mRNA_L-elsbetiae_contig5780.14198.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5780.14198.1
Unique NamemRNA_L-elsbetiae_contig5780.14198.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A6H5JD01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD01_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 3.800e-121
Identity = 181/237 (76.37%), Postives = 205/237 (86.50%), Query Frame = 1 
Query:  199 QVACTQVHALFLRMQGSENWNSPNMIEIHYHPDMEKYMVRR--NMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSVSVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYFGLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGWGPGGDAAFFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDYRMLAGLGWWNET 903
            +VACTQVHALFLR+QGSENW++  M EIHYH DM+KY +    NM P R S+IL+DPTWTK VFLRDPAERLLSCFLDK+VHR+SYSV+VF+A + LSFE+FV LTSK A+AR Q+ YPGGNLGL+RRSNPHW+PQL+FGLDKFLPYFDF+GDFKHV  HSE  L+RAGLW EFGASGWG  G AAFFQRSTV+GHATGSHDS  QYYTP LLASVREAYA TDY++LA LGWWNET
Sbjct:  809 KVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPAERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQQDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWKEFGASGWGRWGQAAFFQRSTVRGHATGSHDSFGQYYTPELLASVREAYADTDYKLLASLGWWNET 1045
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 6.570e-91
Identity = 141/189 (74.60%), Postives = 163/189 (86.24%), Query Frame = 1 
Query:  199 QVACTQVHALFLRMQGSENWNSPNMIEIHYHPDMEKYMVRR--NMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSVSVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYFGLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGWGPGGDAAFFQ 759
            +VACTQVHALFLR+QGSENWN+  M EIHYH DM+KY +    NM PER S+IL+DPTWTK VFLRDP ERLLSCFLDK+VHR+SYSV+VF+A + LSFE+FV LTSK A+AR Q+ YPGGNLGL+RRSNPHW+PQL+FGLDKFLPYFDF+GDFKHV  HSE  L+RAGLW++FGASGWG  G AAFFQ
Sbjct:  732 KVACTQVHALFLRLQGSENWNTQRMEEIHYHKDMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFFQ 920
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN)

HSP 1 Score: 152 bits (384), Expect = 3.000e-38
Identity = 93/253 (36.76%), Postives = 130/253 (51.38%), Query Frame = 1 
Query:  199 QVACTQVHALFLRMQGSENWNSPNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSVSVFRANDF----LSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYF-GLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGW----------------GPGGDAA-FFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDYRMLAGLGW 891
            +VACT+   LF R++G EN N     + H+  D  K +  + M     +++++DPTWTK  F RDPAERLLS +LDK  + K YS   +    F    ++F  FV   +   + R      G   GL   +NPHW+PQ +   ++KFLP ++F+G F H+G H+E LLR  GLW+ +GA+GW                G G D    FQ++      T         YTP LLA VR AYA  DY M   +G+
Sbjct:   58 KVACTEFMRLFFRLKG-ENQNQRWKGDPHFRQD--KPLFNKIMNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFKDKHMNFSGFVDRIASKNRVR------GKPDGLHPNTNPHWRPQRFMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGWTKALKRTVVDKIKGAVGGGDDGGRMFQKNAAWHQTTKMKPENHDLYTPELLAKVRRAYA-MDYEMFDAVGF 300
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A7S4E7B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7B5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.830e-38
Identity = 98/261 (37.55%), Postives = 137/261 (52.49%), Query Frame = 1 
Query:  199 QVACTQVHALFLRM---------------QGSENWNSPNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVH----RKSYSVSVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYF-GLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGW---GPGGDA---------AFFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDYRMLAGL 885
            +VACT+   LF RM               Q +E   +    + H+ PD  K ++ +  TPE  +  ++D  +TK VF RDPAERLLS +LDK  H    R  Y + +F+ +  ++F  FV    +  + R          GL   +NPHW+PQ +   L+KFLP + F+G F H+  H+E +LR+A LW+EFGA GW    PGG           + FQ++T   HA G+     QYYTP LLA VR+AYA  DY ML  +
Sbjct:   86 KVACTEFFRLFHRMADSKKKCATVGQCATQMTERQRNRWKGDPHFRPD--KPILNKVATPEEATHAMNDKNFTKFVFFRDPAERLLSAYLDKFEHGSRYRVGYGLRIFK-DPKMNFSGFVERIERVNKRRSNPD------GLHPHTNPHWRPQRFMCNLEKFLPLYTFVGSFTHLREHTELMLRQANLWEEFGARGWPLKAPGGSGKVPARGPTGSMFQKNTAW-HADGTSSKTEQYYTPELLARVRKAYA-MDYEMLESI 335
