGTGTGCCGAAATATTCTTGT TCCATGAAATACGCGGGGTGTGAGGTGCGAGGTCGGTTAAAGAGGTGACG CCTCAACCGCCTGTGCGCTCTGAACACCCGCCCTACTGACTCTTTTGCGC CATTTTACGCGCCGACGATAACGTCTCCTCAGGAGGTTCCGCAGGCGGTC ACCTTCTGCGCGGCTGCGATTCTTGGAGACATGACCGGCAGCCTTTGGCT TGTGCCTTCCGAGGTGGTCAAGGTTCAAATGCAGGTAGGTGAACAAGCCA TCTTCACCCTAAATACCGCCACCATAATGGTACTTGTTCCGTGCATATGT GCATCCCACCGAATCCTGCGGACGTTTTCTAACGTTTGGTCGGGGCTTCC CAGGCCAATTTGTTTTTGTGTGCCGAATCTCGAAATGCCTAGGTATCTAT TTGGTGATATCGTGGCGATGTCGCTGTGCACGGTACCAACAGATTGTTCC AATAAATCAGTACTTCCTGCACCTCCCTACATGTCCGATTCGGCCGTTTG CCCCCCCCTACAGGGAGGAATCCACTCAAGCATCTCTAAGGCTACGCTCT CGATCTTCAAGAGGGCAGGCTTCGGTGGCTTCTACCAGGGATTTAGCGGC CAGGTAACTATAACTTCGTACTTATAGTACTAGGGCGGCGCTTATTTGCG CGTTGTTCGTGGACCGTTTGCTGGCACTGCCTAGTATTAGCACTTCACAC ACCGAGTCAAGCACGCCCACCGCGCGATCCTTTGACCAAAGATTCGCCCT CACCCGCACACCTCGGCATCACAACACGAGCGAAAAGAGCGACCCCTGTC GACTTTTCCGCCACCTGCCACCCTGCTCCCCACGGTACCACAGGGTCGTC TCACTTGCTGTCCCTTCTCCTCCCCCTCTCTTCCTCCCTCGGTGCTTTGT TCCATGTCACGGCGCATGGAACCCTCTTATGTATGACCTCTATTGTACCT GCTGCTGTTTGACGCGGATGTATCTCCCCGCAGCTGGGCCGCGATGTTCC CTTTCGGGCACTCCAGCTCACCTCTTACGAACTGCTGCGAAAGATGCTCG GGAATCGCCGAAAACGGCAGCAGGAAGCCGCTCTTGCAGCGGGCGAACCT CAGGGCCGCGCCGCCGCCGCCGGCGCTGCCAACGGAGGAGGCAGTTTTCA ACTCTCGTCGGGAGATGCCGCCTTGGTGGGAGGCGTCGCGGGAGCAATCA GCGCGACGTTCACCTGCCCGCTCGACGTCCTCAGGACCCGTCTGATGGTG GGCGGCAGCGGAGGAGGGGCGAAAAACTGGAGGGGCGCGATCAAGGCTGG CAGCTTGTTTTCCGGGCTGGGCACTCGCGTGCTCTATGTCGGAACGTCGA GCGCCGTTTTCTTTGTCGTGTACGAAGCCGTCAAGACGCATCTCGGGGTG GCCATGTCGGCCCCGGCGGCAGCGACTGCCAACGTCAAGCGAGAACAGTG ACTTGAACCCGGTCGTTGCGTCCATGGCGGCCGGATTGTGTATGCTTGTG TCCAGTCACGTGTGGCGTGAAAGCTGCAGAAGAGCGTGGGACACAAGCGC AGTACCGAGTATTATACTCCGTGTGTAGGTGGGTGTTGTGAGCGAATTGC TGTCGCGCTGTCCTCAAGAGGGATGCCTCGTGTGCGGTTTCTAGCTGCCC CTGCCCCCTCCCCGCCGCCCCCCGCCGTGTCGCCTTGCCAAGGCTCTGCC GACCGCGGATCGTGAAAAATACTGTACAAAATCGTGAAATATACCTGAGT ACGACCTCGACACTTAATTGCCGTCGTTTTCGTACTAGGCGTGTTGACAA AATGAGGCGGTTGACGTTTTGGAGCGTGTTGTTGTGTCATTCCGGCACTG ACTACTACTATGTAGGTAGTTAATTAAGAGCGAAGTAGGCGCGGACATCG TGTGGCACGACACATGTCAATCGGTGGCTCATGCCGGTGGGTTTAAGGTG CATGGAAACGCCAAGAAGCATGGCGTGCAATGTAGAACCAAAGGGTTTAT TATGGCATAGATTGCTCTGCCGCGTTGGCATCGCGCCTTCCCAATATTGA TGTTACATCGTTTAATAAAAACGAAGAAAAAAGTTGCGAAAAGTGTATGT AAGTGCGCTACACATAACTAGCTTCCCGGTCGGGTAGGATACACCCCTAC AACTAGGGTTATCAAAGGGATACTGCTAAGCGTGCTCGACAAAAGTCTGT CACGGAAATCCGTGGCAAATGTTCGTGACGGTTGGTATTGTAGGTGGGCG GACCACCTTTTTTTATAATGTTTCGCACCCCTCCTGCGGTTATCTATCTA AGGACGATTGATTTGTGGACGTGTAAAGAAAAGGGACGAGTCGCCAAAAA CCTCCGGATGTGGAGCGTAGTGTCGTACATACAGGTTAAATGTTTCCAAA GTGGGGCCCCCACTTTTTCTCCCTCAATATTGAGAGTTAGCAAGTAAAAC AAAGTGCGTTGTGAGCGTATGAGCAAGGCGCATCACACTTGGGCGTTTAA ATTCGCGTCACGTGACTTTAGTCCAGACCCATACTTAGACGTGGTTTGTA GAAATTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig603:4374..9131+

