mRNA_L-elsbetiae_contig58.14225.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig58.14225.1
Unique NamemRNA_L-elsbetiae_contig58.14225.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: D7G6Q9_ECTSI (Obg-like ATPase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q9_ECTSI)

HSP 1 Score: 728 bits (1880), Expect = 5.150e-261
Identity = 382/419 (91.17%), Postives = 401/419 (95.70%), Query Frame = 1
Query:    1 MLMRCMAGTVLLAGARTLAFRPPSTIWGVRVAGQAAATRRQAGWTTRAISSTPTMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNVSK 1257
            MLMRCMAGTVLLAGARTLAFRPPSTIWGV+VAGQAA  RRQ G   R   S+ TMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRL VLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFED DIIHVEGSVDPVRDIDIINIELALADM+QVEKRLQK ++DKK + +EK+GLAKLLK LEEG+PVRTV+LT++E KDTAYLGLLTAKKVIYACNVAD+DLADGNAMVDGVRKFAE+EGARVV+VSAQVESELVDLDG+DK+EFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIY+GWTAP+AAGVIHSDFERGFIRAEAIKYEDLV CGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNVSK
Sbjct:    1 MLMRCMAGTVLLAGARTLAFRPPSTIWGVKVAGQAAM-RRQVGSPVR---SSSTMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLKVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDPDIIHVEGSVDPVRDIDIINIELALADMAQVEKRLQKVAKDKKATASEKTGLAKLLKVLEEGKPVRTVELTEEEAKDTAYLGLLTAKKVIYACNVADSDLADGNAMVDGVRKFAEEEGARVVIVSAQVESELVDLDGEDKQEFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYAGWTAPKAAGVIHSDFERGFIRAEAIKYEDLVNCGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNVSK 415          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A835ZA16_9STRA (Obg-like ATPase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA16_9STRA)

HSP 1 Score: 530 bits (1365), Expect = 7.950e-183
Identity = 274/371 (73.85%), Postives = 315/371 (84.91%), Query Frame = 1
Query:  139 RAISSTPTMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            R   +T +MKLKTGIVGMPNVGKSTLFNA+TE Q A   NYPF TIEPN+GVV VPD RL +L  INKS K +P++L+F DIAGLVKGASKGEGLGN+FLANIRECDAIVHVVRCFEDSDIIHV+G+VDPVRDI+ IN+ELALAD++QVEKRLQ+ +RDK V  AEK+ L KL+KAL+ GQ  R++ L ++E      L LLT K++IYA NV DTDLADGNA VD VRKFAE+EG+RVV+VSAQVESELV+L G D+ EFL SLGV+E +CGL ALVKEAY  LGL+TYFTSGETET+AWTI +GW APQAAGVIHSDFERGFIRAE I Y DLVECGSEKAA+EKG++RSEGKEYVVQEGDV+ FRFNV
Sbjct:   43 RGFRATASMKLKTGIVGMPNVGKSTLFNALTEQQAAQAENYPFCTIEPNVGVVAVPDPRLDILGTINKSQKVIPTSLEFVDIAGLVKGASKGEGLGNKFLANIRECDAIVHVVRCFEDSDIIHVDGNVDPVRDIETINLELALADLAQVEKRLQRLARDKNVVPAEKTALEKLVKALDAGQAARSIALDEEEAAAVRGLMLLTQKQMIYAANVPDTDLADGNAFVDAVRKFAEEEGSRVVLVSAQVESELVELSGADRAEFLGSLGVAEGSCGLPALVKEAYELLGLRTYFTSGETETRAWTIQTGWRAPQAAGVIHSDFERGFIRAETIAYGDLVECGSEKAAREKGVMRSEGKEYVVQEGDVMLFRFNV 413          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7S1BGY0_9STRA (Obg-like ATPase 1 n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGY0_9STRA)

HSP 1 Score: 490 bits (1262), Expect = 4.190e-167
Identity = 249/364 (68.41%), Postives = 301/364 (82.69%), Query Frame = 1
Query:  163 MKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRD-KKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            M LKT IVG+PNVGKSTLFNA+TE QGA  ANYPF TIEPN+G+VEVPD RL VL +IN+SVK +PSTL+F DIAGLVKGA+ GEGLGN+FL NIR+CDAIVHVVRCF+D ++IHV+GSVDPVRD ++IN+ELALAD++Q EKRLQK  +D KK S+ EK  L K++  LE  QP R  +L ++E  +   LGLLT KK+IYA NVAD DLA+GN MV+ +++ A+ EGA VV+VSAQVE+ELV+L+ DD+ +FLESLGV+ E CGLR LV EAY  L LQTYFTSG TET+AWTI +GW APQAAGVIH+DFE+GFIRAE + Y+DLV+CG E+ AK KGLLRSEGK+YVVQEGDV+ FRFNV
Sbjct:   58 MGLKTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVEVPDPRLEVLKKINESVKVIPSTLEFVDIAGLVKGAASGEGLGNKFLGNIRQCDAIVHVVRCFDDENVIHVDGSVDPVRDAEVINLELALADLAQAEKRLQKVVKDRKKDSDTEKRALEKVIAVLEADQPARNAELDEEEELEIKGLGLLTRKKMIYAANVADGDLAEGNEMVERLKETADKEGAAVVLVSAQVEAELVELEADDRNDFLESLGVTLEGCGLRKLVSEAYDILNLQTYFTSGPTETRAWTIGTGWKAPQAAGVIHTDFEKGFIRAETMSYQDLVDCGDEQTAKSKGLLRSEGKDYVVQEGDVILFRFNV 421          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: B7G217_PHATC (Obg-like ATPase 1 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G217_PHATC)

