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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 273 |
| Cds size | 204 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816635.7383754-CDS-L-elsbetiae_contig5888:7340..7440 | 1622816635.7383754-CDS-L-elsbetiae_contig5888:7340..7440 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5888 7341..7440 - |
| 1691683701.650061-CDS-L-elsbetiae_contig5888:7340..7440 | 1691683701.650061-CDS-L-elsbetiae_contig5888:7340..7440 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5888 7341..7440 - |
| 1622816635.7512183-CDS-L-elsbetiae_contig5888:10857..10961 | 1622816635.7512183-CDS-L-elsbetiae_contig5888:10857..10961 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5888 10858..10961 - |
| 1691683701.6610136-CDS-L-elsbetiae_contig5888:10857..10961 | 1691683701.6610136-CDS-L-elsbetiae_contig5888:10857..10961 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5888 10858..10961 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816635.7667508-UTR-L-elsbetiae_contig5888:10961..11029 | 1622816635.7667508-UTR-L-elsbetiae_contig5888:10961..11029 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5888 10962..11029 - |
| 1691683701.6709576-UTR-L-elsbetiae_contig5888:10961..11029 | 1691683701.6709576-UTR-L-elsbetiae_contig5888:10961..11029 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5888 10962..11029 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5888.14350.1 >prot_L-elsbetiae_contig5888.14350.1 ID=prot_L-elsbetiae_contig5888.14350.1|Name=mRNA_L-elsbetiae_contig5888.14350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp
MIRSLPLGKLVARAPGIGHAYRRGARTNGLLRTQIPGVCRQQRQWTLKSA
AREFSSRGRGTRQQPWRQ back to topmRNA from alignment at L-elsbetiae_contig5888:7341..11029- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5888.14350.1 ID=mRNA_L-elsbetiae_contig5888.14350.1|Name=mRNA_L-elsbetiae_contig5888.14350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3689bp|location=Sequence derived from alignment at L-elsbetiae_contig5888:7341..11029- (Laminarionema elsbetiae ELsaHSoW15)
AGGGAGAAAGGAGAAACAGCAGTCCACCGTAGTTGTGGTAGACTAGAGGC
AAGGGCGCTTTACCACCGATGATCAGGAGCCTTCCACTTGGAAAGCTGGT
GGCGCGAGCGCCCGGCATTGGTCATGCTTACCGCCGTGGAGCAAGAACAA
