mRNA_L-elsbetiae_contig583.14272.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE) HSP 1 Score: 345 bits (885), Expect = 2.190e-118 Identity = 174/228 (76.32%), Postives = 195/228 (85.53%), Query Frame = 1 Query: 1 MDAVHRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEEEGARAGRHDD----GGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAEMGDC 672 MD V+ QQGW +A+VDILVEF+EAA HSLLH+RR YP DIFERRRKYGVPVWMSRHPELN+YI +VLLR K LME GVVR+VLVCFF EHVDQAPVERVAF VRV+ DG SVD SLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHE+ + GRHD +SPVRSA+RGGKW+LAD+ A GV+AEPG+R++VPIKSVRGRGL+L+LS EMGDC Sbjct: 1 MDGVY-QQGWSEAVVDILVEFLEAATHSLLHSRRTYPQDIFERRRKYGVPVWMSRHPELNAYISEVLLRVKLLMEQGVVRRVLVCFFLEEEHVDQAPVERVAFDVRVDNDGDDSVDSTSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDC 227
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A835YLW3_9STRA (HORMA domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW3_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.380e-31 Identity = 75/198 (37.88%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 46 DILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQ---DVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEP-GQRQLVPIKSVR 627 D+L+EF+EAA+H+ LHAR +FERRR Y VPVWMSRHPELN YI Q L A+ L+ ++ +V +CF + ++++ F ++E PI+L ++E LR+ L++I S A LP+R+GCTF+L + G G A+ +A G KWL++D P G+ ++VP++SVR Sbjct: 31 DVLLEFLEAAIHTTLHAR-----GMFERRRAYEVPVWMSRHPELNEYIAQALANARPLLVERLLHRVYLCFKRENGAIEES------FVFELQESDDAPAGPITLDAVTELEAHLRAVLVKINMSGAALPSREGCTFSLLI----------GCAGAGAATARAAAAAGDKWLVSDAQD----GRPAGELRVVPVRSVR 203
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: UPI000624F878 (mitotic spindle assembly checkpoint protein MAD2B isoform X1 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI000624F878) HSP 1 Score: 104 bits (260), Expect = 3.330e-24 Identity = 66/207 (31.88%), Postives = 107/207 (51.69%), Query Frame = 1 Query: 46 DILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEH--GVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHL-PTRQGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSA 657 DIL+EF+E A H +L R LYP +IF R++ YG+ V +S HPELNSYI +VL + L+ H +RK+++CF+K DQ PVE+ F + DP L+ E+ LR+ L++ S ++L P Q TF++ + HE + P W+ + + + + ++ L+P+K++ L L + A Sbjct: 10 DILLEFLEVAFHQILFVRNLYPKEIFVRKQIYGIGVQISEHPELNSYIKEVLNSIRELIRHEENCIRKIVLCFYKE----DQTPVEQFVFDLSNLRANLAVKDPFFLK-TEESLRTLCLKLSTSGSYLKPLPQNTTFSIQIHTHEAAHVSLSENPKCDNFP---------WIEVEGETVSI----KEQTLLPLKTINTEYLKLQMYA 198
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A6P4YFT9_BRABE (mitotic spindle assembly checkpoint protein MAD2B-like n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YFT9_BRABE) HSP 1 Score: 103 bits (256), Expect = 1.530e-23 Identity = 68/222 (30.63%), Postives = 113/222 (50.90%), Query Frame = 1 Query: 7 AVHRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTR-QGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAEMGD 669 ++H+ DI+ EF+E A H +L+ R++YPP IF+RR+KY +PV MS HP++N Y+ L + L+E G V KV++ + P+ER F V + D L+ +E LR+ +L+I + L T Q TF++HV + A + + V+ W+ AD+D+L + P R ++P+K++ + + L E GD Sbjct: 5 SIHQDINVAQIAADIVCEFLEVAFHQILYIRQVYPPGIFQRRKKYNIPVQMSCHPDVNQYLQDTLQTIRPLVEKGEVEKVVL----NVTNCQARPLERFVFEVTPPVQPSVNDDSYLLR-LEQALRAFVLKINVCDSMLDTLPQDVTFSIHVYTQDSAAA---------SLEQQQLVQNFPWVEADSDSLRM---PNAR-IIPLKTMTSNVIKMQLYVEEGD 208
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: MD2L2_XENLA (Mitotic spindle assembly checkpoint protein MAD2B n=12 Tax=Tetrapoda TaxID=32523 RepID=MD2L2_XENLA) HSP 1 Score: 102 bits (255), Expect = 2.100e-23 Identity = 79/222 (35.59%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660 M + RQ + + DIL EF+E AVH +L+ R +YP IF++R+KY VPV MS HPELN YI L K L+E V KV+V H PVER F + S D + L VE LR+ +L+I A L GCTF L V H E A ++ W+LAD + + EP +L+P+K++ L + L E Sbjct: 1 MTTLTRQDLNFGQVVADILCEFLEVAVHLILYVREVYPTGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEKNDVEKVVVVILDKEHH----PVERFVFEIAQPPLLSISSDSL-LSHVEQLLRAFILKISVCDAVLDNNPPGCTFTLLV--HTREAATRNMEKI-------QVIKDFPWILADEQDVHM-QEP---RLIPLKTMTSDILKMQLYVE 204
