mRNA_L-elsbetiae_contig5808.14243.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5JDT4_9PHAE (MULE domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT4_9PHAE) HSP 1 Score: 726 bits (1873), Expect = 2.000e-248 Identity = 379/657 (57.69%), Postives = 481/657 (73.21%), Query Frame = 1 Query: 94 PDSGENEHARPAVFENELTREEIEAQADLIRQLVDRGINTAGIHKAVQPPGRRLGQRGKQLVRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATT-GSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPARPATVGAACSVQLPPFDPDPDVSSHSGPNVRAAAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQRNEHTSQVFAGAISRPTPAV 2061 P S EH P VFENE+TRE++EA++ I+++ D+G+ TA ++K + G+RLG++G+Q+VR + ++ K+K+S GGLNDA++L+ QL+ GAF R+KLD++ L C+A AHE Q+ N KY V+ D TFNT+ Y KL+FIV VDKENHTQIAMQAL+ E+HE+FVF+ E+FK+LI G SP+VIFTDTD++ MSAIA+V+PGALNKLC+WH +NV+ +GKGL IL +LR FK AAYA T EAF+ K +LL +L + ++KY+ I + RAGKWA+FVHPGLHTLG+A+TQR E N A KKLVTR +A+L+RA++ KVQDD IRTQRRSE GN RVSL +N+S AENV+ L F F+ A+ E+CST AKEDT I ACLGY K V +GE VRR+L F DPTK NL+ DT+ GE IDP+E T AGVH+A+RAPVSHFAGLLRDQ V LVRV + +++F HLV++GPDGFFLCTCLR LVYGLLCPHGLK + D G ++F GAS++ RWR+S T WTLE LAAKPA A C V+LPPF+ D SHSG NV+AAA+ NG GK+MGVLLR + +L I RVLESTK FF+QQLEVEKRSQR T+QVF G S PT + Sbjct: 3 PGSEGTEHDPPRVFENEITREDLEAESAHIKKMCDKGVKTAEVYKYLTDTGKRLGEKGRQMVRLMRVQFDKDKTSSRGGLNDAQQLLHQLEQDGAFKRYKLDDENRLTCLAWAHEEQRRNTEKYFPVVVSDTTFNTSKYNHKLAFIVVVDKENHTQIAMQALLDTERHESFVFLMESFKELIRGSSPKVIFTDTDQSEMSAIAQVFPGALNKLCYWHKEQNVKAHGKGLPGGILQGILRKFKAAAYAPTLEAFVEIKTELLSMLDPESGVYKYMLGEIFNPGRAGKWASFVHPGLHTLGIASTQRVEGTNCAVKKLVTRTGDLADLERALLGKVQDDAIRTQRRSEVGNTKRVSLSRNMSPAENVKQNLRGYFAFITAALTHERCSTHAKEDTGVMIDACLGYSTKIVASGETDVRRILQMFVDDPTKVNLMLDTNSGEFIDPAEPTAVAPAGVHLASRAPVSHFAGLLRDQAVDKLVRVALLQ-REEFCHLVALGPDGFFLCTCLRPLVYGLLCPHGLKAMFDTGANKFNGASIAPRWRESSTPWTLEPLAAKPAMLDPGAAECPVELPPFNVTTDDISHSGTNVKAAAYANGTNFGKDMGVLLRQ-ITTLEGIDRVLESTKIFFKQQLEVEKRSQRQASTTQVFTGTFSHPTSGM 657
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE) HSP 1 Score: 711 bits (1836), Expect = 6.930e-240 Identity = 413/873 (47.31%), Postives = 539/873 (61.74%), Query Frame = 1 Query: 1 VGCSFKVGLWWPSDRSSPKLAETCLSLRHRTPDSGENEHARPAVFENELTREEIEAQADLIRQLVDRGINTAGIHKAVQPPGRRLGQRGKQLVRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPARPATVGAACSVQLPPFDPDPDV--SSHSGPNVRAAAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQRNEHTSQVFAGAISRPTPAVQQGAAGGTGRAXXXXXXXXXXXXXXXXRGIRGREETASTERGQGTGEGGGTDSAGLVTGATSQCRFAGEGGAGSGGLATGVGAPSPTIPPLFEMQPPAXXXXXXXXXXXXXXPPFTLQTAPMNGAQTSAGTAAPLHFPGNIDVPGTGGTQGSPAPPPPAEFAVFEQILAPLVQRHRGTSKRQKK 2613 +GC+F+VGLWW ++ +P +A+ L L H T SG EH RP ENE++ EIEA+ D +R+L + T IHK ++ G+RLGQ GKQ VRT++A++ E+ + NG NDA+ LV LQN AF+RFK E G + CIA A + Q++ A++YH +I QDNTFNTN YKF L+ IV VDKENHTQIAMQAL++NE+ E+F FIFE+FK+L G SP V+FTD D AAM AIA VYP ALNKLC WHTMEN+R++G+GL + +L +VL FK AAYA T+E FL + ++L +LP + M+KY+A +I AERAGKWA++VHPGLHTLG+A+TQR ES NAA K +VTR+ SM +L+ I+AKVQD +T+RRS G +VS+R+ SA V + F F+L+A+ E+ ST A EDTEAQI+A L Y+ +TVV+ D RRLLD+ ADP +A L+YDT GE +DPS T ++G+ M +R V HFA LLR QNV +VR++ + +FGHLV++G DGFFLCTCLRQLVYGLLCPH +K L I RF GAS+ WRDS T WT+EALAA+PAR +T A Q+PP +PD S SGP + A + NG++LGKE+G L ++ + S++ I RV+++ NF RQQ+EVEKRS R E +VF G S+PT +G A RG RG T +RG GLATG +P +P +Q P P LQT P NGA T G PL N+D G GG SP P PA E + PL Q+ G SKR K+ Sbjct: 188 IGCAFEVGLWWAANSPAPIVAKGKLCLTHHTKTSGGKEHERPRAIENEMSVAEIEAKRDFLRELHASRVKTTEIHKTLERVGKRLGQAGKQKVRTMMAQFDAERQAENGAFNDAQLLVGHLQNTEAFLRFK-HEDGRMTCIAWASQDQKVLAMRYHKIIIQDNTFNTNVYKFFLALIVVVDKENHTQIAMQALLANERSESFEFIFESFKELCGGGSPGVVFTDCDSAAMLAIANVYPSALNKLCIWHTMENIRDHGRGLAEGVLPAVLGKFKAAAYAQTQEYFLQLRGEILDMLPPESHMYKYMAVNIFGAERAGKWASYVHPGLHTLGIASTQRVESMNAAVKAVVTRKGSMMDLNDGIMAKVQDGMAKTERRSTGGKVNKVSMRQAKSAMSRVTTSHVDQFRFILDALAHEKSSTHAMEDTEAQIVAALTYQDRTVVSDADAARRLLDDLVADPAQAKLVYDTRSGELVDPSHETPDASGITMVSRTSVPHFADLLRGQNVDAVVRISKITPPSEFGHLVAVGSDGFFLCTCLRQLVYGLLCPHVIKALWSQRITRFNGASIGPWWRDSSTPWTMEALAARPARLSTGAAGAHGQVPPLVGNPDAIGSLDSGPKLSAYGYANGLSLGKELGALFKE-VGSVAGIHRVVDTVFNFARQQVEVEKRSLRQESRGRVFTGTFSQPTTVTGRGGASS--------------------RGGRGSTGTGRGDRGX----------------XXXXXXXXXXXXXXXVGLATGTSSPVSGVP---TVQNPVAAGAVPA--------PSVLQT-PANGAHTFQGLGTPLRSLNNVDF-GGGGQARSP-PQEPAHLMHMEHLHPPLAQKQTGQSKRHKR 1008
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE) HSP 1 Score: 588 bits (1515), Expect = 1.260e-195 Identity = 313/635 (49.29%), Postives = 426/635 (67.09%), Query Frame = 1 Query: 1 VGCSFKVGLWWPSDRSSP--------KLAETCLSLRHRTPDSGENEHARPAVFENELTREEIEAQADLIRQLVDRGINTAGIHKAVQPP-GRRLGQRGKQLVRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPAR-----PATVGAACSVQLPP-FDPDPDVSSHSGPNVRAAA 1860 VGC+FK LWW + + +P LAE + L H TP S EHA P F+NE++R++I +D I L D G+ T +HK VQ G+RLG+ GK LVR I+ K +++ NDA+E + LQ + A + F+ D + + IA A +VQ+ A+++HSVI D TFNTN YKF L+ +V VD ENH+QI MQAL+SNE+ E+F F++E+ K+L G SP+V F+D D A +AI V+PG ++KLC WHT N+RE+G GL + +L+ V+R F+ AA+A T E FL K +LL LP++ M+ Y+A +I R KWA+ VHPGLHTLG+ +TQR E+ N+A K+LVTR +M EL+RA++ KVQDD +T+R+S+ G R L ++S+ ENV+ LLK+F FV++AV+ E+ ST A +DTEAQ++A LGY +V GED R LLDE AD KA L YDTS G+ IDP +ATTG+AGV M +R V HFA LLRDQNV+++VRV++ + +FGHLV++GPDGFFLCTCLRQL +GLLCPHGLK + G+DRF GA++S RWR+S T W + LAAKPA A+ G +V PP DP+ +S SGPNV + A Sbjct: 90 