mRNA_L-elsbetiae_contig5868.14331.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: D8LQH6_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH6_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.830e-49 Identity = 205/570 (35.96%), Postives = 276/570 (48.42%), Query Frame = 2 Query: 2 MDDKNPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALPSLASPSQSSSSPLPAAKPIEQSCVD----PSKVSDATQSEGIAPTGTENILTLGEELACGKKGSDQNKASNDGXXXXXXNNMHAGIVGDERKVTVGSDPSEISNDVEKCGATANANEE---------------APLLSFSSSKADKNNSTKDC--VQSEENTLLLLPDSADPASTPASSRKDTEQVEKEDTDQPGVGVEE--LERETTARNGVKPDDSDQKKVEEAKGDTADYDANQRNQ---ETNNEGPSKS-----APGSLLLSSLAERMKDREERFRQEKKPCNEKGEGGE-VEDKIGN----------------KHPRPSKGSDHDRGGKINSRCGGGESAEASSVSARDACPDVHGAQTVEDARRAKLMKRKERFMAAPFAGSGNGPSDQSXXXXXXLLGEETSDELTTPRWKAASEAAAKMARRSERFGANESRPRVPRVRNLLSSAIVCDPRGTFLAELEDTSEANIGQSPLKSGGYSFDPLPQRRKRARATTTPPFKNDGTPAKRRGVGGGVA 1567 MD+KNPLKMKV++LK LGRRGLSQTGLKFDLAQRLQ+AMDVDEFG LPSL S Q SS LP+ +P VD P+ S+A SEG PT E + L K D N+A D N ++ + ++ VGS+ +I N G T+N EE +PL+S S + + ++ KDC V ++E L + + P++ ++ + + E+ G+G EE ++ TA + +K S EE D +A ++ + N++G S S +P SLL S + RMKDREERFRQEK EGGE E +GN +H SK D D + + G S VS++ TVED RAKLMKRKERF AAP SG+ + + L G S+++ + + A+ AAKM RR+ERFG P +SA V DPRG + Q + S DPLPQR+KRA+A P ++ G AKRR G GVA Sbjct: 1 MDEKNPLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLPSLLSTPQPWSS-LPSEEPKPSEQVDLIGGPAITSNAVLSEGTPPTAAEGSSGFEDPLINEGKEGDGNEAIVD----EPDRNTKGSVLTGQVRLEVGSE-CDIDNGK---GDTSNITEENNDTEQSSSVVIGILSPLVS--SDQKEDVSTGKDCEAVAADERPLPICESPTETPGAPSNPCEEKKMIAGEEDKHKGLGAEEKPTAQDATASDELKDHSSLTTTAEEKDCDKTAMEAMPQDAPEGDENHDGSSASLEGVMSPSSLLSCSQSVRMKDREERFRQEKTL-----EGGERTEGTVGNSKRGHDFGCAGAGGGGEHNNVSKDHDVDSKYTVGAARDGPTLGSGSDVSSKT--------WTVEDDCRAKLMKRKERFSAAPSKTSGSNGAGNARTEEP-LSGVVHSEKVVSGKQGASGSTAAKMLRRAERFGGTGGGSSAPSATP--ASAEVRDPRGGCFPGSSVIPKHGSKQQSPSAEISSLDPLPQRKKRAQAEAITPRRDGGLLAKRRRPGSGVA 543
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A6H5KS91_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS91_9PHAE) HSP 1 Score: 171 bits (434), Expect = 6.230e-43 Identity = 197/572 (34.44%), Postives = 266/572 (46.50%), Query Frame = 2 Query: 2 MDDKNPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALPSLAS-PSQSSSSPLPAAKPIEQSCVD----PSKVSDATQSEGIAPTGTENILTLGEELACGKKGSDQNKASNDGXXXXXXNNMHAGIVGDERKVTVGS--DPSEISNDVEKCGATANANEEA---------PLLSFSSSKADKNNSTKDC--VQSEENTLLLLPDSADPASTPASSRKDTEQVEKEDTDQPGVGVEELERET----TARNGVKPDDSDQKKVEEAKGDTADYDANQRNQ---ETNNEGPSKSAPGSLLLSSLAE-----RMKDREERFRQE------KKP--------------CNEKGEGGEVEDKIGNKHPRPSKGSDHDRGGKINSRCGGGESAEASSVSARDACPDVHGAQTVEDARRAKLMKRKERFMAAPFAGSGNGPSDQSXXXXXXLLGEETSDELTTPRWKAASEAAAKMARRSERFGANESRPRVPRVRNLLSSAIVCDPRGTFLAELEDTSEANIGQSPLKSGGYSFDPLPQRRKRARATTTPPFKNDGTPAKRRGVGGGVA 1567 MD+KNPLKMKV++LK LGRRGLSQTGLKFDLAQRLQ+AMDVDEFG LPSL S P SS +KP EQ VD P+K S A EG PT E + L K SD +A+ N ++ + + GS D +D+ N E++ PL+S S + + ++ KDC V ++E L + + P+S ++ + + E+ +G++E E+ T TA + +K S EE D +A ++ E N+ G S S +L SSL RMKDR+E FRQE ++P C E G+GGE H S+ D D + + G S VS+R TVED RAKL+KRKERF AAP SG+ + + L G S+++ + + AAKM RR+ERFG P +SA DPRG T + + S DPLPQR+KRA+A T P ++ G+P KRR G GVA Sbjct: 1 MDEKNPLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLPSLLSTPQPWSSLSSVESKPSEQ--VDLTGGPTKTSHAVLHEGAPPTVAEGSSAFEDPLINEGKESDGIEAN----VHEPDRNTKGPVITGQVSLAAGSECDVDNSKDDMSNINEENNCTEQSSSVVNDISSPLVS--SDQKEDVSTGKDCETVATDERPLPICGSPTETPGAPSSPCEEKKIIRGEEDKH--IGIKEEEKSTAQDVTASDELKDHSSPTTMAEEKDCDKTAVEAMPQDVPEGEENHHGSSASLQAVMLPSSLQSCSQSVRMKDRQEGFRQETTLEGGERPEGTVGNSKRGRTFSCAEAGDGGE--------HNNVSEDHDVDSKRTVGAARDGQGLGSGSGVSSRT--------WTVEDDCRAKLIKRKERFSAAPSKMSGSNATGTARREEP-LSGVVHSEKVVSGKQGGIDSTAAKMLRRAERFGGTGGGTSAPSATP--ASAEERDPRGGCFPGSNVTPTHGFKRQSPSAEISSLDPLPQRKKRAQAEATTPRRDGGSPEKRRRPGSGVA 543
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A8K1C8N1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8N1_PYTOL) HSP 1 Score: 61.6 bits (148), Expect = 5.120e-7 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 2 Query: 14 NPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALPSLASPSQSSSSPLPAAKPIEQSCVDPSKV 235 NP KMKVSEL+ L RGLS GLK +L QRL+ A+D +EFG+ +P +SSSP AA+P +Q +KV Sbjct: 7 NPKKMKVSELRAELESRGLSSNGLKSELIQRLEMALDEEEFGSAAEDLAPPAASSSPTKAAEPKKQPAPTETKV 80