ATGGGTTGCTCCGCACCCAAATGTGAGCTTGTTGGCATTGTTCATCGTTA
CAGCCTGGGTGTGGAGAGGTCCGCGTTCTTTGAGCCTTATTTAGAGAAGA
CCTCGGTACGCTGCTGAGTTTGGAAGCCAGCACTATACAAAACAAATTTG
AACGAGATCACTGCACACGCAGCAGATGCAGGGAACGGGGGAACACAGTA
TGTAGTGCTGCACGCCATAGTATTTAGTCGGAAACACCCTTTCGGCTGCT
GTGCGGTCCGGCGACGACACTATATACAGATCTAAGGCACTGCGGCCGTA
GAGTTCTGCCTTCCGTGTCTAATGACACCTGATTTGTCACGCTTCTCTCG
CTGCTGCCCTCAAACCCGACGAAACAAACTTTCGCAGTTGTGCCAGGGTG
CCGCAAAATAGCTGGCAAACTTTGTGCGGCGCAGCCTCCCGCTGGGTGGC
GCGTGGCTTTCACCCGATGACGAGAACGCGTCGCAGACAGAACGGATGGT
TAAAAAAATTGGCACGTAGACTAGAAGCACCCTGAGGACCTAGCACCGAA
AGTGGCGCGTCGAAATACACACAGCGGCAGTCAGGAGGGACGATTTTCTC
ATAAAATCCGCCTTCGCGCACAGGCATCATGCTTAGTCTAGCTTCCTACA
ACGGTTTAGGGAGGGTGCACTGGTATGTCAAAGAGGGTGTTGTGAGGGTT
TCTCAGCAGTTCGAATTTTGCTGCAACACGCAGTATAGGCCGAGGACTCG
CAATCGGCGCGAAGCAAGTTTTGGATTTGCGCGGATATCGTACAATAGAC
TAGATATGCACTCTTCGGTCGATACAAAAAAAAGATCCGGCGAAAAATGC
TACACAGTCAAAGTTGCTTCGCGCCGATTGCGAGTTCTCGGCCTATTTAT
ACTGCGTGTTGCAGGAAGATTCGAACTGTGGAGAAACCCTCACAACAGCC
TCTTTGACATACCAGTGCCCCCTCCCTAAACCGTTAGTAGGAAGCTAGGC
ATGATGCCTGTGCGCGAAGGCGAATTATATGAGAAAAACGTCCCTCCTGA
CTGCCGCTGAGCGTATTTCGACGCGCCACTTTCGGTGCGAGGTCCTCAGG
GTACTTGTAGTCTACGTGCCAAAATTTTCAACCATCCGTTCTGTCTGCGA
CGCGTTCTCGTCATCGGGTGAAAGCCACGCGCCACCCAGCGGGAGGTTGC
GCCGCACAAAGTTTGCCAGCTATGTATTTTTTTTTTTCTACATCAGTGTT
ATTTGACTCCAGTTTCAAGGGGGCACATGTCCCGTTGGATTTTTGATTTT
TGAGGCGGGACATCCTGGGCACCGGAAACATAGGCCCTTCAGTACACCCA
GGCACGGAGAAGCAAATATCTCAGCTTACAGAGAGTGATCCAAAACACGA
CTTTGAGACTGTGTAGTTGAGATGTGTGACTACGGAGGTGACCAAACGTT
CGGGTGGTAGTTTTTGTAGGGCACTAACTCTTGGCATTGCACAAATTAGA
TATGAAATAGAGAGACGAAGGCCAGAGAGAGAGCTAGTTTGGAGACAGAC
TGCAGCACGTTTTTTTGCGTGAACAAAGCGTCGAGATCCACCAGGAAACT
ACACACATCGGAAAGAATAGGGCGTCAGGTGTGCAGATTCCCCCCTGAGA
GTAGCTAACTCGTTGCAGGGCATAAACTCTTGCCACTGCCGTCTGCTGCT
GCTGGCCTGGCCGAGCGCACCAACGCGTGTTGGAAGGCAGCTCTAATTCG
ACACTCACAGAGCGATTCGGGGTCTAAAATCTGCACCGGCACTAGCTATG
AGCAATAGGTTGTATATGCTGTGCTTTGGGCCGTCCGGAATGGAGCATGC
CGGCTCCTAGAGCCGGCGCACGATGCCAGTGCGTGCCGAAGAGGGCGGGG
GCTTTGGGTGGGGGGGTGTTGTATCAGCGTGCTTTCTTCTGCGCCGCCAC
CAGGACAGTTGCGGATCGCACATAATCACCCATTCTCCGCGACTGGCGCA
TCTCGATTCGCTCCATTCATTTTTCTACACCCTCGGGAGGCACAAGAGCT
ACAGGCAGGTTCTTTCCACTTCACCAATCTGGCATTCAGCGTCGCGATCC
CGCCGAAAAGGAGCGAAAAAAAAAAAAAAAGTCAAATAACACTGACATAG
TCAGCACTCGCTCCTTCACTCTCTCTCTCGTCCTACTACCTTCGTCGTGC
