mRNA_L-elsbetiae_contig58.14224.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: D7G6Q8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q8_ECTSI) HSP 1 Score: 369 bits (948), Expect = 7.450e-122 Identity = 204/264 (77.27%), Postives = 223/264 (84.47%), Query Frame = 1 Query: 40 MRC-ASAAAFVMALCCCQRAGGFLAPAP--ARGVSSRGA--RVSMSGHSPGPTSRGDAIAAAAAGLLATVAGVSAAGAAT-IPEALPACPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVMVGDGGSNRNRQGRVLVLEALRKKLGWPENGIDNYMRDQGIDSGTSRAKGYLSELGWRQGETQSYGEEDEY 813 MRC +SA+ V++ CC GF++P A+ SSRG V+M+ S GPTSRG AIAAAAAGLLATV GVSAAGA T +PE+LPACPTEGNCVSSTSFKLVMQGRYMAPWSYTGD+KDAS AF+KLLKAVENDPQLKLVDQDA+ LYISA AKSAVPPDG DKVEFLFKP DGLVSFRSKSLK+V+AGPV+VGDG SNRNR LEALRKKLGWPE GIDNYMRDQGIDSGTSRAKGYLSE GWR+ E+QSYGEEDEY Sbjct: 1 MRCFSSASLLVVSATCCH---GFVSPGAVVAKQASSRGRVQAVTMAAESSGPTSRGQAIAAAAAGLLATVGGVSAAGAGTTVPESLPACPTEGNCVSSTSFKLVMQGRYMAPWSYTGDSKDASVAFAKLLKAVENDPQLKLVDQDADALYISAMAKSAVPPDGFDKVEFLFKPSDGLVSFRSKSLKNVYAGPVIVGDGNSNRNR------LEALRKKLGWPEEGIDNYMRDQGIDSGTSRAKGYLSEFGWRKVESQSYGEEDEY 255
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: A0A7S3XUK8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUK8_HETAK) HSP 1 Score: 132 bits (333), Expect = 1.340e-31 Identity = 71/163 (43.56%), Postives = 108/163 (66.26%), Query Frame = 1 Query: 277 LPACPTEGNCVSSTSFKLVMQGRYMAPWSY--TGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVMVGDGGSNRNRQGRVLVLEALRKKLGWPENGIDNYMRDQGIDSGTSRAKGYLS 759 L ACP +GNC+S++S + + ++ +PW++ TGD+ D EA+SKL+K ++ DP LKL + D E Y+ ATAKSA+PP GLD +EFL +PED + ++R+ S ++V+ GPV++GDGG+N+NR L+ LR +L W G + +G+D R KG S Sbjct: 87 LAACPNQGNCLSTSSIRSL--DKFSSPWTFENTGDSID--EAWSKLVKIIKEDPLLKLEELDNEKFYLRATAKSAIPPTGLDDLEFLLRPEDKIATYRTASREAVYVGPVLLGDGGANQNR------LDKLRYQLKWDVVGAGPVEQQKGLD----RLKGSTS 235
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: A0A7S0QPZ6_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPZ6_9CRYP) HSP 1 Score: 100 bits (248), Expect = 1.460e-19 Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 286 CPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGP--VMVGDGGSNRNRQGRVLVLEALRKKLGWPE 687 C T+ NCVS ++ K Q ++APW YT T A+ A+ LL AVE DP L++V + Y+ A AKS VP DG D VEFL P + +V++RS S ++V+ P V + DGG R R + L ++LGW E Sbjct: 121 CQTQANCVSVSANKNPTQ--FVAPWDYTVKTGSAAAAWKALLAAVERDPSLRVVQVNDTAFYLRAEAKSKVPQDGTDDVEFLLIPSEKIVTYRSASRQNVYIYPYQVAIPDGGYQRQR------MRGLLQELGWVE 248
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: A0A7S1HAM6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HAM6_HEMAN) HSP 1 Score: 99.4 bits (246), Expect = 4.170e-19 Identity = 55/136 (40.44%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 286 CPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGWPE 687 C + NCVS ++ K Q ++APW YT T DA A+ L + +DP LK+VD D LY+ A S +P G+D VEFLF PE+ +V+ RS S + F P + DGG + R ++ +RKKLGW E Sbjct: 159 CSAQANCVSVSAQKNPSQ--FIAPWDYTVTTNDAGAAWKLLKGTIGDDPSLKIVDVDDAALYLRAEGTSKIPKGGVDDVEFLFVPEEKIVTIRSGSRDNQFVYPYQQPIPDGGYQKER------MDGIRKKLGWVE 286
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: W7TWW3_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWW3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 5.820e-19 Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 286 CPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQD--AEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGW 681 C + NC+SSTS +YM+PW + G +D A+ L++AVE LK+V+ D ++ Y+ A A S VPP G+D +EFL P+DGLV FRS S + F P+ VGDGGS + R LE ++K +GW Sbjct: 125 CLSAENCISSTSVNN--PSKYMSPWVFNGAGEDVPTAWLSLVRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKR------LETIQKAVGW 252
