mRNA_L-elsbetiae_contig5788.14205.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5788.14205.1
Unique NamemRNA_L-elsbetiae_contig5788.14205.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 4.820e-64
Identity = 198/410 (48.29%), Postives = 229/410 (55.85%), Query Frame = 1 
Query:  277 VLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRST-----------SSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEQCDVLSDLRKEVDALSGEMKTVNGKLDEILSLLLG-TSGNQSRLYHGSSSSNGPARNNIFLHPQNDSN--------GIPTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGIGQAGQDPYVYGAPIGNYTTPLVHVDHHQXXXXXXXXXXXXXQPQ-----------------WHGHYLYSQLCQQPVHAEQHPVAPNQMRYQVVQPPC---------------PGTTAHVSGSTSARQPHQQGPPFHGMPPPPRAETSDNNASPSEHKRVDLGKTSSKVRPPSRKVGSGG 1350
            VLVFEGLLPSYYNH KFLSFVRQLNFYGFKKVK GAS+R R++           S+ A  +++WEEFRH QFRRGRRDLLVGIKRQKD GRLKRKR DS++ D+L+ LR +VD LS +++  NGKLD I+S+L+G TSGN  +         GP  +N+ +H QN  N                XXXXXX                   XXXXXXXXXXXXXXXX  GG +G  GQDPY+YGAPI NY  P    D   XXXXXXXXXXXXX                    W GH LYSQ CQQP  AEQ+PVAPNQ+RYQ+ Q P                P    H S  T      +Q      +PP                 RV   K SSK+RPP+R  GSGG
Sbjct:    9 VLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRTSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLDTIISMLMGATSGNHPQ------QGGGPVHSNLLMHLQNGGNPXXXXXXXXXXXXXXXXXXXXXSSNPASFLPVTTPGTATHGXXXXXXXXXXXXXXXXVRGGNMGPVGQDPYMYGAPISNYMAPRFSTDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQGHQLYSQPCQQPPLAEQYPVAPNQIRYQMAQQPXXXXXXXXXXXXXXTIPAAGVHTSDVTPPTGSSRQ-----QLPP-----------------RVS--KNSSKIRPPNRGSGSGG 388
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BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.290e-45
Identity = 85/131 (64.89%), Postives = 102/131 (77.86%), Query Frame = 1 
Query:  160 NNSSIPVFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKA-GASSRPRST-------SSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRK 528
            N++ IPVFLDRTF  +E+   ++VCWS+ GDSFI+K  +VL FEGLLPSYYNH KFLSFVRQLNFYGFKKV+  GASSR  S        ++ A  + +WEEF+H QFRRGRRDLLVGIKRQKD GR+KR+
Sbjct:   15 NSNHIPVFLDRTFSFIEDTSPDIVCWSEVGDSFIVK--KVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASSRASSXXXXXXXXAAEAEESASWEEFKHPQFRRGRRDLLVGIKRQKDDGRMKRR 143
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 7.910e-45
Identity = 138/363 (38.02%), Postives = 170/363 (46.83%), Query Frame = 1 
Query:  274 RVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSV--------ATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEQCDVLSDLRKEVDALSGEMKTVNGKLDEILSLLLGTSGNQSR------LYHGSSSSNGPARNNIFL----HPQNDSNGIPTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGIGQAGQDPYVYGAPIGNYTTPLVHVDHHQXXXXXXXXXXXXXQPQWHGHYLYSQLCQQPVHAEQHPVAPNQMRYQVVQ--PPCPG----TTAHVSGSTSARQPHQQGPPFHGMPPPPRAETSDNNASPSEHKRV 1290
