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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 5 |
Model size | 984 |
Cds size | 984 |
Stop | 0 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816650.9234378-CDS-L-elsbetiae_contig6:84298..84381 | 1622816650.9234378-CDS-L-elsbetiae_contig6:84298..84381 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 84299..84381 + |
1691683712.7493448-CDS-L-elsbetiae_contig6:84298..84381 | 1691683712.7493448-CDS-L-elsbetiae_contig6:84298..84381 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 84299..84381 + |
1622816650.937081-CDS-L-elsbetiae_contig6:85022..85404 | 1622816650.937081-CDS-L-elsbetiae_contig6:85022..85404 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 85023..85404 + |
1691683712.759014-CDS-L-elsbetiae_contig6:85022..85404 | 1691683712.759014-CDS-L-elsbetiae_contig6:85022..85404 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 85023..85404 + |
1622816650.9499211-CDS-L-elsbetiae_contig6:85918..86034 | 1622816650.9499211-CDS-L-elsbetiae_contig6:85918..86034 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 85919..86034 + |
1691683712.7674055-CDS-L-elsbetiae_contig6:85918..86034 | 1691683712.7674055-CDS-L-elsbetiae_contig6:85918..86034 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 85919..86034 + |
1622816650.9658928-CDS-L-elsbetiae_contig6:86426..86611 | 1622816650.9658928-CDS-L-elsbetiae_contig6:86426..86611 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 86427..86611 + |
1691683712.7846162-CDS-L-elsbetiae_contig6:86426..86611 | 1691683712.7846162-CDS-L-elsbetiae_contig6:86426..86611 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 86427..86611 + |
1622816650.97805-CDS-L-elsbetiae_contig6:86793..87011 | 1622816650.97805-CDS-L-elsbetiae_contig6:86793..87011 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 86794..87011 + |
1691683712.7991762-CDS-L-elsbetiae_contig6:86793..87011 | 1691683712.7991762-CDS-L-elsbetiae_contig6:86793..87011 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6 86794..87011 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6.14515.1 >prot_L-elsbetiae_contig6.14515.1 ID=prot_L-elsbetiae_contig6.14515.1|Name=mRNA_L-elsbetiae_contig6.14515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=328bp
LGAIGAFCREQFVELVLGWAVVPGDESREAQRSAVQLLSSLSRQFQSDEM HIVFEEGVHLTWGAAPLEEPVLGRPKEGGCRRPPEAGTGGSGGTREGLMP GLSSGFSFSETGAAPHVGAAAAATASGSASGQRGGSGSGLSLTRFLSNVV VACSQGTIVLDGVPPAAVASLQEVGYLPVELAFSLGTCTMSGFALAPLSG DGVIEGCSDELSMLLGPAHLGYVCAGHRGPRSGRGEEACLTIHGALEGVA TAVAVARRTGCGVQLRVSTTTAPDTATAPASPPSRHNPTPGDPATPAAAV DPTTCEGMNIYYPALLSDALEFLGAGLC back to topmRNA from alignment at L-elsbetiae_contig6:84299..87011+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6.14515.1 ID=mRNA_L-elsbetiae_contig6.14515.1|Name=mRNA_L-elsbetiae_contig6.14515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2713bp|location=Sequence derived from alignment at L-elsbetiae_contig6:84299..87011+ (Laminarionema elsbetiae ELsaHSoW15) CTCGGCGCAATCGGGGCGTTTTGCAGAGAGCAATTTGTCGAGCTCGTTCT
