mRNA_L-elsbetiae_contig583.14272.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig583.14272.1
Unique NamemRNA_L-elsbetiae_contig583.14272.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 2.190e-118
Identity = 174/228 (76.32%), Postives = 195/228 (85.53%), Query Frame = 1
Query:    1 MDAVHRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEEEGARAGRHDD----GGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAEMGDC 672
            MD V+ QQGW +A+VDILVEF+EAA HSLLH+RR YP DIFERRRKYGVPVWMSRHPELN+YI +VLLR K LME GVVR+VLVCFF   EHVDQAPVERVAF VRV+ DG  SVD  SLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHE+   + GRHD       +SPVRSA+RGGKW+LAD+ A GV+AEPG+R++VPIKSVRGRGL+L+LS EMGDC
Sbjct:    1 MDGVY-QQGWSEAVVDILVEFLEAATHSLLHSRRTYPQDIFERRRKYGVPVWMSRHPELNAYISEVLLRVKLLMEQGVVRRVLVCFFLEEEHVDQAPVERVAFDVRVDNDGDDSVDSTSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDC 227          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A835YLW3_9STRA (HORMA domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.380e-31
Identity = 75/198 (37.88%), Postives = 113/198 (57.07%), Query Frame = 1
Query:   46 DILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQ---DVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEP-GQRQLVPIKSVR 627
            D+L+EF+EAA+H+ LHAR      +FERRR Y VPVWMSRHPELN YI Q L  A+ L+   ++ +V +CF +    ++++      F   ++E       PI+L    ++E  LR+ L++I  S A LP+R+GCTF+L +          G    G A+   +A  G KWL++D         P G+ ++VP++SVR
Sbjct:   31 DVLLEFLEAAIHTTLHAR-----GMFERRRAYEVPVWMSRHPELNEYIAQALANARPLLVERLLHRVYLCFKRENGAIEES------FVFELQESDDAPAGPITLDAVTELEAHLRAVLVKINMSGAALPSREGCTFSLLI----------GCAGAGAATARAAAAAGDKWLVSDAQD----GRPAGELRVVPVRSVR 203          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: UPI000624F878 (mitotic spindle assembly checkpoint protein MAD2B isoform X1 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI000624F878)

HSP 1 Score: 104 bits (260), Expect = 3.330e-24
Identity = 66/207 (31.88%), Postives = 107/207 (51.69%), Query Frame = 1
Query:   46 DILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEH--GVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHL-PTRQGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSA 657
            DIL+EF+E A H +L  R LYP +IF R++ YG+ V +S HPELNSYI +VL   + L+ H    +RK+++CF+K     DQ PVE+  F +          DP  L+  E+ LR+  L++  S ++L P  Q  TF++ +  HE        +      P         W+  + + + +     ++ L+P+K++    L L + A
Sbjct:   10 DILLEFLEVAFHQILFVRNLYPKEIFVRKQIYGIGVQISEHPELNSYIKEVLNSIRELIRHEENCIRKIVLCFYKE----DQTPVEQFVFDLSNLRANLAVKDPFFLK-TEESLRTLCLKLSTSGSYLKPLPQNTTFSIQIHTHEAAHVSLSENPKCDNFP---------WIEVEGETVSI----KEQTLLPLKTINTEYLKLQMYA 198          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A6P4YFT9_BRABE (mitotic spindle assembly checkpoint protein MAD2B-like n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YFT9_BRABE)

HSP 1 Score: 103 bits (256), Expect = 1.530e-23
Identity = 68/222 (30.63%), Postives = 113/222 (50.90%), Query Frame = 1
Query:    7 AVHRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTR-QGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAEMGD 669
            ++H+         DI+ EF+E A H +L+ R++YPP IF+RR+KY +PV MS HP++N Y+   L   + L+E G V KV++       +    P+ER  F V        + D   L+ +E  LR+ +L+I    + L T  Q  TF++HV   +   A         +   +  V+   W+ AD+D+L +   P  R ++P+K++    + + L  E GD