             VL FEGLLPSYYNH KFLSFVRQLNFYGFKKVK   +SR  S SSV        A  +++W+EFRH +FRRGRRDLL GIKRQKD GR+KRK+ + E+   LS L  +VD +S +++  NGKLD+I+ +L G +G          +  G+    G       +      QN  N   TAG A                                            G   Q G DP VYGAP+    TP + V H Q                W GH  Y Q  Q     E+  VAPNQ+RYQ  Q  P  P       AH S  ++A    QQ PP      PPR +   NN + S H++V
Sbjct:   27 HVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAVAADESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLDDIMLMLSGMAGGNLHSSMIPPVQRGNMGRGGDGSFGFGIGGSSSDQNSYNTAETAGAAAAAFGGDRQQVVGAGSRD--------------------------GSTDQEGHDPSVYGAPLDQRHTPCLPVGHQQQG--------------WQGHGPYPQPHQPSFSTERCLVAPNQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQQLPPLCY---PPRGDG--NNLASSGHEQV 344
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 2.250e-37
Identity = 80/129 (62.02%), Postives = 97/129 (75.19%), Query Frame = 1 
Query:  271 ARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEQCDVLSDLRKEVDALSGEMKTVNGKLDEILSLLLGTSG 657
            ++VL FEGLLPSYYNH  FLSFVRQLNFYGFKKVK GAS   RS SS     ++WEEF H QFR+GRRDLLV IKRQKD G LKRK+ D  + D+L+ L  EV ++  +++  NGKLD++LSLL G +G
Sbjct:   11 SKVLAFEGLLPSYYNHKNFLSFVRQLNFYGFKKVKGGAS---RSESS-----DSWEEFMHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLDDVLSLLSGITG 131
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BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 3.180e-35
Identity = 73/102 (71.57%), Postives = 80/102 (78.43%), Query Frame = 1 
Query:  265 KQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRST-----------SSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRKRVD 537
            K  +VLVFEGLLPSYYNH KFLSFVRQLNFYGFKKVK GAS+R RS+           S+ A  +++WEEFRH QFRRGRRDLLVGIKRQKD GRLKRKR D
Sbjct:   36 KHWQVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRSSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRDD 137
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: H3GSF4_PHYRM (HSF_DOMAIN domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSF4_PHYRM)

HSP 1 Score: 110 bits (275), Expect = 1.970e-22
Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 1 
Query:  178 VFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRKR-VDSEQCDVLSDLRKEVDALSGEM---KTVNGKLDEILSLLL 645
            VFL++T+ ++E  P EV CW+  G+SF++KQ      E ++P+Y+ H KF SFVRQLN YGF+KV+A       +T     + + W EFRH +F RGRRDLL  I+R+  S  +     VD  +   L +LR EV AL  EM   K  N +L  +L  LL
Sbjct:   46 VFLEKTYELLERCPPEVACWTPRGESFVVKQPAAFA-EHVIPTYFKHRKFSSFVRQLNLYGFRKVRASVED---ATGDEDASPKDWWEFRHDRFVRGRRDLLCEIRRRSGSTPVGAGTPVDRVE---LEELRAEVGALRDEMHKMKKTNQQLAGLLQTLL 198
