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Homology
BLAST of mRNA_L-elsbetiae_contig5781.14199.1 vs. uniprot
Match: A0A7S1TQF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQF6_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.010e-27 Identity = 75/195 (38.46%), Postives = 104/195 (53.33%), Query Frame = 1
Query: 1 MADVEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGGRANIHEDLQGRLGQAAVNLAFASIIQGRAKVASEGFRGRKHRNTTRSSPAGAEHTAVKSKLTYPEFLDALVVLGERMYRVSRSQPAEGGNSAMRDGNCDRSVESTFQQLLMEHILPLASRRRPTSISDAIRDPLVRDLLQHYKPALREIF 585
MA +E ELWNIFTFY+L GNPLD R+S LRLA+DC +++ +++++ L A VNL FA+ Q K A S + A ++ KLTY EFL+ L+ + +R+Y SQ E Q+LLME++LP ASRR P S+S +R R+L +YK AL+EIF
Sbjct: 58 MAGIEAELWNIFTFYSLHGNPLDPERMSGQLMLRLAKDCDVLE---PHLYDN---PLSAADVNLIFAAEAQRSRKAADAAHE--------LESASTAHGSSANLKLTYYEFLNVLLRISQRLYGHKLSQ------------------EDAMQKLLMENVLPRASRRNPASVSRILRSAAFRNLYDYYKGALKEIF 220
BLAST of mRNA_L-elsbetiae_contig5781.14199.1 vs. uniprot
Match: A0A7S1C9I7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9I7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.040e-20 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 1
Query: 10 VEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGGRANIHEDLQGRLGQAAVNLAFASIIQGRAKVASEGFRGRKHRNTTRSSPAGAEHTAVKSKLTYPEFLDALVVLGERMYRVSRSQPAEGGNSAMRDGNCDRSVESTFQQLLMEHILPLASRRRPTSISDAIRDPLVRDLLQHYKPALREIF 585
VE+ELWNIFTFYTL GNPLD L TQF++LARD +IV G +A +N+A+ + ++ R G + ++TY +FL AL+ + ++Y + S V+ FQQLLMEH+LPLASRR P ++ + + V+ + ++Y AL IF
Sbjct: 6 VEQELWNIFTFYTLHGNPLDPEHLRATQFVKLARDTRIVGGTGVR----------EADINVAYTAEVK-------------------RKDRRGVQ------RMTYNDFLTALMKVSTKVYPDAPS------------------VDDAFQQLLMEHVLPLASRRCPDNVEVFLNNEEVQAMFEYYADALEAIF 144
BLAST of mRNA_L-elsbetiae_contig5781.14199.1 vs. uniprot
Match: F0YBC1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC1_AURAN) HSP 1 Score: 87.4 bits (215), Expect = 1.630e-16 Identity = 69/218 (31.65%), Postives = 103/218 (47.25%), Query Frame = 1
Query: 4 ADVEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGG-RANIHEDLQGRLGQAAVNLAFASII-QGRAKVA---SEGFRGRKHRNTTRSSPAGAEHTAVKSK---LTYPEFLDALVVLGERMYRVS----------------RSQPAEGGNSAMRDGNCDRSVESTFQQLLMEHILPLASRRRPTSISDAIRDPLVRDLLQHYKPALREIF 585
A +E +LW +FTFYT+RGN D RL+ RL +DCQ+ N + Q + AA+ QG K A S+ F + +R + G+ + + LT+ EFL+ALV+ ER++ V R +P G A + RS E F++LLME +LPLASRR P + A+ D V ++ ++ L E+F
Sbjct: 6 ASIEGQLWLVFTFYTIRGNASDPERLTAAALSRLCKDCQMYSKAVHGNAISERQVEVACAALRRRSVDRARQGAVKQALGDSDAFGAEREVYRSRGARGGSGLSHAEGAWRGLTFREFLNALVLFAERLFPVEGSDRDRAMTELAALEERGKPRSGTYVAASQRS--RSREEAFERLLMECVLPLASRRVPAELGGALDDADVLEIRDAFEDELFELF 221