Sbjct:    5 SIHQDINVAQIAADIVCEFLEVAFHQILYIRQVYPPGIFQRRKKYNIPVQMSCHPDVNQYLQDTLQTIRPLVEKGEVEKVVL----NVTNCQARPLERFVFEVTPPVQPSVNDDSYLLR-LEQALRAFVLKINVCDSMLDTLPQDVTFSIHVYTQDSAAA---------SLEQQQLVQNFPWVEADSDSLRM---PNAR-IIPLKTMTSNVIKMQLYVEEGD 208          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: MD2L2_XENLA (Mitotic spindle assembly checkpoint protein MAD2B n=12 Tax=Tetrapoda TaxID=32523 RepID=MD2L2_XENLA)

HSP 1 Score: 102 bits (255), Expect = 2.100e-23
Identity = 79/222 (35.59%), Postives = 107/222 (48.20%), Query Frame = 1
Query:    1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660
            M  + RQ   +   + DIL EF+E AVH +L+ R +YP  IF++R+KY VPV MS HPELN YI   L   K L+E   V KV+V       H    PVER  F +        S D + L  VE  LR+ +L+I    A L     GCTF L V  H  E A                ++   W+LAD   + +  EP   +L+P+K++    L + L  E
Sbjct:    1 MTTLTRQDLNFGQVVADILCEFLEVAVHLILYVREVYPTGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEKNDVEKVVVVILDKEHH----PVERFVFEIAQPPLLSISSDSL-LSHVEQLLRAFILKISVCDAVLDNNPPGCTFTLLV--HTREAATRNMEKI-------QVIKDFPWILADEQDVHM-QEP---RLIPLKTMTSDILKMQLYVE 204          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A2R6XC44_MARPO (HORMA domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XC44_MARPO)

HSP 1 Score: 102 bits (253), Expect = 4.340e-23
Identity = 71/208 (34.13%), Postives = 104/208 (50.00%), Query Frame = 1
Query:   40 IVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHL-PTRQGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660
            + D+L EF+E AV  LL  R+LYP +IFERRR   VPV   RH EL  +IH  L    S ++ G+V KV V FF +    +Q PVER  F + V ++   S   + + D+E  LR+ L+++  S   L P  Q CTF +   +                 P  ++ +G  W+ AD+       EP +  + PIKS+    L ++L  E
Sbjct:   15 VTDLLCEFLEVAVTLLLSIRKLYPAEIFERRRHLNVPVQWIRHAELRDHIHSALTSLHSWIQQGIVEKVAVVFFDS----NQTPVERFVFKLNVNQNFAAS---LPVNDIEYSLRTFLIKLSVSEPLLRPLPQDCTFEIIAYSK--------------LLPGDASDKGRLWISADSKQW---QEPAE--ITPIKSMTSDALDVELYVE 196          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A6P7WUC6_9AMPH (mitotic spindle assembly checkpoint protein MAD2B isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7WUC6_9AMPH)

HSP 1 Score: 100 bits (250), Expect = 1.150e-22
Identity = 76/222 (34.23%), Postives = 109/222 (49.10%), Query Frame = 1
Query:    1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660
            M  + RQ   +   + D+L EF+E AVH +L+ R +YP  IF++R+KY VPV MS HPELN YI   L   K L+E   V KV+V       H    PVER  F +        S D + L  VE  LR+ +L+I    A L     GCTF + V   E     A R+ +         ++   W++AD   + +  EP   +L+P+K++    L + L  E
Sbjct:    1 MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEKNDVEKVVVMILDKEHH----PVERFVFEITQPPLLSVSSDSL-LSHVEQLLRALILKISVCDAVLDNNPPGCTFTILVHTREA----AARNME-----KIQVIKDFPWIVADEQDMHM-HEP---RLIPLKTMTSDILKMQLYVE 204          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A1S3JBA3_LINUN (mitotic spindle assembly checkpoint protein MAD2B n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JBA3_LINUN)

HSP 1 Score: 100 bits (248), Expect = 2.060e-22
Identity = 67/217 (30.88%), Postives = 114/217 (52.53%), Query Frame = 1
Query:   13 HRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTR-QGCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAE 660
