mRNA_L-elsbetiae_contig58.14227.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig58.14227.1
Unique NamemRNA_L-elsbetiae_contig58.14227.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: D7FLT1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT1_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 5.930e-125
Identity = 191/226 (84.51%), Postives = 202/226 (89.38%), Query Frame = 1 
Query:    1 MASLNPPIADDLSQLAVPRHAVIVGLSGGS--REVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAPVQATAPPRPYGDL 672
            MASLNPPIADDLSQLA+PRHAVIVG S GS  REVLLARRDGMH DLTVPTVGRFR TGDAFLTTDRVVFCA KPHGSQNGMLFKGFDIPL+ L GEKFEQPILFGANNLSG V+TNVAYAG  T     GFH TA+PVINSSWRLSFRNGGFGTFL AFY+AL+RRRS+ P+V+AV F GS+DEWASLQA EVAQAVALDPTDGTVLLTAAPV A+APPRPYGDL
Sbjct:    1 MASLNPPIADDLSQLALPRHAVIVGFSAGSGGREVLLARRDGMHLDLTVPTVGRFRTTGDAFLTTDRVVFCARKPHGSQNGMLFKGFDIPLQVLSGEKFEQPILFGANNLSGVVETNVAYAGSTTGATAPGFHATATPVINSSWRLSFRNGGFGTFLHAFYSALQRRRSVDPSVTAVTFAGSEDEWASLQATEVAQAVALDPTDGTVLLTAAPVAASAPPRPYGDL 226
[Close]
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: W4GK22_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK22_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.400e-16
Identity = 64/193 (33.16%), Postives = 96/193 (49.74%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTV-----QTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAPVQATAPPR 657
            E+ +  R G+ F  T  +  +F+A G  ++TT R+VFCA K   +Q+   F+ F+IPL+ +R +KF QPI FGA N+SG V     QTN               +   +P+    W++SF NGG GTFL  F   +E+++           G  D  + + Q     Q   +DP D +V+    PV+   PPR
Sbjct:   22 EMFILERPGVSFTCTTASGSKFKANGRIYITTQRLVFCADKGT-TQHDTFFEAFEIPLDNVRRDKFNQPI-FGACNISGDVFPATDQTN---------------YDDVTPI---HWKVSFNNGGTGTFLTVFLKLMEQKKK----------GDIDASFVAKQQ----QKAFVDPNDPSVIYVTQPVR---PPR 177
[Close]
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: A0A067BUS7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUS7_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 5.100e-15
Identity = 61/182 (33.52%), Postives = 91/182 (50.00%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAPVQ 639
            EV +  R  + F   V    +F+ATG  ++TT R+VFCA K   +Q+G  F+ F+IPL+ +  +KF QP +FG+ N+SG V       G             A+P+    WR+SF NGG GTFL  F   +E ++           G  D+ +A  Q     +   +DP D TV+  + PV+
Sbjct:   22 EVFILERPSIAFQCLVDG-HKFKATGRIYITTQRLVFCADKA-ATQHGRFFQAFEIPLDNIADDKFNQP-MFGSCNISGDVFPVGTDEGD-----------VATPI---EWRVSFPNGGTGTFLPIFLRLMEHKKHA---------GLVDEAFAEKQ-----RKAYVDPNDPTVIYVSQPVR 172
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BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: A0A485KAD1_9STRA (Aste57867_3395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAD1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.880e-15
Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTV----QTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAPVQATA 648
            E+ +  R  + F  T  +  +F+A G  ++T+ R+VFCA K   +QN M F+ F+IPL+ +  +KF QPI FGA N+SG V    QT+                V  +P+    W++SF NGG GTFL  F   +E+++  +           D+E+   Q     Q   +DP D +++    PV+  A
Sbjct:    8 EMFILERPDIAFSCTA-SGNKFKANGRMYITSQRLVFCADKG-STQNDMFFEAFEIPLDNVSRDKFNQPI-FGACNISGDVLPVHQTD---------------DVDVTPI---RWKVSFNNGGTGTFLAVFLKLMEQKKKEAEV---------DEEFIRKQ-----QKAFVDPNDPSIIYVTQPVRPRA 161
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BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: A0A6G0XH32_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH32_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.350e-14
Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGS-QNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTV-QTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAPVQATA 648
            E+ +  R G+ F     +  +F+  G  ++TT R+VFCA K  GS Q+ + F+ F+IPL+ +  +KF QPI FGA N+SG V   N A  G             ASP+    W+++F NGG GTFL  F   +E+++           G  D+ +   Q     Q   +DP D +++    PV+  A
Sbjct:   22 ELFILERPGIAFTCNA-SGNKFKGNGRIYITTQRLVFCADK--GSHQHDIFFEAFEIPLDNITADKFNQPI-FGACNISGNVVPVNQAADG------------GASPI---QWKVAFNNGGTGTFLAVFLKLIEQKKKA---------GEVDETFVQKQQ----QKAFVDPNDPSIIYVTQPVRPRA 176
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BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: A0A7S2S2S8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S2S8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.090e-14
Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 1 
Query:    7 SLNPPIADDLSQLAVPRHAVIVGLSGGSREVLLARRDGMHFDLTVPTVGRFRAT-GDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAAL-ERRRSISPAVSAV 525
            S+NP + ++ +  AV            S E+ L  R  ++F+L    + +  A+ G  FLTT R+VF A      ++G +F+ F+IPLE++  EKF QPI FG+NNL+GTV+  V   G  T               ++ ++L F  GG GTFL  F+ AL E RR    +++ V
Sbjct:    2 SMNPSMYNERTPFAV------------SGELFLVSRPSLYFELQAEGLPKVSASNGTVFLTTKRLVFVAEPAVKQRDGFMFQAFEIPLEKIADEKFNQPI-FGSNNLAGTVKP-VPGMGLNT---------------DAKYKLYFNAGGAGTFLPLFFRALIEARRPAQHSLAQV 147
[Close]
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: A0A067C3R3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C3R3_SAPPC)

HSP 1 Score: 80.5 bits (197), Expect = 7.960e-13
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAP 633
            EV +  R  + F   V    +F+A+G  ++TT R+VFCA K   +Q+G  F+ F+IPL+ +  +KF QP +FG+ N+SG V       G             A+P+    WR+SF NGG GTFL  F   +E ++           G  D+ +A  Q     +   +DP D TV+  + P
Sbjct:   22 EVFILERPSIAFQCLVDG-HKFKASGRIYITTQRLVFCADKA-ATQHGRFFQAFEIPLDNIADDKFNQP-MFGSCNISGDVFPVGTDEGD-----------VATPI---EWRVSFPNGGTGTFLPIFLRLMEHKKHA---------GLVDEAFAEKQ-----RKAYVDPNDPTVIYVSQP 170
