mRNA_L-elsbetiae_contig5965.14459.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: D7FUN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN7_ECTSI) HSP 1 Score: 387 bits (995), Expect = 1.420e-115 Identity = 206/247 (83.40%), Postives = 219/247 (88.66%), Query Frame = 2 Query: 20 DERDGVVEVEMSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGA----TGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDG 748 D+ DG VEVEMSCGWVLIPFLELVE+ EVKKVRYKLLGGTPFAKTDI+EDEVMTRRYGWRAVLKAMKIEG HK SEVEIKILPV+ LSK KQED+FRLPRNVILS TFVSLVRHYR YAAN LAKRSA GMGNVGFGAGSASSEPVLALFPRLA DPALMMALKNQWE E+RK+HVDGRLGATIS+KL GL +GG XXL G TGAAREA LL+AFE+AV+RLWPAFCHIDAQ+ RAS G G Sbjct: 1712 DDGDGTVEVEMSCGWVLIPFLELVESHEVKKVRYKLLGGTPFAKTDINEDEVMTRRYGWRAVLKAMKIEGLHKGSEVEIKILPVNALSKAKQEDIFRLPRNVILSDTFVSLVRHYREYAANSLAKRSARGMGNVGFGAGSASSEPVLALFPRLAGDPALMMALKNQWETEMRKTHVDGRLGATISNKLAGLAMGGGGXXLGGGLVGVTGAAREARLLSAFEKAVLRLWPAFCHIDAQRGRASGGNIG 1958
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A835YK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK05_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.100e-54 Identity = 142/322 (44.10%), Postives = 181/322 (56.21%), Query Frame = 2 Query: 8 GGRGDE-RDGVVEVEMSCGWVLIPFLELV-EAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGATGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQILDSTDSFHSDTPTNALQRGEGGGGWRGGGGDTLSSVSQEGRVMVAFTLKEVAFDVA 967 GG GD+ G+VE EMSCGW L+P EL E + ++VRY+L GGTPFA+ DI +EV TRRYGWRA+LKA +++G K SE+E+K++P+ L Q D RLPRNVI++A+ L+R++R A LA R+ G G FG G A S P LALFPRLAADPAL AL W E +GR G GA G + AFE V+R WPA H+DA A AES+E LE+R +R R + DSF + P+ + G GG G GGGG ++ AF+ KEVAFDVA Sbjct: 1128 GGAGDDIPPGLVETEMSCGWALVPLAELAAETEAGRRVRYQLQGGTPFARADIQREEVQTRRYGWRALLKAARLDGVDKRSELELKVIPLRALPPDAQADALRLPRNVIVAASLAPLLRYHREALARALAARA--GGGGAAFGRGGAVSAPALALFPRLAADPALAAALVALWARE------EGRHGG-------------------GAEGGVK------AFEACVLRAWPALVHVDA----APPPRLRAESFEALEARIKRARALALGGDSFQAGVPSQS--HGGGGLGKEGGGG----------QLYAAFSAKEVAFDVA 1400
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A7S3XN37_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN37_HETAK) HSP 1 Score: 134 bits (337), Expect = 1.280e-30 Identity = 87/288 (30.21%), Postives = 146/288 (50.69%), Query Frame = 2 Query: 20 DERDGVVEVEMSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGN--VGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGATGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQILDSTDSFHS-----DTPTNALQRGEG 862 +E+ +VEMSCGW + ++V + +++ + GGTPFA I +++ RRYGWRA +K K+ G K S++E+KI+PV L+ ++ED++R+P+N++L + ++LVR YR YA + + + N G G+ SEPVLALFP++ D A+ +AL++ WE E++ + L ++ F+ V+RLWPA+ ++ +K ESYE ++ R + Q FH DT T ++ +G Sbjct: 124 NEKADECQVEMSCGWCKVSMAQIVSMSQTGRIQLDIQGGTPFASESIKPNDIRARRYGWRAAVK--KVAGVKKSSQMELKIIPVHKLAAGQKEDIYRMPKNILLPFSSINLVRLYREYAVVKIHDTN-LNQSNPIAGLAYGTKFSEPVLALFPKMINDQAMQLALRHHWEEELKDL-------LPLQKTETNL--------------------MIEKFQAIVLRLWPAYSTVEGRKDSRVP-----ESYESMQKRAMILMQAGKGAIPFHERSEIRDTSTADNKKADG 376