HSP 1 Score: 487 bits (1253), Expect = 1.240e-166
Identity = 244/363 (67.22%), Postives = 296/363 (81.54%), Query Frame = 1
Query:  163 MKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            MKL+T IVG+PNVGKSTLFNA+TE QGA  ANYPF TIEPN+G+V VPD +L +L +INKSVK VP+ L+F D+AGL+KGAS GEGLGNQFLA+IR+CDA+VHVVRCFED D++HV+GS+DPVRD ++IN+ELALAD+SQVEKRL++  +D+  S  EKS L K+   L + QP R V L ++E      LGLLTAKK++YA NV D DLA+GN MVD +R+ AE EGA++VVVSAQVE+ELV+L   D+ +FLESLGV  E  GLR LV+EAY  LGLQTY+TSG TET+AWTI  GWTAP+AAGVIH+DFERGFIRAE + Y+DLV CGSE  AK KG LRSEGK+Y+VQEGDV+ FRFNV
Sbjct:    1 MKLQTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVSVPDPKLEILKDINKSVKVVPAALEFVDVAGLIKGASTGEGLGNQFLASIRQCDAVVHVVRCFEDEDVVHVDGSIDPVRDAELINLELALADLSQVEKRLERVRKDRNASPVEKSALEKVAAVLLKDQPARNVVLDEEEENAIKSLGLLTAKKMVYAANVGDADLANGNEMVDRLRETAEKEGAKLVVVSAQVEAELVELSVGDRTDFLESLGVKLEDTGLRKLVREAYDILGLQTYYTSGPTETRAWTIRKGWTAPKAAGVIHNDFERGFIRAETVSYDDLVACGSEIEAKNKGKLRSEGKDYIVQEGDVILFRFNV 363          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7R9UJV0_DIALT (Obg-like ATPase 1 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UJV0_DIALT)

HSP 1 Score: 488 bits (1256), Expect = 1.930e-166
Identity = 255/370 (68.92%), Postives = 303/370 (81.89%), Query Frame = 1
Query:  148 SSTPTMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTV--DLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            +S  TMKL+TGIVGMPNVGKSTLFNA+TE QGA  ANYPF TIEPN GVVEVPD RL VLAEINKSVK VP++L+F DIAGLVKGAS GEGLGNQFLANIRECDAI HVVRCF+D ++IHV+GSVDPVRD D+IN+EL LAD++QVEKRL++ ++DKK    EK+ LAK+ + L  G+P R++  DL+ +E      L LLTAKK+IYA NV D+D+A+GN +V  +   A+ EGA VVVVSAQVE+EL+DL  +++ EFLESLGVS + CGLR LV+ AY  LGL+TYFTSG TET+AWTI  GWTAPQAAGVIH DFERGFIRAE I Y+DLV+ GSEK A++ G+LRSEGKEYVV EGDV+ FRFNV
Sbjct:   36 ASRVTMKLRTGIVGMPNVGKSTLFNALTETQGAEAANYPFCTIEPNTGVVEVPDPRLKVLAEINKSVKVVPASLEFVDIAGLVKGASTGEGLGNQFLANIRECDAITHVVRCFDDPNVIHVDGSVDPVRDADVINLELVLADLAQVEKRLERCAKDKKTDPTEKAALAKVKEVLNLGKPARSLLPDLSVEERVWLDRLQLLTAKKMIYAANVPDSDMANGNELVRKLDVLAKKEGASVVVVSAQVEAELIDLSPEERAEFLESLGVSLDDCGLRRLVRAAYDLLGLRTYFTSGPTETRAWTIQQGWTAPQAAGVIHGDFERGFIRAETIGYDDLVKAGSEKGARDAGVLRSEGKEYVVNEGDVMLFRFNV 405          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7S2E966_9STRA (Obg-like ATPase 1 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E966_9STRA)

HSP 1 Score: 488 bits (1257), Expect = 1.940e-166
Identity = 253/376 (67.29%), Postives = 302/376 (80.32%), Query Frame = 1
Query:  127 GWTTRAISSTP-TMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            G + R+ SST  +MKL+T IVG+PNVGKSTLFNA+TE QGA  ANYPF TIEPN+G+VEVPD +L+VL +IN S K VP+TL+F D+AGLVKGAS GEGLGNQFL+ IR+CDAIVHVVRCFED ++IHV+GSVDPVRD ++IN+ELALAD++QVEKRL +  +D+K   AE   L K+   L   +P R   L DDE      LGLLT KK+IYA NVAD DLA+GN M   +++ A+ EGA +V+VSAQVE+ELV+L+ +DK +FLE+LGVS E CGLRALV+EAY  L LQTY+TSG TET+AWTI  GWTAP+AAGVIH DFERGFIRAE I Y+DLVECGSE A K KGLLRSEGKEYVVQEGDV+ FRFNV
Sbjct:   40 GSSMRSYSSTKLSMKLQTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVEVPDAKLAVLEKINNSAKVVPATLEFVDVAGLVKGASAGEGLGNQFLSTIRQCDAIVHVVRCFEDENVIHVDGSVDPVRDAELINLELALADLAQVEKRLLRVKKDRKADPAEAKALEKVAAVLNNDEPARNAVLEDDEELAIKSLGLLTRKKMIYAANVADGDLAEGNDMSRRLKEHADKEGANLVLVSAQVEAELVELEDEDKLDFLEALGVSLENCGLRALVREAYDILALQTYYTSGPTETRAWTIGKGWTAPKAAGVIHGDFERGFIRAETITYDDLVECGSESAVKAKGLLRSEGKEYVVQEGDVILFRFNV 415          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7S1VBU5_9STRA (Obg-like ATPase 1 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VBU5_9STRA)

HSP 1 Score: 489 bits (1258), Expect = 3.060e-166
Identity = 249/363 (68.60%), Postives = 299/363 (82.37%), Query Frame = 1