BLAST of mRNA_L-elsbetiae_contig5781.14199.1 vs. uniprot
Match: A0A5A8D6G0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D6G0_CAFRO) HSP 1 Score: 69.7 bits (169), Expect = 1.660e-10 Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 1 MADVEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGGRANIHEDLQGRLGQAAVNLAFASIIQGRAKVASEGFRGRKHRNTTRSSPAGAEHTAVKSKLTYPEFLDALVVLGERMY 369
MA VE++LWNIFT+YTL GNPLD + QF++ + CQIV G + E L A V +A+ + ++ R PAG T K+ + +FL AL+ L R+Y
Sbjct: 1 MASVEQKLWNIFTYYTLHGNPLDPEHMRSQQFVKFCKTCQIVGSGTSTAAEPLV----VADVVVAYTAEVK-------------------RKRPAGTPRTG--QKMDFSDFLTALMKLSARVY 98
BLAST of mRNA_L-elsbetiae_contig5781.14199.1 vs. uniprot
Match: A0A812QPX7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QPX7_9DINO) HSP 1 Score: 61.6 bits (148), Expect = 9.520e-8 Identity = 39/123 (31.71%), Postives = 57/123 (46.34%), Query Frame = 1
Query: 1 MADVEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGGRANIHEDLQGRLGQAAVNLAFASIIQGRAKVASEGFRGRKHRNTTRSSPAGAEHTAVKSKLTYPEFLDALVVLGERMY 369
+ VE+ELWNIFTFY+L GNPLD + TQF+R ARD G +G+ A + A ++ +VA RK R + ++ Y +FL ++ L R+Y
Sbjct: 8 VGTVEQELWNIFTFYSLNGNPLDPGHIRQTQFVRFARDV---------------GMVGEDATSEALTPLVDANIEVAYTAQVNRKSRKGPK-------------RMNYHDFLTTIMKLASRVY 102
BLAST of mRNA_L-elsbetiae_contig5781.14199.1 vs. uniprot
Match: A0A836CLH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.610e-7 Identity = 34/90 (37.78%), Postives = 46/90 (51.11%), Query Frame = 1
Query: 7 DVEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGGRANIHEDL---------------------QGRLGQAAVNLAFASIIQ 213
+VE+ELW+IFTFYT+ GNPL LS T LRL +DCQ++D A Q L A V+LAFA++++
Sbjct: 20 EVEQELWHIFTFYTIHGNPLHPLHLSGTPLLRLTKDCQLLDTAAAXXXXXXXXXXXRTLSTAAQPHLSAAVAQRVLSTADVHLAFAAVVR 109
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 87.8 |
Seed ortholog evalue | 6.1e-15 |
Seed eggNOG ortholog | 44056.XP_009037631.1 |
KEGG ko | ko:K19525 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization |
EggNOG OGs | COG5043@1,KOG1809@2759 |
COG Functional cat. | U |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000 |
Ec32 ortholog description | Hypothetical protein |
Ec32 ortholog | Ec-21_001240.1 |
Exons | 5 |
Model size | 588 |
Cds size | 588 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816620.3554056-CDS-L-elsbetiae_contig5781:3396..3480 | 1622816620.3554056-CDS-L-elsbetiae_contig5781:3396..3480 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 3397..3480 + |