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A7S3XMQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMQ6_HETAK) HSP 1 Score: 134 bits (337), Expect = 2.970e-29 Identity = 87/288 (30.21%), Postives = 146/288 (50.69%), Query Frame = 2 Query: 20 DERDGVVEVEMSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGN--VGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKSHVDGRLGATISSKLVGLGLGGXXXXLAGATGAAREACLLAAFERAVMRLWPAFCHIDAQKRRASAGEDGAESYEELESRGQRIRQILDSTDSFHS-----DTPTNALQRGEG 862 +E+ +VEMSCGW + ++V + +++ + GGTPFA I +++ RRYGWRA +K K+ G K S++E+KI+PV L+ ++ED++R+P+N++L + ++LVR YR YA + + + N G G+ SEPVLALFP++ D A+ +AL++ WE E++ + L ++ F+ V+RLWPA+ ++ +K ESYE ++ R + Q FH DT T ++ +G Sbjct: 966 NEKADECQVEMSCGWCKVSMAQIVSMSQTGRIQLDIQGGTPFASESIKPNDIRARRYGWRAAVK--KVAGVKKSSQMELKIIPVHKLAAGQKEDIYRMPKNILLPFSSINLVRLYREYAVVKIHDTN-LNQSNPIAGLAYGTKFSEPVLALFPKMINDQAMQLALRHHWEEELKDL-------LPLQKTETNL--------------------MIEKFQAIVLRLWPAYSTVEGRKDSRVP-----ESYESMQKRAMILMQAGKGAIPFHERSEIRDTSTADNKKADG 1218
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A024G811_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G811_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.500e-12 Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESE-VEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEV 532 VEM C W IP L+E + + R KLLGGT F+ +++EDE+M RRYGWRA + T + V IK LP+ L + Q+ V+++P ++L + +S+ Y Y + L++ S S++ P L + PR+ + + + +E+EV Sbjct: 1032 VEMVCCWTKIPLYLLLERRTSTFRTREKLLGGTVFSPCEVEEDEIMRRRYGWRAFSNVFR--ATRPPTPIVGIKCLPIKNLPEEYQKCVYKMPPLLLLPYSAISITAEYMMYMNSLLSETSVA----------SSACAPALKILPRIIENNLALSSFSRAFESEV 1184
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A024TWH4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWH4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.890e-10 Identity = 48/169 (28.40%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASS----EPVLALFPRLAADPALMMALKNQWEAEVR 535 +EM+C W +P + L+ + ++ ++ L GGT ++DEDE+ RRYGWRA+ KA+K + ++ IK L + LS ++ + +LP V++ + V +++ Y + L+ SASS EP L LFP++ D A + +++++R Sbjct: 156 IEMTCCWAKVPLVNLLSSTVDIIRLEEPLYGGTILNPVELDEDEISRRRYGWRAIAKALK---PYTPPKLSIKSLQIPKLSAQEKLQIAQLPATVVVPYSAVPILQDYMHLMVSVLSNPQ------------SASSVHTCEPALKLFPKILDDHIAYEAFRAVFDSDMR 309
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A6A4ZID5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZID5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.040e-10 Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVR 535 +EM+C W +P + L+ ++ ++ L GGT ++DEDE+ RRYGWRA+ KA+K + + IK L + LS ++ + +LP V+ + V +++ Y + L+ N+ + + EP L LFP++ D + A + ++ E+R Sbjct: 49 IEMTCCWAKVPLVNLLSTTVDIIRLEEPLFGGTILNPVELDEDEISRRRYGWRAIAKALK---PYTPPMLSIKSLQIPKLSVQEKLQIAQLPSTVVAPYSAVPMLQEYMLLMMSVLS--------NLQSPSSVHTCEPALKLFPKILDDHIVYEAFRLVFDNEMR 202
