mRNA_L-elsbetiae_contig5788.14206.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5788.14206.1
Unique NamemRNA_L-elsbetiae_contig5788.14206.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: D7FV14_ECTSI (Phosphatidate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV14_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 1.640e-102
Identity = 152/189 (80.42%), Postives = 166/189 (87.83%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVVVSERQTQRES-----------AVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMIGST 534
            +TWEGF+GAFFFTC+FAFYFS FLAK+EWFTCPVQDLNFRPKPIHC PDA+FLPAEFVV    +   E+           +VT+APIQLHALLMA FTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITT+EGLLAAATMLSH EQ+ELL+ELK+M+ ST
Sbjct:  153 KTWEGFMGAFFFTCLFAFYFSAFLAKFEWFTCPVQDLNFRPKPIHCNPDAVFLPAEFVVPESVRWFMEAFLFFRLPVASLSVTLAPIQLHALLMAGFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTVEGLLAAATMLSHSEQMELLDELKHMMNST 341
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A6H5L891_9PHAE (Phosphatidate cytidylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L891_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 2.160e-101
Identity = 153/189 (80.95%), Postives = 165/189 (87.30%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVVVSERQTQRES-----------AVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMIGST 534
            +TWEGFIGAFFFTC+FAFYFS FLAK+EWFTCPVQDLNFRPKPIHC PDA+FLPAEFV+    +   E+           +VT+APIQLHALLMA FTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITT+EGLLAAATMLSH EQLELL+ELK M+ ST
Sbjct:  246 KTWEGFIGAFFFTCLFAFYFSAFLAKFEWFTCPVQDLNFRPKPIHCNPDAVFLPAEFVMPESVRWFMEAFLFFRLPVASLSVTLAPIQLHALLMAGFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTVEGLLAAATMLSHSEQLELLDELKQMMNST 434
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A836C8B8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B8_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.430e-56
Identity = 102/197 (51.78%), Postives = 131/197 (66.50%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDL------NFRPKPIHCKPDALFLPAE-------------FVVVSERQTQRE----SAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNM 522
            +TWEGF+GA  FT V A++ +GFLA+Y+WFTCPV+ L      N     +HC  D +F   E             F+++            S +   PIQLHA++MA+FTS+IAPFGG+WASAIKR YGIKDFDSIIPGHGGVTDRMDCQFITALFVSV++ TFIRP+  T+  LLA A++L   ++ EL+ EL  +
Sbjct:  185 KTWEGFLGAMVFTVVIAYFAAGFLAQYQWFTCPVERLTLGLASNDGYTQLHCVADPVFQVQEMHIPGPILRFFKNFLLIDLNMMLERVFGTSCLVTKPIQLHAMVMASFTSLIAPFGGFWASAIKRTYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVYFRTFIRPHAVTVGSLLAQASLLPLEQRQELMLELSKL 381
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: F4Q024_CAVFA (Phosphatidate cytidylyltransferase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q024_CAVFA)

HSP 1 Score: 179 bits (454), Expect = 4.570e-51
Identity = 89/184 (48.37%), Postives = 126/184 (68.48%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVVVSERQTQRE-------SAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMIGS 531
            +TWEGFIGA  +T +FA+YF+G+L +++W  CP    +F  +P+HC PD +FL  EF++ +E  T          +++T  PIQLHAL++A F S+IAPFGG++AS IKRAY IKDFD+I PGHGGVTDR DCQFI  LF+ V+Y TFI+ N      +     ML   +Q+++ ++L+N+I S
Sbjct:  280 KTWEGFIGATIWTLIFAYYFAGYLIQFDWVICPKGSGDFL-EPLHCTPDPVFLQKEFIIPTEVSTILTKYLGITLTSLTFVPIQLHALVLALFGSLIAPFGGFFASGIKRAYKIKDFDNIFPGHGGVTDRTDCQFIMGLFIHVYYYTFIKTNELDASQIWQGLLMLPVDQQVQIFQKLQNVISS 462
