mRNA_L-elsbetiae_contig5876.14340.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A6H5KV80_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV80_9PHAE) HSP 1 Score: 291 bits (744), Expect = 4.110e-89 Identity = 156/182 (85.71%), Postives = 161/182 (88.46%), Query Frame = 2 Query: 2 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPPRRRSESLRATEAXXXXXXXXXXXXXXXXXXSEALRVKQAAAAAVAALVAEEDL 547 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIF KNWRSV+LCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYD SPPRRRSES +ATEA XXXXX +EA RV++ AA AALVAEEDL Sbjct: 279 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFGKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDTSPPRRRSESFKATEALAIKEAAARAXXXXXAGENEARRVRREAAXXTAALVAEEDL 460
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A836C9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q1_9STRA) HSP 1 Score: 171 bits (433), Expect = 5.390e-46 Identity = 80/118 (67.80%), Postives = 101/118 (85.59%), Query Frame = 2 Query: 2 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGV 355 V +F+SY+++TAQLE DCV+ SL YIER+L ETAG+LR+ R NWRS+ L G+ILASK+WDDLSMW+ DF++VGR +L+RINELEVAVLQ LQYNVRV SS FA Y+FR+R+WC+LL Sbjct: 267 VHDFFSYIYRTAQLECDCVVTSLFYIERLLMETAGELRMCRTNWRSITLSGMILASKVWDDLSMWSVDFARVGRLTLKRINELEVAVLQALQYNVRVDSSNFARYFFRLRNWCLLLNA 384
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A7S2LBG9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBG9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.160e-33 Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 2 Query: 2 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 385 V +FY +F +Q+E +C+I+SL+Y+ER++ ++ G+LR NWRS++ ++LASK+WDDLSMWNCDFSK+G C SL+R NELE+A+L LQY V+V +S +A YYF +R G+ L +P Sbjct: 157 VTDFYRSIFVRSQMEIECIIISLIYVERLIKKSKGELRPQSDNWRSILFSCMVLASKVWDDLSMWNCDFSKIGPCGMTFSLQRTNELEIALLSALQYRVKVGASEYAKYYFLLRGMLCRSGLANDDLTRLNP 288
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: H6S3Z7_PLAVT (Cyclin (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S3Z7_PLAVT) HSP 1 Score: 125 bits (315), Expect = 8.370e-33 Identity = 60/123 (48.78%), Postives = 88/123 (71.54%), Query Frame = 2 Query: 23 VFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 388 V AQ+E +C+IMSLVY+ER+L T+G L++ +NWR ++ C +++ASK+WDDLSM N DFSK+ SL++INELE+ L+ ++YNVRV++ +A YYF +R C LLG+ +D S P Sbjct: 5 VLSRAQMESECIIMSLVYVERLLKTTSGFLQLRGENWRRLVFCSMVMASKVWDDLSMTNADFSKIWPELSLKQINELELVYLRAVEYNVRVSAVSYAKYYFHLRSMCALLGLVAA--FDESAP 125
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A7S2S551_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S551_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.430e-32 Identity = 63/132 (47.73%), Postives = 91/132 (68.94%), Query Frame = 2 Query: 2 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 385 + FY VF +Q+E DC+I+SL+YIER++ +T G++R +NWRSV+ ++L+SK+WDDLSMWNCDFSK+G SL+R N+LEVA+L L+Y V+V +S +A YYF +R G+ + L SP Sbjct: 113 ITAFYRDVFLRSQMEVDCIIISLIYIERLIKKTDGEVRPNVRNWRSVLFSCMVLSSKVWDDLSMWNCDFSKIGPSGVTFSLQRTNQLEVALLSHLEYKVKVNASEYAKYYFLLRSMLCRSGLASDTLSSLSP 244
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A7S1UIR8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIR8_9STRA) HSP 1 Score: 130 bits (327), Expect = 9.520e-32 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 11 FYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVE 358 FY YVF TAQLE+ C+I S +YIER L T+G+L + NWRSV+L GL LASKIWDD SMWN DFS VG +L +IN LE+A+L +Q++V + +L+ YY+ +R+ I L ++ Sbjct: 157 FYKYVFDTAQLEEMCIITSTIYIERALHMTSGRLLLTSSNWRSVLLAGLALASKIWDDFSMWNADFSDVGNITLTKINSLELAILSAIQWDVHIPRNLYTHYYYALRNLVIKLDLK 272