            H+     +   DIL EF+E A H +L+ R++YPP +FERR+KY +PV +SRHPE+ SYI +V+   + L+++  + KV++      E     PVER  F +   +    S D   L+ +E  LRS +L++    A L  + + CT+   V+ H +E A     D   + P+   +    W+ A++    +       +LVP+K+++   + + L AE
Sbjct:    3 HQDFSVSEVSADILCEFLEVAFHCILYVRQVYPPGVFERRKKYNIPVQVSRHPEVRSYIQEVVKSLRPLLQNNELEKVVLVILDGFER----PVERFVFEITTPQQPNISDDSFLLR-IEQALRSFILKLNICEALLSDKPKDCTWT--VQVHTKESAV----DTLQSQPL---IESFPWVQAED----LQTSMADSRLVPLKAMQTGLVQMQLYAE 201          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A8C8DAH2_ONCTS (Mitotic arrest deficient 2 like 2 n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8DAH2_ONCTS)

HSP 1 Score: 99.8 bits (247), Expect = 2.120e-22
Identity = 63/159 (39.62%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHE 471
            M  + RQ   +   + DIL EF+E A+H +L+ R +YP  IF++R+KY VPV MS HPELN YIH  L   K L+E     KV+V       H    PVER  F +        S D + L  VE  LR+ +L+I    A L     GCTF + V   E
Sbjct:    1 MTTLTRQDLNFGQVVADILCEFLEVAIHLILYVREVYPSGIFQKRKKYNVPVQMSCHPELNQYIHDTLHCVKPLIEKNDAEKVVVVIMDKEHH----PVERFVFEISQPPLLSISSDTL-LSHVEQLLRAVILKISVCDAVLENNPPGCTFTVLVHTRE 154          
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Match: A0A8J4WQ68_CLAMG (Mitotic spindle assembly checkpoint protein MAD2B n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4WQ68_CLAMG)

HSP 1 Score: 102 bits (253), Expect = 2.650e-22
Identity = 75/223 (33.63%), Postives = 112/223 (50.22%), Query Frame = 1
Query:    1 MDAVHRQQ-GWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVPVWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVERVAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQ-GCTFALHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQRQLVPIKSVRGRGLTLDLSAEM 663
            M  + RQ   +   + DIL EF+E A+H +L+ R +YP  IF++R+KY VPV MS HPELN YI   L   K L+E     KV+V       H    PVER  F +        S D + L  VE  LR+ +L+I    A L +   GCTF + V   E     A R+ +         ++   W++AD   + ++ EP   +L+P+K++    + + LS +M
Sbjct:    1 MATLTRQDLNFGQVVADILCEFLEVAIHLILYVREVYPSGIFQKRKKYNVPVQMSCHPELNQYIQDTLQCVKPLIEKNEAEKVVVVIMDKEHH----PVERFVFEISQPPLLSISSDSL-LSHVEQLLRAVILKISVCDAVLDSNPPGCTFTVLVYTRES----ATRNME-----KVQVIKDFPWIVADEQEV-LMQEP---RLIPLKTMTSDIVKVYLSTQM 205          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig583.14272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLX5_9PHAE2.190e-11876.32HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YLW3_9STRA1.380e-3137.88HORMA domain protein n=1 Tax=Tribonema minus TaxID... [more]
UPI000624F8783.330e-2431.88mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A6P4YFT9_BRABE1.530e-2330.63mitotic spindle assembly checkpoint protein MAD2B-... [more]
MD2L2_XENLA2.100e-2335.59Mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A2R6XC44_MARPO4.340e-2334.13HORMA domain-containing protein n=1 Tax=Marchantia... [more]
A0A6P7WUC6_9AMPH1.150e-2234.23mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A1S3JBA3_LINUN2.060e-2230.88mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A8C8DAH2_ONCTS2.120e-2239.62Mitotic arrest deficient 2 like 2 n=1 Tax=Oncorhyn... [more]
A0A8J4WQ68_CLAMG2.650e-2233.63Mitotic spindle assembly checkpoint protein MAD2B ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig583contigL-elsbetiae_contig583:14027..16354 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.8
Seed ortholog evalue3.8e-93
Seed eggNOG ortholog2880.D7FJL0
Preferred nameMAD2L2
KEGG koko:K02537,ko:K03508,ko:K13728