>mRNA_L-elsbetiae_contig603.14562.1 ID=mRNA_L-elsbetiae_contig603.14562.1|Name=mRNA_L-elsbetiae_contig603.14562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2106bp|location=Sequence derived from alignment at L-elsbetiae_contig603:4374..9131+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTACGCCCCTCAACTTCATCACCAGCATCGCACTTGTATTTTTTTCA
CCCTCCGCTTCTCCTGTTGATCACACTCGGTTCGCTCGTGATGTCGTCTA
CGTCCAAAGTCGATGTTTGTTCCTCGGCCGCGCCCGACTCGGTCTGGGCC
TCCCTGCAGTCTGCCAGGCCTCACCTAGCTGCTGGTGCGGTGGCAAGGTT
CTTCAGCATTTCTGTCGGATGGTACGCCCCTCAACTTCATCACCAGCATC
GCACTTGTATTTTTTTCACCCTCCGCTTCTCCTGTTGATCACACTCGGTT
CGCTCGTGATGTCGTCTACGTCCAAAGTCGATGTTTGTTCCTCGGCCGCG
CCCGACTCGGTCTGGGCCTCCCTGCAGTCTGCCAGGCCTCACCTAGCTGC
TGGTGCGGTGGCAAGGTTCTTCAGCATTTCTGTCGGCTATCCATTAGATA
CGATCAAGACACGATTGCACCTCGGCAGATCCTTCAGGGTGCCATCGCTT
CCGGACCTTTACCGAGGGCTAGGAAGCTCTTTAGTTGGGCAGGTCCCGTA
CGGCATGCTGACCTTCGGGACATACGAGCTCTACAAGACGGCTTTGCTGG
GGAGGTTCCCGCTATCCATTAGATACGATCAAGACACGATTGCACCTCGG
CAGATCCTTCAGGGTGCCATCGCTTCCGGACCTTTACCGAGGGCTAGGAA
GCTCTTTAGTTGGGCAGGTCCCGTACGGCATGCTGACCTTCGGGACATAC
GAGCTCTACAAGACGGCTTTGCTGGGGAGGTTCCCGGAGGTTCCGCAGGC
GGTCACCTTCTGCGCGGCTGCGATTCTTGGAGACATGACCGGCAGCCTTT
GGCTTGTGCCTTCCGAGGTGGTCAAGGTTCAAATGCAGGAGGTTCCGCAG
GCGGTCACCTTCTGCGCGGCTGCGATTCTTGGAGACATGACCGGCAGCCT
TTGGCTTGTGCCTTCCGAGGTGGTCAAGGTTCAAATGCAGGGAGGAATCC
ACTCAAGCATCTCTAAGGCTACGCTCTCGATCTTCAAGAGGGCAGGCTTC
GGTGGCTTCTACCAGGGATTTAGCGGCCAGGGAGGAATCCACTCAAGCAT
CTCTAAGGCTACGCTCTCGATCTTCAAGAGGGCAGGCTTCGGTGGCTTCT
ACCAGGGATTTAGCGGCCAGCTGGGCCGCGATGTTCCCTTTCGGGCACTC
CAGCTCACCTCTTACGAACTGCTGCGAAAGATGCTCGGGAATCGCCGAAA
ACGGCAGCAGGAAGCCGCTCTTGCAGCGGGCGAACCTCAGGGCCGCGCCG
CCGCCGCCGGCGCTGCCAACGGAGGAGGCAGTTTTCAACTCTCGTCGGGA
GATGCCGCCTTGGTGGGAGGCGTCGCGGGAGCAATCAGCGCGACGTTCAC
CTGCCCGCTCGACGTCCTCAGGACCCGTCTGATGGTGGGCGGCAGCGGAG
GAGGGGCGAAAAACTGGAGGGGCGCGATCAAGGCTGGCAGCTTGTTTTCC
GGGCTGGGCACTCGCGTGCTCTATGTCGGAACGTCGAGCGCCGTTTTCTT
TGTCGTGTACGAAGCCGTCAAGACGCATCTCGGGGTGGCCATGTCGGCCC
CGGCGGCAGCGACTGCCAACGTCAAGCGAGAACAGTGACTGGGCCGCGAT
GTTCCCTTTCGGGCACTCCAGCTCACCTCTTACGAACTGCTGCGAAAGAT
GCTCGGGAATCGCCGAAAACGGCAGCAGGAAGCCGCTCTTGCAGCGGGCG
AACCTCAGGGCCGCGCCGCCGCCGCCGGCGCTGCCAACGGAGGAGGCAGT
TTTCAACTCTCGTCGGGAGATGCCGCCTTGGTGGGAGGCGTCGCGGGAGC
AATCAGCGCGACGTTCACCTGCCCGCTCGACGTCCTCAGGACCCGTCTGA
TGGTGGGCGGCAGCGGAGGAGGGGCGAAAAACTGGAGGGGCGCGATCAAG
GCTGGCAGCTTGTTTTCCGGGCTGGGCACTCGCGTGCTCTATGTCGGAAC
GTCGAGCGCCGTTTTCTTTGTCGTGTACGAAGCCGTCAAGACGCATCTCG
GGGTGGCCATGTCGGCCCCGGCGGCAGCGACTGCCAACGTCAAGCGAGAA
CAGTGA
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