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A2D4BJP7_PYTIN (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJP7_PYTIN)

HSP 1 Score: 181 bits (460), Expect = 5.630e-51
Identity = 90/179 (50.28%), Postives = 120/179 (67.04%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVVVSERQTQ-RESAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMIGST 534
            +TWEGFIGAF  T  FA + S +L+K++W  CP++ L   P+P+ C P  +FLP  + V +        S  T+ PIQ+H++  A F SV++PFGG+ ASAIKR Y IKDFDS+IPGHGGV DRMDCQ ITALF SV+Y TFIR  + ++  +L     LSH EQ ELL+ L+ +  S+
Sbjct:  234 KTWEGFIGAFVCTIAFAIFASAWLSKFQWMICPLESLQLIPEPLSCTPRDVFLPQSYTVPAVLAPYIGRSEFTLLPIQIHSIAFAIFASVVSPFGGFHASAIKRTYHIKDFDSVIPGHGGVMDRMDCQLITALFTSVYYVTFIRSPVPSVAAILNLIAKLSHXEQQELLQRLRELKDSS 412
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: K3X184_GLOUD (Phosphatidate cytidylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X184_GLOUD)

HSP 1 Score: 177 bits (450), Expect = 6.490e-51
Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVV-VSERQTQRESAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMI 525
            +TWEGFIGAF  T VFA + S +LAK+EW  CP++ L   P  + C    +F PA + V  S       S +   PIQ+H++  ATF SVI+PFGG++ASAIKR YG+KDFDS+IPGHGGV DRMDCQ ITALF SV+YNTFIR  + ++  +L   + LS  EQ E+L+ ++ ++
Sbjct:  244 KTWEGFIGAFVCTVVFAIFASAWLAKFEWMICPLESLQLIPGSLSCPRHEVFSPAVYTVPASIAGYIGRSQIAYYPIQIHSICFATFASVISPFGGFYASAIKRTYGLKDFDSVIPGHGGVMDRMDCQLITALFTSVYYNTFIRSPMPSVAMILNIVSRLSVEEQHEVLQRIQELL 419
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A151ZBY6_9MYCE (Phosphatidate cytidylyltransferase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZBY6_9MYCE)

HSP 1 Score: 178 bits (451), Expect = 8.420e-51
Identity = 90/182 (49.45%), Postives = 126/182 (69.23%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVVVSERQTQRE-------SAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMI 525
            +TWEGFIGA F T +FA+YF+GFL +Y+W TCP  D NF  +P+HC  D +FL  EFV+  E  +          ++ +  PIQLHAL++A F S+IAPFGG++AS IKRAY IKDFD+I PGHGGVTDR DCQFI  LF+ V+Y+TFI+        ++ A  ML   E++++++++K+ +
Sbjct:  267 KTWEGFIGATFCTLIFAYYFAGFLIQYDWITCPKGDGNFL-EPLHCVTDPVFLMKEFVIPPEISSVLSKYLGLHITSFSFIPIQLHALVLALFGSLIAPFGGFFASGIKRAYKIKDFDNIFPGHGGVTDRTDCQFIMGLFIYVYYSTFIKTYEVDPSQIIQAIMMLPIDERIKIIDKVKSTL 447
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A8J4PZ47_9MYCE (Phosphatidate cytidylyltransferase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZ47_9MYCE)

HSP 1 Score: 177 bits (448), Expect = 2.390e-50
Identity = 90/182 (49.45%), Postives = 123/182 (67.58%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVVVSERQTQRE-------SAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMI 525
            +TWEGFIGA F+T +FA+YF+GFL +++W  CP  +  F  + +HC PD +FLP EF++  E  +          S+ T  PIQ HAL++A F S+IAPFGG++AS IKRAY IKDFD+I PGHGGVTDR DCQFI  LF+ V++NTFI+        + A   ML   E++++ E+LK+ I
Sbjct:  264 KTWEGFIGATFWTLLFAYYFAGFLIQFDWVICPKGNAGFM-EALHCTPDPVFLPKEFIIPHEISSILSKYLGLTISSFTFIPIQYHALVLALFGSLIAPFGGFFASGIKRAYKIKDFDTIFPGHGGVTDRTDCQFIMGLFIHVYFNTFIKTLEMDPTQIWAGLMMLPMDEKIQIFEKLKSTI 444
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A1V9YRB8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRB8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.110e-49
Identity = 93/180 (51.67%), Postives = 125/180 (69.44%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQ-DLNFRPKPIHCKPDALFLPAEFVVVSERQTQRESAVT---MAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMIG 528
