|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 328 |
| Cds size | 324 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816626.055058-CDS-L-elsbetiae_contig5818:2907..3020 | 1622816626.055058-CDS-L-elsbetiae_contig5818:2907..3020 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 2908..3020 + |
| 1691683694.6692674-CDS-L-elsbetiae_contig5818:2907..3020 | 1691683694.6692674-CDS-L-elsbetiae_contig5818:2907..3020 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 2908..3020 + |
| 1622816626.0684614-CDS-L-elsbetiae_contig5818:3242..3283 | 1622816626.0684614-CDS-L-elsbetiae_contig5818:3242..3283 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 3243..3283 + |
| 1691683694.6805828-CDS-L-elsbetiae_contig5818:3242..3283 | 1691683694.6805828-CDS-L-elsbetiae_contig5818:3242..3283 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 3243..3283 + |
| 1622816626.0805843-CDS-L-elsbetiae_contig5818:4146..4205 | 1622816626.0805843-CDS-L-elsbetiae_contig5818:4146..4205 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 4147..4205 + |
| 1691683694.6990643-CDS-L-elsbetiae_contig5818:4146..4205 | 1691683694.6990643-CDS-L-elsbetiae_contig5818:4146..4205 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 4147..4205 + |
| 1622816626.0919297-CDS-L-elsbetiae_contig5818:5776..5887 | 1622816626.0919297-CDS-L-elsbetiae_contig5818:5776..5887 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 5777..5887 + |
| 1691683694.71703-CDS-L-elsbetiae_contig5818:5776..5887 | 1691683694.71703-CDS-L-elsbetiae_contig5818:5776..5887 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5818 5777..5887 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5818.14254.1 >prot_L-elsbetiae_contig5818.14254.1 ID=prot_L-elsbetiae_contig5818.14254.1|Name=mRNA_L-elsbetiae_contig5818.14254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
AAVAQAVAVSAQKVEAAELAAAALEVKVHPSPVLGDHKWLQSAVGGMSRG
QDSGSSGGAIVDNGRATVAVKTAPGGDERDEEEQMMAEEEKPEAKNEETS
EEENEKEC back to topmRNA from alignment at L-elsbetiae_contig5818:2908..5889+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5818.14254.1 ID=mRNA_L-elsbetiae_contig5818.14254.1|Name=mRNA_L-elsbetiae_contig5818.14254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2982bp|location=Sequence derived from alignment at L-elsbetiae_contig5818:2908..5889+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGCAGTCGCTCAGGCGGTGGCGGTATCGGCCCAGAAGGTGGAAGCGGC
GGAACTTGCAGCAGCAGCCTTGGAAGTGAAGGTCCACCCATCGCCTGTGC
TGGGCGACCACAAGTACGAAATGGGTTTGGTCGACTGAATATTGATGGTG
GCTCAAAATGTTGTTTGGCCTCACCTTGCTAGGAGGGCTTTTGTTGTATG
TAGTTGTTCATTGAACGGCTACCCGTGTACAACTTCTGTCTTTGGACAAC
TACTGTGATTCTCCGTGAACCGCTGCTCCTGTCGTGTTCGTGTTTTAACC
ATGGACCGTTCTTTACGATGTTGTGATGCGTACAGGTGGTTGCAAAGCGC
CGTTGGCGGCATGAGCAGGGGACAAGGTGAGGCCGTATGTAGGGGTTACT
GGAAAGGGATACTAGAGGACGGAGGGCTTGCGGTGCAGAGAGAGAGAGGC
GGCAGATGTTGTTGTTTTCTTCACATTAAAAAACGTTATTATCTCTCTAT
CCAGTACCTCCGTACGTCCATACTATTCAAACACTCGACGCGGTCGATTC
CTGTAGTCACAGGCTAACTTACCCTAAGAAAGGGTATACTGAAGTTAGAA
GAGGGGGACCCGAAGGGTCAGCAAAGCAGAAAAACAAAAGATAAAACAGA
TAGTCTGGAGCCCTTCGCTCCCCTCTACATGCTTTGTGAGGTAAAAGCAA
AAACTGGAACATCCAACATCCTATCTTGGTACCCCAAAGCCAGGTTCTCG
CCGGTCAGGACGATTCGCCTAGTCCTCCCCATCTATTATACCTCATAGAT