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: A0A833T5E4_PHYIN (HSF-type DNA-binding n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T5E4_PHYIN)

HSP 1 Score: 100 bits (249), Expect = 2.790e-21
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 1 
Query:  166 SSIPVFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRGRRDLLVGIKR----QKDSGRLKRKRVDSEQCDV 555
            S+ PVFL +T+ M+E+ P  V CWS++G SFIIK  R    + +LP Y+ HN F SFVRQLNFYGF+K K          S+    +++W EF H +F RGR++L+  I+R    +  S   +R R  S QC V
Sbjct:   22 SAAPVFLQKTYDMIESSPSTVACWSESGTSFIIKLPREFA-KTMLPRYFKHNNFSSFVRQLNFYGFRKHKKDEIV----ISTEEDESKSWWEFYHEKFLRGRQELMAQIRRKTYSEPASPTTRRWRRSSSQCRV 150
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BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.610e-21
Identity = 56/156 (35.90%), Postives = 90/156 (57.69%), Query Frame = 1 
Query:  175 PVFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEQCDVLSDLRKEVDALSGEMKTVNGKLDEILSLL 642
            PVFL +T++M+++ P EV  WS AGD+FI+K      F  LLP ++ H  F SFVRQLNFYGF+K++   +        ++     W EFRH +F RG+ +LL  IKR         +   ++Q +++ DL+ EV  L   +  ++  ++++ SL+
Sbjct:   58 PVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEA--FANLLPRFFKHKNFRSFVRQLNFYGFRKLRTDGAL-------ISDRPSNWWEFRHEKFLRGKPELLTHIKRANHY-----ETAPADQVELVEDLKSEVFQLRERIDDMSSTIEKLTSLV 199
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: A0A3M6VU76_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU76_9STRA)

HSP 1 Score: 102 bits (254), Expect = 7.310e-21
Identity = 55/117 (47.01%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:  148 DSFNNNSSIPVFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRGRRDLLVGIKR 498
            DS    S+ PVFL +T+ M+E+ P  V CWSDAG SFIIK  R    + +LP Y+ HN F SFVRQLNFYGF+K K          S     ++ W EF H +F RGR++L+  I+R
Sbjct:   16 DSNGGGSAAPVFLQKTYDMIESSPSAVACWSDAGTSFIIKLPREFA-KTMLPRYFKHNNFSSFVRQLNFYGFRKHKKDEIV----ISVEMDESKNWWEFYHEKFVRGRQELMAQIRR 127
[Close]
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Match: W2PP33_PHYPN (HSF_DOMAIN domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PP33_PHYPN)

HSP 1 Score: 105 bits (262), Expect = 1.080e-20
Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 1 
Query:  178 VFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNHNKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRGRRDLLVGIKRQKDSGRLKR--------KRVDSEQCDV-LSDLRKEVDALSGEMKTVNGKLDEILSLLLGT 651
            +FL++T+ ++E  P E+  W+  GDSF++KQ      E ++P+Y+ H KF SFVRQLN YGF+KV+A ++S          + + W EFRH +F RGRRDLL  I+R+  S             +RV+ E+    +S LR+E+  +    + + G L  +L    G+