Query:  163 MKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            MKL+T IVG+PNVGKSTLFNA+TE+QGA  ANYPF TIEPN+G V VPD +L VL +IN+SVKTVP+TL+F D+AGLVKGAS GEGLGNQFLA IR+CDAI HVVRCFED ++IHV+G+VDP+RD ++IN+ELALAD++ VEKRLQ+  +DKK  + E S L K+   LE+ +P RT  LT+DE      LGLLT KK+IYA NVAD DLA+GN MV+ +R+ A+ EGA++V+VSAQVE+ELV+LD ++K EFLESLGV+ E CGLRALV+EAY  L LQT++TSG TET+AWTI  GW APQAAGVIH+DFERGFIRAE I YEDLVE GSE   K +G LRSEGKEYVVQEGDV+ FRFNV
Sbjct:   76 MKLQTAIVGLPNVGKSTLFNALTESQGAEAANYPFCTIEPNVGTVCVPDPKLPVLEKINESVKTVPATLEFVDVAGLVKGASDGEGLGNQFLATIRQCDAITHVVRCFEDENVIHVDGTVDPIRDAELINLELALADLASVEKRLQRVKKDKKAPKEEASALEKVFAVLEQDKPARTAQLTEDEELSLKGLGLLTRKKMIYAANVADADLAEGNEMVNRLRELADKEGAKLVIVSAQVEAELVELDTEEKEEFLESLGVNLEDCGLRALVREAYDLLKLQTFYTSGPTETRAWTIRQGWKAPQAAGVIHNDFERGFIRAETISYEDLVEHGSELECKAQGKLRSEGKEYVVQEGDVILFRFNV 438          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7S2WIQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WIQ3_9STRA)

HSP 1 Score: 486 bits (1251), Expect = 1.460e-165
Identity = 245/370 (66.22%), Postives = 303/370 (81.89%), Query Frame = 1
Query:  139 RAISSTP-TMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRF 1245
            RA SST  TMK++T IVG+PNVGKSTLFNA+TE QGA  ANYPF TIEPN+G+VEVPD +L+VL +IN+SVK VP+TL+F D+AGLVKGAS GEGLGNQFLA IR+CDAIVHVVRCFED ++IHV+GSVDPVRD ++IN+ELA AD++QVEKRL +  +D+K    E+S L K+   L + +P R  +L ++E      LGLLT KK+IYA NVAD+DLADGN MV+ +R  A+ EGA++ +VSAQVE+ELV+L+ +D+ EFLE+LGVS + CGLRALV++AY  L LQTY+TSG TET+AWTI  GWTAP+AAGVIH+DFERGFI+AE I Y DLV+ GSEK AKEKG +RSEGK+YVV EGDV+ FRF
Sbjct:   44 RAYSSTSLTMKIQTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVEVPDPKLAVLCDINESVKVVPTTLEFVDVAGLVKGASDGEGLGNQFLATIRQCDAIVHVVRCFEDENVIHVDGSVDPVRDAELINLELAFADLAQVEKRLARVKKDRKSEAGEQSALEKVAAVLNKDEPARNAELDEEEELSIKSLGLLTRKKMIYAANVADSDLADGNEMVERLRAVADSEGAKIAIVSAQVEAELVELEQEDRDEFLEALGVSMDDCGLRALVRDAYDILQLQTYYTSGPTETRAWTINKGWTAPKAAGVIHNDFERGFIKAETISYNDLVDAGSEKVAKEKGFMRSEGKDYVVAEGDVILFRF 413          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7S4JBD1_9STRA (Obg-like ATPase 1 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JBD1_9STRA)

HSP 1 Score: 486 bits (1251), Expect = 1.620e-165
Identity = 249/376 (66.22%), Postives = 301/376 (80.05%), Query Frame = 1
Query:  127 GWTTRAISSTP-TMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            G  TR+ S T   MKL+T IVG+PNVGKSTLFNA+TE QGA  ANYPF TIEPN+G+VEVPD +LSVL +IN S K VP+TL+F D+AGLVKGAS GEGLGNQFLA IR+CDAIVHVVRCFED ++IHV+GSVDPVRD ++IN+ELALAD++QVEKRLQ+  +D+K    E   L K+   L   +P R  +L +DE      LGLLT KK+IYA NVAD+DLA+GN +V+ ++  AE EGA +V+VSAQVE+ELV+L+ DD+ +FLE+LGV+ E CGLRALV+EAY  L LQTY+TSG TET+AWTI  GW+AP+AAGVIH DFERGFIRAE I Y+DLVE GSE  AK KGL RSEGK+Y+VQEGDV+ FRFNV
Sbjct:   41 GTATRSYSKTALNMKLQTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVEVPDPKLSVLEKINSSEKVVPATLEFVDVAGLVKGASDGEGLGNQFLATIRQCDAIVHVVRCFEDDNVIHVDGSVDPVRDAELINLELALADLAQVEKRLQRVKKDRKADGIEAQALEKVAAVLNNDEPARNAELDEDEEDVIKSLGLLTGKKMIYAANVADSDLAEGNELVEKLKGLAESEGANMVLVSAQVEAELVELEDDDRNDFLEALGVTLEDCGLRALVREAYDILQLQTYYTSGPTETRAWTIKKGWSAPKAAGVIHGDFERGFIRAETISYDDLVESGSEAEAKSKGLTRSEGKDYIVQEGDVILFRFNV 416          
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Match: A0A7S1ZHA1_TRICV (Obg-like ATPase 1 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1ZHA1_TRICV)

HSP 1 Score: 486 bits (1252), Expect = 3.260e-165
Identity = 249/377 (66.05%), Postives = 302/377 (80.11%), Query Frame = 1
Query:  124 AGWTTRAISSTP-TMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQKASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTAKKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLDGDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYSGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 1251