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A7S3LEC1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.910e-29
Identity = 78/234 (33.33%), Postives = 111/234 (47.44%), Query Frame = 1 
Query:  190 TDAQVACTQVHALFLRMQGSENWNSPNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSVSVFRANDFLSFERFV---ALTSKDAQ-----ARFQEQYPGGNLGLSRRSNPHWKPQLYFGLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGWGPGGDAAFFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDY 867
            T  +V CT    LF RM G ++W   N   I +HP         +  P     +L+DP+WT+A+F RDP ERLLS +LDK++H     V V    +  S +  +    L  K        A F E+       + +  +PHW+PQ +   D + PY +F+G   H+   ++ LL++ G WDEFGA GW  G   A F  +    HAT +    S YY  P L  + E     DY
Sbjct:  151 TIPKVGCTVFKQLFRRMYGYQSWKEHNDF-IPHHPMSNGLNYLYHYKPREAERMLTDPSWTRAIFFRDPKERLLSAYLDKVLHENGKYVRVHCCGNNPSLKMLLHCQVLLDKLPNPLLTFADFLEKI------VLQCKDPHWRPQAHRLPDLYWPYINFVGHMDHIEQDTKRLLQKIGAWDEFGAHGWESG---AIFSGAASVAHATDARQKVSSYYMSPQLIQLAEHLHKVDY 374
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A7S0CHZ7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHZ7_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.510e-27
Identity = 86/256 (33.59%), Postives = 121/256 (47.27%), Query Frame = 1 
Query:  319 RNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHR------KSYSV-------SVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYF-GLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGAS---------------------------GWGPGGDAAFFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDYRMLAGLGWWNETTRYEHSSDD--IPT*YGLQS 957
            +N+  E+   IL+DPT+T+AVFLRDPAERLLS +LDK  H       K Y         S F   + +SF+ FV   S       +     G +GL + ++ HW+ Q    GLD  LP +DF+GDF  +G HS+ LL++ G WD +G +                             GPG     F +     H + S +   +YYTP LL+ VR+ YA  DY +   +  W      + SSDD  +P  Y L+S
Sbjct:    2 KNLPIEKAQEILNDPTYTRAVFLRDPAERLLSAYLDKFKHGAYSKKIKEYDKVHAKDGQSPFMKGNKISFQEFVNTLSHPVVLNSKSCMGKGVIGLHKCTDVHWRSQKKICGLDGMLPLYDFVGDFAKIGNHSKLLLQQLGAWDTWGRNYDRGPPEQGKEKMQCNVPAQKRNESSVDPGPG-----FNQIPPAVHISKSKEKFEKYYTPELLSKVRKLYA-MDYAIYDEIQKWKR----DSSSDDHVVPAAYRLES 247
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BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A1Z5KGR8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGR8_FISSO)

HSP 1 Score: 122 bits (305), Expect = 2.540e-27
Identity = 73/227 (32.16%), Postives = 113/227 (49.78%), Query Frame = 1 
Query:  190 TDAQVACTQVHALFLRMQGSENWNS---PNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSVSVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYFGLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGWGPGGDAAFFQRSTVQG---HATGSHDSKSQYYTPPLLASVREAY 852
            T A+V CT    LF RM G  +W +   P+++  +   +  KY+   +   E  S ++++P WT+A+F+RDP ER LS +LDK  H+       F   +   F+   A  ++ +   F E        +    NPHW PQ     +K+ P+ +F+G  +H+    E LLR+ G W+ +GA GWGP G  + FQ     G   HATG+ +   QY +  L A +   Y
Sbjct:   94 TSAKVGCTVWKQLFRRMMGIPDWKAEQTPDLLPWNSELNGLKYLY--DYDRETASMMMTNPEWTRAIFVRDPKERFLSAYLDKAFHKS------FVDRNCCPFKMTCAAEARKSAKHFLEL-------IKTCENPHWMPQSSRMEEKYWPFINFVGYMEHLSEDGERLLRQIGAWETYGAWGWGPTGKDSVFQSQEGGGGRAHATGARNKLKQYISQELEAELDSFY 305
[Close]
BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A8J2SW07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW07_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.000e-27
Identity = 84/252 (33.33%), Postives = 121/252 (48.02%), Query Frame = 1 
Query:  199 QVACTQVHALFLRMQGSENWNSPNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKS------YSVSVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYF-GLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGWG----------------PGGDAAFFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDYRMLAGL 885