Sbjct:   54 LFLEKTYELLERCPPELASWTAKGDSFVVKQPAAFA-EHVIPTYFKHRKFSSFVRQLNLYGFRKVRATSASTVEDAEEEDASPKDWWEFRHERFVRGRRDLLCEIRRRSPSDARASTPLAGTPVERVEFEELRAEVSGLREEMHKMQKSNQQLTGLLQNLLQRFSGS 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5788.14205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDD9_9PHAE4.820e-6448.29HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7G9I4_ECTSI2.290e-4564.89N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7FV29_ECTSI7.910e-4538.02Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
D7G1S0_ECTSI2.250e-3762.02HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7G1S2_ECTSI3.180e-3571.57Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
H3GSF4_PHYRM1.970e-2242.50HSF_DOMAIN domain-containing protein n=1 Tax=Phyto... [more]
A0A833T5E4_PHYIN2.790e-2143.28HSF-type DNA-binding n=1 Tax=Phytophthora infestan... [more]
A0A7S2WDE9_9STRA3.610e-2135.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3M6VU76_9STRA7.310e-2147.01HSF_DOMAIN domain-containing protein n=1 Tax=Peron... [more]
W2PP33_PHYPN1.080e-2035.93HSF_DOMAIN domain-containing protein n=11 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5788contigL-elsbetiae_contig5788:1928..7347 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.1
Seed ortholog evalue6.1e-34
Seed eggNOG ortholog2880.D7G1S0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5169@1,KOG0627@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1393
Cds size1374
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5788.14205.1prot_L-elsbetiae_contig5788.14205.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5788 1928..7329 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816620.719704-CDS-L-elsbetiae_contig5788:1927..22001622816620.719704-CDS-L-elsbetiae_contig5788:1927..2200Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 1928..2200 -
1691683690.4510376-CDS-L-elsbetiae_contig5788:1927..22001691683690.4510376-CDS-L-elsbetiae_contig5788:1927..2200Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 1928..2200 -
1622816620.7308254-CDS-L-elsbetiae_contig5788:2930..35171622816620.7308254-CDS-L-elsbetiae_contig5788:2930..3517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 2931..3517 -
1691683690.466486-CDS-L-elsbetiae_contig5788:2930..35171691683690.466486-CDS-L-elsbetiae_contig5788:2930..3517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 2931..3517 -
1622816620.741462-CDS-L-elsbetiae_contig5788:4306..44801622816620.741462-CDS-L-elsbetiae_contig5788:4306..4480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 4307..4480 -
1691683690.4760883-CDS-L-elsbetiae_contig5788:4306..44801691683690.4760883-CDS-L-elsbetiae_contig5788:4306..4480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 4307..4480 -
1622816620.752701-CDS-L-elsbetiae_contig5788:4776..48581622816620.752701-CDS-L-elsbetiae_contig5788:4776..4858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 4777..4858 -