VGCNFKTVLWWGARQDAPVVGKASLSALAEGGMCLTHHTPTSNGKEHAPPTTFDNEMSRQDIYEMSDFIIDLADSGVKTVDLHKTVQQKSGKRLGREGKALVRCIVEKHLEDSRE---AFNDAQEFLAHLQRSKAHLWFRADNQSRITSIAWASDVQKAAAVRFHSVIITDTTFNTNRYKFSLALVVVVDHENHSQIVMQALLSNERQESFQFVYESLKELCEGGSPKVCFSDNDAAETNAIELVFPGTVHKLCIWHTYGNIREHGGGLGEGVLSEVIRKFRKAAFAQTVEYFLQAKTELLAFLPRESKMYNYMANNIFGKGRVEKWASCVHPGLHTLGICSTQRVEAMNSAVKRLVTRSGTMVELNRALMGKVQDDANKTKRKSDGGRLPRAPL-SSMSSMENVKRGLLKHFSFVVDAVKHERSSTHAIKDTEAQVVAALGYNATCLVRGEDEARLLLDELVADADKAKLWYDTSSGDLIDPLQATTGAAGVSMVSRTSVPHFAHLLRDQNVNSVVRVSMITPPSEFGHLVALGPDGFFLCTCLRQLEHGLLCPHGLKAMWTEGVDRFNGATISPRWRESETPWLMADLAAKPATLSAGLAASAGLPVAVSQPPRVDPN-STASRSGPNVPSYA 719
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE) HSP 1 Score: 553 bits (1424), Expect = 1.200e-184 Identity = 307/548 (56.02%), Postives = 380/548 (69.34%), Query Frame = 1 Query: 382 VRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLD-HGIDR---FVGASLSGRWRDSGTQWTLEALAAKPARPATVGAACSVQLPPFDPDPDVSSHSGPNVRA----AAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQ 2001 ++FK+DE + CIA A+ Q+ NA +YH VI QDNTFNTN YKF L+ IV VD EN+TQIAMQAL+SNE+ E F+F+ E FK+L G PQV FTD D+ AM AIAEV+PGALNKLC W+ M+N+R++GKGL L SVL+ FK AA+AA E F+ YK +L LLP++ AMHKY+ I A R KWA+ VHPGLH LG+A+TQR E+ A K +VTR +M +L+RA+++KVQDD I+TQ R++ G TRV +RK VS E+V+ L++F FV A++ E+CS AKED E QI A GY+ TV TG+D VR LL E ADPTKANL YD GE IDP G A V MATR V+HFA LL DQNV LVR+TIF+AQ +FGHLV++GPDGFFLCTCLR LVYGL CPH +K L G D+ F A +S RWRDS T WT+ LAAKPAR AT A + LP DP+ V S+S V A A + + ++ GK+MG LR + S + IQRVLEST +FF QQLEVEKRSQ Sbjct: 1 MKFKMDEHNRIKCIAWAYPEQEQNARRYHRVILQDNTFNTNVYKFFLALIVVVDMENYTQIAMQALLSNERSEDFIFLMETFKELCGGLMPQVAFTDCDQGAMGAIAEVFPGALNKLCIWYAMQNIRKHGKGLADGALQSVLQNFKAAAFAARVEDFVRYKTELPRLLPQESAMHKYMEGTIFGAGRVEKWASCVHPGLHKLGIASTQRCEATFTALKLVVTRNGNMVDLNRALLSKVQDDAIKTQSRNKGGAVTRVPVRK-VSPQESVKASFLRHFSFVFEAMEHERCSRHAKEDVEEQIFAAFGYEAVTVATGQDAVRTLLAELVADPTKANLAYDICSGEFIDPGGEAAGPAHVTMATRTSVAHFADLLHDQNVEELVRITIFNAQSEFGHLVALGPDGFFLCTCLRMLVYGLPCPHCIKALAHMRGNDKVFSFNAACISPRWRDSETSWTMAHLAAKPARLATADAELA-GLPVIDPNSVVVSYSSATVAATVAAAGYADAVSYGKKMGGKLR-GITSSAGIQRVLESTYDFFLQQLEVEKRSQ 545
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI) HSP 1 Score: 516 bits (1329), Expect = 7.020e-169 Identity = 272/481 (56.55%), Postives = 340/481 (70.69%), Query Frame = 1 Query: 277 VRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSA-----------------------ERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLK 1650 VR++ + E+ + NG NDA+ V+ LQ + AF+RFK DE+G + IA A++ Q+ NA++YHSVI QDNTFNTN YKF L+ IV VDKENH+QIAMQAL+S+E+ E+F F+FE+FKQL G +P+V+FTD D AAM AIA+VYP ALNKLC WHTM N+RE+G