mRNA_L-elsbetiae_contig5800.14234.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: D8LBB2_ECTSI (Novel protein (Wu:fd05a10) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB2_ECTSI) HSP 1 Score: 385 bits (988), Expect = 2.040e-129 Identity = 196/311 (63.02%), Postives = 228/311 (73.31%), Query Frame = 1 Query: 121 GDHVSVVSSMASYETPSEGSRSXXXXXXXXXXXCQTVNRLDEAAVLSVINEYRREHGAPSLQWSATCAREAHKRANHRPVTASAADFGENLARSTSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVWVVAYFFPKGNQAGDFARNVLPLGSVYDGDDNMVRLAVDNSSSAAAGC--APP---------AFVRVATVNTEVKALRSANGKFRFQVLPDRNIVVRQAEKIVWASGSRPSRQPAVSSPFRLVLQKNGDLVAYDSESRAFWSSDTAGCGPA 1020 GDH S+VSS+A ++T G S LDE+ VL INEYRREHGAP L+WS+ CAREA +RA+H + +A++GENLARST +WRDPT ACIGS+ +WQKEE GYDY KPGLSS+T HFT NVW+LTTHVGFGV RA YKGKST+WVVAYF P+GNQAGDFARNVL GSVY GDDNMVR AVD S + AP +VRV T N +VK LRSANGKF FQVLPDRNI+VRQAE+I+W+SGSR + +P V +PFRLVLQKNGDLV YDS +R FWSS+TA CGPA Sbjct: 21 GDHASIVSSIAPFDTVCSGGSSSTTSSNARRI-------LDESEVLRCINEYRREHGAPMLRWSSACAREAQRRASHE--SGPSAEYGENLARSTDHSWRDPTIACIGSIHQWQKEEAGYDYGKPGLSSNTSHFTANVWRLTTHVGFGVFRATYKGKSTMWVVAYFSPRGNQAGDFARNVLRRGSVYHGDDNMVRRAVDTVSPSGRHPRKAPXXXXXXXXXGTYVRVETANADVKVLRSANGKFTFQVLPDRNIIVRQAERIIWSSGSRSAGKPPVGAPFRLVLQKNGDLVGYDSAARVFWSSETANCGPA 322
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: A0A6H5KHY2_9PHAE (Bulb-type lectin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY2_9PHAE) HSP 1 Score: 300 bits (769), Expect = 6.460e-98 Identity = 150/223 (67.26%), Postives = 166/223 (74.44%), Query Frame = 1 Query: 460 QKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVWVVAYFFPKGNQAGDFARNVLPLGSVYDGDDNMVRLAVDNSSSAA-----------AGCAPPAFVRVATVNTEVKALRSANGKFRFQVLPDRNIVVRQAEKIVWASGSRPSRQPAVSSPFRLVLQKNGDLVAYDSESRAFWSSDTAGCGPAPYTLTXXXXXXXXLFDGRLVARWAT 1095 QKEE YDY KPGLSS+T HFT NVW+LTTHVGFGV RA YKG+ST+WVV YF P+GNQAGDFARNVLP GSVY GDDNMVR AVD S + AG AP A+VRV T +VK LRSANGKF FQVLPDRNI+VRQAE+++W SGSR + +P +PFRLVLQKNGDLV YDS R FWSS+TA CGP PYTLT LFDGR ARWAT Sbjct: 13 QKEEARYDYGKPGLSSNTSHFTANVWRLTTHVGFGVFRAKYKGESTMWVVGYFSPRGNQAGDFARNVLPRGSVYHGDDNMVRRAVDTVSPSGQHPRKAPAGRHAGEAPGAYVRVETAYADVKPLRSANGKFTFQVLPDRNIIVRQAERVIWNSGSRSADKPPFGAPFRLVLQKNGDLVGYDSSGRVFWSSETAKCGPPPYTLTMQDDGQCVLFDGRWKARWAT 235
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: D7FLA1_ECTSI (Contains SCP domain which is found in plant PR1 and cysteine-rich proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA1_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.690e-28 Identity = 71/151 (47.02%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 238 LDEAAVLSVINEYRREHGAPSLQWSATCAREAHKRANHRPVT--ASAADFGENLARSTSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYK-GKSTV-WVVAYFFPKGNQAGDFARNVLPLGSV 678 +D +L IN +RR HGA LQW ATCA A AN V FGE+LA + T D TT CI ++ WQ+E YDY P S +T HFT NVW+ TTHVGFG A+ + GK V +VVA FF GN F NVLP SV Sbjct: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDGGRFGESLA--VTDTNYDATTECINAINLWQQEGTLYDYENPAFSPATRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFTPGNVVDQFEGNVLPPVSV 149