[Close]
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: A0A1V9YZ54_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ54_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.890e-11
Identity = 57/180 (31.67%), Postives = 84/180 (46.67%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDPTDGTVLLTAAP 633
            EV +  R  + F   V    +F+  G  ++TT R+VFCA K    Q+G  F+ ++IPL+ +   KF QPI FG+ N++G V       G             A+P   + W+LSF NGG GTFL  F   +E  +           G  D+ +A  Q     +   +DP D TV+  + P
Sbjct:   22 EVFILERPAIAFQCIVDGE-KFKGNGRIYITTQRLVFCADKG-SDQHGRNFQAYEIPLDNITENKFNQPI-FGSCNITGDVIPVGTAEG-----------TVATP---NQWKLSFNNGGTGTFLPVFLRLMEHHKRA---------GEVDETFADKQ-----RKAYVDPNDPTVIYVSQP 170
[Close]
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: C5LD81_PERM5 (Arabinogalactan protein, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LD81_PERM5)

HSP 1 Score: 71.6 bits (174), Expect = 1.330e-10
Identity = 66/215 (30.70%), Postives = 98/215 (45.58%), Query Frame = 1 
Query:   10 LNPPIADDLSQLAVPRHAVIVGLSGGSREVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGGFGTFLRAFYAALERRRSISPAVSAVAFG-----GSDDEWASLQAAEVAQAVALDPTDGTVLLTAAPVQ 639
            +NP + +DL      R+ +       ++EV L RR+ + F    P+ G  RATGDA++T+ R+VF   K  GS +   F    + LE  R  KF QP+ FGAN L G     +  AG   +CR +                +F +GG GTFL  FY    R  ++S +    A G      +     S+ A ++      DP+D +V+  A P Q
Sbjct:    7 INPTLVEDLR--TKQRYPL-----AEAQEVFLLRRNNIVFSARGPSFGELRATGDAYMTSKRLVFVIGKD-GSGSRPDFYSASVALEAWRDPKFRQPV-FGANFLEGVSADPIPGAG---ECRFS---------------YTFNSGGCGTFLPMFY----RLHAMSSSAGGGAPGDRMRPANSSFVQSVLAGDLGAVGFQDPSDPSVIYVAQPPQ 190
[Close]
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Match: W4GJS0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJS0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.170e-10
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 1 
Query:   94 EVLLARRDGMHFDLTVPTVGRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQPILFGANNLSGTV 336
            E+ +  R G+ F  T  +  +F+A G  ++TT R+VFCA K   +Q+   F+ F+IPL+ +R +KF QPI FGA N+SG V
Sbjct:   22 EMFILERPGVSFTCTTASGSKFKANGRIYITTQRLVFCADKGT-TQHDTFFEAFEIPLDNVRRDKFNQPI-FGACNISGDV 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig58.14227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FLT1_ECTSI5.930e-12584.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W4GK22_9STRA1.400e-1633.16Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A067BUS7_SAPPC5.100e-1533.52Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KAD1_9STRA6.880e-1531.75Aste57867_3395 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0XH32_9STRA1.350e-1432.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2S2S8_9STRA7.090e-1434.29Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A067C3R3_SAPPC7.960e-1332.78Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9YZ54_9STRA1.890e-1131.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
