mRNA_L-elsbetiae_contig5820.14259.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A6H5JIA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA6_9PHAE) HSP 1 Score: 214 bits (545), Expect = 2.120e-64 Identity = 151/260 (58.08%), Postives = 174/260 (66.92%), Query Frame = 1 Query: 40 MLLCARRFSNKVLLSLMALAYPRLQCIS----TTQAFL---VSNTARVAAAPRAQGKSIMVKHSAITPP--SRRASSGSLCSTGRSSLLLLPSTGPRRLPRPRVPHVLVSSSSSTSVPEPASGAPSAAPADVDQKSSQAAESGGGQGFGAKPVGKPDKQXXXXXXXXXRPKSSRPTQPKAPPRGNNLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMSARK 792 ML+ RRF LLSLM+ A C+ + QAFL +++TAR + R IM K T SRR S + S+GRSS LL S RPRVPH+L S++SS+ PA+G +A DQ QA +G G+GFG+KP G+ + XXXXXXXXX QPKAPPRG+NLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSV VK KSVGILRPITYMNNSG+SARK Sbjct: 1 MLMHTRRFWRNSLLSLMSSA-----CLMRPPPSAQAFLLTSIASTARTSTTARLANAIIMGKQQVATTTISSRRVCSKAPRSSGRSSNPLLSSM------RPRVPHLLDSAASSSLAASPATGDTAAPAPKADQNPPQAGATGEGRGFGSKPAGQQSQXXXXXXXXXXXXXXXXXPQPKAPPRGDNLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVKHKSVGILRPITYMNNSGISARK 249
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: D8LSW9_ECTSI (Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW9_ECTSI) HSP 1 Score: 117 bits (293), Expect = 5.300e-29 Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 1 Query: 613 MTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMSARK 792 MTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSV V KSVGILRPITYMNNSGMSARK Sbjct: 1 MTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVNDKSVGILRPITYMNNSGMSARK 60
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A4D9CWV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV7_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.520e-23 Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 556 PRGNNLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMSARK 792 PR NLL+VGLGNPG +Y MTRHNAGFL + LARR G ++++AFQGEY V KGKSVG+L+P T+MN SG S RK Sbjct: 742 PRSKNLLIVGLGNPGKEYAMTRHNAGFLAVDLLARRLGADFRLRSAFQGEYGCVAYKGKSVGLLKPTTFMNRSGQSLRK 820
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: UPI0003B43DCA (aminoacyl-tRNA hydrolase n=1 Tax=Leucothrix mucor TaxID=45248 RepID=UPI0003B43DCA) HSP 1 Score: 94.4 bits (233), Expect = 5.540e-20 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 574 LVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMSARK 792 L+ GLGNPG KY TRHNAGF +ELARR+GGT K ++ F GE C V + G V +L+P T+MN SG+SA++ Sbjct: 8 LITGLGNPGMKYDKTRHNAGFWFVDELARRYGGTFKTESRFSGECCKVDIAGMPVWLLKPTTFMNRSGLSAKQ 80
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A3E0X319_9GAMM (Peptidyl-tRNA hydrolase n=1 Tax=Alkalilimnicola ehrlichii TaxID=351052 RepID=A0A3E0X319_9GAMM) HSP 1 Score: 90.5 bits (223), Expect = 1.720e-18 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 574 LVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMS 783 L+VGLGNPGD+Y TRHNAGF EELARR+GG+ + + FQGE + V G+ +L+P+T+MN SG S Sbjct: 9 LIVGLGNPGDRYTQTRHNAGFWFVEELARRYGGSFRSEAKFQGETARIVVGGQDCHLLKPMTFMNRSGAS 78
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A433I5I9_9GAMM (Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433I5I9_9GAMM) HSP 1 Score: 90.1 bits (222), Expect = 3.190e-18 Identity = 38/71 (53.52%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 574 LVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMSA 786 LVVGLGNPG +Y TRHNAGF + +ELAR+ GG + ++ FQGE C +T+ G+ + +L+P+T+MN SG +A Sbjct: 9 LVVGLGNPGPEYAQTRHNAGFWLVDELARQQGGRFRPESKFQGETCRITLAGRDLWLLKPMTFMNRSGHAA 79