1691683690.2262604-CDS-L-elsbetiae_contig5781:3396..3480 | 1691683690.2262604-CDS-L-elsbetiae_contig5781:3396..3480 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 3397..3480 + |
1622816620.3662183-CDS-L-elsbetiae_contig5781:5368..5451 | 1622816620.3662183-CDS-L-elsbetiae_contig5781:5368..5451 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 5369..5451 + |
1691683690.2404585-CDS-L-elsbetiae_contig5781:5368..5451 | 1691683690.2404585-CDS-L-elsbetiae_contig5781:5368..5451 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 5369..5451 + |
1622816620.3785794-CDS-L-elsbetiae_contig5781:5505..5563 | 1622816620.3785794-CDS-L-elsbetiae_contig5781:5505..5563 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 5506..5563 + |
1691683690.2505178-CDS-L-elsbetiae_contig5781:5505..5563 | 1691683690.2505178-CDS-L-elsbetiae_contig5781:5505..5563 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 5506..5563 + |
1622816620.3894346-CDS-L-elsbetiae_contig5781:5951..6185 | 1622816620.3894346-CDS-L-elsbetiae_contig5781:5951..6185 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 5952..6185 + |
1691683690.2649353-CDS-L-elsbetiae_contig5781:5951..6185 | 1691683690.2649353-CDS-L-elsbetiae_contig5781:5951..6185 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 5952..6185 + |
1622816620.3996413-CDS-L-elsbetiae_contig5781:6878..7007 | 1622816620.3996413-CDS-L-elsbetiae_contig5781:6878..7007 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 6879..7007 + |
1691683690.2734337-CDS-L-elsbetiae_contig5781:6878..7007 | 1691683690.2734337-CDS-L-elsbetiae_contig5781:6878..7007 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5781 6879..7007 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5781.14199.1 >prot_L-elsbetiae_contig5781.14199.1 ID=prot_L-elsbetiae_contig5781.14199.1|Name=mRNA_L-elsbetiae_contig5781.14199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
MADVEEELWNIFTFYTLRGNPLDLTRLSVTQFLRLARDCQIVDGGRANIH EDLQGRLGQAAVNLAFASIIQGRAKVASEGFRGRKHRNTTRSSPAGAEHT AVKSKLTYPEFLDALVVLGERMYRVSRSQPAEGGNSAMRDGNCDRSVEST FQQLLMEHILPLASRRRPTSISDAIRDPLVRDLLQHYKPALREIFR back to topmRNA from alignment at L-elsbetiae_contig5781:3397..7007+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5781.14199.1 ID=mRNA_L-elsbetiae_contig5781.14199.1|Name=mRNA_L-elsbetiae_contig5781.14199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3611bp|location=Sequence derived from alignment at L-elsbetiae_contig5781:3397..7007+ (Laminarionema elsbetiae ELsaHSoW15) ATGGCCGACGTAGAGGAGGAGTTATGGAACATATTCACGTTCTACACACT
TCGAGGGAATCCTCTGGATCTCACACGGCTGTCGGTACGCCAACTGCATA
ATTCGTGTGTAGGTTGTCTGCCGACCCTCTCTCGTCTTTGTTACTACATA