C5LD81_PERM51.330e-1030.70Arabinogalactan protein, putative n=1 Tax=Perkinsu... [more]
W4GJS0_9STRA3.170e-1043.21Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig58contigL-elsbetiae_contig58:59156..64755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.4
Seed ortholog evalue2.9e-13
Seed eggNOG ortholog112098.XP_008617740.1
Preferred nameWBP2
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000785,GO:0000790,GO:0000976,GO:0000977,GO:0000978,GO:0000979,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001775,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005856,GO:0005929,GO:0006355,GO:0006357,GO:0006996,GO:0006997,GO:0007154,GO:0007165,GO:0007338,GO:0007343,GO:0008104,GO:0008134,GO:0008150,GO:0009566,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0014070,GO:0016043,GO:0019219,GO:0019222,GO:0019904,GO:0019953,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030331,GO:0030518,GO:0030522,GO:0031056,GO:0031058,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031490,GO:0031514,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032570,GO:0032870,GO:0033011,GO:0033036,GO:0033043,GO:0033044,GO:0033143,GO:0033145,GO:0033146,GO:0033148,GO:0033993,GO:0035038,GO:0035039,GO:0035065,GO:0035066,GO:0035257,GO:0035258,GO:0036126,GO:0040008,GO:0040029,GO:0042221,GO:0042493,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043565,GO:0043627,GO:0044085,GO:0044212,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045184,GO:0045570,GO:0045572,GO:0045815,GO:0045893,GO:0045927,GO:0045935,GO:0045944,GO:0046620,GO:0046622,GO:0048471,GO:0048518,GO:0048522,GO:0048545,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0050699,GO:0050789,GO:0050793,GO:0050794,GO:0050847,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051427,GO:0051704,GO:0051716,GO:0060255,GO:0061827,GO:0065007,GO:0070013,GO:0070887,GO:0070925,GO:0071310,GO:0071383,GO:0071391,GO:0071396,GO:0071407,GO:0071440,GO:0071442,GO:0071495,GO:0071840,GO:0080090,GO:0097159,GO:0097223,GO:0097729,GO:0120025,GO:0140110,GO:1901363,GO:1901654,GO:1901700,GO:1901983,GO:1901985,GO:1902275,GO:1902680,GO:1903506,GO:1903508,GO:1905269,GO:1990837,GO:2000026,GO:2000112,GO:2000756,GO:2000758,GO:2001141,GO:2001252
EggNOG free text desc.female pronucleus assembly
EggNOG OGsKOG3294@1,KOG3294@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_001370.1
Exons6
Model size2066
Cds size675
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.9067147-CDS-L-elsbetiae_contig58:59155..592871622816622.9067147-CDS-L-elsbetiae_contig58:59155..59287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 59156..59287 +
