mRNA_L-elsbetiae_contig5846.14301.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5846.14301.1
Unique NamemRNA_L-elsbetiae_contig5846.14301.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: D8LGJ4_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 1.100e-95
Identity = 158/193 (81.87%), Postives = 176/193 (91.19%), Query Frame = 2 
Query:  452 MGGIMTKSAPAPFRTVEILREGLTPGQEQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAPGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSAPT 1030
            MG I+T+    PFRT++ILREG+  GQEQ AMADN VVTSKYN++TF+PRSLFEQFRRIAN+YFLVIS+LMM+GWYT LF SPLAPFST+IPLI+VL+VTMVKDGAEDLKRHRSD RVNNTE TA+DIH  G FVPVAWKD+KVGMIV+I DKEEIPADVVLL+SSEPGGVAYIETANIDGETNLKIRTSAPT
Sbjct:    1 MGAILTRPEIKPFRTIDILREGVIGGQEQSAMADNSVVTSKYNVITFVPRSLFEQFRRIANVYFLVISVLMMLGWYTDLFESPLAPFSTIIPLILVLSVTMVKDGAEDLKRHRSDNRVNNTEATAMDIHTRGGFVPVAWKDVKVGMIVKIADKEEIPADVVLLSSSEPGGVAYIETANIDGETNLKIRTSAPT 193
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: A0A836CHZ9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.390e-62
Identity = 114/182 (62.64%), Postives = 144/182 (79.12%), Query Frame = 2 
Query:  488 FRTVEILREGLTPGQEQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTE-GTALDIHAPGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSAPT 1030
            +RT++ +R G +  +EQ A+ DN + T+KYNL+TF+PRSLFEQFRR ANIYFLVIS+LM++G YT+LF SPL PFSTLIPL+MVL +TM K+G EDLKRHRSD  VNN      L    PG F  VAW+ ++VG IV++ + +EIPAD+VLL SSEP G AY+ET+NIDGETNLKIR++APT
Sbjct:  108 YRTIDAVRGGFSVSKEQRAIPDNSIDTAKYNLITFLPRSLFEQFRRAANIYFLVISVLMVLGTYTSLFNSPLTPFSTLIPLVMVLVITMGKEGIEDLKRHRSDHLVNNRRMAEVLSTLNPGAFDRVAWRKVRVGNIVQVHNGDEIPADMVLLASSEPNGAAYVETSNIDGETNLKIRSAAPT 289
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: A0A6H5JDA0_9PHAE (PhoLip_ATPase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDA0_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 6.440e-55
Identity = 90/117 (76.92%), Postives = 105/117 (89.74%), Query Frame = 2 
Query:  452 MGGIMTKSAPAPFRTVEILREGLTPGQEQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKR 802
            MG I+T+    PFRT++ILREG+  G+EQ AMADN VVTSKYN++TF+PRSLFEQFRRIAN+YFLVIS+LMM+GWYT LF SPLAPFSTLIPLI+VL+VTM+KDGAEDLKRHRSD R
Sbjct:    1 MGAILTRPEIKPFRTIDILREGVIAGEEQSAMADNSVVTSKYNVITFVPRSLFEQFRRIANVYFLVISVLMMLGWYTDLFESPLAPFSTLIPLILVLSVTMIKDGAEDLKRHRSDNR 117
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: A0A482UDJ0_9ARCH (PhoLip_ATPase_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UDJ0_9ARCH)

HSP 1 Score: 180 bits (456), Expect = 4.010e-50
Identity = 89/162 (54.94%), Postives = 119/162 (73.46%), Query Frame = 2 