            AG   R+ S T  +MKL+T IVG+PNVGKSTLFNA+TE QGA  ANYPF TIEPN+G+V VPD +LS L +IN S K VP+TL+F D+AGLVKGAS GEGLGNQFLA IR+CDAIVHVVRCFED ++IHV+GSVDPVRD ++IN+ELALAD++QVEKRLQ+  +D+K   AE   L K+   L   +P R  DL +DE      LGLLT KK+IYA NVAD+DLA+GN +V+ +++ A  EGA VV+VSAQVE+ELV+L+ +DK EFLE+LGV+ + CGLRALV+EAY  L LQTY+TSG TE++AWTI  GWTAP+AAGVIH DFERGFIRAE I Y+DLVECGSE  AK +GLLRSEGKEYVV++ DV+ FRFNV
Sbjct:   70 AGSAARSYSRTALSMKLQTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVAVPDAKLSALEKINNSAKVVPTTLEFVDVAGLVKGASAGEGLGNQFLATIRQCDAIVHVVRCFEDENVIHVDGSVDPVRDAELINLELALADLAQVEKRLQRVKKDRKADPAEAQALEKVAAVLNNDEPARNADLDEDEENAIKSLGLLTRKKMIYAANVADSDLAEGNELVEKLKQRAASEGANVVLVSAQVEAELVELEPEDKNEFLEALGVTIDDCGLRALVREAYDVLELQTYYTSGPTESRAWTIKKGWTAPKAAGVIHGDFERGFIRAETISYDDLVECGSEAEAKSRGLLRSEGKEYVVRDSDVILFRFNV 446          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig58.14225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Q9_ECTSI5.150e-26191.17Obg-like ATPase 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835ZA16_9STRA7.950e-18373.85Obg-like ATPase 1 n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S1BGY0_9STRA4.190e-16768.41Obg-like ATPase 1 n=3 Tax=Corethron hystrix TaxID=... [more]
B7G217_PHATC1.240e-16667.22Obg-like ATPase 1 n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9UJV0_DIALT1.930e-16668.92Obg-like ATPase 1 n=2 Tax=Diacronema lutheri TaxID... [more]
A0A7S2E966_9STRA1.940e-16667.29Obg-like ATPase 1 n=1 Tax=Ditylum brightwellii Tax... [more]
A0A7S1VBU5_9STRA3.060e-16668.60Obg-like ATPase 1 n=1 Tax=Grammatophora oceanica T... [more]
A0A7S2WIQ3_9STRA1.460e-16566.22Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S4JBD1_9STRA1.620e-16566.22Obg-like ATPase 1 n=1 Tax=Odontella aurita TaxID=2... [more]
A0A7S1ZHA1_TRICV3.260e-16566.05Obg-like ATPase 1 n=2 Tax=Bacillariophyta TaxID=28... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig58contigL-elsbetiae_contig58:45550..53946 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score733.4
Seed ortholog evalue5.9e-209
Seed eggNOG ortholog2880.D7G6Q9
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.GTP binding
EggNOG OGsCOG0012@1,KOG1491@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPYchF, plastid YchF-like GTPase
Ec32 orthologEc-26_000480.1
Exons9
Model size1733
Cds size1260
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig58.14225.1prot_L-elsbetiae_contig58.14225.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig58 45550..53473 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.6707222-CDS-L-elsbetiae_contig58:45549..456401622816622.6707222-CDS-L-elsbetiae_contig58:45549..45640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 45550..45640 +
1691683692.049586-CDS-L-elsbetiae_contig58:45549..456401691683692.049586-CDS-L-elsbetiae_contig58:45549..45640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 45550..45640 +
1622816622.6848414-CDS-L-elsbetiae_contig58:46672..469801622816622.6848414-CDS-L-elsbetiae_contig58:46672..46980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 46673..46980 +
1691683692.0672903-CDS-L-elsbetiae_contig58:46672..469801691683692.0672903-CDS-L-elsbetiae_contig58:46672..46980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 46673..46980 +
1622816622.698713-CDS-L-elsbetiae_contig58:47645..477181622816622.698713-CDS-L-elsbetiae_contig58:47645..47718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 47646..47718 +
1691683692.0782828-CDS-L-elsbetiae_contig58:47645..477181691683692.0782828-CDS-L-elsbetiae_contig58:47645..47718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 47646..47718 +
1622816622.7131813-CDS-L-elsbetiae_contig58:48587..486971622816622.7131813-CDS-L-elsbetiae_contig58:48587..48697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 48588..48697 +