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A024UH29_9STRA (SAP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UH29_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.500e-6 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 14 NPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALPSLASPSQSSSSPLPAAKPIEQSCVDPSKVSDATQS 253 NP KMKV+E+K+ L +RGLSQTGLK +L QRL+ A+D +EFG L SSP+ A + ++ V P+ V T S Sbjct: 5 NPKKMKVNEIKDELAKRGLSQTGLKPELIQRLELALDEEEFGGL------DVPESSPVSTAVAVVENEVAPTVVMKKTDS 78
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A425D5Z6_9STRA (SAP domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D5Z6_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.050e-6 Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 2 Query: 14 NPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALP-------SLASPSQSSSSPLPAAK--------------------------PIEQSCVDPSKVSDATQSEGIAPT 271 NP KMKV+E+K+ L +RGLSQ GLK +L QRL+ A+D +EFG + S A + ++P P AK P+ + V+PS + AT + +APT Sbjct: 5 NPKKMKVNEIKDELAKRGLSQAGLKPELIQRLELALDEEEFGGMDGPDSTPVSAAVEVEKVAAPAPVAKKADSIRNLLNDDSSSVQSPVVAAVSAPVNVAVVEPSTTTTATSASNVAPT 123
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A6G0XW40_9STRA (SAP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW40_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.800e-5 Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 14 NPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGAL 145 NP KMKV+E+K+ L +RGLSQ GLK +L QRL+ A+D +EFG + Sbjct: 5 NPKKMKVNEIKDELAKRGLSQAGLKAELIQRLELALDEEEFGGM 48
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.280e-5 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 2 Query: 2 MDDKNPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALP 148 M + NP KMKV++LK L +R L TGLK DL QRLQ+A+D +EFG P Sbjct: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAP 49
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A485LKI8_9STRA (Aste57867_22323 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKI8_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 9.020e-5 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 2 Query: 14 NPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFG 139 NP KMKV+E+K+ L +RGLSQ GLK +L QRL+ A+D +EFG Sbjct: 5 NPKKMKVNEIKDELAKRGLSQAGLKPELIQRLELALDEEEFG 46
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Match: A0A0W8D313_PHYNI (SAP domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D313_PHYNI) HSP 1 Score: 53.9 bits (128), Expect = 9.730e-5 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 14 NPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGA 142 NP KMKVSEL+ AL RGLS GLK +L QRL+ A+D +EFG+ Sbjct: 8 NPKKMKVSELRAALESRGLSSNGLKTELIQRLELALDEEEFGS 50 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5868.14331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5868.14331.1 >prot_L-elsbetiae_contig5868.14331.1 ID=prot_L-elsbetiae_contig5868.14331.1|Name=mRNA_L-elsbetiae_contig5868.14331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=522bp MDDKNPLKMKVSELKEALGRRGLSQTGLKFDLAQRLQSAMDVDEFGALPSback to top mRNA from alignment at L-elsbetiae_contig5868:4297..7653- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5868.14331.1 ID=mRNA_L-elsbetiae_contig5868.14331.1|Name=mRNA_L-elsbetiae_contig5868.14331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3357bp|location=Sequence derived from alignment at L-elsbetiae_contig5868:4297..7653- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5868:4297..7653- >mRNA_L-elsbetiae_contig5868.14331.1 ID=mRNA_L-elsbetiae_contig5868.14331.1|Name=mRNA_L-elsbetiae_contig5868.14331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3132bp|location=Sequence derived from alignment at L-elsbetiae_contig5868:4297..7653- (Laminarionema elsbetiae ELsaHSoW15)back to top |