Query:  533 EQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWY-TTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAPGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIR 1015
            E     DN + TSKY  ++FIPRSLFEQFRRIAN+YF  ISI+M +G Y   +F SPL+P+STL PL +VLA+TM+K+G ED KRHRSD  VNN   +   +H  G    V WKDI+VGM++++ ++ E+PAD+++L +SEP    Y+ET+NIDGETNLK+R
Sbjct:  143 EDNGYGDNFITTSKYTWISFIPRSLFEQFRRIANVYFFGISIVMFIGTYFPKVFESPLSPYSTLGPLCLVLAITMLKEGIEDFKRHRSDHEVNNRMASV--VHVDGSIKQVPWKDIRVGMVLKLPNRSEVPADIMVLQTSEPRAACYVETSNIDGETNLKLR 302
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: A0A7S4DIG8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIG8_HETAK)

HSP 1 Score: 175 bits (443), Expect = 5.650e-50
Identity = 95/176 (53.98%), Postives = 119/176 (67.61%), Query Frame = 2 
Query:  479 PAPFRTVEILREGLTPGQEQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAP-------GQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETAN 985
            P P R +        P  EQ   A N V T+KYNLVTF+PR+LFEQFRR+AN+YFLVISILM++G YT  F SP+ P+ST+ PL++++ + M K+G EDLKRH+SDK  NN +   LD  A        G  V  AWKDI+ G IV + D+E IPAD+VLL SSEP G AY+ETAN
Sbjct:   36 PEPNRQITAYTSAQDPPPEQ-EFATNAVHTAKYNLVTFLPRALFEQFRRLANVYFLVISILMIIGTYTDYFDSPVTPWSTIGPLVIMITIIMAKEGMEDLKRHQSDKFTNNQKALVLDPTAAAEKGWDSGALVETAWKDIRPGDIVCVQDREPIPADLVLLASSEPSGQAYVETAN 210
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: W7TQX5_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX5_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.020e-48
Identity = 96/187 (51.34%), Postives = 130/187 (69.52%), Query Frame = 2 
Query:  500 EILREGLTPGQEQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAPG----------QFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSAPT 1030
            E  RE  +   ++    DN V T+KYNL TFIPR+LFEQFRR+ANIYFLV+++LM++G Y+  + SPL P++TLIPL +VL +TM K+  EDLKRH +D++ NN     + +  PG              V W+DI VG +V++ D+EEIPAD+VLLTSS+ GG  Y+ET+NIDGETNLKI+ +A T
Sbjct:   97 EHTRETKSGKPKRVKYPDNSVSTAKYNLFTFIPRALFEQFRRLANIYFLVVTVLMLIGTYSDFYESPLTPYTTLIPLCVVLTITMGKEAFEDLKRHTADQKTNNRIARVVRLERPGCRGAGGDENGGIEEVRWRDIGVGRVVQVRDREEIPADLVLLTSSDAGGNCYVETSNIDGETNLKIKEAART 283
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: W7TGI1_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.310e-48
Identity = 91/163 (55.83%), Postives = 124/163 (76.07%), Query Frame = 2 
Query:  542 AMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAPGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSAPT 1030
            A  +N V TSKY +++F P+SLFEQFRR+AN+YFLVI IL+M+G YT LF +PL P++TL PL++VLAVTM K+G ED+KRH +D+  N      L +  PG+F  +  ++I+VG +VR+ DK+ +PAD++LLTSSE  G  Y+ET+NIDGETNLKIR +A T