GLEK +L VL+LFK AAYA TEE FL K LL LLP + M++Y+ ++I RAGKWA++VHPGLHTLG+A+TQR ES NAA KKLVTR+ M +L RA++ KVQDD RTQRR+ G RV+++ + S E+ R + L+ F FVLNAV+ EQCS A EDTEAQIL L Y+ VV E+ RRL +E ADPTKANL YDT GE +DPS T+ +AGV M +R V HFA LLRDQNVHT+VR+T S + GHLV++GPDGFFLCTCLRQLVYGLLCPH +K Sbjct: 3 VRSMRDAFDAERKADNGVFNDAQLFVSHLQQSEAFMRFKADEQGRITSIAWAYQQQKYNAVRYHSVIVQDNTFNTNIYKFHLALIVVVDKENHSQIAMQALLSDERSESFEFVFESFKQLCEGGTPEVVFTDCDAAAMLAIAKVYPSALNKLCIWHTMGNIREHGGGLEKGVLGQVLQLFKAAAYAQTEEYFLQCKGALLDLLPPESKMYEYMEKNIFGTGFRQLVTSSVSCPLSLSRPVTCDRRAGKWASYVHPGLHTLGIASTQRVESMNAAVKKLVTRKGDMVDLGRALLGKVQDDINRTQRRNLGGTVARVAVQGH-SYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK 482
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE) HSP 1 Score: 379 bits (973), Expect = 5.260e-118 Identity = 236/567 (41.62%), Postives = 324/567 (57.14%), Query Frame = 1 Query: 373 GAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQ-VIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEA--QILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPARPATVGAACSVQLPPFDPDPDVSSHSGPNVRAAAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQRNEHTSQVFAGAISRPTPAVQ 2064 G ++RF LDE G + IA A + Q+ NA++YHS+I QDNTFNTN YK+ L+ V VDKEN+T IAMQAL++NE+ E F F+F F++LI G P+ VIFTD D A M+AI + P + KLC +H EN+R++GKGL + +LA+V+R F A A TEE +K+ L LL M+ Y+ +++ + +WA + HPGL TLG+++TQR ESANAA K ++R +M +++RAI KV DDT K DT+ + LA +GYK +T+ TG V+RLL + A+P A L+Y+T+ G+ V + TR V FA LLRDQ + LVRVT +Q + HLV++GPDGFFL TCLR LV GL C H L+ + D + F GA ++ RWRD WT+ LAAKPA AT ++P DP V SHS VRA+A+ + A GK + + +D++ I RVL++ KN RQ +EVE RSQ N TS+VF G I+ PT A + Sbjct: 4 GCWMRFTLDENGRINRIAWALDEQKTNALRYHSLIIQDNTFNTNQYKYHLALKVAVDKENYTHIAMQALLANERTEDFEFLFREFRELIEGAQPEYVIFTDADAATMAAIDKESPASRGKLCQFHMGENMRKHGKGLGEGVLAAVIRQFHKAGNAQTEE----HKEDLFKLLHPGSHMYTYMTDYVFVPKWVHRWAMYGHPGLPTLGISSTQRVESANAALKPAMSRSGTMVDVNRAIRGKVTDDT---------------------------------------------------KNDTDMSDEALAAMGYKAETLATGNCDVQRLLADLVANPAGAGLLYETTSGD-------------VTLTTRTSVKFFAELLRDQVLERLVRVTNVGSQTNHCHLVALGPDGFFLYTCLRILVEGLGCGHALRTIHDADLG-FTGACIAPRWRDGIMPWTMAPLAAKPAVLATTATGVPGEMPAPPADPGVFSHSKTTVRASAWASCCAFGKRLATITA-GIDNIPGISRVLDNLKNQARQMVEVELRSQNNASTSRVFKGVITTPTTAPE 500
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE) HSP 1 Score: 381 bits (979), Expect = 8.640e-115 Identity = 252/682 (36.95%), Postives = 365/682 (53.52%), Query Frame = 1 Query: 58 