1691683692.2287133-CDS-L-elsbetiae_contig58:59155..592871691683692.2287133-CDS-L-elsbetiae_contig58:59155..59287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 59156..59287 +
1622816622.9260497-CDS-L-elsbetiae_contig58:60377..604801622816622.9260497-CDS-L-elsbetiae_contig58:60377..60480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 60378..60480 +
1691683692.240935-CDS-L-elsbetiae_contig58:60377..604801691683692.240935-CDS-L-elsbetiae_contig58:60377..60480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 60378..60480 +
1622816622.9390392-CDS-L-elsbetiae_contig58:60885..610311622816622.9390392-CDS-L-elsbetiae_contig58:60885..61031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 60886..61031 +
1691683692.251266-CDS-L-elsbetiae_contig58:60885..610311691683692.251266-CDS-L-elsbetiae_contig58:60885..61031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 60886..61031 +
1622816622.9498043-CDS-L-elsbetiae_contig58:61396..614551622816622.9498043-CDS-L-elsbetiae_contig58:61396..61455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 61397..61455 +
1691683692.2667994-CDS-L-elsbetiae_contig58:61396..614551691683692.2667994-CDS-L-elsbetiae_contig58:61396..61455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 61397..61455 +
1622816622.9626453-CDS-L-elsbetiae_contig58:62472..625961622816622.9626453-CDS-L-elsbetiae_contig58:62472..62596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 62473..62596 +
1691683692.2788482-CDS-L-elsbetiae_contig58:62472..625961691683692.2788482-CDS-L-elsbetiae_contig58:62472..62596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 62473..62596 +
1622816622.9748297-CDS-L-elsbetiae_contig58:63253..633641622816622.9748297-CDS-L-elsbetiae_contig58:63253..63364Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 63254..63364 +
1691683692.2881753-CDS-L-elsbetiae_contig58:63253..633641691683692.2881753-CDS-L-elsbetiae_contig58:63253..63364Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 63254..63364 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.9887412-UTR-L-elsbetiae_contig58:63364..647551622816622.9887412-UTR-L-elsbetiae_contig58:63364..64755Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig58 63365..64755 +
1691683692.297837-UTR-L-elsbetiae_contig58:63364..647551691683692.297837-UTR-L-elsbetiae_contig58:63364..64755Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig58 63365..64755 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig58.14227.1prot_L-elsbetiae_contig58.14227.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig58 59156..63364 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig58.14227.1