Sbjct:   37 AYCNNSVSTSKYTVLSFFPKSLFEQFRRLANVYFLVIIILLMLGTYTPLFDAPLTPYTTLFPLLVVLAVTMGKEGFEDVKRHIADRETNTAPVEMLSLEKPGEFDSMQRQEIRVGRVVRVLDKQMVPADMILLTSSEAEGSCYVETSNIDGETNLKIRQAAKT 199
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: A0A7S2SHN7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHN7_9STRA)

HSP 1 Score: 171 bits (432), Expect = 9.360e-48
Identity = 86/189 (45.50%), Postives = 127/189 (67.20%), Query Frame = 2 
Query:  461 IMTKSAPAPFRTVEI-LREGLTPGQEQCAMADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAPGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSA 1024
            I    A  P+RT+E+   E   P   Q     N V TSKY  VTF+P+  FEQFRR+ANIYFLVISI+M +G Y  ++ S L P++T+ PL++++ +T+ K+G ED KRH++D+ +N+ +   L     G F+ + W +++ GM+V++ +++E+PAD++ L SSE  G  YIETANIDGETNLK+R  A
Sbjct:    5 IEVPQADEPWRTIELRCSEDKAPAPGQVGSLSNAVTTSKYTFVTFLPKGTFEQFRRVANIYFLVISIMMALGTYAEVWFSSLDPWTTVGPLLLIVGLTLAKEGFEDSKRHKADQEMNSRQVEVL-AGPGGNFMEIQWAELQPGMVVKVTERQEVPADLIPLVSSEEEGKCYIETANIDGETNLKLRQCA 192
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: F0YJC7_AURAN (Phospholipid-transporting ATPase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC7_AURAN)

HSP 1 Score: 181 bits (458), Expect = 5.120e-47
Identity = 96/162 (59.26%), Postives = 119/162 (73.46%), Query Frame = 2 
Query:  548 ADNKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHA---PGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSA 1024
            +DN + T KYN +TF+PRSLFEQFRR AN YFL+IS+LM++G YT LF SPL  +ST+ PL ++LA+TM K+G EDLKRH+SD+ VNN+E   L       PG    VAWK I  G IV + D+EEIPAD+VLL SSE G   Y+ET+NIDGETNLKI+  A
Sbjct:   44 SDNSITTHKYNALTFLPRSLFEQFRRTANQYFLLISLLMIIGTYTDLFYSPLTAWSTIGPLSLILAITMTKEGIEDLKRHKSDEHVNNSEARILSNSPETPPGTVETVAWKAIAPGQIVLVKDREEIPADLVLLWSSE-GAQCYVETSNIDGETNLKIKRPA 204
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BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Match: A0A7S1CBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBW1_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.100e-46
Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = 2 
Query:  554 NKVVTSKYNLVTFIPRSLFEQFRRIANIYFLVISILMMVGWYT-TLFVSPLAPFSTLIPLIMVLAVTMVKDGAEDLKRHRSDKRVNNTEGTALDIHAPGQFVPVAWKDIKVGMIVRICDKEEIPADVVLLTSSEPGGVA----YIETANIDGETNLKIR 1015
            N V T KYNLVTF+PRSLFEQFRR+AN YFLVISILM++G     +F SPL+P+STL PL++VL +T+VK+GAEDLKR R+D+ VN     A  +   G  + VAW D+ VGM+VR+ ++ E+PAD+V++ S+E         Y+ET+NIDGETNLKIR
Sbjct:   64 NAVSTQKYNLVTFLPRSLFEQFRRLANCYFLVISILMLIGTENPAIFDSPLSPYSTLGPLVLVLTITIVKEGAEDLKRFRADREVNARR--ARVVGDDGAMLDVAWDDLAVGMVVRVDNRSEVPADMVVVWSTEGAEAGTPTCYVETSNIDGETNLKIR 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5846.14301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGJ4_ECTSI1.100e-9581.87Phospholipid-transporting ATPase n=1 Tax=Ectocarpu... [more]