CGGGTGGGCGGTCGTTCCTGGAGACGAGTCGAGGTGAGGGTGAAAACGGT
CAGAGGGGCTGTTTTTTCTTCTTTCTTCTTCCCTCCCCGCTTTTTCGGCA
GACTTGTAGACAAAGCACGATGCTTCGCTCGTGCTGCTTCCCCAAGCATG
CGGCCGTAATGATGGGGTATGTTAGCACGTATCCGGCTCACCTCACCCGA
TCTGTGCGTAAAGGGCACAAACACTGTCACCGGTGTTGTGAGTGTGCCAG
ACCCGTATTGGTATTAAGAGGTGATGTTCACTGTTGTTCACTCTGGTCTG
CACTGGCGCTGCTGTTTTGTTTGTTTCGTCGTGTTAAGTGTTTGTGGTGT
GTCGTCCGACGTGATTTATGCGCGCACGCATCGTCGTGGAGATGCGCTTG
TTCCACGATTGTTTACCGTGCAAACACTCCTTGCCGTTTATTTCCCATTG
CGTAGACCGTATCCTCCCCGTTCACAGCGTCTACTGCTGTGCGAGAACAA
CGCCAGCACACGCGCTCTGCAGACGCAATTTACAAGTGTGCTTCCATTGA
CATACGTGGGACGAGGGCTTCCTGGTAGGCTGGATGGAAAGCTCTATCTC
GAAACTACCAATCGCACGCCGACGGAGGCGAATACTGAAAATCAACCCGA
AGCATCCCCCTGCCCCCCCTGCAGGGAAGCTCAGCGTTCGGCGGTCCAGC
TCCTGTCTTCCCTGTCGCGACAGTTCCAAAGTGACGAGATGCACATAGTC
TTCGAGGAAGGCGTCCACCTCACCTGGGGGGCGGCGCCTTTAGAGGAACC
CGTCCTTGGTCGACCCAAAGAGGGGGGCTGCAGACGACCACCGGAGGCAG
GCACGGGAGGTTCTGGCGGGACGAGGGAAGGGTTGATGCCGGGGCTGTCT
TCTGGTTTTTCTTTTTCAGAGACTGGAGCTGCGCCGCACGTGGGTGCGGC
GGCGGCGGCGACTGCGTCGGGCTCGGCAAGCGGGCAGAGAGGAGGGTCGG
GTTCGGGGTTGTCTCTGACCCGATTCCTGAGCAACGTCGTGGTTGCTTGC
AGCCAGGCGAGTCGAGTTCGCATACTGCTGCGCGTTGATTTGCTCGGTTG
GAGGTGTTGTGGAGCTATCTGTGGTGCACTTTTGCTGCTGAATTTCGAGA
CCGGTTCTGGAGCCCCTGCATCCATGCTATGGTTTGGTGGCTGACAGCGG
CAAAAATCGCCGGCAGAATGTGTTTTTCCGTGTCAATGCTCCTTGAAGGG
GTTCTGCCAGTGTCAGCATTTTGGTGTGTTGCATTTTTTTGATGCCCACA
GTTCTCAACATGCAGCATCGAGGCCTCGGTAGAATTTAATAAACGGAGGT
GTGTCGTGCTTCGGCAAGTGGATGATGGTACAGGAGCAAACCCAGCACGA
TCACCCTGAACAAAGTGCCAACAACCGGTCTTTATTCGCACCTGTTTCCT
CTGTTTTTGCCGCTATTGGTCAGCCTTGCAAAAAATCCCTTTGTGCTGAC
CTTCGATGGGCTCCTTGTTTTTCGGAAGTCGCGTACCTGATCGCGCGGAT
CTTTTTGTGGTTCTGTCCAGGGGACCATCGTTTTGGACGGAGTTCCTCCC
GCGGCAGTGGCATCGCTGCAGGAGGTCGGCTACCTGCCAGTGGAGCTGGC
ATTCTCGCTGGGCACCTGCACGATGAGTGGCTTTGCGTGAGTTACCCGCC
TTGACCAAACCGAGTTGGTTAGGCTAGCTCGCGGGACCACCAGCATACCC
CGGTCTGACTTTTCGCAGGGTTAACCGCGTTGGGCGCTTTTGGTTCACGT
TTGTTTCCCCCCACCCGGTTTGATCCCTGAGAGGAAGACGCGGGAACATG
ATCCACGCCGTTGTTTTCTTTGGCACACATAGCACGGACGGTACACGCGG
CGTTGTCACCCCTTTTGTTGATCAGGTCCCTAACTGCTGAGTTCGACAAG
CTGGTCGCGGCACGAACCGTGTGAAATGAACTCTTTCCTCCCGTCAACCA
TATTCCGTTTTGAGAAATAACACTCAAATGTTTCCCATCCTGTAACCCCC
GGCCACGAAAACGTCTCTTCTTGCACAGCTTGGCACCGCTCTCCGGAGAC
GGTGTCATCGAAGGCTGCTCGGACGAACTTTCGATGCTTCTGGGCCCAGC
ACATCTGGGCTATGTGTGTGCAGGGCATCGAGGACCCCGGAGCGGGAGAG
GCGAGGAGGCATGCCTCACCATCCATGGAGCCCTTGAGGGCGTGGCAACA
GCTGTAGCCGTAGGTGGGTAAGGAGTGCGCGACATTCGTCTCTCGCACCG
CACAAATTACCGTCGTCGAGGGCAGTGCCTGTTCGTTGGTGACGATCCAC