1691683690.4855914-CDS-L-elsbetiae_contig5788:4776..48581691683690.4855914-CDS-L-elsbetiae_contig5788:4776..4858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 4777..4858 -
1622816620.765899-CDS-L-elsbetiae_contig5788:7071..73291622816620.765899-CDS-L-elsbetiae_contig5788:7071..7329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 7072..7329 -
1691683690.5023541-CDS-L-elsbetiae_contig5788:7071..73291691683690.5023541-CDS-L-elsbetiae_contig5788:7071..7329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5788 7072..7329 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816620.779344-UTR-L-elsbetiae_contig5788:7329..73471622816620.779344-UTR-L-elsbetiae_contig5788:7329..7347Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5788 7330..7347 -
1691683690.5136948-UTR-L-elsbetiae_contig5788:7329..73471691683690.5136948-UTR-L-elsbetiae_contig5788:7329..7347Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5788 7330..7347 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5788.14205.1

>prot_L-elsbetiae_contig5788.14205.1 ID=prot_L-elsbetiae_contig5788.14205.1|Name=mRNA_L-elsbetiae_contig5788.14205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=458bp
MTNDNSDADTDHRNDGGSRFSLSPGAAADGAEADDPGVAEEEEDSFNNNS
SIPVFLDRTFRMVENVPDEVVCWSDAGDSFIIKQARVLVFEGLLPSYYNH
NKFLSFVRQLNFYGFKKVKAGASSRPRSTSSVATAAETWEEFRHSQFRRG
RRDLLVGIKRQKDSGRLKRKRVDSEQCDVLSDLRKEVDALSGEMKTVNGK
LDEILSLLLGTSGNQSRLYHGSSSSNGPARNNIFLHPQNDSNGIPTAGGA
GGGLGFGGGGSTGTPYMAAAAPATAIRCAGAGAGGLRWRWRGVGGGIGQA
GQDPYVYGAPIGNYTTPLVHVDHHQQQQQQQQQQPRQQQPQWHGHYLYSQ
LCQQPVHAEQHPVAPNQMRYQVVQPPCPGTTAHVSGSTSARQPHQQGPPF
HGMPPPPRAETSDNNASPSEHKRVDLGKTSSKVRPPSRKVGSGGGSGDSS
SSSAIGEP
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mRNA from alignment at L-elsbetiae_contig5788:1928..7347-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5788.14205.1 ID=mRNA_L-elsbetiae_contig5788.14205.1|Name=mRNA_L-elsbetiae_contig5788.14205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5420bp|location=Sequence derived from alignment at L-elsbetiae_contig5788:1928..7347- (Laminarionema elsbetiae ELsaHSoW15)
GAGCGCAACGACCAAAACATGACCAACGACAACAGCGACGCGGACACAGA
TCACCGCAACGACGGTGGATCGCGATTCTCGCTATCCCCCGGAGCTGCAG
CTGATGGAGCTGAAGCCGATGATCCCGGGGTTGCGGAGGAGGAGGAGGAC
TCGTTCAACAACAACAGTAGTATTCCTGTTTTTTTGGACCGCACCTTCCG
GATGGTCGAAAACGTGCCTGACGAAGTTGTTTGTTGGTCGGACGCGGGAG
ATTCGTTCATCATCAAACAGGCAAGAGTGCGAGAGAAGGCGGAGTGTGCA
GGAGATGAGCGCCGCGCACCTCTCCTGTTGCGACTTGCGAGACCTCGGCG
AAGTTGCGGCTCACAATAATGCCAAGGTTGCGGCTCACAAAAATTCGCCT
TTTTTCGAACGTTCGTTTCGTATCTACAAGTATATGTTGACCTTGTTGCA
TGTGCTGTGTGTGTGTGTATCTGCTACGTACGTATATGCGTAACGGAGAG
CCAGCTGCTGCTGGCACAGGTACGGCGGTACGTAGCTATGTTTTAAGACT
GTGCGGGGACTAGACATGTTCGGTGGCTGATCTCTCTCTCGCGCGCCCCT