A0A836CHZ9_9STRA1.390e-6262.64Phospholipid-transporting ATPase n=1 Tax=Tribonema... [more]
A0A6H5JDA0_9PHAE6.440e-5576.92PhoLip_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A482UDJ0_9ARCH4.010e-5054.94PhoLip_ATPase_N domain-containing protein (Fragmen... [more]
A0A7S4DIG8_HETAK5.650e-5053.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TQX5_9STRA1.020e-4851.34Phospholipid-transporting ATPase n=2 Tax=Monodopsi... [more]
W7TGI1_9STRA1.310e-4855.83Phospholipid-transporting ATPase n=2 Tax=Monodopsi... [more]
A0A7S2SHN7_9STRA9.360e-4845.50Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F0YJC7_AURAN5.120e-4759.26Phospholipid-transporting ATPase n=2 Tax=Aureococc... [more]
A0A7S1CBW1_9STRA1.100e-4656.60Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5846contigL-elsbetiae_contig5846:3903..7770 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.9
Seed ortholog evalue1.6e-84
Seed eggNOG ortholog2880.D8LGJ4
Preferred nameDNF3
KEGG rclassRC00002
KEGG koko:K01509,ko:K01530,ko:K14802
KEGG TC3.A.3.8
KEGG ReactionR00086
KEGG Pathwayko00230,ko04742,map00230,map04742
Hectar predicted targeting categoryother localisation
GOsGO:0000749,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0005802,GO:0005886,GO:0005937,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006892,GO:0006900,GO:0006996,GO:0008104,GO:0008150,GO:0009987,GO:0010033,GO:0010876,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015914,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019236,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030427,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032456,GO:0033036,GO:0034204,GO:0034613,GO:0042221,GO:0042623,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043492,GO:0043900,GO:0043902,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045332,GO:0046907,GO:0046999,GO:0048193,GO:0048194,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051286,GO:0051641,GO:0051649,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0070867,GO:0070887,GO:0071310,GO:0071444,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:0097708,GO:0098791,GO:0120025,GO:0120038,GO:2000241,GO:2000243
EggNOG free text desc.phospholipid-translocating ATPase activity
EggNOG OGsCOG0474@1,KOG0206@2759
EC3.6.1.3,3.6.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Exons3
Model size1032
Cds size579