KEGG Pathwayko01100,ko03460,ko04110,ko04111,ko04113,ko04114,ko04914,ko05100,ko05131,ko05166,map01100,map03460,map04110,map04111,map04113,map04114,map04914,map05100,map05131,map05166
KEGG ModuleM00293
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0000018,GO:0000075,GO:0000122,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000731,GO:0001085,GO:0001102,GO:0001558,GO:0001932,GO:0001934,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006310,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007154,GO:0007162,GO:0007165,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0008432,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009968,GO:0009987,GO:0010224,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010569,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010648,GO:0010717,GO:0010719,GO:0010944,GO:0010948,GO:0010965,GO:0015630,GO:0016035,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0017125,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019900,GO:0019901,GO:0019985,GO:0022402,GO:0022407,GO:0022408,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030071,GO:0030111,GO:0030155,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031577,GO:0031974,GO:0031981,GO:0032042,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033135,GO:0033138,GO:0033554,GO:0033613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035861,GO:0040008,GO:0042176,GO:0042177,GO:0042276,GO:0042325,GO:0042327,GO:0042575,GO:0042770,GO:0042772,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043433,GO:0043504,GO:0043596,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045191,GO:0045595,GO:0045596,GO:0045738,GO:0045739,GO:0045786,GO:0045830,GO:0045839,GO:0045841,GO:0045892,GO:0045893,GO:0045910,GO:0045911,GO:0045930,GO:0045934,GO:0045935,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051093,GO:0051094,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051339,GO:0051348,GO:0051349,GO:0051438,GO:0051444,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0060828,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0070987,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0080134,GO:0080135,GO:0090090,GO:0090304,GO:0090734,GO:0097435,GO:1901360,GO:1901362,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902494,GO:1902679,GO:1902680,GO:1903047,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1904666,GO:1904667,GO:1905818,GO:1905819,GO:1990234,GO:2000026,GO:2000042,GO:2000047,GO:2000048,GO:2000112,GO:2000113,GO:2000677,GO:2000678,GO:2000779,GO:2000780,GO:2000781,GO:2000816,GO:2001020,GO:2001021,GO:2001022,GO:2001032,GO:2001034,GO:2001141,GO:2001251
EggNOG free text desc.negative regulation of ubiquitin protein ligase activity
EggNOG OGsKOG3186@1,KOG3186@2759
EC2.7.7.7
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko03400
Ec32 ortholog descriptionHORMA domain protein
Ec32 orthologEc-04_006500.1
Exons5
Model size681
Cds size681
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig583.14272.1prot_L-elsbetiae_contig583.14272.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig583 14027..16354 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816627.6958516-CDS-L-elsbetiae_contig583:14026..141411622816627.6958516-CDS-L-elsbetiae_contig583:14026..14141Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 14027..14141 +