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: A0A6H5J7K6_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K6_9PHAE) HSP 1 Score: 107 bits (266), Expect = 6.750e-25 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 226 TVNRLDEAAVLSVINEYRREHGAPSLQWSATCAREAHKRANHRPVTASAADFGENLARSTSLTWRDPTTACIGSLQRWQ 462 T LDE+ VL INEYRREHGAP L+WS+ CAREA +RA+H + +A++GENLARST +WRDPT ACIGS+ RWQ Sbjct: 17 TRRSLDESEVLCCINEYRREHGAPMLRWSSACAREAQRRASHE--SGPSAEYGENLARSTDHSWRDPTIACIGSIHRWQ 93
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: A0A4U8YVD0_OULSP (mRNA n=1 Tax=Oulactis sp. TaxID=2093647 RepID=A0A4U8YVD0_OULSP) HSP 1 Score: 96.3 bits (238), Expect = 2.010e-19 Identity = 56/146 (38.36%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 241 DEAAVLSVINEYRREHGAPSLQWSATCARE----AHKRANHRPVTASAADFGENLARSTSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVWVVAYFFPKGNQAGDFARNVLP 666 D + L+ N R H A LQW AT A A A + S+ +GENL S++ +C +++ W E YDY PG +S+T HFT VWK TTHVG G++ G ++ +VVA + P GN G FA NVLP Sbjct: 80 DVSECLTANNLNRSSHQATDLQWDATLASASADWALTLAQQNSMQHSSGPYGENLYYSSTSNI-GTVASCKDAVEAWYSEIAYYDYNNPGFASNTGHFTQVVWKATTHVGVGIAAVTSGGFTSTYVVARYTPAGNLQGAFAANVLP 224
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: A0A1E3QPY5_9ASCO (SCP domain-containing protein (Fragment) n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QPY5_9ASCO) HSP 1 Score: 91.3 bits (225), Expect = 1.540e-18 Identity = 54/150 (36.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 244 EAAVLSVINEYRREHGAPSLQWSATCAREAHKRAN-----HRPVTASAADFGENLARSTSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVW---VVAYFFPKGNQAGDFARNVLPL 669 E +L+ IN R HG P L W++T A A+ N + + S +GENLA S +G+++ W E Y++A PG SS+T HFT VWK +T +G Y +T+W V+ F P GN G++A+NVLPL Sbjct: 3 ETTILAAINAKRALHGVPPLVWNSTMATYANNYGNSAYHCNGVLVHSGGPYGENLAAGYST---------VGAVEAWYDEIANYNFADPGFSSNTGHFTQLVWKSSTQLG-----CAYIDCTTIWGEYVICEFAPPGNINGEYAQNVLPL 138
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: A0A2C9K849_BIOGL (SCP domain-containing protein n=5 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K849_BIOGL) HSP 1 Score: 87.8 bits (216), Expect = 3.230e-16 Identity = 60/183 (32.79%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 142 SSMASYETPSEGSRSXXXXXXXXXXXCQTVNRLDEAAVLSVINEYRREHGAPSLQWSATCAREAHKRANHRPVTAS--------AADFGENLARSTSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVWVVAYFFPKGNQAGDFARNVLP 666 SS S +T + S + ++R+ + A L N+YR+ HG+P L+ S+ R A + A H VT S GENLA T + D T W E E YD+++PG T HFT +W+ TTH+G G+S + VA + P GN G+F NVLP Sbjct: 69 SSDGSVDTVRQKWESKMKDAPEKSPPLKPIDRIRQEA-LEAHNKYRQMHGSPPLELSSELNRMAQQWAEHLAVTTSFEHSPKEKREGTGENLAAHTDIITGDQVT------DMWYNEIEDYDFSQPGFKLGTGHFTQLIWRNTTHMGLGMSSQTARD-GMYRFVANYRPSGNWKGEFQENVLP 243