CGCCCACTGGACCTACTACCGGGGGCCGTTTTTTTTTTTGTGCATTGATG
TGCAACCAAAAATTACTCGGTGCGTGCGGCCAAGCAGATGCTCGATGTAG
GTTGTTCACGACGGCACACATATCGATACGTAGCTGGAAACAGCGCCCCG
CGAAGCCTAACTTAGTAGAGGGGCGGTTCGCGACGTTCCTCTCGGGGGCA
CAGTGCGGAAATGCGGGGAAATACCTGTGCTTGGTGGGAAAAGGGTGGTA
TTCTTCAAACTCCGTGATCCTCTTTTGTCGCCTGCTTCGCGCTGAGCCTT
CCTTAGCCTTCCCATCGCACCTTATCCCATAAAACAGGCCATTCGCCGAC
TTGGGTATATCTAGTGTATAAGCTCAAGTAATAGGGCCACGATCTTGTGG
CAACGAAAAATTGCCACACGAAATGAAATTTTTGTTCTTTCTGCGGGAGA
TTCGAAAAATTTCTTGGGTCGCCCACCAAAACCACGGCGACACTGCTGCC
TCAGGCTTGTAGCTCGCGGGTTGCCACGAGACCTTCTAGGCTGTACGCTG
ATACCTATGGGAGTCTTGGGATATTATTTTCCTGGTCATAGGCTTGTGGC
TCGCCGAGGGGTACTTGGCGTGCGACCTCATATTTTGGTTGTGACAAATC
CGTCCGCGAAATGACCACGTTTTGTTGCATGATATGATTTCGTGTGTGTG
ACGTTTTGCCAGGCGGGTCTGTCTGTATTTTCTCCACGACCACGCCACAA
AAAACAAACGAACGCCTGGTAGCTGCAAATAATCGCACGAGCATGGAGCG
TAGGCCTCCAAGGTTTATATAATGGCAATCAGCGAAATCACTGGCCGGGG
ATTTACTACATGGCTGATGGGTATGTGGTGAAAAGTCTCCATTTCGTGGG
GCTCGAGGCCCCAACACCCCCCCTTCGATTCAGGGGCCCGCGCCTAAATC
AAAAAATCCGTTTCGTGCTGCCATAAACTCCGACCCTCAAGCCACGTAGA
CTAGATTATATGACAAAGAGAACACAACCGTGTCATACAGAGACTAACGT
TTTTGAGTTTAAAAAACACATCACACGTGGTGCGCTATGTGATGTGTTAT
CTTGTGGCAGCCCCATATTACTTCAGAGTACTTTCTTGTCGGTCACCGCA
TGCGTCTACAATACATATTATTATCGAAACTAACACTCCTTTCGCACGCG
GTGTGGTATCGTGGAGAGGTATAAGTTGTTTTGGGGGTGCCTTTTTTACA
TAGATAGGGAGATATGTAAACTGGGAAGAGACAGGATCTCCCCCCGCCAA
AAAGCGGGCGCGGGGGCCCGAATGACAAGTATTTTCTGAAACGGCAGGAG
AAAGCGGCGCGACCTGCTTGTAGTTCCGGAAATTTCGGGAGTATCATATA
TTGTAGTTGCCTTTTGCCTCTTCGCCACCTGCGCAATGGCTGTGAGGTCG
ATATTGTTCGACGTGAGGAGGTCTCGGAGTCCATGGTATGGGGTAATGGT
GAGCGACATGGTGCAGAGAGCAAAAAAAGTGGCGGAAGAGAGTCGGATCG
AAAGATTGAGTGTGTCGGGCACCACGAAGAACGGAAATTCATAATACATG
GAACGTAACATCCAGTTGCGCCGCGTGTGTTGCAGGAAATGCTAGTATTA
CATGAACAGAGGATACCTGTTATCTCTCATGTGATGCCTACATAAACGTT
CTAGCCACTTATTTACTGCGTTCCCGAAAAAGAGACTAAAGGGACTTTGG
CGAAGGGCCCGCTTTGTTGGTGGGTGTTCGGTGGTCGGTGGTTCATCTAG
TGACCCGCGCTATTCGCAAAAAGTCGGTGAACGCTCATCTCCTCCTCTGT
GTCCATCTCGTCTCATTGTATCCTTCTATCTATGTGCAGGTCCTGGTGTT
CGAGGGGCTCCTTCCGTCTTACTACAACCACAATAAGTTCCTGTCTTTCG
TTCGGCAGCTCAACTTTTACGGTGAGTGATCCTCCGTATGTGGTTATCGG
TTGTGCTTTCGAGGGGGGCTGTTTTGGCGCTGGGGGCGGGTGGATGCACG
CGCTCGCTGCGGGCGTTGTGCGGCCTTCTCTTTCAAGCAGAACAGCGTCA
CCCGCGAACACGCGTTCTGGCGGCGTTGTCGGGTGATGTTGTTCAGGAGC
ACTACGCTGTAGCTGTTAACATGCCCGACCGAGCGGATCGCCGAACCTGA
GAAGGTTTGATCTTGTTCCTCCTGCTTGTTCGTTTCGATGCTTGTTTGTT
TGTTTTATTTTCGCCAGGCTTCAAGAAGGTTAAGGCAGGGGCGTCTTCAC
GCCCGAGGTCCACCAGCAGCGTCGCAACGGCGGCAGAGACGTGGGAGGAG
TTCAGGCACTCGCAGTTTCGCCGAGGCCGCAGAGATCTCCTGGTCGGCAT
CAAGCGGCAGAAGGACTCTGGACGTTTGAAGCGTAAAAGAGGTGTGGCTT
CAGAGGGTGCGCATGATACGATGCGGTATACGGCACCGGTTACCCCAGTA
CGACGAGAGTGTCCAGCAACAGTAGTATCTAGTGAAGCATAAAATAAAAC
ATAAAAAAAGCGTCTTCTTTCTTCTTTTGGCATTTTCTCGGTTGAAGGGT
GAAGGTTTCGGCGTCGGGAGGCACACAAACTACATGTCATACTTTTGTGA