LAETCLSLRHRTPDSGENEHARPAVFENELTREEIEAQADLIRQLVDRGINTAGIHKAVQPPGRRLGQRGKQLVRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNAT-RVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVT--IFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVL--LDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPARPATVGAACSVQLPPFDPDPDVSSHSGPNVRAAAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQRNEHTSQVFAGAISRPTPAVQQGAAGGTG 2088 +A+T + L H G EH FENE+T+EE+E + LI +L + ++ I KA+Q P +RLG +GK++VRT+I+ +E ++ + DAR+ + + Q +VRF+LDE + IA A + QQ NA++Y S+I QDNTFNTN YK+ L+ IV VD EN+TQIAMQAL++NE+ E F F+F F++L G P+VIFTD D+AAM+AI E P + KLC +H EN+ ++G+GLE+ +LA V +F AA LLL P + S+ W F+ H + + +S + K D + R++ +G A + + K S E V L+ F +V A++ +CS +A +D + LA + Y + + TG D V R + +DP A L YD T+G TR V FA LL DQ + LVR+T ++GHLV++GPDGF LCTCLR LVYGL C HGL+ + D G++ G ++ RWRDS WT+E L AK A PA A +PP DP V SHS P RA+ + + +A GKE+ L+ D +D+++ QRVL + N+ +Q +EVE RSQ T+++F G ++RP A G G Sbjct: 1 MAQTGMWLHHCVGIIGA-EHEPRRTFENEMTQEEVEKETGLILRLHFQKVDKPQIFKALQTPTKRLGAKGKEMVRTVISGAERESAA---DVEDARQFLGKFQKEDVWVRFQLDEDRRVARIAWALDEQQGNALRYSSIIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPEVIFTDADQAAMTAIDEECPASHQKLCLFHMDENLMKHGRGLEQGVLAGVEGMFHAAA---------------LLLRPVMSPRGLACSAPFSA------WQMFLK---HKANLFKQLKPDSH--------------------MYNKYMADFVFEPRQAVSGTAALQTVMPKAASPLETVTNSWLEGFDYVRRAMRHVECSAYAMKDMSTEALAAMAYDVEILGTGNDDVHREIARMVSDPAIAGLSYDP-----------TSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGLN---GGCIASRWRDSTQPWTMEHLTAKRAAPANTAAGVPGDMPPAPMDPGVFSHSKPTARASNWASCVAFGKELASLMTD-VDAIAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTGVVARPVTATDPPEGGPVG 619
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5LBK2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBK2_9PHAE) HSP 1 Score: 357 bits (916), Expect = 2.110e-111 Identity = 197/365 (53.97%), Postives = 258/365 (70.68%), Query Frame = 1 Query: 55 KLAETCLS---LRHRTPDSGENEHARPAVFENELTREEIEAQADLIRQLVDRGINTAGIHKAVQPPGRRLGQRGKQLVRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNAYKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAAT---EEAFLAYKQQLLLLLPKDGAMHKYIAEHISSA---ERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQR 1122 + ETC+ L H SG H P ENE+TRE++EA++ I+++ ++GI TA I+K +Q G+RLG +GKQ++R + AK+ K+K + GGLNDA++L+ QL+ GAF FKLDE+ L +A AHE Q+ NA KY +I D TFNT+ Y KL+FIV VDKEN TQIAMQAL+ E+HE+FVF+ E+FK+LI G SPQVIFTDTD++ MSAIA+V+PGALNKLC+WHT +NV+E+GKGL + ++ VLR FK AAYA T E L+ L +L + M+KY+A I SA RAG+WAAFVHPGLHTLG+A+TQR ES N A KKLVTR + +LDRAIV KV D I+ +R Sbjct: 3 RALETCVRDVCLWHTYQGSGGIGHDPPRDIENEMTREDLEAESANIKKMHEKGIKTAEIYKYLQETGKRLGDKGKQMLRLMRAKFDKDKQNSRGGLNDAQQLLHQLEEDGAFKNFKLDEENRLTDVAWAHEEQRRNAEKYFPIIVSDTTFNTSKYNHKLAFIVVVDKENLTQIAMQALLETERHESFVFLMESFKKLIRGSSPQVIFTDTDQSEMSAIAQVFPGALNKLCYWHTEQNVKEHGKGLPQGVIQGVLRKFKAAAYAPTVGVREILLSATP--LAMLDPESRMYKYMAGDIFSATHASRAGRWAAFVHPGLHTLGIASTQRVESMNCAFKKLVTRTGDLFDLDRAIVGKVNDGKIKAER 365