CTTAGATTGATACTCTCTACTCTACGTACCTGTAATGTTGCCGAATCATG
TTGTGGTCCTCTTTCGTAAGAGCGTCCGGTTGTGGGCAATTTGAATAGCA
CACTTTGACGTTTATCGCATATCGTTTCCTACACGCAGAGGAGAGGCTAC
ATAGGTACTTCTCGCACAGCCAATTAACATTTTAATGTTTCGTGCAACAT
AAAAGGCCTTTCTTGACTCCGGAGCAATTACGATGTATGAATAGTCTACA
ATATTGTAGGGTCTTTCAAGATCAGCCTACGCACGATTGGAAGATGCAGA
TAGGATCGTGCCGCTGTCCATACGCATTTCGAGATCTCCATAGCGTACAG
CGGAGGAAACCACTACTGACGTAGACATTAGTAATATTAACGATTCAGGG
AGATTCAGCCGCAGCTCGGCACACAATAAGTTTTCAGAAGCCAAATCGAA
GCCGCTGTGTGCTCTAACGAGTTCAGTCGTCACAACGCGCCACCCCGGGC
CTCGAGATTCGCCGTGTACATGCTGAGGTATGGCTGCTCGAAGCTGGATT
GTCGCGTCTCCAGTGACGTCATCCGTTCAATTAACAAGCCAGCCCTTTCG
GTTCTTTTCGGAGTGGCTGGAAACGTGGACATTGTTTTGTACTCACTCAC
GCTAACACATGAACAGTTTATTTTTGCTGCATATCATTCTCCGGGGTCAA
TGGGTTTCAGCGCGCCACGTGCGGCCTCGAGACTGGACATGCTGGCCGAG
TTACGCCCGTGTGAAGCCGTCAGCACGCATTCCACTGACTCAATCACAAT
AACAGCAAGACTTGGGTTCCGCCTCTTTCGCGGAGACGCTTAATTTCGCA
CCATTGCGCGTCCTTTCTCCGCACGAACATTTCGGTCGGAAAAAGGGAGT
GCAGCGTGGTGTATCGCACCAGCTTCGGCCTTCAGACTCGCCCTACACGT
CTCGCTTCTCTGGGCTGAAATTTGCATGTCTGATTTCCACGGACGTCAGC
CAAAGTAACAACAAGACTTGGGTTCTGCCTGTTTCGCGGAGACGCTCAAT
TTCGCACCATTGCGCGTCCTTTCTCCGCACGAACGTTTCGGTCGAAAAAA
GGGAGTGCAGCGTGGTGTATCGCACCAGCTTCGGCCTTCAGACTCGCTCG
CCCTACACGTCTCGCTTCTCTGGGCTGAAATTTGCATGTCTGATTGGATA
TTTCAGCCACGAATCGCGAAGACTCTCCGAGGCTTTTCAAAAAATGAACC
GAAAATCTTGAACACAAGATTCAAAACACACTACTTCCGGGCGGAGCTTC
AGACCGAGCTTGACAAAAATATATCCAACCAGCGGCAATACTGACATACA
CAAAATACAGCAGAAGTAGTACAAGCAGCATAGCAGAAACGCCGCGAGAC
AATCAGCAGTCCGCTTGCTGCGGGACAAACGACGTGTTACTGACAGCGAC
GGTTAATCTTTCCCTCGACCGTGTGCGGTGTGGCATAACCACGTTTCGTT
TTGATTATTGATTGCTGTTTGTGGACTTTGAATTTTGTCCGGATTGCATT
TCATTCCCACTTGGCCTGTGTGTATCCCGCTTTCGTCCAACCACAAATAA
ACAACAATCTCTACCTCTGGGCTCTTTTGAGGACGGGGGGGCCGTAGGTC
CCCGCGTCCGGGGTTCTAGTATATTCTATCTATTTGAATACGTATAGACT
ACCAAGACTACGTACTATTTTGAACTCGTTTGCACCGTTGATGCACAAGC
GAACTGGTTGTGTCAAACGATCTCCAAGTAATCTCCCCGCAACTACCCCC
CCCGCCAAACATTGTTTTCAAGGTAACCCAATTTTTGCGCCTAGCCAGGG
ACTGCCAGATTGTAGATGGTGGTCGAGCCAATATCCACGAAGACCTCCAG
GGCCGGTCTCTGGCGACAGCGGCCATTCGATCCAACCCGCAGCTGCATGG
CCGACGCAGATTAGGACAGGCGGCGGTAAACCTGGCATTTGCCTCCATTA
TCCAGGGACGGGCGAAGGTACTGGATATCACTATAGGTTGTGTCGGTGCC
GATACCGTTCTACTGGGCGTGCTGACACGTTACAGCGCACTCAGATTCAA
GGATGTTGTGCAGGAGGGCTGTAGCATCAAAGTACTCTTGAACCGCTGCA
GTCGGGCATGGAACATCCTCCATTCTCAGCTTCTCCCTGGCGCAACTAGT
GCGCCGCGCCGGGGCGGGGTTTCTTGGCAAACGGCGCGAAGTATCACAAG
TCTGAGACAGTTTCGTCATTTCCCTCAACACGGCAACTAGAGAGGGACTC
GCAAAAAACACGGGCGGAGTGGCGAGAAGCAAGAACGCCGCGGTTTGCTT
GCTTCCATTCTGAGCACGATGTGCCCCATTCTTCCCCCACCAACAATATC
TCCAGGTGGCATCAGAAGGCTTTCGCGGTAGAAAGCATCGAAACACGACC
CGCTCATCCCCAGCGGGCGCCGAGCATACCGCGGTGAAGAGCAAACTCAC