1691683695.9184096-CDS-L-elsbetiae_contig583:14026..141411691683695.9184096-CDS-L-elsbetiae_contig583:14026..14141Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 14027..14141 +
1622816627.707893-CDS-L-elsbetiae_contig583:14809..148891622816627.707893-CDS-L-elsbetiae_contig583:14809..14889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 14810..14889 +
1691683695.929664-CDS-L-elsbetiae_contig583:14809..148891691683695.929664-CDS-L-elsbetiae_contig583:14809..14889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 14810..14889 +
1622816627.718153-CDS-L-elsbetiae_contig583:15106..152741622816627.718153-CDS-L-elsbetiae_contig583:15106..15274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 15107..15274 +
1691683695.9384482-CDS-L-elsbetiae_contig583:15106..152741691683695.9384482-CDS-L-elsbetiae_contig583:15106..15274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 15107..15274 +
1622816627.7287333-CDS-L-elsbetiae_contig583:15655..157931622816627.7287333-CDS-L-elsbetiae_contig583:15655..15793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 15656..15793 +
1691683695.9469244-CDS-L-elsbetiae_contig583:15655..157931691683695.9469244-CDS-L-elsbetiae_contig583:15655..15793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 15656..15793 +
1622816627.7387993-CDS-L-elsbetiae_contig583:16174..163541622816627.7387993-CDS-L-elsbetiae_contig583:16174..16354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 16175..16354 +
1691683695.9560962-CDS-L-elsbetiae_contig583:16174..163541691683695.9560962-CDS-L-elsbetiae_contig583:16174..16354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig583 16175..16354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig583.14272.1

>prot_L-elsbetiae_contig583.14272.1 ID=prot_L-elsbetiae_contig583.14272.1|Name=mRNA_L-elsbetiae_contig583.14272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MDAVHRQQGWDDAIVDILVEFIEAAVHSLLHARRLYPPDIFERRRKYGVP
VWMSRHPELNSYIHQVLLRAKSLMEHGVVRKVLVCFFKAAEHVDQAPVER
VAFAVRVEEDGGGSVDPISLQDVEDQLRSALLQIQKSSAHLPTRQGCTFA
LHVEAHEEEGARAGRHDDGGASPVRSAVRGGKWLLADNDALGVIAEPGQR
QLVPIKSVRGRGLTLDLSAEMGDCPT*
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mRNA from alignment at L-elsbetiae_contig583:14027..16354+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig583.14272.1 ID=mRNA_L-elsbetiae_contig583.14272.1|Name=mRNA_L-elsbetiae_contig583.14272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2328bp|location=Sequence derived from alignment at L-elsbetiae_contig583:14027..16354+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGCCGTCCATCGACAGCAGGGCTGGGATGACGCCATAGTCGACAT TTTGGTGGAGTTTATCGAAGCGGCTGTTCACAGCTTACTCCACGCGCGAC GTCTGTATCCGCCAGGTTTGAAAAATGGAGAATCCGTACATCAGCTGCCC TAGTCTCCCTCTCTCTCTCCATCCGTCCTTGTGTGTACAACCCATTGGAA CCCCCTGGAATTTTCCGGCCCTCCATGCGATATACATGCTTATTTGTTGT GCTTCTGCTGCAGCCGCTTTTGGTCGTAAGATTCCCATCATGTGTAATAA TGTGTAAGGGGAACCAGACCTCAGTTCAGCAGAGCAGAGGGAGGGGGAGG TGTGCTGAATTCATCAACTCGAATTCATGAACGACAGTATTCACGAGGTC GGACTGGTGGGTACAAGAGCTCCCTATGTTGCCGGGCCTCAGGAATATGC GGTTAGTTCAGCTACTGCACATCAACCCCTTTTCGCGTCCGAAACGTGCT CTTCGCACACGCAGTTTCGCGAAAATTCCCGCCGTCTGCACCTAGATCTA CACTCTCTGTTGTGTGTGTGTGTGTCCTTCCCATTTACTTCGGCGAAAGT CCCCCCAAGTCGAGACGTGTACTACACCTTGTGGTGTACTTAGAGGTACT ACACTTTGCAGTGCATTTGCCTGTACAACTAGAACCAACCAGGGTCACAC AGGAGGGAGTTAATTAACACTGGGGCTTTTTCTTCTGTCTACTGCTGTGT ATCATTGCCTGTTTCCGTTCCCAACCTCTCAAGATATCTTCGAACGGCGG