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5KNT7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT7_9PHAE) HSP 1 Score: 365 bits (938), Expect = 3.500e-111 Identity = 250/593 (42.16%), Postives = 322/593 (54.30%), Query Frame = 1 Query: 508 YKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQ-----------LLLLLPK-----------------DGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKE-----------------------------------DTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVTIFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPARP----ATVGAACSV-------QLPPFDPDPDVSSHSGPNVRAAAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQRNEHTSQVFAGAI-SRPTPAV 2061 YKF ++ IV VDKENH+QIAMQAL+S+++ E F FE+FKQL G +P V+FTD D AAM AIA+VYP ALN LC WHTM N+RE+G GLE +L +L LFK AAYA TEE + Q LLLLL + + ++ ++ RAG+WA++VHPGLHTLG+A+TQR ES NAA KKLVTR+ L RA++ KVQDD R+QRR+ G RV+++ + S E+ R + L+ F FVLNAV EQCS A E DTEAQIL L Y+ K VV GE+ RRL +E ADPTKANL YDT GE +DPS T+ +AG M +R V HFA LLRDQNV C R P + +DR +S S S + A P+RP A++GAA Q+ P DP+P VSS SG N+ A A+ NG+ LGKE+G + ++ S++SIQR++ES K+ +QQ+EVEKRS R+E TS+VF G + P PA Sbjct: 7 YKFHIALIVVVDKENHSQIAMQALLSDKRSEFFESAFESFKQLCKGGTPGVVFTDYDAAAMLAIAKVYPSALNNLCIWHTMGNIREHGGGLENGVLGQILGLFKAAAYAQTEEGKHRLEWQPMLSGPRSRDVLLLLLRRCLSPVSPVCRSRQLVTSSVSCPPSLSRPVTRDRRAGRWASYVHPGLHTLGIASTQRVESMNAAVKKLVTRKGDNVHLGRALLGKVQDDINRSQRRNLGGTVARVAVQGH-SYVEDFRTKHLRTFNFVLNAVNYEQCSQHATEVSCGGLSLWPWTDPDLFSPITPNRAPLRCGMPCWRDTEAQILGALHYEAKPVVRGEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSDAAGFSMVSRTSVPHFAELLRDQNVTRW-------------------------CASRRS-------PRRPGAVTSSPLDRTASSSASACGSLSTGYF-----ARTPSRPCACQASIGAAGLTGPAGPPGQMLPVDPNPIVSSQSGTNLSAYAYANGVTLGKELGGMFKEV--SVASIQRLVESMKHCTKQQIEVEKRSLRDESTSRVFTGTPPAHPCPAA 559
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE) HSP 1 Score: 363 bits (931), Expect = 1.950e-107 Identity = 254/718 (35.38%), Postives = 354/718 (49.30%), Query Frame = 1 Query: 34 PSDRSSPKLAETCLSLRHRTPDSGENEHARPAVFENELTREEIEAQADLIRQLVDRGINTAGIHKAVQPPGRRLGQRGKQLVRTIIAKWVKEKSSRNGGLNDARELVTQLQNAGAFVRFKLDEKGVLVCIA*AHEVQQLNAIKYHSVISQDNTFNTNA----------------------------------------YKFKLSFIVCVDKENHTQIAMQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGALNKLCFWHTMENVREYGKGLEKDILASVLRLFKGAAYAATEEAFLAYKQQLLLLLPKDGAMHKYIAEHISSAERAGKWAAFVHPGLHTLGMATTQRSESANAAQKKLVTRRASMAELDRAIVAKVQDDTIRTQRRSEAGNATRVSLRKNVSAAENVRVRLLKNFGFVLNAVQDEQCSTFAKEDTEAQILACLGYKGKTVVTGEDGVRRLLDEFEADPTKANLIYDTSCGEPIDPSEATTGSAGVHMATRAPVSHFAGLLRDQNVHTLVRVT-IFSAQDDFGHLVSIGPDGFFLCTCLRQLVYGLLCPHGLKVLLDHGIDRFVGASLSGRWRDSGTQWTLEALAAKPARPATVGAACSVQLPPFDPDPDVSSHSGPNVRAAAFGNGIALGKEMGVLLRDNLDSLSSIQRVLESTKNFFRQQLEVEKRSQRNEHTSQVFAGAISRPTPAVQ 