TTACCCCGAGTTTCTCGACGCCCTTGTAGTCTTAGGGGAACGCATGTACA
GAGTATCAAGATCGCAACCCGCCGAAGGTGGAAACTCGGCGATGAGAGAC
GGAAACTGTGATCGGAGTGTGGAGTCCACTTTTCAACAGGTGATCGAGGG
TTAGAGCTTGGTGGTAGGGCCTCCCTTCTCTCCTAGAAGACTTAATGGAC
TCTAAGAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTTTTGTTGTTGTTTCTTCACATTAAAACCCGTTTCGATAT
CTTCACCCAGTACCTCCCTATGCTCGTACAACCAACACTTGATGCGGTCA
ATTCCCATGGTCACAGGATAACTTATACCTAAAAAAGGGTATACGAAAAT
AAAAATGGACCCGAAGGGTCAGCACGCGATACAAATCAAAGACGAATAGT
GTGGAGCCCCTCGCTCCCCTCTACACGCTATGCGAGGTGAAAAAAAAAAC
TGAACAAGCCAACATCACCAACCGCCCCTGGTTCTGTCTTGGTACCCTAA
CAATGCCAGCGTGTTCCGTGCCGGGTTCTCGCCGGTCAGGCCCAAAAATC
TATAGTCCTCCCCACCGAATGTACCGTCCACACGACATGAAACAAGTGGT
GGTGCTTTCCCCGGTAGCAGCAGGCAACATGGAAAATAAGCAGAATTTCG
ATACTCCCAGCAAAATACGCTCGGATCCTGCCTTGTGTATTTACATGATA
CGACGGTTCGGTAGAACATAACACGTATATTCATCATCCCACGCACCAAT
TCGATCGCCATTTGCTTCGATGTCCCTCGAAGCTGCTGATGGAACACATA
CTTCCACTAGCATCACGTCGACGGCCAACTTCAATTTCCGATGCGATACG
AGATCCTCTTGTGCGAGACCTGCTGCAGCACTACAAACCCGCGCTGCGAG
AAATCTTCAGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5781:3397..7007+ >mRNA_L-elsbetiae_contig5781.14199.1 ID=mRNA_L-elsbetiae_contig5781.14199.1|Name=mRNA_L-elsbetiae_contig5781.14199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig5781:3397..7007+ (Laminarionema elsbetiae ELsaHSoW15) ATGGCCGACGTAGAGGAGGAGTTATGGAACATATTCACGTTCTACACACT TCGAGGGAATCCTCTGGATCTCACACGGCTGTCGATGGCCGACGTAGAGG AGGAGTTATGGAACATATTCACGTTCTACACACTTCGAGGGAATCCTCTG GATCTCACACGGCTGTCGGTAACCCAATTTTTGCGCCTAGCCAGGGACTG CCAGATTGTAGATGGTGGTCGAGCCAATATCCACGAAGACCTCCAGGGCC GGTAACCCAATTTTTGCGCCTAGCCAGGGACTGCCAGATTGTAGATGGTG GTCGAGCCAATATCCACGAAGACCTCCAGGGCCGATTAGGACAGGCGGCG GTAAACCTGGCATTTGCCTCCATTATCCAGGGACGGGCGAAGATTAGGAC AGGCGGCGGTAAACCTGGCATTTGCCTCCATTATCCAGGGACGGGCGAAG GTGGCATCAGAAGGCTTTCGCGGTAGAAAGCATCGAAACACGACCCGCTC ATCCCCAGCGGGCGCCGAGCATACCGCGGTGAAGAGCAAACTCACTTACC CCGAGTTTCTCGACGCCCTTGTAGTCTTAGGGGAACGCATGTACAGAGTA TCAAGATCGCAACCCGCCGAAGGTGGAAACTCGGCGATGAGAGACGGAAA CTGTGATCGGAGTGTGGAGTCCACTTTTCAACAGGTGGCATCAGAAGGCT TTCGCGGTAGAAAGCATCGAAACACGACCCGCTCATCCCCAGCGGGCGCC GAGCATACCGCGGTGAAGAGCAAACTCACTTACCCCGAGTTTCTCGACGC CCTTGTAGTCTTAGGGGAACGCATGTACAGAGTATCAAGATCGCAACCCG CCGAAGGTGGAAACTCGGCGATGAGAGACGGAAACTGTGATCGGAGTGTG GAGTCCACTTTTCAACAGCTGCTGATGGAACACATACTTCCACTAGCATC ACGTCGACGGCCAACTTCAATTTCCGATGCGATACGAGATCCTCTTGTGC GAGACCTGCTGCAGCACTACAAACCCGCGCTGCGAGAAATCTTCAGGCTG CTGATGGAACACATACTTCCACTAGCATCACGTCGACGGCCAACTTCAAT TTCCGATGCGATACGAGATCCTCTTGTGCGAGACCTGCTGCAGCACTACA AACCCGCGCTGCGAGAAATCTTCAGG back to top
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