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A2R6XC44_MARPO (HORMA domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XC44_MARPO) HSP 1 Score: 102 bits (253), Expect = 4.340e-23 Identity = 71/208 (34.13%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 40 IVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHL-PTRQGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660 + D+L EF+E AV LL R+LYP +IFERRR VPV RH EL +IH L S ++ G+V KV V FF + +Q PVER F + V ++ S + + D+E LR+ L+++ S L P Q CTF + + P ++ +G W+ AD+ EP + + PIKS+ L ++L E Sbjct: 15 VTDLLCEFLEVAVTLLLSIRKLYPAEIFERRRHLNVPVQWIRHAELRDHIHSALTSLHSWIQQGIVEKVAVVFFDS----NQTPVERFVFKLNVNQNFAAS---LPVNDIEYSLRTFLIKLSVSEPLLRPLPQDCTFEIIAYSK--------------LLPGDASDKGRLWISADSKQW---QEPAE--ITPIKSMTSDALDVELYVE 196
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A6P7WUC6_9AMPH (mitotic spindle assembly checkpoint protein MAD2B isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7WUC6_9AMPH) HSP 1 Score: 100 bits (250), Expect = 1.150e-22 Identity = 76/222 (34.23%), Postives = 109/222 (49.10%), Query Frame = 1 Query: 1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660 M + RQ + + D+L EF+E AVH +L+ R +YP IF++R+KY VPV MS HPELN YI L K L+E V KV+V H PVER F + S D + L VE LR+ +L+I A L GCTF + V E A R+ + ++ W++AD + + EP +L+P+K++ L + L E Sbjct: 1 MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEKNDVEKVVVMILDKEHH----PVERFVFEITQPPLLSVSSDSL-LSHVEQLLRALILKISVCDAVLDNNPPGCTFTILVHTREA----AARNME-----KIQVIKDFPWIVADEQDMHM-HEP---RLIPLKTMTSDILKMQLYVE 204
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A1S3JBA3_LINUN (mitotic spindle assembly checkpoint protein MAD2B n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JBA3_LINUN) HSP 1 Score: 100 bits (248), Expect = 2.060e-22 Identity = 67/217 (30.88%), Postives = 114/217 (52.53%), Query Frame = 1 Query: 13 HRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTR-QGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660 H+ + DIL EF+E A H +L+ R++YPP +FERR+KY +PV +SRHPE+ SYI +V+ + L+++ + KV++ E PVER F + + S D L+ +E LRS +L++ A L + + CT+ V+ H +E A D + P+ + W+ A++ + +LVP+K+++ + + L AE Sbjct: 3 HQDFSVSEVSADILCEFLEVAFHCILYVRQVYPPGVFERRKKYNIPVQVSRHPEVRSYIQEVVKSLRPLLQNNELEKVVLVILDGFER----PVERFVFEITTPQQPNISDDSFLLR-IEQALRSFILKLNICEALLSDKPKDCTWT--VQVHTKESAV----DTLQSQPL---IESFPWVQAED----LQTSMADSRLVPLKAMQTGLVQMQLYAE 201
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A8C8DAH2_ONCTS (Mitotic arrest deficient 2 like 2 n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8DAH2_ONCTS) HSP 1 Score: 99.8 bits (247), Expect = 2.120e-22 Identity = 63/159 (39.62%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHE 471 M + RQ + + DIL EF+E A+H +L+ R +YP IF++R+KY VPV MS HPELN YIH L K L+E KV+V H PVER F + S D + L VE LR+ +L+I A L GCTF + V E Sbjct: 1 MTTLTRQDLNFGQVVADILCEFLEVAIHLILYVREVYPSGIFQKRKKYNVPVQMSCHPELNQYIHDTLHCVKPLIEKNDAEKVVVVIMDKEHH----PVERFVFEISQPPLLSISSDTL-LSHVEQLLRAVILKISVCDAVLENNPPGCTFTVLVHTRE 154
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A8J4WQ68_CLAMG (Mitotic spindle assembly checkpoint protein MAD2B n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4WQ68_CLAMG) HSP 1 Score: 102 bits (253), Expect = 2.650e-22 Identity = 75/223 (33.63%), Postives = 112/223 (50.22%), Query Frame = 1 Query: 1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAEM 663 M + RQ + + DIL EF+E A+H +L+ R +YP IF++R+KY VPV MS HPELN YI L K L+E KV+V H PVER F + S D + L VE LR+ +L+I A L + GCTF + V E A R+ + ++ W++AD + ++ EP +L+P+K++ + + LS +M Sbjct: 1 MATLTRQDLNFGQVVADILCEFLEVAIHLILYVREVYPSGIFQKRKKYNVPVQMSCHPELNQYIQDTLQCVKPLIEKNEAEKVVVVIMDKEHH----PVERFVFEISQPPLLSISSDSL-LSHVEQLLRAVILKISVCDAVLDSNPPGCTFTVLVYTRES----ATRNME-----KVQVIKDFPWIVADEQEV-LMQEP---RLIPLKTMTSDIVKVYLSTQM 205 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig583.14272.1 >prot_L-elsbetiae_contig583.14272.1 ID=prot_L-elsbetiae_contig583.14272.1|Name=mRNA_L-elsbetiae_contig583.14272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp MDAVHRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPback to top mRNA from alignment at L-elsbetiae_contig583:14027..16354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig583.14272.1 ID=mRNA_L-elsbetiae_contig583.14272.1|Name=mRNA_L-elsbetiae_contig583.14272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2328bp|location=Sequence derived from alignment at L-elsbetiae_contig583:14027..16354+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig583:14027..16354+ >mRNA_L-elsbetiae_contig583.14272.1 ID=mRNA_L-elsbetiae_contig583.14272.1|Name=mRNA_L-elsbetiae_contig583.14272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1362bp|location=Sequence derived from alignment at L-elsbetiae_contig583:14027..16354+ (Laminarionema elsbetiae ELsaHSoW15)back to top |