GCCTGCCTGTACACGCCAGAAACGTCAACCCAGTGAATTCTCCCCGGCCT
CATTACGCCCCCGTTGTGTGCTCTGTGCTTCGTGCCCACACGCAGCGCGT
CGCACGGGGTGCGGCGTGCAGCTCCGAGTGAGCACGACCACGGCACCGGA
CACAGCTACGGCTCCCGCTTCACCGCCGTCCAGACATAATCCAACTCCGG
GCGACCCCGCTACCCCCGCTGCTGCCGTAGACCCCACCACCTGCGAAGGA
ATGAACATATACTATCCCGCTCTGCTCTCGGATGCTCTCGAGTTTCTCGG
GGCCGGGCTGTGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6:84299..87011+ >mRNA_L-elsbetiae_contig6.14515.1 ID=mRNA_L-elsbetiae_contig6.14515.1|Name=mRNA_L-elsbetiae_contig6.14515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1968bp|location=Sequence derived from alignment at L-elsbetiae_contig6:84299..87011+ (Laminarionema elsbetiae ELsaHSoW15) CTCGGCGCAATCGGGGCGTTTTGCAGAGAGCAATTTGTCGAGCTCGTTCT CGGGTGGGCGGTCGTTCCTGGAGACGAGTCGAGCTCGGCGCAATCGGGGC GTTTTGCAGAGAGCAATTTGTCGAGCTCGTTCTCGGGTGGGCGGTCGTTC CTGGAGACGAGTCGAGGGAAGCTCAGCGTTCGGCGGTCCAGCTCCTGTCT TCCCTGTCGCGACAGTTCCAAAGTGACGAGATGCACATAGTCTTCGAGGA AGGCGTCCACCTCACCTGGGGGGCGGCGCCTTTAGAGGAACCCGTCCTTG GTCGACCCAAAGAGGGGGGCTGCAGACGACCACCGGAGGCAGGCACGGGA GGTTCTGGCGGGACGAGGGAAGGGTTGATGCCGGGGCTGTCTTCTGGTTT TTCTTTTTCAGAGACTGGAGCTGCGCCGCACGTGGGTGCGGCGGCGGCGG CGACTGCGTCGGGCTCGGCAAGCGGGCAGAGAGGAGGGTCGGGTTCGGGG TTGTCTCTGACCCGATTCCTGAGCAACGTCGTGGTTGCTTGCAGCCAGGG AAGCTCAGCGTTCGGCGGTCCAGCTCCTGTCTTCCCTGTCGCGACAGTTC CAAAGTGACGAGATGCACATAGTCTTCGAGGAAGGCGTCCACCTCACCTG GGGGGCGGCGCCTTTAGAGGAACCCGTCCTTGGTCGACCCAAAGAGGGGG GCTGCAGACGACCACCGGAGGCAGGCACGGGAGGTTCTGGCGGGACGAGG GAAGGGTTGATGCCGGGGCTGTCTTCTGGTTTTTCTTTTTCAGAGACTGG AGCTGCGCCGCACGTGGGTGCGGCGGCGGCGGCGACTGCGTCGGGCTCGG CAAGCGGGCAGAGAGGAGGGTCGGGTTCGGGGTTGTCTCTGACCCGATTC CTGAGCAACGTCGTGGTTGCTTGCAGCCAGGGGACCATCGTTTTGGACGG AGTTCCTCCCGCGGCAGTGGCATCGCTGCAGGAGGTCGGCTACCTGCCAG TGGAGCTGGCATTCTCGCTGGGCACCTGCACGATGAGTGGCTTTGCGGGA CCATCGTTTTGGACGGAGTTCCTCCCGCGGCAGTGGCATCGCTGCAGGAG GTCGGCTACCTGCCAGTGGAGCTGGCATTCTCGCTGGGCACCTGCACGAT GAGTGGCTTTGCCTTGGCACCGCTCTCCGGAGACGGTGTCATCGAAGGCT GCTCGGACGAACTTTCGATGCTTCTGGGCCCAGCACATCTGGGCTATGTG TGTGCAGGGCATCGAGGACCCCGGAGCGGGAGAGGCGAGGAGGCATGCCT CACCATCCATGGAGCCCTTGAGGGCGTGGCAACAGCTGTAGCCGTAGCTT GGCACCGCTCTCCGGAGACGGTGTCATCGAAGGCTGCTCGGACGAACTTT CGATGCTTCTGGGCCCAGCACATCTGGGCTATGTGTGTGCAGGGCATCGA GGACCCCGGAGCGGGAGAGGCGAGGAGGCATGCCTCACCATCCATGGAGC CCTTGAGGGCGTGGCAACAGCTGTAGCCGTAGCGCGTCGCACGGGGTGCG GCGTGCAGCTCCGAGTGAGCACGACCACGGCACCGGACACAGCTACGGCT CCCGCTTCACCGCCGTCCAGACATAATCCAACTCCGGGCGACCCCGCTAC CCCCGCTGCTGCCGTAGACCCCACCACCTGCGAAGGAATGAACATATACT ATCCCGCTCTGCTCTCGGATGCTCTCGAGTTTCTCGGGGCCGGGCTGTGC CGCGTCGCACGGGGTGCGGCGTGCAGCTCCGAGTGAGCACGACCACGGCA CCGGACACAGCTACGGCTCCCGCTTCACCGCCGTCCAGACATAATCCAAC TCCGGGCGACCCCGCTACCCCCGCTGCTGCCGTAGACCCCACCACCTGCG AAGGAATGAACATATACTATCCCGCTCTGCTCTCGGATGCTCTCGAGTTT CTCGGGGCCGGGCTGTGC back to top
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