TGTAAAGAGGGGGGAAGGAATCCGACTATATGTAAATCGGAAGTGCAAAC
AAACAAACAAACACACGAAAAAGAAACCACAGAAAGGATCAGTACCAAAC
ACTCCGGCGGTGATGCACGCTGGTACAGGGAGGGGGGTTAGTCAAGATAT
CAGTCCGCAACATAATGCGCTGCTGCCTCCGTCTCCGCCCTCTTGCATTG
GTCGCGTGCAGTTTCGATCGTCTTCGTCCCCGTTGATCTGTTGGCCGTAG
GTCCTTTATGTGCGTTTTAACAATGAAAATACGCTACAATTTTGCTGTAT
CGCCCGTACTCTTCGCATTTTGACGGTACCGTCTCTCTCGCCTAGGGCAG
TGCGCTCGCCAATCTTGGCGAACCTTCAACACCGCCCGGAACGATGCGCG
TGTGCCTATTTGTCCACCTTGTTGTCTTGGTGTGTGCAGACTCTGGATCA
TCTGGTGGTGCGATAGTCGACAATGGCCGCGCCACCGTGGCAGTCAAGGT
AAGAGCTTTCAATGGCGAAAATCTATTCGTTATTGTTTTTTTGTTGTCCA
AAATATCGAAGGCCTCACGCATCTCTCTACATAGAGACAGGGCGTTTACA
ACGATTTTTTTGTGTGAAGCGTCACCGTTGCCTGTTTGGTTCGTGCATCT
CAAACAATGCCAGCACTCTGGTACACGTTTCTCGGCGCAGAGGTGGTTTT
TTCGAAACCTAAGAAAAAACGACCAATGCCTTGTCTTGAGGCCGATCTCG
TGACGGAGAGTACTCTTTGTTTTCTTTCGTAAAGGTTTTTAGTCAGAACA
TCAAAACCGTACAATGTTTACTATTTGTTTTTTACCAAAATCTAGCCAAA
CGATTCAGAAATAAGCTGTGGCATTCGATCTTCAATTACATTGTAGGCGA
ACTTGTACTGTTTTATACGCGAAAATTGACCAAAGGATTCCGAAAGGGTT
GGAGGCGAATGATTCCTCCCTATCGATCCCCAGTTGCGTATTTGTGTTTG
TGTGCCATCTTGAGCTCTAGTTGTCGAAATATTCGTTTTTTTTCACAATA
GTTTCGGTTGTTTCTCTTTGTTTTCAGTCCTTTTTGTTTTCAGTGTGTCG
CTGCTCGAATGAGGAGTTGAAACTAGCATACTGCAATGACTCTTTTCCTC
GAGCCCATATTTTTCTCCTTGGTCTGAGCACCTCTAGGATGGCTGAAACT
CCGGCTAAATCGATGTGTCTTGGAAGGAACGCCAGGGAACGTGGTTTGGA
CAATATTTGGTGCACGGACCATGAGTTATCTTTCAGTGTAGGAATCTCCT
AGAAGCGCCCGAATGGCTCGCACAAGAGATAACATTTTCCCCGGAATTTA
CCCCGCCCCCTATCCTTCCAATTTTGTGCATTAGCCTTCCACTTTCTCTC
TCTCTGTTTTCTGGTGATCACCAGCCCCCCGCATCGCTCCACTTCGTCCA
ACGGGCTATACCACACACAGTTTTTATTTTATCGCTTCCCTGTCTCTATA
GCCTTCATCTCATCATCTCTACGACGACTCCGCTGCCCGAGTCCAAACGA
AAAGAGCGCGGCGCTTTCCCCCCCGATAATCGGAGTTTCTGACCACACTG
CTACTGTGCAGTCAACCATATTTTCACCAAATGTTGCTTTACTGCGTACT
GCTCCTGCAAAGAGATGTGTTTAGGCTCCTGCTGAAGGGTGATGTTCGGA
AGTGTGCAGCAGTATGCATGTTCAAAAAGGTCAACGGTCATCAGCGTGTT
TCCATTTGACATATCTACTCACGTTGACCGATTTTTCCGACAACAGCAGC
TCTCCACAGGAGGATAGACATTTTCGTTGCCTTGAAATTGCGTCCACTGA
AACGGAGGCACAACGCGCGCAAGACCTCGAGCATATATCGATTCTTCGAG
CTATTACACTGTTCTGTGGTGGTAACTCCGGTGCAATTCGAGTTCCGGAG
ATTCTACCTGTTGGGGGCGGGTGTCTTTAACCGTAGGTTAACACTCCCGT
TGTTCCCTCTTGATCGTCATCGTGCGTGTTGTCTTTGATGTACGATGCCT
GATCAATATTCTCCGACAGACGGCTCCTGGGGGGGATGAGAGAGATGAGG
AAGAACAAATGATGGCGGAGGAGGAGAAACCTGAGGCGAAGAACGAGGAA
ACCTCTGAAGAGGAAAACGAGAAAGAATGTGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5818:2908..5889+ >mRNA_L-elsbetiae_contig5818.14254.1 ID=mRNA_L-elsbetiae_contig5818.14254.1|Name=mRNA_L-elsbetiae_contig5818.14254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig5818:2908..5889+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGCAGTCGCTCAGGCGGTGGCGGTATCGGCCCAGAAGGTGGAAGCGGC
GGAACTTGCAGCAGCAGCCTTGGAAGTGAAGGTCCACCCATCGCCTGTGC
TGGGCGACCACAAGCAGCAGTCGCTCAGGCGGTGGCGGTATCGGCCCAGA
AGGTGGAAGCGGCGGAACTTGCAGCAGCAGCCTTGGAAGTGAAGGTCCAC
CCATCGCCTGTGCTGGGCGACCACAAGTGGTTGCAAAGCGCCGTTGGCGG
CATGAGCAGGGGACAAGGTGGTTGCAAAGCGCCGTTGGCGGCATGAGCAG
GGGACAAGACTCTGGATCATCTGGTGGTGCGATAGTCGACAATGGCCGCG
CCACCGTGGCAGTCAAGACTCTGGATCATCTGGTGGTGCGATAGTCGACA
ATGGCCGCGCCACCGTGGCAGTCAAGACGGCTCCTGGGGGGGATGAGAGA
GATGAGGAAGAACAAATGATGGCGGAGGAGGAGAAACCTGAGGCGAAGAA
CGAGGAAACCTCTGAAGAGGAAAACGAGAAAGAATGTACGGCTCCTGGGG
GGGATGAGAGAGATGAGGAAGAACAAATGATGGCGGAGGAGGAGAAACCT
GAGGCGAAGAACGAGGAAACCTCTGAAGAGGAAAACGAGAAAGAATGT back to top
|