1691683692.0895486-CDS-L-elsbetiae_contig58:48587..486971691683692.0895486-CDS-L-elsbetiae_contig58:48587..48697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 48588..48697 +
1622816622.7243059-CDS-L-elsbetiae_contig58:50063..501571622816622.7243059-CDS-L-elsbetiae_contig58:50063..50157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 50064..50157 +
1691683692.0997646-CDS-L-elsbetiae_contig58:50063..501571691683692.0997646-CDS-L-elsbetiae_contig58:50063..50157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 50064..50157 +
1622816622.735073-CDS-L-elsbetiae_contig58:50728..508081622816622.735073-CDS-L-elsbetiae_contig58:50728..50808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 50729..50808 +
1691683692.1105976-CDS-L-elsbetiae_contig58:50728..508081691683692.1105976-CDS-L-elsbetiae_contig58:50728..50808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 50729..50808 +
1622816622.7450688-CDS-L-elsbetiae_contig58:51291..514691622816622.7450688-CDS-L-elsbetiae_contig58:51291..51469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 51292..51469 +
1691683692.122948-CDS-L-elsbetiae_contig58:51291..514691691683692.122948-CDS-L-elsbetiae_contig58:51291..51469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 51292..51469 +
1622816622.7553039-CDS-L-elsbetiae_contig58:52345..525141622816622.7553039-CDS-L-elsbetiae_contig58:52345..52514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 52346..52514 +
1691683692.1322336-CDS-L-elsbetiae_contig58:52345..525141691683692.1322336-CDS-L-elsbetiae_contig58:52345..52514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 52346..52514 +
1622816622.7658281-CDS-L-elsbetiae_contig58:53316..534731622816622.7658281-CDS-L-elsbetiae_contig58:53316..53473Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 53317..53473 +
1691683692.1424143-CDS-L-elsbetiae_contig58:53316..534731691683692.1424143-CDS-L-elsbetiae_contig58:53316..53473Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig58 53317..53473 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.7770667-UTR-L-elsbetiae_contig58:53473..539461622816622.7770667-UTR-L-elsbetiae_contig58:53473..53946Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig58 53474..53946 +
1691683692.1527634-UTR-L-elsbetiae_contig58:53473..539461691683692.1527634-UTR-L-elsbetiae_contig58:53473..53946Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig58 53474..53946 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig58.14225.1

>prot_L-elsbetiae_contig58.14225.1 ID=prot_L-elsbetiae_contig58.14225.1|Name=mRNA_L-elsbetiae_contig58.14225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=420bp
MLMRCMAGTVLLAGARTLAFRPPSTIWGVRVAGQAAATRRQAGWTTRAIS
STPTMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVE
VPDGRLSVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIR
ECDAIVHVVRCFEDSDIIHVEGSVDPVRDIDIINIELALADMSQVEKRLQ
KASRDKKVSEAEKSGLAKLLKALEEGQPVRTVDLTDDETKDTAYLGLLTA
KKVIYACNVADTDLADGNAMVDGVRKFAEDEGARVVVVSAQVESELVDLD
GDDKREFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIY
SGWTAPQAAGVIHSDFERGFIRAEAIKYEDLVECGSEKAAKEKGLLRSEG
KEYVVQEGDVLHFRFNVSK*
back to top

mRNA from alignment at L-elsbetiae_contig58:45550..53946+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig58.14225.1 ID=mRNA_L-elsbetiae_contig58.14225.1|Name=mRNA_L-elsbetiae_contig58.14225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8397bp|location=Sequence derived from alignment at L-elsbetiae_contig58:45550..53946+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGATGCGTTGCATGGCTGGAACGGTGCTCCTCGCCGGAGCACGAAC GCTGGCTTTCCGCCCTCCCTCCACGATTTGGGGCGTCAGAGGTGAGAGGC AAAAGGGTACATCAGAGTTGGCTCACCACCCCCCGTTGGGTTCGTTCAAA CTGGCGGGAGAGAGCGCAGCTCCCGGGGAGCGTGTGGTTTCGTGTAGGTG GGGAGCCCGGAGCCCGTAGGACCACAAAGCACCGAGACCGGTCAGAAGGG