            +TWEGFIGAFF T VFAF+ S +LA   W TCP+       P P+ C    +F+PA + V +   T    AVT   + P+QLHA++ A+FTSVI+PFGG++ASAIKRAY +KDFDS++PGHGGV DRMDCQFITALF +V+ +TFI    T +E ++ +   LS  EQ ++L +L++ IG
Sbjct:  245 KTWEGFIGAFFCTLVFAFFSSAWLATLPWMTCPLDAPPQLFPDPLACNVHPVFVPASYAVPAA-VTSLLPAVTHVQLYPVQLHAIVFASFTSVISPFGGFYASAIKRAYKLKDFDSLLPGHGGVMDRMDCQFITALFTAVYCSTFIWSYHTNVEAIVTSVLRLSENEQRQILLQLQSAIG 423
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BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Match: A0A5D6XX18_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX18_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.320e-49
Identity = 85/176 (48.30%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:    1 QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDALFLPAEFVV-VSERQTQRESAVTMAPIQLHALLMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLEGLLAAATMLSHPEQLELLEELKNMI 525
            +TWEGFIGAF  T VFA + S +LAK++W  CP++ L   P  + C    +F+P  + V  S  +    S +   PIQ+H++  ATF SV+APFGG++ASAIKR + +KDFDS+IPGHGGV DRMDCQFITALF SV+YNTFIR  + ++  ++   + LS  +Q E+L+ ++ ++
Sbjct:  241 KTWEGFIGAFACTIVFAVFCSAWLAKFQWMICPLESLQLIPDALSCPVRGVFVPTVYTVPASVAKYIGRSQIAYLPIQIHSIWFATFASVVAPFGGFYASAIKRTHNLKDFDSVIPGHGGVMDRMDCQFITALFTSVYYNTFIRSPVPSVAMVVNIVSKLSLDDQHEVLQRIQELL 416
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5788.14206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV14_ECTSI1.640e-10280.42Phosphatidate cytidylyltransferase n=1 Tax=Ectocar... [more]
A0A6H5L891_9PHAE2.160e-10180.95Phosphatidate cytidylyltransferase n=1 Tax=Ectocar... [more]
A0A836C8B8_9STRA3.430e-5651.78Phosphatidate cytidylyltransferase n=1 Tax=Tribone... [more]
F4Q024_CAVFA4.570e-5148.37Phosphatidate cytidylyltransferase n=1 Tax=Cavende... [more]
A0A2D4BJP7_PYTIN5.630e-5150.28Phosphatidate cytidylyltransferase (Fragment) n=1 ... [more]
K3X184_GLOUD6.490e-5151.14Phosphatidate cytidylyltransferase n=1 Tax=Globisp... [more]
A0A151ZBY6_9MYCE8.420e-5149.45Phosphatidate cytidylyltransferase n=1 Tax=Tieghem... [more]
A0A8J4PZ47_9MYCE2.390e-5049.45Phosphatidate cytidylyltransferase n=1 Tax=Polysph... [more]
A0A1V9YRB8_9STRA1.110e-4951.67Phosphatidate cytidylyltransferase n=1 Tax=Achlya ... [more]
A0A5D6XX18_9STRA1.320e-4948.30Phosphatidate cytidylyltransferase n=1 Tax=Pythium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5788contigL-elsbetiae_contig5788:9580..11522 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.8
Seed ortholog evalue3.4e-81
Seed eggNOG ortholog2880.D7FV14
Preferred nameCDS1
KEGG rclassRC00002
KEGG koko:K00981,ko:K08818
KEGG ReactionR01799
KEGG Pathwayko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070
KEGG ModuleM00093
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004142,GO:0004605,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005783,GO:0005789,GO:0006139,GO:0006220,GO:0006221,GO:0006575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006656,GO:0006657,GO:0006658,GO:0006661,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007602,GO:0007603,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009266,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009628,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010511,GO:0010513,GO:0010562,GO:0010866,GO:0010868,GO:0010883,GO:0012505,GO:0016020,GO:0016021,GO:0016024,GO:0016056,GO:0016740,GO:0016772,GO:0016779,GO:0016780,GO:0017169,GO:0018130,GO:0019216,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019866,GO:0019953,GO:0022412,GO:0022414,GO:0023052,GO:0030133,GO:0030154,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031410,GO:0031966,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0034641,GO:0034654,GO:0040011,GO:0042175,GO:0042330,GO:0043052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045833,GO:0045834,GO:0045937,GO:0046341,GO:0046470,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051174,GO:0051606,GO:0051704,GO:0051716,GO:0055086,GO:0065007,GO:0065008,GO:0070085,GO:0070319,GO:0070382,GO:0070567,GO:0071071,GO:0071073,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090207,GO:0090209,GO:0090407,GO:0097164,GO:0097708,GO:0098827,GO:0099503,GO:0104004,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903725,GO:1903727,GO:1905952
EggNOG free text desc.phosphatidate cytidylyltransferase activity
EggNOG OGsCOG0575@1,KOG1440@2759
EC2.7.11.22,2.7.7.41
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03041
Exons3
Model size537
Cds size537
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5788.14206.1prot_L-elsbetiae_contig5788.14206.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5788 9580..11522 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816620.8231022-CDS-L-elsbetiae_contig5788:9579..96881622816620.8231022-CDS-L-elsbetiae_contig5788:9579..9688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 9580..9688 -
1691683690.5275917-CDS-L-elsbetiae_contig5788:9579..96881691683690.5275917-CDS-L-elsbetiae_contig5788:9579..9688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 9580..9688 -
1622816620.8455162-CDS-L-elsbetiae_contig5788:10449..106681622816620.8455162-CDS-L-elsbetiae_contig5788:10449..10668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 10450..10668 -
1691683690.5421238-CDS-L-elsbetiae_contig5788:10449..106681691683690.5421238-CDS-L-elsbetiae_contig5788:10449..10668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 10450..10668 -
1622816620.8601058-CDS-L-elsbetiae_contig5788:11313..115221622816620.8601058-CDS-L-elsbetiae_contig5788:11313..11522Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 11314..11522 -
1691683690.5527365-CDS-L-elsbetiae_contig5788:11313..115221691683690.5527365-CDS-L-elsbetiae_contig5788:11313..11522Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 11314..11522 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5788.14206.1

>prot_L-elsbetiae_contig5788.14206.1 ID=prot_L-elsbetiae_contig5788.14206.1|Name=mRNA_L-elsbetiae_contig5788.14206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
QTWEGFIGAFFFTCVFAFYFSGFLAKYEWFTCPVQDLNFRPKPIHCKPDA
LFLPAEFVVVSERQTQRESAVTMAPIQLHALLMATFTSVIAPFGGYWASA
IKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTLE
GLLAAATMLSHPEQLELLEELKNMIGST*
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mRNA from alignment at L-elsbetiae_contig5788:9580..11522-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5788.14206.1 ID=mRNA_L-elsbetiae_contig5788.14206.1|Name=mRNA_L-elsbetiae_contig5788.14206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1943bp|location=Sequence derived from alignment at L-elsbetiae_contig5788:9580..11522- (Laminarionema elsbetiae ELsaHSoW15)
CAGACATGGGAGGGATTTATCGGCGCGTTTTTCTTCACGTGTGTCTTCGC
CTTCTACTTCTCTGGCTTCCTGGCCAAGTACGAGTGGTTCACCTGCCCAG