>prot_L-elsbetiae_contig58.14227.1 ID=prot_L-elsbetiae_contig58.14227.1|Name=mRNA_L-elsbetiae_contig58.14227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MASLNPPIADDLSQLAVPRHAVIVGLSGGSREVLLARRDGMHFDLTVPTV
GRFRATGDAFLTTDRVVFCASKPHGSQNGMLFKGFDIPLEELRGEKFEQP
ILFGANNLSGTVQTNVAYAGCFTKCRLAGFHVTASPVINSSWRLSFRNGG
FGTFLRAFYAALERRRSISPAVSAVAFGGSDDEWASLQAAEVAQAVALDP
TDGTVLLTAAPVQATAPPRPYGDL*
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mRNA from alignment at L-elsbetiae_contig58:59156..64755+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig58.14227.1 ID=mRNA_L-elsbetiae_contig58.14227.1|Name=mRNA_L-elsbetiae_contig58.14227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5600bp|location=Sequence derived from alignment at L-elsbetiae_contig58:59156..64755+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTCGCTGAACCCTCCCATCGCTGATGACCTGTCCCAGCTAGCAGT
TCCGAGGCATGCGGTGATCGTGGGTCTGTCTGGCGGGAGCCGCGAGGTAT
TGCTGGCGCGCCGCGATGGGATGCATTTCGACGTGAGAGATTTGGACTAG
ACTGACTCTGTGACTGCTGTATTGTAGTCTACGGCTTGGCTCCGCCTTGT
ACGACCTGCTCTCCCCCAGGCTATACGAGTGCAGACTCGTTGTCGTATAG
AGGGTGCTGAAAATATGCTGAGCTAGCGGCTCTGTTGTTTGTAAGCGCTG
AACGTGTGATGTTGGTGTGTTTCAAGGCAGAAGTTGATGTTGACGTCTAG
TCTATTCCTCCGCAAGCTGTAGACAGGTAACTTTGCCGGATTGACTCTCT
GCCTCTGTTCACACCGACAAACTAGTAATCGCTGCTGTTCAGTTGAATCA
TAACGTGCCACGGCGGCAATACATGTGTATTAAACGTACATATGTATCTA
CAGAGTATCATACATCGAAAAAACTTTGCTCTCCGAACACGTGTTCAAAT
TGAGAGACCTCCGGTCACGCTCCCCTCGGTGGTGGACGCGACACCTACCC
GCGTGCCATGTGTGTAGTGCCTCTGTACAGGGTATGAAATGTACCCCTTT
TCGACCAAGAGTACCAGACAGAGGTTTCCCCTACGATTGCTTTGAACTGG
AGACTTCCGCGTATGGGTAAATGTGTGAATAAGTAGTAGCGTTCGCTGCT
GATGATCTTGGTCGCGGGAGGCAACTACTGCTGTATGTGCATTATTCATT
ATTCATGCATCCCATATCGACACATTCTCCATTGAACACCGTTGACTTAC
CACCGAGGTGCTTAACGTTCATAGTGGTGTACTTCTTCTGACTGGATGGA
GTTATCGGTAGGCCTCACCACCTCACGTCGCTAGAGCTCACAGCAGTTTA
GGCGCGCTCTATCCGAAGTCCGAAGTCTTCTGCTCGGTGCAAGCACTCTC
TCCACCGTCCCCTCGAAGCGGGAGTTCACAGTGTAGGAAGCATGAGCACT
TCGGTCCTGGATCCGATCATCATCTTGGCATTTTTCCGCCGGTAGAGCAA
TCGGCAAGAAAGCACGGTTTAGACGACGAGAATATGGGATCACACAAAAC
GCAAGCCCGTCTCTCCTTCTCGGTTGATCCTCCGTTCCACCCCCGCCTGT
CGCGATTTGACCTCTGTGCCAGTTAACCGTGCCGACCGTGGGACGCTTCC
GAGCAACCGGAGACGCCTTCCTCACGACGGACAGGGTTGTGTTCTGCGCC
AGTAAGCCGCACGGGTCGCAGAACGGTGAGCATGAAGGAGGCGTTATTTT
AGCGTGCAGGAGTAGTACACAAAAACCGCGTCATTCGTTCGATGTAGGCA
GCTAGCTATTTGGCTGCTTTAGACTGCCGCTTATAGTCGATGCGGTAATT
TAGGCTATTTATTTACAGAAAAGCACCAAGGGCCTGTGGGGGGAAGCTTA
CATCTCAATTCCTCCAACAGACCCGCGAATCCCCACAGCAGTAGTAGTCA
GTATCATGCGGTTGTACGATTGCTGTCGTTGTCGATGGAGGTGTGATATT
TAGTCCCCGCTCGGTCCGCCGCCCGACCATTGTGTCCGCCGTTGGGACAG
TGATGCGTTTCCTCCTTTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TACTTCCATCGCCCTCATGGAATCGGGCAGGTATGCTCTTCAAGGGGTTT
GATATCCCCCTTGAGGAGCTGAGGGGCGAGAAGTTCGAGCAGCCCATCCT
CTTCGGCGCGAACAACCTCTCCGGGACCGTCCAGACGAACGTCGCCTATG
CAGGTTGTTTTACCAAGTGTCGATTGGTTGATTGATTGGTTGTTGTACAA