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5846.14301.1prot_L-elsbetiae_contig5846.14301.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5846 3903..7319 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.5005803-CDS-L-elsbetiae_contig5846:3902..40441622816630.5005803-CDS-L-elsbetiae_contig5846:3902..4044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5846 3903..4044 -
1691683697.8353505-CDS-L-elsbetiae_contig5846:3902..40441691683697.8353505-CDS-L-elsbetiae_contig5846:3902..4044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5846 3903..4044 -
1622816630.5152845-CDS-L-elsbetiae_contig5846:4868..49541622816630.5152845-CDS-L-elsbetiae_contig5846:4868..4954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5846 4869..4954 -
1691683697.8469625-CDS-L-elsbetiae_contig5846:4868..49541691683697.8469625-CDS-L-elsbetiae_contig5846:4868..4954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5846 4869..4954 -
1622816630.5285864-CDS-L-elsbetiae_contig5846:6968..73191622816630.5285864-CDS-L-elsbetiae_contig5846:6968..7319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5846 6969..7319 -
1691683697.858454-CDS-L-elsbetiae_contig5846:6968..73191691683697.858454-CDS-L-elsbetiae_contig5846:6968..7319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5846 6969..7319 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.5431764-UTR-L-elsbetiae_contig5846:7319..77701622816630.5431764-UTR-L-elsbetiae_contig5846:7319..7770Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5846 7320..7770 -
1691683697.8672214-UTR-L-elsbetiae_contig5846:7319..77701691683697.8672214-UTR-L-elsbetiae_contig5846:7319..7770Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5846 7320..7770 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5846.14301.1

>prot_L-elsbetiae_contig5846.14301.1 ID=prot_L-elsbetiae_contig5846.14301.1|Name=mRNA_L-elsbetiae_contig5846.14301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
MGGIMTKSAPAPFRTVEILREGLTPGQEQCAMADNKVVTSKYNLVTFIPR
SLFEQFRRIANIYFLVISILMMVGWYTTLFVSPLAPFSTLIPLIMVLAVT
MVKDGAEDLKRHRSDKRVNNTEGTALDIHAPGQFVPVAWKDIKVGMIVRI
CDKEEIPADVVLLTSSEPGGVAYIETANIDGETNLKIRTSAPT
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mRNA from alignment at L-elsbetiae_contig5846:3903..7770-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5846.14301.1 ID=mRNA_L-elsbetiae_contig5846.14301.1|Name=mRNA_L-elsbetiae_contig5846.14301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3868bp|location=Sequence derived from alignment at L-elsbetiae_contig5846:3903..7770- (Laminarionema elsbetiae ELsaHSoW15)
GGGCATCTGGGATCGAGACAAAGAGGCGGTCACGGTCACAGCAGGTGAAG
GCCCAGGTTGGATTGCCGAAGGAAGGGTGTGTGCGGCGTACGTCTCTCCT
TCCGTGTGAGGCGTTGGGCGGTGAGACCTGGCACAACCGCGGCTTCGCTG
GCTTTGGGCTGCAGGCGAGCGGCGGCATAAAGACAGTAGAGAGAGCACCC