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: M1VGZ3_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VGZ3_CYAM1) HSP 1 Score: 95.5 bits (236), Expect = 7.990e-19 Identity = 57/139 (41.01%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 271 EALPACPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGW 681 ++L +C +E NCVSS++ + +Y APWSY T EA+S L AV +P + + ++ +G Y+ ATA S PP G D +EFL +PE+ LV +RS+S K + P +GD GSNR R LE +R +LGW Sbjct: 69 KSLGSCGSEENCVSSSAIGSPV--KYGAPWSYATVTDSPREAWSALEAAVRAEPGVAV--REVDGFYLHATAPSVFPPGGEDDIEFLLRPEEKLVLYRSRSQKVTYIYPFHQPLGDFGSNRKR------LERIRDRLGW 197
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: A0A7J7II66_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II66_9RHOD) HSP 1 Score: 93.6 bits (231), Expect = 3.720e-18 Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 274 ALPACPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGW 681 AL C E NC+SST+ + +Y PWSY T D EA+S L AV +P L++ Q + Y+ AT S PP G+D +EFL +P D +V +RS S K + P + +GD G+N+ R LE +R +LGW Sbjct: 70 ALAKCAAEDNCISSTA--VGNPSKYGPPWSYAKATADPGEAWSSLEAAVRAEPGLEV--QKVQKYYLYATGPSVFPPGGVDDIEFLMRPMDEVVLYRSSSRKVTYVYPFLQPLGDFGTNKAR------LERIRNRLGW 197
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: A0A4D9D6F4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.950e-16 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 349 MAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQD--AEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGW 681 M+PW + G +D A+ L++AVE LK+V+ D ++ Y+ A A S VPP G+D +EFL P+DGLV FRS S + F P+ VGDGGS + R LE ++K +GW Sbjct: 1 MSPWVFNGAGEDVPTAWLSLVRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKR------LETIQKSVGW 109
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: D8LT63_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT63_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 2.060e-16 Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 286 CPTEGNCVSSTSFKLVMQGRYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVDQDAEGLYISATAKSAVPPDGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGW 681 C + NC+S+++ K+ G+ +PW Y T DA AF+ L+ AVE + + D EG YI A S VPP +D VEFL KPED +V +RS S ++F P+ V D G + R LE +R LGW Sbjct: 134 CSSSENCLSTSAVKV--PGKLGSPWEYAMRTDDADTAFASLVHAVERTSEATMKIVDREGHYILAEFPSKVPPGSVDSVEFLVKPEDQIVLYRSVSRDTLFLYPLQQPVSDQGKIKER------LEGIRNDLGW 259
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Match: A0A7S0CBW6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBW6_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.650e-13 Identity = 50/125 (40.00%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 343 RYMAPWSYTGDTKDASEAFSKLLKAVENDPQLKLVD-QDAEGLYISATAKSAVPP-----DGLDKVEFLFKPEDGLVSFRSKSLKSVFAGPVM--VGDGGSNRNRQGRVLVLEALRKKLGWPENG 693 R+ PW+Y +T D A+ L+ AV N Q V+ + Y+ ATAK+ PP D LD +EFL +P+D LV +RS S SVF P+ V D SN R LE +R+ LGW E G Sbjct: 93 RFSPPWTYLTETSDPQVAWKSLINAVNNVDQFGKVEIVELTNNYLHATAKTVSPPGLTGEDALDDLEFLLRPDDNLVLYRSSSRISVFVYPLTQPVSDRNSNLKR------LERIRETLGWEEMG 211 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig58.14224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig58.14224.1 >prot_L-elsbetiae_contig58.14224.1 ID=prot_L-elsbetiae_contig58.14224.1|Name=mRNA_L-elsbetiae_contig58.14224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp MRCASAAAFVMALCCCQRAGGFLAPAPARGVSSRGARVSMSGHSPGPTSRback to top mRNA from alignment at L-elsbetiae_contig58:38695..45395- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig58.14224.1 ID=mRNA_L-elsbetiae_contig58.14224.1|Name=mRNA_L-elsbetiae_contig58.14224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6701bp|location=Sequence derived from alignment at L-elsbetiae_contig58:38695..45395- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig58:38695..45395- >mRNA_L-elsbetiae_contig58.14224.1 ID=mRNA_L-elsbetiae_contig58.14224.1|Name=mRNA_L-elsbetiae_contig58.14224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1554bp|location=Sequence derived from alignment at L-elsbetiae_contig58:38695..45395- (Laminarionema elsbetiae ELsaHSoW15)back to top |