TATCTCACACCCTGGAGATTTAGGTAGATTTGTCATCGTTGAAGACTTGT
CATAGAAAAGAGAATGTTTCCCTTGTTTGATGTACGAGAGGTTCAACCGT
AGTTATGGGTGTTCAAATATTTTAGAAACTTCCGTTTATTGAGTTTCGCC
ATCCGCCCTCTGGGTCTACAGCGTGTTCAAAGCCCACTCATGTGATTTTA
TCAGCTCGCACGCAAAACGGCGACTGTTTTTGTTTTTTACGATGTGGCTG
TCCCGTTCATCGCTCCTTCGACGCTCGTTCTGGTGGCGTTTTTTTTTCTG
CAGGCAGCTTGGGGGAGACGCCGGCGGCGGTGGCGGCGGAGGCAGGTTTC
CACGTCACGGCTTCACCAGTCATCAACTCTAGCTGGCGGTTATCCTTCAG
GTACGGCAAGCTGCCTCTGTTTTCCCGTCGTGTAACTCGATGCAGCAGGC
GATGTGTTTTCCCCTGGAGCAAGCTCATATTTTCGCCCCGACACGGAGTC
TAATTTTTGACGGGGGGGGCCCTCTTGCGTTCTCGTGAAGAGCTCATCTG
GCCGGCGATTCCTTCTCCGTTTTTAAGCTGGACACGCTTGTTCGGGATGA
AGAGGATGGGTGGGCGAATGTGTGGATGTATCAATGGTGCCTCACCTTGC
TTAGTGGAGTGCTCAGGGAGGGGGGTCCCGCGACAGCACATTTTGTGCAC
GAGCGGGTGGTATGTACGTACCTGCCTTATTTCCAGCGGTGGGCGGTTGG
ACGTTTGGCGACCCCTTTTGATTGTGACCGGAGGGGGAGCAACAGAAGAA
AGTCGAACCTTTCTGCCCCCAACTCACTTACCGTAGGTGACACAAGATAC
CACACCCCCTGGACCGAATTTTAGAGCTCGATTACTCCGTAACGAAGAAG
GTGCCAGCACCAAACGACACATATTCGGACAGCCCTTGACTAAATATTTC
CAACGCCACCCCTTTTTGGCACTGGCACTCTTCTTGCAGGGGAGGAATCG
AGCTTTGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTA
TGCCGGGCTCGGCTTTCGGAGCGGTGACCTGGGTGTTTTTTCTGCGGGTG
GGCTTTTGACGATGAATAAATTTGTGCTCTCGTTGTCGCGGTTTTCGGTA
CCAGGGGGAGTCATGCGAAACGTGGGATGTGATTTGGGCCGCACAACAGT
TTGTGAGTTTTGTTGGTTGCTGCATCGCACCACGCTGCTTGTGACGATGA
GCGGTCGGCCAGTTGAAAATCTCAATGCCTTATCGACGTTTTTTTTCTGC
GTGCAAGTCTCGATACCCATTGTGCGCACTCAAATCGCGTACACGCGGCA
TGCCCACATCTGTTGGGGGGGGTGTCTCTCTTGCTTTGCTTGCCTCGATG
GAAAAATATGTGTACAGAAACGGCGGCTTTGGCACCTTCTTGCGAGCCTT
CTACGCTGCTCTCGAGCGGCGGCGATCGATCAGCCCGGCGGTTTCGGCGG
TGGCTTTCGGAGGCAGTGACGACGAATGGGCTTCCCTGCAGGTAGATGCG
GCGGTGTTGATGCAAATGTGTTTGCTCCTCCCATCTTTTCTGAATGCCAG
TCGAAATAAACGCAATGGACGAAAAAACAAGATCGACGCTTTTCGGAACG
TGTTTTGACGTTTGTAGTTCAGTATCAACCGGGATGAGAGGAAGGCCTCA
AAGGAGATATATTTCCCTTGTCTCCCGCCGTTATTTTCTTGTAGAGTGAG
TGCTGTTGCACTCCTGCCCGACGACATTTTCCGACGCTGAATCGACGGCT
GGGCTGCTTCCGACAGCAGTGTCCCAACTCCTGGAACCCCGGCCCCGATT
TCTTTCCGATTTAATTCCCCCGACACTCTTTTTTTTGTAATGCTTATTTT
TCGATATCTTTAGCAATTATTTATAAGAGGTCGCTTAGTCATAATAGCCA
CTTTCTCTAGAATTGGAATCAGGTCTTGTCGAACTAAAGTAATTTTTTTG
TTTGTAATCAAAATAAAAGGATTTTCATATATATTCAGCCTCCCTTTTTA
CAGGGGTTGTTGCACCGCTCACACGTCGGCGGGGTAATTACAGATAGTAG
TAAATAGGTGAAAAACGCCTTAATAGTTGCGCTTTGGGGTTTGTCGGAAA
CTTGAAACTTCACTTCCCCGTCGTCGTTTGGGGTGACGCAACCAACAGGC
CGCGGAGGTGGCGCAGGCGGTGGCACTAGACCCCACGGATGGGACGGTGC
TGCTAACCGCCGCTCCTGTCCAGGCTACTGCCCCGCCCAGGCCGTACGGC
GACTTGTGAGCACCGACCGAGCCGCTGCCGCTGCCGCTGCCGCCGCCGCT
TGCTCCTTGGTCATCGACCTGTCGGAAGATTTATCGCGCTCGAAAGCGGT
GCTGCGTCATCGAACAAAGTGTGTTCGACGGCTGGCTGCTAGTTCCCCTG
TCCTGTCCTGAAGGCAGCGAGCAGTTGAGCAGCACATCAACGAAGCAACG
CTCCTGATTGCAAAGGTTTTGAGGCAGGTCGAGGCGAAGAGGCAGGCAAC
GGCGGCGATGGCGGCGGTTGAGCCCGCGGTGTTGCTAGAACCAAGACGAT
AGGTTGTGCTTGCACCTCGGCATGAGCTGCTCGACGGCGGTCCCCCCGCG
TCTTCCCGCTCAACATGGTGGTTGGGGCTTGCTTCTATTGTCTGTCCTGG