GACAAACTACCGCAGTAGCGGCGAGCGTTCAAGGCAAATGGGCTACATAG
CTTGTTCAGGGATGAAAAAACCAAACTGGCCGGGATGTTATGGCGTACAT
ACTTGTGTACCTCTTTTTAGTACAAAGAGGAGTGTGGGATGAACCTCTGA
AGCTTGCGCCGTGATCGATGGATGGCTCTGGTTAGGGTGTCATCTTGATT
CACTCGCACCCCATCCACCCCATTCGTATTCACAAACAAGCCCATCGCGG
AAATCATGGCTCATTCACCGTACCTGCTACCGTCTTTGACCAGCTTGGTG
GAGTAAATACCTGCGGGGGGTTTATTTATTTATACCCATCGCGACGCGCC
GATTTCACGTCGTAGCTTGGCGCACTACGCAGACTTCCCCTTCCACTGCA
CGGGTTTAGCCATCAAGCTCTAGCGCATCTGTACACACGACAACAACTTT
GCCAACATCGTGTTGTAGTATCATGCGCGTGCTCTCTCCGTCCCATCCTG
CGATCGTTACATTTTTCTCCCCCACCACCACCACTGCGATCATCTATGCC
TGTTTTCCTGATGGTCTGTGCCCTCGGCAGTCGATTCGGAGCAGTGCGAT
GTCCTGAGCGACCTCAGGAAGGAGGTGGACGCATTGAGCGGCGAGATGAA
GACGGTGAACGGCAAGCTCGACGAAATCTTGTCGCTGCTACTGGGCACAT
CCGGCAATCAGAGCCGGCTCTACCACGGTAGTAGTAGTAGTAATGGACCC
GCCCGAAACAACATCTTCCTGCACCCACAGAACGACAGCAACGGCATCCC
CACTGCTGGTGGTGCTGGCGGTGGGCTAGGCTTCGGCGGTGGTGGCAGCA
CTGGAACCCCGTACATGGCAGCGGCAGCCCCGGCCACCGCCATTCGTTGC
GCTGGTGCTGGTGCTGGTGGGTTACGATGGCGGTGGAGAGGTGTAGGCGG
CGGTATCGGCCAAGCCGGCCAAGACCCGTACGTATACGGGGCGCCAATCG
GCAACTATACGACTCCACTCGTTCATGTGGACCACCACCAACAGCAGCAG
CAGCAGCAACAGCAGCAACCGCGGCAACAACAACCGCAGTGGCATGGCCA
CTATCTCTACTCGCAGTTATGCCAGCAGCCTGTTCACGCAGAGCAACACC
CGGTGGCACCAAATCAGGTGAGCGAGCAAACCAAGAGCAGACGGTACCGC
TAGAAAAAGAACCTAGAAGCCATGTTGCTTCCGCGACGTCTGTTCGGCTC
TTCCTTCTAAAGATGAGTTGGTCACCAAGACAAAACAAAATGTGCGGTCG
CCGTCTTCTTGCGACAGTTACCGGCGCCAGTGTGTACCTGCGGGTCACGA
ATCAATGAACATACAAGCAACAGACGCACGGGTTGTCCTGACAGTAGTAG
TAGGTGAGATGAAAAATTCGATCAAAAGTTGACGATACATAGGCCCTTCA
TTTTCGTCTCGTGGGGTGAAAACTAACAGGCCAGGTATTGGCGTTAGTAT
TATTTGGCGTGACAGATGCCGATTGTGCAGATGAAAAGTCGATCTGATTC
CGGCCGCGACGGGTAGTACCACTTGAGAGATAAACGATGTTAGACCTGCT
GTCGGTTTTCTGGTTTCTCCATAGAGGGTGCGATCTGTCACGTGCGTGCG
CGCGAGTGAAGGGTAAATAGGCGGTGCACTGCCCCAAAGTGCAGCCGGCA
GCCCGTGCTCGATCGTGCTTTCATTACGCTCCTTGCTGTCCGATGTATGT
AGTTTATTGTACATACGTGACATACTTACTGATCTTGGCAGTATTGTTGG
TAAATGTATGCATAGTTGCGCCAAGAAGCTACTACTACCACCCTTGGACG
AGAAGTTCGCTGACGCACACGAACTTTATGCCCATCTCTTTGCTCAGATG
CGATACCAGGTGGTGCAACCGCCATGTCCAGGCACGACAGCGCACGTTTC
TGGAAGCACTTCTGCTCGGCAGCCTCATCAGCAGGGTCCGCCGTTCCATG
GAATGCCGCCGCCACCACGAGCGGAGACGTCCGATAACAACGCTTCTCCG
TCCGAGCACAAGCGAGTTGATTTGGGGAAGACATCATCCAAGGTTCGCCC
ACCGAGTCGAAAAGTTGGGAGCGGCGGTGGCAGCGGTGACTCTTCTTCTT
CCTCGGCCATCGGTGAACCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5788:1928..7347-

>mRNA_L-elsbetiae_contig5788.14205.1 ID=mRNA_L-elsbetiae_contig5788.14205.1|Name=mRNA_L-elsbetiae_contig5788.14205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2748bp|location=Sequence derived from alignment at L-elsbetiae_contig5788:1928..7347- (Laminarionema elsbetiae ELsaHSoW15)
ATGACCAACGACAACAGCGACGCGGACACAGATCACCGCAACGACGGTGG
ATCGCGATTCTCGCTATCCCCCGGAGCTGCAGCTGATGGAGCTGAAGCCG
ATGATCCCGGGGTTGCGGAGGAGGAGGAGGACTCGTTCAACAACAACAGT