TGCAGTGTATCTGCAGTTGTCGTATAATTAATACAATATAAGAGGCAGCG AAACGGCAGTGCCTACGGGTACCAGCAGTGGCAGTTTGCACCTCGACACT AAACGCAGCACACTGAATACACTGGGATATTCAGTGCGAAAAGGATGGCC ATGCTCCAATGTGTCAAGGACTAGGAGAGCTTTCCGAAGACGACTGACTC GTGCGGTGCTGCAGGGTTGAGCAGATTGAGCTTTGAAAGGATCGGTCGAC TCGGGGGGGGTGTTATTCAGCGTATGTGTAAAAGGGTGTGTCGTCGGCGC GCATAGGTCCTGGAGCTCGCGTCACATCCAATTTACTGGGCGGCCCGGCG TGAGATATAGAAGACGTAGGAGCTCTCTCGCTCATAGCTTGCATTCCTCC TGCGGAAAGGGCTCGGCCACAAACTCGAAGCGTATGCATGTTGTATGGTT CACAGAACACTGCCGTACACAGCGTTGAGCACCTATCTACTGAGATGGAG ATAGACTTGCGGCGCCACCCTGGGTTACCTATACATGTGCTGCACTTTTT TTTAAGAAGTAGTAGCTTGATGCATGCTCTTCATAAACCAAAGATAATCC TTACATATTGTAGTACTGGGAAGCTCTCAGGAGGCCTGCAGTGAAACGGC CGAGTTTTGCTGTATATTTGTGTACCTTACGTCGTTTCTTGCAGACACTT CAATTGCATGTTCTCGTATGACCTCCTTGCCGATGTCCAAACACACACGT ACTCTCCCGCCGAACCACGAGAACGAGAACCCACCTAATCCGTATACTTA TATGACGATGAAACCGCAAACAAAATACCGGTGTGTGTGTTCCGTGGCTC TTCTATACATAACGCTGCTGCAGTGGCCGGCCAAGCCGCCGCCACGCGCA GACAAGCGGGATGGACAACCCGCGCAATCAGCTCTACGCCGACGATGAAG CTCAAGACGGGCATCGTGGGCATGCCGAACGTCGGCAAGTCGACGCTGTT CAACGCGGTCACGGAGGCCCAGGGGGCCATGTGCGCCAACTACCCGTTCG CAACGATCGAACCGAACATCGGGGTGGTGGAGGTGCCCGACGGCAGGCTT AGCGTCCTCGCTGAGATCAACAAGTCGGTCAAAACGGTTCCCAGCACGCT CGACTTTTACGACATCGCGGGGCTTGTCAAGGTAAATATCGTAATTCTCT GCTGCTGCTGTTGCTGCCGCCGCCGCCGCCGCTGCTGCTGCTGTGCAGTA GATCCGCGTGTCTTTTGGAGCGGGTCGATGGGTTTCTTTGTGGTTATCCT CGATCGTTTGCTACGTATGTATTTGTATTGATAGTAGTATTGTTCGCTTT GATTGGTTGTTTTCTTCTCGGGGACTGATTCTTCGTGGTAGAACGACCCT GCTCACCGGCTGTGGCTGTGCAATCAGCATACCGGTACGACACCGTGTGT GTGTGTGTGTGTGTGTATTTGTGTGTGTGTTTTGCGGTTGTTGCACAGCA CAAACGCACCGCGAAAGCCATAAAAACAGCGGTAAAGTATGTAGTCGTCG AACACGGTTGAACATAAACTGCAGATGAATACGCTGGACTTATGCAAGTA CTTGCGGTACGTCTGCAGCAGTGGCAGTAGCAGTAGCGGCAGCAGCGGCG GCTGACCGCTGCAACGCCTGCCAGCAACGTGCATGTGCACGCCAGGCAAG ACGCGCTCGGAGTGGCCGGACTTAGCCTTGTCACCGCGGTTTGATTTGAC GTGACGTAATGTGACGTGACGTGACGTGACGTGACGTGACGTGACGTGAC GTGATGTGATGTGATGTGATGTGACGTGACGTGACGTGACGGACAGGGAG CGAGCAAGGGGGAGGGGCTAGGGAACCAGTTCCTGGCAAATATCCGGGAG TGCGACGCCATTGTGCACGGTGAGACTACCAGTACATGTACGGTACGTAA GACGCACGTGCATCGTAAGACGTTGGTGTGCGACGTAGGACAAGGTAAGT ACCGGTTTGCCGTCGGGAGAGCGCGTCAACAACACGGAGAAACAAACGTT TTTTTGAGAGGTTGTACCCCTCCCGGAATTATAAATGCTTTTTTTCCAGA CCGGTTTTTATCAGGGAGCTGAAAAAAGGCCTCAAGATCAGCTTCTTCTG CTCTGTGAGGAGGGGATGATCTGCTCTAGGCAGAATTATTTGTCCGGTTG TCGCGAGCAAGCTTCGCCTCTTGACATGGCATATTGTACCTGCTTTGCGG AGAGCGTGCGTACCGTAGGTGACACAAGATACCACACCCCCTGGACGGAT TTTCAAAGCTCGATTCCTCCTCAACAAGCAGAGTGCCAGTGCCGAAAGGG GGTGGCCTTCGAAAGATCTAGTCGAGGGCTGTCCGAAAATGTGTCGTTTG GTGTTGGCATCCTCTTCGTTCGGGAGAAATGGCGCTCTAAAAGTCGGTCC AGGCGGGTGTGGTATCTTGTGTCACCTGCGGTAAGCTCAGTTAGTGCAGT TCGCGGGGGGAAGTGACATTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCCTAT TTTATCTTCTACACTTGCATTTACTTGCATTTCATCCTCGCTTGGTCCTG GATGTTTCAATCAACCCCGTCCCCGTCCCGTGTGCGTTGTTTTCGATCTG TAAAACGACACCGCCAATCGACCCGACTTGTTTACGGCACGGCACACCTC CCGTGGCGCTTGGCGGTGTTGATGGGCTCACCGATCAGTGGTGAGATGTT TCGAAGATTCGGATATCATCCACGTGGAGGGGAGCGTGGACCCGGTGCGA GACATCGATATCATCAACATCGAACTGGCCCTGGCGGATATGTCGCAGGT GGGAAAGGGGCGGGAGGAAGGAGGAAAGGCAGAAAAGAGAGGGAATAACG GCAGCAAAAATGGCAGGGAAAGAATAGAGTGCCCTCGCCTCGGCAGCTGG TTGGCGGGGAGAACCAAGGTTAGAAGTTATAAATTCTGATATTTTAGGTT TGTTTTTCTGCTCGCTTCGCCAAGTATTACGTCACTGTATGGAATACCGT TTGAACCCCATATCGAGTCCTTGCTCTAGTATGGGTTAGGTTCCATCTTT GATGCATTGTTTATTTTTCAAACGGTGGTGTACAGCTGATCGGTGGTGTG AGGAAGTAGCCCGCAAACATGGGGGAATCGTCATCATTGATGCTCATGGC ACATAAGGCAGACAAAACCCCGGCAGACGGGTTGTTGGTGTTATGCACTG TAAGGATGTATTGCGACAACGGATAGGCAAGCGGCGACGCAGCAATCGCA CAGATGACGTCAGCGAACGTAATGAAAGGATCACCATATAGCCTGCGAAA AAACATTTATTTGAAGTTAAGGCTTGGTGAAGCGAACATGGGCAAAAAAC AACGCAGAGAAGAAATGAGACACTCAGGCAGGTTCGTCCCCGTTCGCGCA CTTTCCCCCCCCTCTCCCTCTCATTTTTCTCTCTCACACACAACACTCAC GTGGAAGCATTGCAATCAATTTGTCTCCCTCTGAGGCGGACGTATTTCGT TGGCAAGCCGGTGAGCGCGGTCGACGCTATATTGTCGTCCAAAGGGGTTG ATTGCAGTCGCTGTCTTTTTCCGGCAACACATGCTCCCGGTAAAGAGGTA