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A7S3DPP7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPP7_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.470e-31 Identity = 65/132 (49.24%), Postives = 87/132 (65.91%), Query Frame = 2 Query: 2 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 385 + FY VF AQ+E DCVIMSL+Y+ER++ T G LR NWRSV+ ++LASK+WDDLSMWN DFS+ +L+RINELE+AVL L+Y V+V +S +A YYF +R I G+ L + +P Sbjct: 67 ITTFYRDVFGRAQMESDCVIMSLIYVERLIKNTRGNLRPRATNWRSVLFSCMVLASKVWDDLSMWNGDFSQTCPAGVTFTLQRINELELAVLDALEYIVKVPASEYAKYYFLLRSMLIKSGLGGEDLNEMNP 198
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: K3X1X9_GLOUD (WW domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1X9_GLOUD) HSP 1 Score: 129 bits (324), Expect = 2.070e-31 Identity = 60/125 (48.00%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 17 SYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 388 +VF AQ+E +C+IMSL+Y+ER+L T+G L++ NWRS++ C +++ASK+WDDLSM N DFSK+ SL+ INELE+A L ++YNVRV++ +A YYF +R C +G+ +D S P Sbjct: 517 KHVFSRAQMESECIIMSLIYVERLLKATSGSLQLLGYNWRSILFCSMVMASKVWDDLSMCNADFSKIWPELSLKEINELELAYLSAVEYNVRVSAVSYAKYYFHLRSMCASMGMLAA--FDESAP 639
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A5D6XQX6_9STRA (WW domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQX6_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.750e-31 Identity = 58/116 (50.00%), Postives = 85/116 (73.28%), Query Frame = 2 Query: 11 FYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGV 355 F +VF AQ+E +C+IMSLVY+ER+L T+G L++ NWR+++ C +++ASK+WDDLSM N DFSK+ SL+ INELE+A L ++YNVRV++ +A YYF +R C +G+ Sbjct: 497 FIKHVFSRAQMESECIIMSLVYVERLLKATSGALQLRGSNWRAILFCSMVMASKVWDDLSMCNADFSKIWPELSLKEINELELAYLSAVEYNVRVSAVSYAKYYFHLRSMCASMGL 612
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Match: A0A3M6VCM7_9STRA (WW domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCM7_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.470e-30 Identity = 57/116 (49.14%), Postives = 86/116 (74.14%), Query Frame = 2 Query: 11 FYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGV 355 F +VF AQ+E +C+IMSLVY+ER+L T+G L++ +NWR ++ C +++ASK+WDDLSM N DFSK+ SL++INELE+ L ++YNVRV+++ +A YYF +R C +G+ Sbjct: 625 FVKHVFSRAQMESECIIMSLVYVERLLKATSGFLQLRGENWRRLVFCSMVMASKVWDDLSMTNADFSKIWPELSLKQINELELVYLSAVEYNVRVSAASYAKYYFHLRSMCASMGL 740 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5876.14340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5876.14340.1 >prot_L-elsbetiae_contig5876.14340.1 ID=prot_L-elsbetiae_contig5876.14340.1|Name=mRNA_L-elsbetiae_contig5876.14340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp GARVLLLCVQDGPAREGLRDHVLGVHREGSHGDRRQAQDLQKKLAFCDPVback to top mRNA from alignment at L-elsbetiae_contig5876:4045..6994+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5876.14340.1 ID=mRNA_L-elsbetiae_contig5876.14340.1|Name=mRNA_L-elsbetiae_contig5876.14340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2950bp|location=Sequence derived from alignment at L-elsbetiae_contig5876:4045..6994+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5876:4045..6994+ >mRNA_L-elsbetiae_contig5876.14340.1 ID=mRNA_L-elsbetiae_contig5876.14340.1|Name=mRNA_L-elsbetiae_contig5876.14340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig5876:4045..6994+ (Laminarionema elsbetiae ELsaHSoW15)back to top |