AGTATTCCTGTTTTTTTGGACCGCACCTTCCGGATGGTCGAAAACGTGCC
TGACGAAGTTGTTTGTTGGTCGGACGCGGGAGATTCGTTCATCATCAAAC
AGGCAAGAATGACCAACGACAACAGCGACGCGGACACAGATCACCGCAAC
GACGGTGGATCGCGATTCTCGCTATCCCCCGGAGCTGCAGCTGATGGAGC
TGAAGCCGATGATCCCGGGGTTGCGGAGGAGGAGGAGGACTCGTTCAACA
ACAACAGTAGTATTCCTGTTTTTTTGGACCGCACCTTCCGGATGGTCGAA
AACGTGCCTGACGAAGTTGTTTGTTGGTCGGACGCGGGAGATTCGTTCAT
CATCAAACAGGCAAGAGTCCTGGTGTTCGAGGGGCTCCTTCCGTCTTACT
ACAACCACAATAAGTTCCTGTCTTTCGTTCGGCAGCTCAACTTTTACGGT
CCTGGTGTTCGAGGGGCTCCTTCCGTCTTACTACAACCACAATAAGTTCC
TGTCTTTCGTTCGGCAGCTCAACTTTTACGGCTTCAAGAAGGTTAAGGCA
GGGGCGTCTTCACGCCCGAGGTCCACCAGCAGCGTCGCAACGGCGGCAGA
GACGTGGGAGGAGTTCAGGCACTCGCAGTTTCGCCGAGGCCGCAGAGATC
TCCTGGTCGGCATCAAGCGGCAGAAGGACTCTGGACGTTTGAAGCGTAAA
AGAGGCTTCAAGAAGGTTAAGGCAGGGGCGTCTTCACGCCCGAGGTCCAC
CAGCAGCGTCGCAACGGCGGCAGAGACGTGGGAGGAGTTCAGGCACTCGC
AGTTTCGCCGAGGCCGCAGAGATCTCCTGGTCGGCATCAAGCGGCAGAAG
GACTCTGGACGTTTGAAGCGTAAAAGAGTCGATTCGGAGCAGTGCGATGT
CCTGAGCGACCTCAGGAAGGAGGTGGACGCATTGAGCGGCGAGATGAAGA
CGGTGAACGGCAAGCTCGACGAAATCTTGTCGCTGCTACTGGGCACATCC
GGCAATCAGAGCCGGCTCTACCACGGTAGTAGTAGTAGTAATGGACCCGC
CCGAAACAACATCTTCCTGCACCCACAGAACGACAGCAACGGCATCCCCA
CTGCTGGTGGTGCTGGCGGTGGGCTAGGCTTCGGCGGTGGTGGCAGCACT
GGAACCCCGTACATGGCAGCGGCAGCCCCGGCCACCGCCATTCGTTGCGC
TGGTGCTGGTGCTGGTGGGTTACGATGGCGGTGGAGAGGTGTAGGCGGCG
GTATCGGCCAAGCCGGCCAAGACCCGTACGTATACGGGGCGCCAATCGGC
AACTATACGACTCCACTCGTTCATGTGGACCACCACCAACAGCAGCAGCA
GCAGCAACAGCAGCAACCGCGGCAACAACAACCGCAGTGGCATGGCCACT
ATCTCTACTCGCAGTTATGCCAGCAGCCTGTTCACGCAGAGCAACACCCG
GTGGCACCAAATCAGTCGATTCGGAGCAGTGCGATGTCCTGAGCGACCTC
AGGAAGGAGGTGGACGCATTGAGCGGCGAGATGAAGACGGTGAACGGCAA
GCTCGACGAAATCTTGTCGCTGCTACTGGGCACATCCGGCAATCAGAGCC
GGCTCTACCACGGTAGTAGTAGTAGTAATGGACCCGCCCGAAACAACATC
TTCCTGCACCCACAGAACGACAGCAACGGCATCCCCACTGCTGGTGGTGC
TGGCGGTGGGCTAGGCTTCGGCGGTGGTGGCAGCACTGGAACCCCGTACA
TGGCAGCGGCAGCCCCGGCCACCGCCATTCGTTGCGCTGGTGCTGGTGCT
GGTGGGTTACGATGGCGGTGGAGAGGTGTAGGCGGCGGTATCGGCCAAGC
CGGCCAAGACCCGTACGTATACGGGGCGCCAATCGGCAACTATACGACTC
CACTCGTTCATGTGGACCACCACCAACAGCAGCAGCAGCAGCAACAGCAG
CAACCGCGGCAACAACAACCGCAGTGGCATGGCCACTATCTCTACTCGCA
GTTATGCCAGCAGCCTGTTCACGCAGAGCAACACCCGGTGGCACCAAATC
AGATGCGATACCAGGTGGTGCAACCGCCATGTCCAGGCACGACAGCGCAC
GTTTCTGGAAGCACTTCTGCTCGGCAGCCTCATCAGCAGGGTCCGCCGTT
CCATGGAATGCCGCCGCCACCACGAGCGGAGACGTCCGATAACAACGCTT
CTCCGTCCGAGCACAAGCGAGTTGATTTGGGGAAGACATCATCCAAGGTT
CGCCCACCGAGTCGAAAAGTTGGGAGCGGCGGTGGCAGCGGTGACTCTTC
TTCTTCCTCGGCCATCGGTGAACCGATGCGATACCAGGTGGTGCAACCGC
CATGTCCAGGCACGACAGCGCACGTTTCTGGAAGCACTTCTGCTCGGCAG
CCTCATCAGCAGGGTCCGCCGTTCCATGGAATGCCGCCGCCACCACGAGC
GGAGACGTCCGATAACAACGCTTCTCCGTCCGAGCACAAGCGAGTTGATT
TGGGGAAGACATCATCCAAGGTTCGCCCACCGAGTCGAAAAGTTGGGAGC
GGCGGTGGCAGCGGTGACTCTTCTTCTTCCTCGGCCATCGGTGAACCG
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