CGAAAGTATGGCGTGCCAGTGTGGATGAGCCGGCATCCCGAACTGAACAG CTACATACACCAAGTGAGCATGACACTAAATGTGTACCACACCCACATTT TGACGCACAATCTCGCCATCCCAACACGAAAAAAGCAACCCGCATCAGAC AGCAGTAGTACCGACAAACGGACGCGGACGCATTTCCCTCCAGGGGAGCT CTTCACGGAGATAACAGGCGTCGCCGCCGATTGTCTGTGTGCAACTCGAT GCTCTTTTCCATCTCTCTTCGCTGGAATAGGTCTTGCTTCGAGCGAAGTC GCTCATGGAACACGGTGTGGTGCGCAAAGTTCTCGTTTGCTTCTTCAAGG CGGCCGAACATGTGGACCAGGCGCCGGTAGAGAGAGTCGCATTCGCCGTT CGGGTCGAAGAAGACGGTGGCGGCTCCGTGGACCCGATAAGTCTACAGGT GTGCGTTGCGTAGCCTCGTTGTTTTTTTGTGTGTGCTCCTCTGTATGTAT GCCGTTGCTTAATTGAAATCCAACCCTGAAGGGCGCTCAATAGCGTAGAT GGTTGTGCTTCTTCTGCTGTGGCCTTTTCCAGGGTTGCCTTTTACACAAA GCAACGGCCGTAACCCACGGAGTATATGAGCGCTTGGTGCTCTAACCGTC TAGCAGGTGTCCAGTCAGTTAAGTGGTTTCGAATATATTTAGCTTTCCCC GACACTGCGGTGTATCTATCTACTCCGAAGAGTGTTTTTTTTTGTGTGCG CCCCATTATCCACCGGAGCCGCCCACAACCACGACAACATGCCCATCGGT CGCCGCGATGTCGTCAAATGGCGACCCAGGACGTGGAAGACCAGCTCCGG TCTGCCCTGCTCCAGATTCAGAAGTCATCGGCGCACCTGCCCACGCGCCA AGGCTGCACGTTCGCGCTGCATGTCGAAGCCCACGAGGAAGAGGGAGCCC GAGCCGGAAGACACGATGTGAGCTGGATAAATACACAGAAGTATCTAAGG ATGCCCCAAGTCAGACGCGCTACTGCCGTGCACCAGCGCATTCTTGCTGG TGCGGAGGGCTTTCGTTTCTTGCTGCCGATTAGGATCGCACCGGGTGTTT TTTCACTGTTTTCGTGTTTTGATTTCGAGGGTTATCTTCTCTGCACGAAA TTGAAAGCCCGCAGGCTGAAGGGGTAACTACATGAGACCAAGACGCTGTC GAGCGAACCGGGCCGGGCCCTCCGTCCGTCCAGTTTATTTGGAACGATGA TGATGTAATCTGCGCCGAGGCCGCTCGTTATTTTGTCCCGGCCTCGTTGT TTTCCGACGCTCGATATCACTTATTTTTCTTCCCCATCTTGATTCTAGGA TGGCGGGGCTTCGCCGGTAAGATCAGCAGTGAGGGGGGGCAAGTGGCTGC TGGCGGACAATGATGCCCTGGGAGTGATCGCGGAGCCGGGGCAGCGGCAG CTGGTGCCCATAAAGTCCGTGCGGGGTCGGGGCCTGACCCTCGATTTGTC GGCGGAGATGGGAGACTGCCCAACATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig583:14027..16354+

>mRNA_L-elsbetiae_contig583.14272.1 ID=mRNA_L-elsbetiae_contig583.14272.1|Name=mRNA_L-elsbetiae_contig583.14272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1362bp|location=Sequence derived from alignment at L-elsbetiae_contig583:14027..16354+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGCCGTCCATCGACAGCAGGGCTGGGATGACGCCATAGTCGACAT
TTTGGTGGAGTTTATCGAAGCGGCTGTTCACAGCTTACTCCACGCGCGAC
GTCTGTATCCGCCAGATGGACGCCGTCCATCGACAGCAGGGCTGGGATGA
CGCCATAGTCGACATTTTGGTGGAGTTTATCGAAGCGGCTGTTCACAGCT
TACTCCACGCGCGACGTCTGTATCCGCCAGATATCTTCGAACGGCGGCGA
AAGTATGGCGTGCCAGTGTGGATGAGCCGGCATCCCGAACTGAACAGCTA
CATACACCAAATATCTTCGAACGGCGGCGAAAGTATGGCGTGCCAGTGTG
GATGAGCCGGCATCCCGAACTGAACAGCTACATACACCAAGTCTTGCTTC
GAGCGAAGTCGCTCATGGAACACGGTGTGGTGCGCAAAGTTCTCGTTTGC
TTCTTCAAGGCGGCCGAACATGTGGACCAGGCGCCGGTAGAGAGAGTCGC
ATTCGCCGTTCGGGTCGAAGAAGACGGTGGCGGCTCCGTGGACCCGATAA
GTCTACAGGTCTTGCTTCGAGCGAAGTCGCTCATGGAACACGGTGTGGTG
CGCAAAGTTCTCGTTTGCTTCTTCAAGGCGGCCGAACATGTGGACCAGGC
GCCGGTAGAGAGAGTCGCATTCGCCGTTCGGGTCGAAGAAGACGGTGGCG
GCTCCGTGGACCCGATAAGTCTACAGGACGTGGAAGACCAGCTCCGGTCT
GCCCTGCTCCAGATTCAGAAGTCATCGGCGCACCTGCCCACGCGCCAAGG
CTGCACGTTCGCGCTGCATGTCGAAGCCCACGAGGAAGAGGGAGCCCGAG
CCGGAAGACACGATGACGTGGAAGACCAGCTCCGGTCTGCCCTGCTCCAG
ATTCAGAAGTCATCGGCGCACCTGCCCACGCGCCAAGGCTGCACGTTCGC
GCTGCATGTCGAAGCCCACGAGGAAGAGGGAGCCCGAGCCGGAAGACACG
ATGATGGCGGGGCTTCGCCGGTAAGATCAGCAGTGAGGGGGGGCAAGTGG
CTGCTGGCGGACAATGATGCCCTGGGAGTGATCGCGGAGCCGGGGCAGCG
GCAGCTGGTGCCCATAAAGTCCGTGCGGGGTCGGGGCCTGACCCTCGATT
TGTCGGCGGAGATGGGAGACTGCCCAACATAAGATGGCGGGGCTTCGCCG
GTAAGATCAGCAGTGAGGGGGGGCAAGTGGCTGCTGGCGGACAATGATGC
CCTGGGAGTGATCGCGGAGCCGGGGCAGCGGCAGCTGGTGCCCATAAAGT
CCGTGCGGGGTCGGGGCCTGACCCTCGATTTGTCGGCGGAGATGGGAGAC
TGCCCAACATAA
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