2064 PS+ + + + +R + + G EH RP NE+T E ++ Q DLIR + + +T IHK V+ G LG RGKQ R ++RF +DEKG + +A A E Q+ A++Y +I QDNTFNTN YK+ L+ IV VDKEN+T I QAL+++E+ E F F+F AF+++I G PQVIFTD D AAM+AI + P + ++LC +H EN+R++GKGL + +LA V+R+F AA+A TEEA KQ + LL M+ Y+A+ + + +WA F HPGL TLG+ +TQR ES N+A K + R +M ++ RAI KVQ D +T S +A +D + LA +GY T+ TG D V+RLL + A+P A L+Y T GE A + + TR + FA LLRDQ V LVRVT F +Q + HLV++GPDGFFLCTCLR GL C H L+ L D + F GAS++ RWR A +LP DP V + S VR++A+ + A GKE+ + +DS+ +I RVLE+ K RQ ++VE RSQ TS+VF G ++RPT Q Sbjct: 58 PSNIAVRSVEKWIGEVRSPSSEDGSVEHERPREMANEMTHEMVQEQEDLIRLMYFQHNDTRAIHKTVERDGMVLGPRGKQQER-------------------------------CWMRFTMDEKGCINRVAWALESQRTTALRYFPLIIQDNTFNTNKFDSAFTYETKASLSYRFENGFVKTCACPLCAQFLGYAPTRYKYHLALIVVVDKENYTHIVFQALLASERTEDFDFLFRAFREMIGGAQPQVIFTDADAAAMAAIQKECPWSRHQLCLFHLDENLRKHGKGLGEGVLAGVIRMFHKAAFAPTEEA----KQDVFNLLAPGSDMYTYMADSVFGPKWVHRWAKFGHPGLPTLGITSTQRVESTNSALKPAMQRSGTMVDVHRAISKKVQSDANKTT-------------------------------------------SAYAMKDMSDEALAAMGYTAHTLATGNDNVQRLLADLGANPAGAGLLYGT--GEE---------GADITLTTRTSIKFFAELLRDQVVDRLVRVTNTFGSQTQYCHLVALGPDGFFLCTCLRIPTDGLGCRHALRALKDGDVG-FTGASIANRWR----------------------AGLPGELPAAPADPSVFTCSKATVRSSAWASCCAFGKELASIT-STIDSIPAITRVLENLKIQARQMVDVELRSQHEASTSRVFKGVVARPTNGTQ 662 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5808.14243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5808.14243.1 >prot_L-elsbetiae_contig5808.14243.1 ID=prot_L-elsbetiae_contig5808.14243.1|Name=mRNA_L-elsbetiae_contig5808.14243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=687bp MQALVSNEQHETFVFIFEAFKQLIHGRSPQVIFTDTDRAAMSAIAEVYPGback to top mRNA from alignment at L-elsbetiae_contig5808:6143..11479+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5808.14243.1 ID=mRNA_L-elsbetiae_contig5808.14243.1|Name=mRNA_L-elsbetiae_contig5808.14243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5337bp|location=Sequence derived from alignment at L-elsbetiae_contig5808:6143..11479+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5808:6143..11479+ >mRNA_L-elsbetiae_contig5808.14243.1 ID=mRNA_L-elsbetiae_contig5808.14243.1|Name=mRNA_L-elsbetiae_contig5808.14243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4122bp|location=Sequence derived from alignment at L-elsbetiae_contig5808:6143..11479+ (Laminarionema elsbetiae ELsaHSoW15)back to top |