AAGATAGCACACGGTTGAACACGAACACGTCTCAATGAAGCAACAATCCT
GAGTGCGAGGGCGCCGCGGCAGGCCGAGGACGAAGAGGCAGGCAGCATCG
GCGGCGGTGGCGGCGGCGGCGCTAATTGTGTCCGCGGCTTTGGCAACGGT
AACACAGTAGCAGCAGTTGCACAGCAGTAGCACCGCTGTAGTATTGTGGC
CACGACGGTATATCTACGTTTCAAGTGGACGTTCCGGCGTGTAATTAAAT
CAGCAGTCTCGCCCTGCAAAACCACAATCGAAATAATACCCCTCTTAGAG
TTGACGGCAATAATCGAAGTAGATAGCAGGTGGGGGTCATCAGGGAGGCT
GTGAACATGCATGTGGAGAAATGAAAGATGTCGTTGCAGAGTCAGGGATA
AGGTTAGTTCGGCACACGTTGGCACTCGAGAGGAGCAGAGGTGCTCACGT
GGAACCCACCCCCTTCCGCCCATGTTGGGCGAAGAAGCACGGCAGGGTGT
TGACCGACATGGGACGGCGTCTCGCCCAAATGTTTCACTCCTGCCATGAC
GGCTGGAATCGTTCAACATCGAACCTAAAGTTTCCAGATTTATGTATGTA
CAGGCACCACACCATCGCACGGAGGGACGGAATCGTTAGGCATCAAACTT
TTCAGGTGTAAATTATCCACGCCATAGCCGTGGCGGCGGCTCCCTTGGAC
AAATATTTGCAGAAGGCATGATGGCATAAAAGGACGGCGACGACTTGTTT
GTTGCGTTTTCGGTCCGTTCGGGGATGGATGGGAGGAGGCCAGGAATACA
TCTGATGTCGTAAATTAGCAGCTTATGCGAGCAATCTCTTGGTGCTTACA
CCACGTACCACCGTCGCCTGCGCTGCCACTTCAACTGATTTTCCTCCGTG
CACGGAGGAACAAACATCAATCTACGAAAGAAAACGGCCGGACCAAATAT
TACATCACTGCTGGGTAGGTATGAAAGTGTTAAATTCACCACGGAGCCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig58:59156..64755+

>mRNA_L-elsbetiae_contig58.14227.1 ID=mRNA_L-elsbetiae_contig58.14227.1|Name=mRNA_L-elsbetiae_contig58.14227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig58:59156..64755+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTCGCTGAACCCTCCCATCGCTGATGACCTGTCCCAGCTAGCAGT
TCCGAGGCATGCGGTGATCGTGGGTCTGTCTGGCGGGAGCCGCGAGGTAT
TGCTGGCGCGCCGCGATGGGATGCATTTCGACATGGCCTCGCTGAACCCT
CCCATCGCTGATGACCTGTCCCAGCTAGCAGTTCCGAGGCATGCGGTGAT
CGTGGGTCTGTCTGGCGGGAGCCGCGAGGTATTGCTGGCGCGCCGCGATG
GGATGCATTTCGACTTAACCGTGCCGACCGTGGGACGCTTCCGAGCAACC
GGAGACGCCTTCCTCACGACGGACAGGGTTGTGTTCTGCGCCAGTAAGCC
GCACGGGTCGCAGAACGTTAACCGTGCCGACCGTGGGACGCTTCCGAGCA
ACCGGAGACGCCTTCCTCACGACGGACAGGGTTGTGTTCTGCGCCAGTAA
GCCGCACGGGTCGCAGAACGGTATGCTCTTCAAGGGGTTTGATATCCCCC
TTGAGGAGCTGAGGGGCGAGAAGTTCGAGCAGCCCATCCTCTTCGGCGCG
AACAACCTCTCCGGGACCGTCCAGACGAACGTCGCCTATGCAGGTTGTTT
TACCAAGTGTCGATTGGTATGCTCTTCAAGGGGTTTGATATCCCCCTTGA
GGAGCTGAGGGGCGAGAAGTTCGAGCAGCCCATCCTCTTCGGCGCGAACA
ACCTCTCCGGGACCGTCCAGACGAACGTCGCCTATGCAGGTTGTTTTACC
AAGTGTCGATTGGCAGGTTTCCACGTCACGGCTTCACCAGTCATCAACTC
TAGCTGGCGGTTATCCTTCAGGCAGGTTTCCACGTCACGGCTTCACCAGT
CATCAACTCTAGCTGGCGGTTATCCTTCAGAAACGGCGGCTTTGGCACCT
TCTTGCGAGCCTTCTACGCTGCTCTCGAGCGGCGGCGATCGATCAGCCCG
GCGGTTTCGGCGGTGGCTTTCGGAGGCAGTGACGACGAATGGGCTTCCCT
GCAGAAACGGCGGCTTTGGCACCTTCTTGCGAGCCTTCTACGCTGCTCTC
GAGCGGCGGCGATCGATCAGCCCGGCGGTTTCGGCGGTGGCTTTCGGAGG
CAGTGACGACGAATGGGCTTCCCTGCAGGCCGCGGAGGTGGCGCAGGCGG
TGGCACTAGACCCCACGGATGGGACGGTGCTGCTAACCGCCGCTCCTGTC
CAGGCTACTGCCCCGCCCAGGCCGTACGGCGACTTGTGAGCCGCGGAGGT
GGCGCAGGCGGTGGCACTAGACCCCACGGATGGGACGGTGCTGCTAACCG
CCGCTCCTGTCCAGGCTACTGCCCCGCCCAGGCCGTACGGCGACTTGTGA
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