CATGCATGCATACGTGATGCATACGCGGTGGTAACCACATACTAGAAGTG CACTGCATCGGAACGCTGAGGTTTCGCACGAGGCGCCTGCCAGTCTCTCT CTCTCTATCTCTCTCTCTATCTCTCTCTCTCCCTCTCTCTCTCTCTCTCT CTCTTTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTTTCTCTCTCTCTCT CTCTCTCTAGTCTCTCACCCTCAATGATGACCACCGACTGTGTGAAAAAA TGGGCTGATGCAAGAAGTACGTACATATGCAACAGCTGAGCGTCTGTTTT GGTGGTGAGGTGTGCCGGCTCTGCTTGTTTGCGGGAAAGTGAGGTGAGGT GAGAAAGAAGGGAGAGAGGAGGTGGGGGGGGAGGGGGGCATTGGTACAGA ATAAAGGTGACAACAACAACAACAACAACAGCAACAAACAGCAAATAACA ACAATCACGTATCCCCCTACCCCCCTCCCTTCCTCCCTCCCCGTCCAATG ATATGCGAATGCTATGCCATGCCATGCCATGCCTACATTTCGGTCGACGT GCCACGACACGAAGGTGGAGAAACGGCTGCAGAAGGCGTCTCGAGACAAG AAGGTTTCGGAGGCGGAAAAATCTGGCCTGGCCAAGCTCCTGAAGGCCCT CGAAGAAGGTGGGTTGACGTCAGGGTCTTACTTACCCAGGCCACAGAGCC ACGGGTTCATGTTGTGTTTTCTCGGCCTACACTGCGTGTTGCAGCAAAAT TCGACCCCCTCAGCAACCTTCATAACACCCTATTTTACACACCAGTGCAC CCTTCCTGAACCGTTGAAGGAGAAGCTAAGCATGATGCTGTCGCGCGAAG GTGACTTTTATGAGAAAACCGTCCCTCCTGACTCTGCCGCTGTGTGTATT TCGACGCGCCACTTTCGGTGCTAGGTCCCCACGGTACATTGAGTCTTACG TGCCAAACTTCGTACCCATCGGTTCTGTCTGCGACACGTTCGCGTCATCG GTCGATAATCACGCGGAGGCATCGATAGAGGTTGCCCCGCACAAAAGCTG GCGCCTAGAAGTATGTATTTATTCATTTTCTACGGCGAGTAGCACTGGAG GTAATTATGTCGCCATACTGTAGTGTTGAATTAACATGATGTTATCATGA GTGTCTTCGTGATGGATTGCGTGATGTTTGCTTTCACATGATAGTCTCTC CCGATGCCTTCATGATGTTGAAAATCCAGGCCAGCCGGTGCGAACGGTAG ACTTGACGGACGACGAGACCAAGGACACGGCGTACCTCGGGCTGTTGACG GCCAAAAAGGTACAATGCCTATATACGGTACTGGAATTTTCACCAAACAG GTTCTACCCCGGGATCGGGAAATCGGACTACGGCAAAGGGCGAGGCCAAG GACACACGGCCTGCCTGCCTCGGTTTGGTGTTGTTATTGTGCTGTTGTCG TCACTTGATAAACCGTTCCGATTATTTGCTTAGTCCATACTCGGGCAATC ATGTGACGCCGTCATTCTCCGAATTGTAGTCGAACGCTAACTTACCAAAA AAAGGGTACCAGGTTTGTACACCAGACAAAAACAAAAGGACCCCACCCAA GGTCGGCACAACGCAAAGCAATTCGCTGTCACGATGCTGTCCTCTCCCTT CTTTTGGATCAGTACGGAAAGACGGAGGTGTACTAGATAGGGAGATCGGA ACCGTTTTTAATGTGAAGACAACAGCAGCAACTTCTGCGATATTTTAGCG ACAAATATGCACCTACTGCTGTGCATATATCGGCAAAAATAGGTGATCTA CGCGTGCAACGTCGCGGACACGGACCTCGCGGATGGGAACGCGATGGTGG ACGGGGTCAGAAAGTTCGCGGAGGATGAGGGAGCCCGGGTGGTGGTGGTA TCCGCCCAGGTGGAGTCGGAGCTGGTGGACTTGGATGGCGACGACAAGCG AGAGTTCCTTGAGTCGCTAGGTGAGGCTGACTTCCTTGGAGGTCGCTAAG TGTGAGGTGGAGAGAGGCAGCGGCGGAGTTGAAAATACGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGGAGGGCACAAGAAACGATCGCTT CGTCAAAGGCAGATCATTTATGTAGATATCTGGGAGGGCGTTTTTTCGGG GGGTTTTTGTTTGTTTTTTTTGGCGATCCTGTTCGGCTTGTCCGCCCCCC TTTTGGGTCAAGACCTGCTCGTGCTGCTCCTGTGTGTTGTTTTTCTTGAC AATGGGGCTGTCTGCTATATGCTTCGTATGTTGATTTTTGTGACAATATG GGATGAATCTCTGCTGTGTATGCATGATATGTAGAATACGTATGTATGGC TAAATACAGATTGAGTTTTCCCTGGGTGCAGGGGCTCTGTGTCCGCTGAT CAGAATACCGTTGATTGTGTTCGCGCACATGCTGCGGTTCCAAAGCAGTG CTTCCACATAACAACACACCCTCCCAATTAACTGTTCTGGTTCTTAGTTT CCATTTGGAGGAGGCTTTTGTGGTTCGGAAATCGTACCCCCCATATAGAG CCAGTGCGGGCGAGTTTAAGGCGGCGACCACGCGAACCACCGATGTCTGG CGACATCCGCAGGTCACGGGTAATGTACGGACGGTTTCACTGAGAGTCGT GGGAAATAACACATGAGAAAAGCTGATGTGCCGAGAGAGAAACGACGACA GAACCACAAAAATGACAAACGTTCCTATATGTCAATACACCCCTAATTGT ATTGTGACAGTCCAGTGAAATGAAGTCCTCTGCTGTGCATGTCGTTTTTT GCCACAATGAAACTACAATGAAACTCTGTTTTATGTACTGCATCAGGCGT TTCGGAGGAGACCTGCGGGTTGCGGGCCCTGGTGAAGGAGGCGTACACGG CTTTGGGGCTGCAGACGTACTTCACATCCGGGGAAACGGAGACAAAGGCA TGGACCATCTATTCCGGGTGGACTGCGCCGCAGGCAGCGGGAGTCATCCA CAGCGATTTCGAAAGGTGATTTTTTCTACGCAGTAGTCTACGCAGGGTTT TCATCTTTTCATCTACAGCTAACATACGAGATCAAGTATGGAAACCGGGA AAGGGGGGTCGGTGGTTGGGGCTAGTATTAGGGTTAGGGGTAGGGTTATT TTCCTAGATAAACGTAATTTCCAGCGTACTGTAGGCGGTCCTTTCTACGG GGTTACAATAGTCTGGTTCTTGCTTCGGCTGAGATTCTCAAATGTGACGC CGGGAGATATGGTATCTGTCTCTCAATCGTACATAGCATGAGCATTCTAG GGTCGGGATGGACTGCTGTGCTGTCTTTGCGCATCTCTGAACCCCTCCCT CTTGGTGGTGTCTTATCCTCTTGATTCCTTCGATTATTGTTCGCCTTGCT GGAAATTGCGGTTGCCGTAGGGTTATGGACCCACCCCCCTGGTCGCCTTG CTCGTGTCGTCGGCGGCGCCCCTTCCGCTCTCCAAATCGCTCATTCTTTC GCCTTGTCGCCTGATCATTTCGTTGCTTCATTCCATGCTTCTCGACTAAC TTTTAGGGCCTGACTTGATGTGCTCGTTTTTCCTTTTTTTATGCGTTTTT TCCTCATTTATGCAAATTTTCCCAAAAAAATGTCATTTACGCACGTTGTT