CGCTACGCCGCCGGTCACACGCGCCTTCAAGCTCTACTGCAGAGGTAACC
CAACCCCATACCTCATCTGCTAGTGCTGCTACTCCCGAGCTTGGTTCCTT
CGTTACGCTATACGGCTCTCTGTCCACCGGTCACCTTTCCAGTTTGTTGG
GAAGGCGAGCCGAGCTAGAGCTACACCGAGAGAGGGAGCATCATCATCAT
CTCTACCGCGGTCGCTTGCCTCTCCAGCAGGACAGCCGGGGCAGCAGCAC
CATGGGCGGGATCATGACTAAGTCGGCTCCGGCCCCCTTTAGGACGGTAG
AAATCCTAAGAGAGGGGCTAACCCCGGGGCAAGAGCAATGCGCGATGGCG
GACAACAAGGTTGTTACCTCCAAGTACAATCTGGTAACCTTCATTCCGAG
GTCGCTCTTCGAGCAGTTCCGGCGCATCGCAAACATCTACTTCTTGGTGA
TCAGCATCCTGATGATGGTGGGCTGGTATACGACGCTGTTCGTCTCGCCC
TTGGCACCTTTCTCCACGCTGATCCCGCTTATCATGGTGCTCGCCGTCAC
GATGGTCAAGGACGGAGCGGAAGACCTAAAACGGCATCGTTCCGACAAAC
GGGTGTGTGCATCAGTGTGCATATTTTGATTTTGCCCTGGATTAACAGAT
ACACCATTTTGTTCTGTTACGATTGGAGACATGCCGTTCGTGTTTGACTT
AGCCGATGCGTGTGGTGGGTTCAGAGAGTGTGTGCAATGCCTGTCCCCAA
CAGGTTCTGCCACACGTATACACCGCTGATGCCTTTTGTTCCGCGCAGCA
GGCCCGAGGTCGGGTGTCGGCGTGTGTCCGGTTTGTTTCCCTGCACCTGA
AAAATTTCGTCCGCTCTTGTTTGTGATTTGTGCAGATTGTATCGTACAAT
AGTTCCCGCTGCAACCGCAAAACCAAATGGAGAGTATTTGTGGACCCTCT
TACTTAATCCCCGCGCTGGCTGGTACTAGGTAGCGTGTGTTGTATCTTTG
GTTCCATATCTTCTGCGTAGTGTCTGTTGGCTCCACCAACACTGCTGTTG
TTGGGTTTATCTAAGTCGTCACGGCCTCCGCGTGCCTTCGGTTGCTTCGC
CCCCCCCCCCCCCGACCTACGCATGTTCTTGCTGTTGTCTTCACATTAAA
GACGTCTGATCACTCTATCTAATACCTTCCATGGGCGAATCCGTACTGAT
TATTCCAACACCGACGCGGTCGATTCCCGTGGTCACAGGATAACTTACCC
TCAAAGGGGTAACAGACTACTGAAAAACATTACAGGGCCGTCTCAATGTG
GGTTTGGTTCCATTTTTGATTACCTGGTTTCTCCTTTCAAAACGTTTTTG
ATTATCTGATTTGTCTTTCAAAACGATCAGACACAGATAGTCCGGAGCCC
TCCGCTTCCCTCTACACGCTAGGTACGATATGTGAGGTGAAAAACCGGAT
GAGCCAACACCACCACACCGCGGGGGATTTGCATGTGTACGTTGTTTTCA
AATAGTATTTGGAAAGTATGCGTCGATCACGCCATAGATACGCTGCGGCA
CATAACGCGATCCATGCGAGACGCCGACTACATGCCAAGGGGCGGGCGCC
CGACGACTACACCAGGAAGTGCATGGTGCATTGCTGTGTTTGTTTTTAAA
ATGGTCGGTCCGTGTGCGTGCGGACACTAGATATTATTTTTAAATTTGTT
TGTCCGTGCGAGCGGACACATAACGGTGTTGTCGTCACACTGCTGTAACC
CAGGCACCCACCCCACTGCCACTGACGAACTACTGTATTACGGGTTTTGT
GCGAATATATCTTGGACTGGAAGAGGTGGGGTTACTATGCCTACAGCAGT
CCCTCTGGAACGGCTTTTTCTCAGACTGAACGTAGTAGACTGCCGACATT
TGTGTACATGCATTAAAAAGGCCGCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCCGTCTCTCCTCTCACGCGT
CGCTCTGTCATTGATTGCAATGTTCGACACTTAAACACGCACGGCCAAAA
CCTCACGAAGAACATCGTGCAAAGCACAGCAGTATGTATGTACAAGCACA
TATTGTACATGTGTAGTATAAGTAGGCGTGCTGCTGTGTCACGCAAAACA
ACCACACAGGCGCGGATGATATGAGGGGGGGGCGGGAGGCAGCGGCCACA
TCCCGTGGTCTGCGAAATGAAATTGACTCTACATTGCCCCCGGCGACCAG
AGTCCACCCTCCTTGGCGGTGGTACCGCACGGTTTTTACCCGAGGGCGCA
CGCGCACATATCCAGAAATGCCCCGGTTTATTCGTAAAAAGCCCGCAACG
TGTGTAACTCCTGTGTAATTGCTGTCGCCGATTTCATAGGAGCAGTTGGG
TAGACCAACCGATACCTGTCGTCCCGCAACGCTCCGCCAGCGAACGCCGC
GTCCCGTTATATGGGAGCAGACAGGCACACACGCGCTCTTCAGCGGCCAG
TGGGTCTCTAGAACGTGCCGGTTTTTTCCGAACAAATCTTAATCTCTATT
GTATCGAGGTTGCTGACGTCGAACGGAATGTTTCGTCTCTTTTTGTGAAA