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A1A6C0D8_9GAMM (Peptidyl-tRNA hydrolase n=1 Tax=Acidihalobacter prosperus TaxID=160660 RepID=A0A1A6C0D8_9GAMM) HSP 1 Score: 89.4 bits (220), Expect = 4.180e-18 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 574 LVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMS 783 L+VGLGNPG +Y TRHNAGF +ELARRHG TL+ +T F GE ++G+ V +L+P T+MN SG S Sbjct: 7 LIVGLGNPGPQYDRTRHNAGFWFLDELARRHGATLRAETRFSGEVGRARIEGREVWLLKPTTFMNRSGQS 76
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A432F7D7_9AQUI (Peptidyl-tRNA hydrolase n=1 Tax=Aquificaceae bacterium TaxID=2053503 RepID=A0A432F7D7_9AQUI) HSP 1 Score: 89.4 bits (220), Expect = 4.570e-18 Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 574 LVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMSARK 792 L+VGLGNPG+KY+ TRHNAGF +ELARR+ T K+++ F G ++G +V +L+P T+MN SG++AR+ Sbjct: 8 LIVGLGNPGNKYEKTRHNAGFWFVDELARRYSATFKLESRFSGAVSKANIEGHTVWLLKPTTFMNKSGLAARQ 80
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A7W0Z0H1_9ACTN (Peptidyl-tRNA hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0Z0H1_9ACTN) HSP 1 Score: 88.2 bits (217), Expect = 9.900e-18 Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 1 Query: 571 LLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMS 783 LLV GLGNPG +Y TRHN G+LVA+ELARRHGG+ + K F G V V G+ V +L+P TYMN SG S Sbjct: 3 LLVAGLGNPGAQYARTRHNVGWLVADELARRHGGSFRSK--FAGSLAQVRVDGRPVALLKPTTYMNESGRS 71
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Match: A0A1D8KAQ1_9GAMM (Peptidyl-tRNA hydrolase n=1 Tax=Acidihalobacter aeolianus TaxID=2792603 RepID=A0A1D8KAQ1_9GAMM) HSP 1 Score: 88.2 bits (217), Expect = 1.130e-17 Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 574 LVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVTVKGKSVGILRPITYMNNSGMS 783 L+VGLGNPG+KY TRHNAGF +E+ RRHGG+L+ ++ F GE ++ G+ + +L+P T+MN SG S Sbjct: 7 LIVGLGNPGEKYDQTRHNAGFWFVDEVLRRHGGSLRAESRFSGEVGRTSIDGQDIWLLKPTTFMNRSGQS 76 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5820.14259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5820.14259.1 >prot_L-elsbetiae_contig5820.14259.1 ID=prot_L-elsbetiae_contig5820.14259.1|Name=mRNA_L-elsbetiae_contig5820.14259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp GHRGVGTGEKAKNMLLCARRFSNKVLLSLMALAYPRLQCISTTQAFLVSNback to top mRNA from alignment at L-elsbetiae_contig5820:518..2525- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5820.14259.1 ID=mRNA_L-elsbetiae_contig5820.14259.1|Name=mRNA_L-elsbetiae_contig5820.14259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2008bp|location=Sequence derived from alignment at L-elsbetiae_contig5820:518..2525- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5820:518..2525- >mRNA_L-elsbetiae_contig5820.14259.1 ID=mRNA_L-elsbetiae_contig5820.14259.1|Name=mRNA_L-elsbetiae_contig5820.14259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1584bp|location=Sequence derived from alignment at L-elsbetiae_contig5820:518..2525- (Laminarionema elsbetiae ELsaHSoW15)back to top |