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: A0A1V9ZHV0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZHV0_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.290e-10 Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 44 VEMSCGWVLIPFLELVEA--QEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVRKS 541 VEM+C W IP +LV QEV + L GGT ++DEDE++ RR GWRA+ KA K + +++IK L +S L + + LP ++ + V +++ Y A L K + N + EP L LFPR+ + + +N + E+R S Sbjct: 430 VEMTCCWAKIPLTQLVSKTKQEVIRFDVPLFGGTFLNPVELDEDEILRRRSGWRALAKAFK---QYTPPQLQIKSLQISNLPLQDKLCISELPSTIVAPYSSVPIIQDYMA-----LMKSVISTLDNPSH---VYTCEPALKLFPRILDNDEVYEVFRNAFNEEMRSS 586
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: W4FZG5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZG5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.430e-9 Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVR 535 +EM+C W +P + L+ ++ ++ L GGT ++DEDE+ RRYGWRA+ KA+K + + IK L + LS ++ + +LP V+ + V +++ Y + L+ N+ + + EP L LFP++ D + A + ++ E+R Sbjct: 2033 IEMTCCWAKVPLVNLLSTTVDIIRLEEPLFGGTILNPVELDEDEISRRRYGWRAIAKALK---PYTPPMLSIKSLQIPKLSVQEKLQIAQLPSTVVAPYSAVPMLQEYMLLMMSVLS--------NLQSPSSVHTCEPALKLFPKILDDHIVYEAFRLVFDNEMR 2186
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Match: F0W0F4_9STRA (Uncharacterized protein AlNc14C4G597 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0F4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.780e-9 Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 44 VEMSCGWVLIPFLELVEAQ-EVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRAVLKAMKIEGTHKESEVEIKILPVSTLSKVKQEDVFRLPRNVILSATFVSLVRHYRAYAANCLAKRSAMGMGNVGFGAGSASSEPVLALFPRLAADPALMMALKNQWEAEVR 535 VEM C W IP L+E + + R KLLGGT F ++++DE+M RRYGWRA ++ V IK P+ LS Q+ V+++P ++L + +S+ Y Y + L+ S + + P L + PR+ + + +E+E + Sbjct: 1046 VEMVCCWTKIPLYLLLERRTSTFRTREKLLGGTVFIPCEVEKDEIMRRRYGWRAFSNVLRAPRPPTPM-VGIKCSPIKQLSDEYQKFVYQMPPLLLLPYSAISITAEYMMYMHSLLSDTS--------IASSVVACAPALKILPRIIESNLALTSFCRAFESETK 1201 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5965.14459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5965.14459.1 >prot_L-elsbetiae_contig5965.14459.1 ID=prot_L-elsbetiae_contig5965.14459.1|Name=mRNA_L-elsbetiae_contig5965.14459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp MSCGWVLIPFLELVEAQEVKKVRYKLLGGTPFAKTDIDEDEVMTRRYGWRback to top mRNA from alignment at L-elsbetiae_contig5965:929..4319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5965.14459.1 ID=mRNA_L-elsbetiae_contig5965.14459.1|Name=mRNA_L-elsbetiae_contig5965.14459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3391bp|location=Sequence derived from alignment at L-elsbetiae_contig5965:929..4319- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5965:929..4319- >mRNA_L-elsbetiae_contig5965.14459.1 ID=mRNA_L-elsbetiae_contig5965.14459.1|Name=mRNA_L-elsbetiae_contig5965.14459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig5965:929..4319- (Laminarionema elsbetiae ELsaHSoW15)back to top |