TACTAGGTTGCGCGTCTCGCTTGTCCGAGGCACGAATAACACAACACAAC
ACTCATGCAACACCCCGCCAACTTGTCGGGTACACATGTATTGCCCCGCA
AACCCCGCCCGCCAACAATAGAGCGGGGTAGCTCGGTAGCCCCTCGCACC
CGCGTTTCTATTTCATCGCGAATCACATATGTATACCTATCATTATGCAT
CGCCAAAGGCCACCTGACATTTAAAAACTGCGCTTTGCTGCTGCCGAACG
AGATCAGTCCACCGCCTTTGTCTTTCATCACAATCAGCCTCCGCCGGAAA
GTAAGGTAGTTGGGGGCCCCGCGATCTTTGTGGATGTTCGTATTCTCCGA
GCTTACGTTTGTTTATCCCGAGAACACGCGCGTATGTAGATGCCCCGTCA
CATCCAGCTAACGATGAACGTGCTAGTGCGAGGTAGCAGCATTTGGCAAG
AAACCGCAAGGTATACTTTCTGCACGAGGGGAAAGGAAGGAGGGGGGTCA
AGACGCTATAGGCTTCCTGCGGCAGGGCCCCCATTTCTGAAAAAGTGGCC
GTGGGGGGTTTGTCACTCTATTTCGTAGATAACCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCTCCTTTGGGTGGGGGGGGGCTTTCTGAGAGACCTC
GGGACGAGCCCCCCGTGGGGGGGGCGGGGGGGNNNNNNNNNNGCAGGCCC
CCCTTTTCGGAAAAAGGGGCCGGGGGGGGTTTTTCACTCTATTTCGTAAA
TAACCCCCCCCCCCCCCGCTGCCCCCATAACTATTTTTGAGGGTTGGGGG
CTCTATTGCAGAAAGCCTATGGACCACGTCTCTGTGGAGAAGCATGCGGA
GAACGAATTGCCCTTGTGTCGTGCGCTGGCGTACAATGTACATACCTACA
TAAGAGTAGAAAGCATAGCTCTAACGAAGGCTGCGACAAATGTACCTGCA
ACGCTTCACAAACTACCCAACGATCAGATTCTTGGGAGTCTCCGAAAAGA
AAACGTTGCTATTTGTGTACACAGGAGTATGGACGTAGTCTATGTACTTC
GGGACTTTGGGCACTCTTTTGTTGCACAGACAACATATATATACCCATGA
AGTTATTTAGTACAAACCGCGTTCAGAGCGAGCCAGCAGCGGCAAAGCAG
GAGCCGCAGCAACCACAGCAATCCTCTCGACAACACCCCCCCCCCCTCCC
GCTCCTCGACTGGCCTGCCCTAATCCTCTACGCGAGAAGCCCTGGCGTCT
GCAGGCAGCAGCGGCAATGGACGTTGAAGTCCGCCGCTCGAGAATTTAGC
TCCCGTGGTAGAGGCACGCGGCAACAACCCTGGCGGCAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5888:7341..11029- >mRNA_L-elsbetiae_contig5888.14350.1 ID=mRNA_L-elsbetiae_contig5888.14350.1|Name=mRNA_L-elsbetiae_contig5888.14350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=408bp|location=Sequence derived from alignment at L-elsbetiae_contig5888:7341..11029- (Laminarionema elsbetiae ELsaHSoW15)
ATGATCAGGAGCCTTCCACTTGGAAAGCTGGTGGCGCGAGCGCCCGGCAT
TGGTCATGCTTACCGCCGTGGAGCAAGAACAAATGGGTTGCTCCGCACCC
AAATATGATCAGGAGCCTTCCACTTGGAAAGCTGGTGGCGCGAGCGCCCG
GCATTGGTCATGCTTACCGCCGTGGAGCAAGAACAAATGGGTTGCTCCGC
ACCCAAATCCCTGGCGTCTGCAGGCAGCAGCGGCAATGGACGTTGAAGTC
CGCCGCTCGAGAATTTAGCTCCCGTGGTAGAGGCACGCGGCAACAACCCT
GGCGGCAGCCCTGGCGTCTGCAGGCAGCAGCGGCAATGGACGTTGAAGTC
CGCCGCTCGAGAATTTAGCTCCCGTGGTAGAGGCACGCGGCAACAACCCT
GGCGGCAG back to top
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