CAACTCGAAATCATAGGTCAACAACACCGAGGGCACAGCCCTGGACATCC
ATGCCCCGGGGCAGTTCGTCCCCGTCGCTTGGAAGGATATCAAGGTTGGC
ATGTGAGTTTATGCGATGGAATCCGGACTATCTTATCCTAGATATAAAGT
ACCTCAAAGCATTTTGTTGCCGTTGTTGTTTTTTTGCGTTTTTTTTTCTT
CTTTTTCACATTTATTTCCAGTGCTCGATGGGCTCCCTGTCACGAGGACA
TCTTGCCAGAGTACTGAACCATGATCACACAGAAGGGTTCCTTTCCCCAA
GGCCACCACCCCCCCCGTCTGCGGTGCTTGCCTGAGATTTGTTCTTGCGC
ATGGGACTGTCGCCAAAATAAATGGGAAGGACACACACACACAACACACA
AATACAAACCTTACACATGTAGCAGCGAGTCGTGTTGTGTGCCCAAACTG
CTTGTGATGCTGCTGTGTTAGCGTAAAACTCGGCCTTGTATCACCGCCAT
CTCGCCTCCGGTACACACACAGAGTATCACGTCGAAGTCCACAACCTCCC
GATTTCGAGTACATATAAGTTATGCATGAAGAAGAAAAAAAAATGAGTTG
CCTATGTACAGCTCAAAGATTTTTAGGCCACATCATTGCTTTATCTCTCC
GGGGTGGGGTTGAGGATCGCCTTGTTTCGTGCCCCCCCCCCCTCCCCCCC
GCCAGTACAATAAGTGCCAGTCTTAGCTTTTGTTGTTTCTGTGCGGTGCG
GGAGGGGGGCTCTCCGTGGAAAATGGTGGGGCTCGAGAGACGTTTTCGGC
GAGCACGGAGCCCCCGCGTGTTGAGTTGCGACGTTCGTTCGTGTCTGTTT
TTTTTCGATTGTCGAAACTTCCCGATGGTGTGATCAATCACGTCTCCCCC
CCCTCCCCCCCCCCCCGCGCGCTCAGGATCGTGCGAATCTGTGACAAAGA
GGAGATCCCCGCAGACGTGGTGCTCCTAACGTCCTCCGAACCCGGGGGCG
TGGCGTACATCGAGACCGCCAACATCGACGGAGAGACGAACCTCAAGATC
AGGACGAGCGCCCCCACG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5846:3903..7770-

>mRNA_L-elsbetiae_contig5846.14301.1 ID=mRNA_L-elsbetiae_contig5846.14301.1|Name=mRNA_L-elsbetiae_contig5846.14301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig5846:3903..7770- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGGGATCATGACTAAGTCGGCTCCGGCCCCCTTTAGGACGGTAGA
AATCCTAAGAGAGGGGCTAACCCCGGGGCAAGAGCAATGCGCGATGGCGG
ACAACAAGGTTGTTACCTCCAAGTACAATCTGGTAACCTTCATTCCGAGG
TCGCTCTTCGAGCAGTTCCGGCGCATCGCAAACATCTACTTCTTGGTGAT
CAGCATCCTGATGATGGTGGGCTGGTATACGACGCTGTTCGTCTCGCCCT
TGGCACCTTTCTCCACGCTGATCCCGCTTATCATGGTGCTCGCCGTCACG
ATGGTCAAGGACGGAGCGGAAGACCTAAAACGGCATCGTTCCGACAAACG
GATGGGCGGGATCATGACTAAGTCGGCTCCGGCCCCCTTTAGGACGGTAG
AAATCCTAAGAGAGGGGCTAACCCCGGGGCAAGAGCAATGCGCGATGGCG
GACAACAAGGTTGTTACCTCCAAGTACAATCTGGTAACCTTCATTCCGAG
GTCGCTCTTCGAGCAGTTCCGGCGCATCGCAAACATCTACTTCTTGGTGA
TCAGCATCCTGATGATGGTGGGCTGGTATACGACGCTGTTCGTCTCGCCC
TTGGCACCTTTCTCCACGCTGATCCCGCTTATCATGGTGCTCGCCGTCAC
GATGGTCAAGGACGGAGCGGAAGACCTAAAACGGCATCGTTCCGACAAAC
GGGTCAACAACACCGAGGGCACAGCCCTGGACATCCATGCCCCGGGGCAG
TTCGTCCCCGTCGCTTGGAAGGATATCAAGGTTGGCATGTCAACAACACC
GAGGGCACAGCCCTGGACATCCATGCCCCGGGGCAGTTCGTCCCCGTCGC
TTGGAAGGATATCAAGGTTGGCATGATCGTGCGAATCTGTGACAAAGAGG
AGATCCCCGCAGACGTGGTGCTCCTAACGTCCTCCGAACCCGGGGGCGTG
GCGTACATCGAGACCGCCAACATCGACGGAGAGACGAACCTCAAGATCAG
GACGAGCGCCCCCACGGATCGTGCGAATCTGTGACAAAGAGGAGATCCCC
GCAGACGTGGTGCTCCTAACGTCCTCCGAACCCGGGGGCGTGGCGTACAT
CGAGACCGCCAACATCGACGGAGAGACGAACCTCAAGATCAGGACGAGCG
CCCCCACG
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