mRNA_L-elsbetiae_contig6.14508.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6.14508.1 vs. uniprot
Match: D7FQU4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU4_ECTSI) HSP 1 Score: 603 bits (1554), Expect = 1.710e-198 Identity = 463/858 (53.96%), Postives = 512/858 (59.67%), Query Frame = 3 Query: 228 AWDDGGEYARAAEAAGVDVGGMLEAGVDAKQLLEFVSNFRRQEGDKLGLLDEQNLKFATSQVLRQGPKAAADAARAQFASDGRSRRAPAAG---ASAWGFAAEGEERGGRQAPSRATPGRQPLRPRNGTSPNSGLRFPSDGRRRGREATGAGPPSRNRATRSTRHTAGRPPSDPPPAPDQPFGERDRVETARLCDELSRWSSALEGAERQLGGKGGSAGLGGGLGGKGARVRVVTSVA-ADNAIEEGSERSTSTRENYHHEGFRSDEGSTTHRDTRNEPGRSRAAHAEEEAKALKDHGRRRSRRQAGDAEKSGGRDRSRSF--EDVYDVEEVDVGGWEESGLGPASSPSRRRVGGVRRSAPSNSNSNGHERPTPSYALPTKHFKTIDSRDRRHLQYAEDADGQKQTQRQAQLEEENAALKLRLEGQRRAIHELEHQAGTLREDARLRREEEISRLKTRVAIRSSSLSGGKCPCCASTHHARARATGGNGPSALKKRALAAEGRTQALERCLSESKAKEQRSREIVASLKHSYSGAQARMGSLESELESARMXXXXXXXXXXXXXXXXXXXXXXTRKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTRENRTLQDRLNDGSLRSRTRERDRWILAELRS--ESKSPPRRGPPKESHAATGRQPPPSAK-------------FRTRVGKGGLGRRRRLGEEDASLDSTSGPEPSGGSRS---PRTAVLCEDHVEGTGGR-LPPRDGRRGESARGWAGGAPEN--EVGRRLSTRSADGTAEDALGGPAILRGS-TLSGGSARSSTMGARYERLQAMYRRVNRRDAGTRGRAGV 2717 AWDDGGEYARAAEAAGVDVGGMLEAGVDAK LLEFVSN+R++EGDKLGLLDEQNLKFATSQVLR+GP+A + R RR P +SAWGF +GE SR Q R R TSPN +R + R G G +T T GRP + P A FGE D VETARL EL RWSSALEGAE+QLGG GG AG+ GG AR R V A A++A EEGSE+ST +R+ E F SD+ TH D R + EE D R R +R G+ E SG RDR RS E V DV EV WEES PA S SRR G VR S ++ GH RPTPSYALPTKHFKT D RDRRH YAEDA GQKQ QRQA LEEENAALKLRLEG RRAIHELEHQA TLR+DAR+R EEE SRLK ++A SS++GGKC CCASTHH R +A G NGPSALKKRALAAEGRT+ LERCL ESKAKEQRSREIVASLKHSYS AQA+ SLE+ELES R TRK DL RENR LQDRL+DG LRSRTRERDRWILAELRS +S+SP RR + + R PPP+A FR R G+ RRR LG +DAS DS S EPS RS P L E EG GGR LPPRD RR +G GG+P GR LSTRSADG AE G A+LRGS TLSGGSA + TM ARYERLQAMYRRVNRR+AG RGR+GV Sbjct: 6 AWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGDKLGLLDEQNLKFATSQVLRKGPRAG----------NQRPRRPPTTATGTSSAWGFGTQGET----DEASRRAVDCQSRRTRKRTSPNPEVRQSA------RVGIGNG---------NTHRTGGRPSA--PVA----FGEDDGVETARLRSELLRWSSALEGAEKQLGGNGGPAGMESWTGGGIARARHVAKAAPAEDAKEEGSEQSTPSRQVDDDESFDSDQEDATHHD------RPASTRVEERRNDRSDTRRSRRQRDEGEGEVSGDRDRHRSHSPEVVDDVVEV----WEESEGEPACSSSRRPGGRVRGSI----STYGHARPTPSYALPTKHFKTPD-RDRRHAVYAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLRDDARIR-EEEFSRLKKKLAATPSSVAGGKCSCCASTHHGRQKAAGENGPSALKKRALAAEGRTETLERCLRESKAKEQRSREIVASLKHSYSAAQAKAVSLEAELESTRNSLSEARQEIVESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIERARLEAVKLREEKARVEGESQDLARENRMLQDRLSDGKLRSRTRERDRWILAELRSHSQSRSPSRR---RAEGQDSRRDPPPTASRPAARQRSLTREDFRAR--NDGV-RRRHLGVQDASFDSASDSEPSVRCRSLSPPPNPGLGEGRAEGAGGRWLPPRDSRRVPCVQGRVGGSPGGWGGTGRGLSTRSADG-AEGPPGDAAVLRGSSTLSGGSA-NGTMKARYERLQAMYRRVNRREAGARGRSGV 804 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6.14508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6.14508.1 >prot_L-elsbetiae_contig6.14508.1 ID=prot_L-elsbetiae_contig6.14508.1|Name=mRNA_L-elsbetiae_contig6.14508.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=876bp MDSSNQGEDSFLVELLNAKERHGDGQSFMATPPDERTSTEDGFPAWDDGGback to top mRNA from alignment at L-elsbetiae_contig6:10671..18781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6.14508.1 ID=mRNA_L-elsbetiae_contig6.14508.1|Name=mRNA_L-elsbetiae_contig6.14508.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8111bp|location=Sequence derived from alignment at L-elsbetiae_contig6:10671..18781- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6:10671..18781- >mRNA_L-elsbetiae_contig6.14508.1 ID=mRNA_L-elsbetiae_contig6.14508.1|Name=mRNA_L-elsbetiae_contig6.14508.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5256bp|location=Sequence derived from alignment at L-elsbetiae_contig6:10671..18781- (Laminarionema elsbetiae ELsaHSoW15)back to top |