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: UPI0002658079 (Golgi-associated plant pathogenesis-related protein 1 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658079) HSP 1 Score: 85.5 bits (210), Expect = 9.820e-16 Identity = 54/140 (38.57%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 268 NEYRREHGAPSLQWSATCAREAHKRANHRPVT-----ASAADFGENLARSTSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLS--SSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVWVVAYFFPKGNQAGDFARNVLP 666 N YR +HG P L+W + CA +A A+H T ++ FGENL S+S R P ++ W E + +P S S HFT VWK TTHVG + KG S V+VVA + P GN G F NV P Sbjct: 72 NHYRSKHGVPPLEWCSKCAAKAQAHADHMAQTNNFSHSTEKGFGENLFNSSSS--RGPDINADKAVDSWYNEISEMKFGQPAPSNFSQVGHFTQVVWKETTHVGMAYA---VKGNS-VFVVANYLPPGNFVGKFHENVFP 205
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: A0A177UM94_9BASI (SCP domain-containing protein n=1 Tax=Tilletia walkeri TaxID=117179 RepID=A0A177UM94_9BASI) HSP 1 Score: 87.0 bits (214), Expect = 1.500e-15 Identity = 53/152 (34.87%), Postives = 75/152 (49.34%), Query Frame = 1 Query: 244 EAAVLSVINEYRREHGAPSLQWSATCAREAHKRANHRPVTASAADFGENLAR-STSLTWRDPTTACIGSLQRWQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYK---------GKSTVWVVAYFFPKGNQAGDFARNVLPL 669 + + L+ N+YR HGA W A+ A A A+ +A D+GENLA S +LT+ G++ W +E Y++A PG S T HFT VW + VG G++ G +VV + P GN G+FA+NVLPL Sbjct: 161 QQSALTSSNQYRALHGAQPFAWDASLATSAQAAADTCVFQHTAGDYGENLAAGSGALTYP-------GAIDLWYQEISQYNFANPGFSQDTGHFTQLVWAASNLVGCGINTQCTPQQLGFGSGFGTQATFVVCQYRPPGNFIGEFAQNVLPL 305
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Match: B3RZY8_TRIAD (SCP domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RZY8_TRIAD) HSP 1 Score: 81.3 bits (199), Expect = 7.200e-15 Identity = 51/141 (36.17%), Postives = 68/141 (48.23%), Query Frame = 1 Query: 268 NEYRREHGAPSLQWSATCAREAHKRANHRPVTASAAD----FGENLARSTSLTWRDPTTACIGSLQR-WQKEEEGYDYAKPGLSSSTDHFTNNVWKLTTHVGFGVSRALYKGKSTVWVVAYFFPKGNQAGDFARNVLPLGS 675 N RR HG P LQW A AN T S GENL + +P+TA + + W E YD++ P S+ HFT +WK TTH+G G S + V++VA++ P+GN G F +NVLP S Sbjct: 10 NRLRRIHGVPDLQWLTPLQISAEIWANQLIATGSMYPSDTVHGENLYHGD---FANPSTANVTQMVGIWYSEVANYDFSSPSFISAAKHFTQLIWKSTTHIGCGRSII----GNNVYLVAHYSPRGNFVGQFGQNVLPATS 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5800.14234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5800.14234.1 >prot_L-elsbetiae_contig5800.14234.1 ID=prot_L-elsbetiae_contig5800.14234.1|Name=mRNA_L-elsbetiae_contig5800.14234.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=342bp MLPEDTKLMMEDGDHVSVVSSMASYETPSEGSRSPTSRSRSPTSRCQTVNback to top mRNA from alignment at L-elsbetiae_contig5800:7254..9947- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5800.14234.1 ID=mRNA_L-elsbetiae_contig5800.14234.1|Name=mRNA_L-elsbetiae_contig5800.14234.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2694bp|location=Sequence derived from alignment at L-elsbetiae_contig5800:7254..9947- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5800:7254..9947- >mRNA_L-elsbetiae_contig5800.14234.1 ID=mRNA_L-elsbetiae_contig5800.14234.1|Name=mRNA_L-elsbetiae_contig5800.14234.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2052bp|location=Sequence derived from alignment at L-elsbetiae_contig5800:7254..9947- (Laminarionema elsbetiae ELsaHSoW15)back to top |