TACCCTCAAAAAAGGGATCAATGCTAAAAAATATGCCCAATTTTGGTGCG CATATGTATGTAGGCATAAAAGCACAATTTGGCCTTATTTATTTTCTCTT CTAGCTGTGCATTCAAGCCAGGGCCTACTAATCTACAACAAGTTTTTGTT GTCTCTCTTTTCGGCAGGGGTTTCATTCGGGCGGAGGCGATCAAGTACGA GGACCTCGTGGAATGCGGCAGTGAAAAGGCCGCGAAGGAGAAGGGGCTGT TGAGGAGCGAGGGCAAGGAGTACGTCGTACAAGAGGGAGACGTGCTCCAC TTCCGCTTCAACGTGTCCAAGTGAAAACCCACCTCGCTGCGTTGGTGTGT AGACGAGAAGATAGTTCGGTAGCTCTACAGGGAGTGAGTAGATCTGATGT ACGTATCGTATGCACGTGAGAAGTAGAGGAGGCACCGCCGTGCGTGGTGT TGTTGTTGTTGTGGGTGGCCTGCCTTGTTGGTTCACCGGGTACCGGGGGG TGTTCAATTTCAATCTTGAAAAGCGAGCATGTGCTGGATCAGTCAGAGAC GATCGAGTGTTGATGATTATTGAGTATCTACCAGCCTGGGTTGGGTTGGT TTCCTGAAAAAGCACCGCGATGTTTGGTGCCCTGTGCTGAAGGCAACCAT CAAAGGACGGGCTTCCAGTACAACAGCAGTACCACAATAATACCTGTATT TTTTAACCATGGATGCGACAGCTGACAGCTAACCTAGTATAACTCGAGAG TTAACAATTCAAAACGTCTTTGGATGTGTATTTACGCTAGATATCGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig58:45550..53946+

>mRNA_L-elsbetiae_contig58.14225.1 ID=mRNA_L-elsbetiae_contig58.14225.1|Name=mRNA_L-elsbetiae_contig58.14225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2520bp|location=Sequence derived from alignment at L-elsbetiae_contig58:45550..53946+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGATGCGTTGCATGGCTGGAACGGTGCTCCTCGCCGGAGCACGAAC
GCTGGCTTTCCGCCCTCCCTCCACGATTTGGGGCGTCAGAGATGTTGATG
CGTTGCATGGCTGGAACGGTGCTCCTCGCCGGAGCACGAACGCTGGCTTT
CCGCCCTCCCTCCACGATTTGGGGCGTCAGAGTGGCCGGCCAAGCCGCCG
CCACGCGCAGACAAGCGGGATGGACAACCCGCGCAATCAGCTCTACGCCG
ACGATGAAGCTCAAGACGGGCATCGTGGGCATGCCGAACGTCGGCAAGTC
GACGCTGTTCAACGCGGTCACGGAGGCCCAGGGGGCCATGTGCGCCAACT
ACCCGTTCGCAACGATCGAACCGAACATCGGGGTGGTGGAGGTGCCCGAC
GGCAGGCTTAGCGTCCTCGCTGAGATCAACAAGTCGGTCAAAACGGTTCC
CAGCACGCTCGACTTTTACGACATCGCGGGGCTTGTCAAGTGGCCGGCCA
AGCCGCCGCCACGCGCAGACAAGCGGGATGGACAACCCGCGCAATCAGCT
CTACGCCGACGATGAAGCTCAAGACGGGCATCGTGGGCATGCCGAACGTC
GGCAAGTCGACGCTGTTCAACGCGGTCACGGAGGCCCAGGGGGCCATGTG
CGCCAACTACCCGTTCGCAACGATCGAACCGAACATCGGGGTGGTGGAGG
TGCCCGACGGCAGGCTTAGCGTCCTCGCTGAGATCAACAAGTCGGTCAAA
ACGGTTCCCAGCACGCTCGACTTTTACGACATCGCGGGGCTTGTCAAGGG
AGCGAGCAAGGGGGAGGGGCTAGGGAACCAGTTCCTGGCAAATATCCGGG
AGTGCGACGCCATTGTGCACGGGAGCGAGCAAGGGGGAGGGGCTAGGGAA
CCAGTTCCTGGCAAATATCCGGGAGTGCGACGCCATTGTGCACGTGGTGA
GATGTTTCGAAGATTCGGATATCATCCACGTGGAGGGGAGCGTGGACCCG
GTGCGAGACATCGATATCATCAACATCGAACTGGCCCTGGCGGATATGTC
GCAGTGGTGAGATGTTTCGAAGATTCGGATATCATCCACGTGGAGGGGAG
CGTGGACCCGGTGCGAGACATCGATATCATCAACATCGAACTGGCCCTGG
CGGATATGTCGCAGGTGGAGAAACGGCTGCAGAAGGCGTCTCGAGACAAG
AAGGTTTCGGAGGCGGAAAAATCTGGCCTGGCCAAGCTCCTGAAGGCCCT
CGAAGAAGGTGGAGAAACGGCTGCAGAAGGCGTCTCGAGACAAGAAGGTT
TCGGAGGCGGAAAAATCTGGCCTGGCCAAGCTCCTGAAGGCCCTCGAAGA
AGGCCAGCCGGTGCGAACGGTAGACTTGACGGACGACGAGACCAAGGACA
CGGCGTACCTCGGGCTGTTGACGGCCAAAAAGGCCAGCCGGTGCGAACGG
TAGACTTGACGGACGACGAGACCAAGGACACGGCGTACCTCGGGCTGTTG
ACGGCCAAAAAGGTGATCTACGCGTGCAACGTCGCGGACACGGACCTCGC
GGATGGGAACGCGATGGTGGACGGGGTCAGAAAGTTCGCGGAGGATGAGG
GAGCCCGGGTGGTGGTGGTATCCGCCCAGGTGGAGTCGGAGCTGGTGGAC
TTGGATGGCGACGACAAGCGAGAGTTCCTTGAGTCGCTAGGTGATCTACG
CGTGCAACGTCGCGGACACGGACCTCGCGGATGGGAACGCGATGGTGGAC
GGGGTCAGAAAGTTCGCGGAGGATGAGGGAGCCCGGGTGGTGGTGGTATC
CGCCCAGGTGGAGTCGGAGCTGGTGGACTTGGATGGCGACGACAAGCGAG
AGTTCCTTGAGTCGCTAGGCGTTTCGGAGGAGACCTGCGGGTTGCGGGCC
CTGGTGAAGGAGGCGTACACGGCTTTGGGGCTGCAGACGTACTTCACATC
CGGGGAAACGGAGACAAAGGCATGGACCATCTATTCCGGGTGGACTGCGC
CGCAGGCAGCGGGAGTCATCCACAGCGATTTCGAAAGGCGTTTCGGAGGA
GACCTGCGGGTTGCGGGCCCTGGTGAAGGAGGCGTACACGGCTTTGGGGC
TGCAGACGTACTTCACATCCGGGGAAACGGAGACAAAGGCATGGACCATC
TATTCCGGGTGGACTGCGCCGCAGGCAGCGGGAGTCATCCACAGCGATTT
CGAAAGGGGTTTCATTCGGGCGGAGGCGATCAAGTACGAGGACCTCGTGG
AATGCGGCAGTGAAAAGGCCGCGAAGGAGAAGGGGCTGTTGAGGAGCGAG
GGCAAGGAGTACGTCGTACAAGAGGGAGACGTGCTCCACTTCCGCTTCAA
CGTGTCCAAGTGAGGGTTTCATTCGGGCGGAGGCGATCAAGTACGAGGAC
CTCGTGGAATGCGGCAGTGAAAAGGCCGCGAAGGAGAAGGGGCTGTTGAG
GAGCGAGGGCAAGGAGTACGTCGTACAAGAGGGAGACGTGCTCCACTTCC
GCTTCAACGTGTCCAAGTGA
back to top