TGCAAGACCTCAACTTCAGGCCGAAGCCGATCCACTGCAAGCCCGACGCG
CTCTTCCTTCCAGCGGAGTTCGTCGTGGTGAGTGAGCGACAGACACAACG
AGAGAGTGCGTGCATTGACGATAAATATACATGTGTATGCGTTTGGTCCA
ACACTGCTGCTCATGGGGTTAGTCGCATCGAAGAGCGGAGTTTTTGTCCA
GCGCGGCTGACGGAATTGCACCGCTGACTCGCTATTATAGTATCAACAAC
ACCAAGGTTGAGGATCTCGCCCCTGGAAGCAGCTAAAATCGACGCGTCGC
GCGGCAACAAAATCTGCAGAGTTTTGGTGACGGCCGGTCACCGCAAAAGT
GTCTGGGAAGGTCGGGTTCGGATGAAGCACTACACTTTCTTGACAGCGCC
AAAATAGGTGATTATGCTGAGAGCGGCAGTGGTAAAAGCGGCGAGAACCC
ACCCACTCGCTTTCCAGGCGTTTCGTGTTTTGGAGAGCAACACAAGTACA
TATTCGCATTGGCACCCCCTGTCTGAAAAAAGGCCCCGCGGACGATGCTT
TCGAGTCGGCAGAACGATCCGCGAGCGTCGAAATGATTATCTGATGGAAA
ATTACTGCTGTGCCCCCCCCTCCCCCTGCCCCTATTTGTTTGTGCGAATA
CGTACCATATATGGTACATATACGTCACACGATATGCAGCCGGAGACCGT
CCGGTCATTCATTGAGGCGTTCCTCTTCTTCAGACTGCCGGAGGCTTTTC
TCAGCGTCACCATGGCCCCCATCCAGCTCCACGCGCTGCTAATGGCGACC
TTCACGTCGGTCATCGCGCCATTCGGCGGCTATTGGGCGTCGGCGATAAA
GCGCGCGTACGGCATCAAGGACTTCGACTCGATCATCCCGGGGCACGGCG
GGGTCACGGACCGGATGGACTGCCAGTTCATCACGGCCCTGTTCGTTTCG
GTGCACTACAACACGTTCATCAGGTAATTGAACCAAAACCTTTTGGTACT
TGACGAGCCCATGTATCATGCACGCAGCTCGCTGGTTCTGTTGTCGTTGC
TTTTTTCGAGGAGGCCCGAGTAGTTGGGGTTAGACGCACATCGTCAGGTA
TTCAACCAAAAGCCTGTGTACGTTGTACTCTCAGTGCGCTGCGACACATT
CGTCAGGTAACGCAACCAAAACCCTTGTACTTGACGAACCTATGTATGTA
CATGCCCTACATGCAGCTCGCTAGTTCGTTGTTGTCGCCTGTTGCGTGAC
AAGGCTTGATTGGTGCCGTATGTGACATAAAGTACGACGCCCCTGTGATG
CCATGTTTGAGTATTAAAAAGCTGATCACAGGGTGTGCTACAATATTGTT
GTGGAACGGGGGGGTGTATCACCTTATTTCACCCATTTTACGGTCGTATT
TTTCGAGCTAAAAAACTACCTAGACGGTGTGGTGGGTATACTGCTGTGGA
GAGTTTGCCGGATTTGTTGCCTTCTGTTCGTATTTTCTGTACGTATCTTA
TCTTGTGCCACCTACGGTAGTTGGGTTAAGGTGCGCACCGCAGATAACAT
GATCACATTGTCAAGTCATGAAAACAAAGGGTCATAAATGTAGGCCAAAG
GTGGTCGGTCGGTACAAACTTTGTTTCTTTCAAGTGTTGGCGAGATGTCT
GGTGATAGTTTGCCTGACAGTAGTGAGTCCGCCCCCCGCTCCCCGCTCGC
CCCCCCCCCCCCCGGTCTTACGTGCAAATTGCAGGCCGAATATCACAACA
TTAGAAGGGCTCCTTGCGGCGGCGACCATGCTGTCGCATCCCGAGCAGCT
GGAACTTCTAGAAGAGTTGAAAAACATGATCGGCTCCACGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5788:9580..11522-

>mRNA_L-elsbetiae_contig5788.14206.1 ID=mRNA_L-elsbetiae_contig5788.14206.1|Name=mRNA_L-elsbetiae_contig5788.14206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1074bp|location=Sequence derived from alignment at L-elsbetiae_contig5788:9580..11522- (Laminarionema elsbetiae ELsaHSoW15)
CAGACATGGGAGGGATTTATCGGCGCGTTTTTCTTCACGTGTGTCTTCGC
CTTCTACTTCTCTGGCTTCCTGGCCAAGTACGAGTGGTTCACCTGCCCAG
TGCAAGACCTCAACTTCAGGCCGAAGCCGATCCACTGCAAGCCCGACGCG
CTCTTCCTTCCAGCGGAGTTCGTCGTGGTGAGTGAGCGACAGACACAACG
AGAGAGTGCCAGACATGGGAGGGATTTATCGGCGCGTTTTTCTTCACGTG
TGTCTTCGCCTTCTACTTCTCTGGCTTCCTGGCCAAGTACGAGTGGTTCA
CCTGCCCAGTGCAAGACCTCAACTTCAGGCCGAAGCCGATCCACTGCAAG
CCCGACGCGCTCTTCCTTCCAGCGGAGTTCGTCGTGGTGAGTGAGCGACA
GACACAACGAGAGAGTGCCGTCACCATGGCCCCCATCCAGCTCCACGCGC
TGCTAATGGCGACCTTCACGTCGGTCATCGCGCCATTCGGCGGCTATTGG
GCGTCGGCGATAAAGCGCGCGTACGGCATCAAGGACTTCGACTCGATCAT
CCCGGGGCACGGCGGGGTCACGGACCGGATGGACTGCCAGTTCATCACGG
CCCTGTTCGTTTCGGTGCACTACAACACGTTCATCAGCGTCACCATGGCC
CCCATCCAGCTCCACGCGCTGCTAATGGCGACCTTCACGTCGGTCATCGC
GCCATTCGGCGGCTATTGGGCGTCGGCGATAAAGCGCGCGTACGGCATCA
AGGACTTCGACTCGATCATCCCGGGGCACGGCGGGGTCACGGACCGGATG
GACTGCCAGTTCATCACGGCCCTGTTCGTTTCGGTGCACTACAACACGTT
CATCAGGCCGAATATCACAACATTAGAAGGGCTCCTTGCGGCGGCGACCA
TGCTGTCGCATCCCGAGCAGCTGGAACTTCTAGAAGAGTTGAAAAACATG
ATCGGCTCCACGTGAGCCGAATATCACAACATTAGAAGGGCTCCTTGCGG
CGGCGACCATGCTGTCGCATCCCGAGCAGCTGGAACTTCTAGAAGAGTTG
AAAAACATGATCGGCTCCACGTGA
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