            +VACT+   L  R++G  +W      + H+  D    + R +        IL+D  WTK  FLRDPA R LS +LDK V   S      Y +  F     L++  FV     +   R++ +      GL   SN HWKPQ +   L+KFL  + FIG ++ +  H+E LLR   LWD +G+ GWG                P  D+ F Q++    H+T +   K+ Y TP +L+ +RE YA  DY ML  +
Sbjct:  158 KVACTEFIRLMYRLEGDVHWWK----DPHFRTDASTLLKRGD--EREAEHILNDANWTKVAFLRDPATRALSAYLDKFVDSPSRGIHGNYGLRHFGRE--LNWTEFVDTLGSENTDRYKPE------GLHVGSNAHWKPQRFHCSLEKFLTKYQFIGRYESLRDHAEMLLRSLNLWDAYGSKGWGHRDKRQRLMPKPSDSIPVRDSLFAQKAK---HSTNADARKASYLTPSILSKLREIYA-MDYEMLDAI 391
[Close]
BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A7S2VCG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCG1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.010e-24
Identity = 81/245 (33.06%), Postives = 118/245 (48.16%), Query Frame = 1 
Query:  190 TDAQVACTQVHALFLRMQGSENWNSPNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSV-----SVFRANDFLSFERFVALTSKDAQARFQEQYPGGNLGLSRRS--NPHWKPQLYFGLDKFLPYFDFIGDFKH-VGAHSEALLRRAGLWDEFGASGWGPGGDAAFFQRSTVQGHATGSHDSKSQYYTPPLLASVREAYAPTDYRMLAGLGWWNE 900
            T  +VACT    LF RM+G  +W   N   + + P         +  P +   +L+DP+WT+A+F+R+P ERLLS +LDK+V   SY +      V    + L  + F  + S     R         LG   +   +PHW+PQ      K+  Y +F+G   H V   ++ LL + G WD++GA+GW  G   + F  +    HAT + D+   YYTP L   V E     DY M   LG+ NE
Sbjct:   69 TTPKVACTVWKKLFRRMEGYSDWQVEND-NLPHSPYTNGLNYLYHYKPAQADLMLTDPSWTRAIFVREPKERLLSAYLDKVVGNHSYYLRKHCCKVTTIEEILQCDVFHRIPSPSPSLRDPAVSFTEFLGPVYKECVDPHWRPQAKRMPAKYWSYINFVGHLDHGVEKDAQRLLTQIGAWDDYGANGWPSG---SIFANNHAH-HATAAKDNVVHYYTPEL-ERVAETLHKIDY-MHPKLGFRNE 306
[Close]
BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Match: A0A7S3P9E1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9E1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.470e-24
Identity = 78/231 (33.77%), Postives = 104/231 (45.02%), Query Frame = 1 
Query:  190 TDAQVACTQVHALFLRMQGSENWNSPNMIE-IHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFLRDPAERLLSCFLDKIVHRKSYSVSV--FRANDFLS----FERFVALTSKDAQARFQEQYPGGNLGLSRRSNPHWKPQLYFGLDKFLPYFDFIGDFKHVGAHSEALLRRAGLWDEFGASGWGPGGDAAFFQR---STVQGHATGSHDSKSQYYTPPLLASVREAY 852
            T A+VACT    LF RM G ENW      + + ++P         N      + +++ P WT+A+FLRDP ERLLS FLDK+       ++   +   D +S    F  F  L        FQ Q            N HW PQ     +K+ PY +F+G    +   S  LL + G W E+GA+GWG     A F     S  + HAT + D   QYYTP     V E Y
Sbjct:  541 TTAKVACTTWKQLFRRMMGYENWFVEGTEDYLPWNPQTNGLKYLNNYDRAAATEMMTSPEWTRAIFLRDPKERLLSAFLDKVKKEPEVVLNTCCYWERDCISSGTTFHEFTRLA-------FQCQ------------NEHWTPQRKRMEEKYWPYINFVGYMDSIAKDSRELLEKIGAWKEYGATGWGEDRTKAIFHSQAGSAGRMHATSARDRLKQYYTPDTELEVEEFY 752
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5780.14198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD01_9PHAE3.800e-12176.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIV5_ECTSI6.570e-9174.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0Y5E9_AURAN3.000e-3836.76Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4E7B5_9STRA5.830e-3837.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3LEC1_9STRA4.910e-2933.33Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S0CHZ7_9STRA1.510e-2733.59Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5KGR8_FISSO2.540e-2732.16Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A8J2SW07_9STRA7.000e-2733.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2VCG1_9STRA1.010e-2433.06Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S3P9E1_9STRA1.470e-2433.77Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5780contigL-elsbetiae_contig5780:4280..10609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue1.3e-79
Seed eggNOG ortholog2880.D8LIV5
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2E1X5@1,2S96K@2759
Ec32 ortholog descriptionSulfotransferase
Ec32 orthologEc-20_001700.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1510
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5780.14198.1prot_L-elsbetiae_contig5780.14198.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5780 4367..10041 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816620.115268-UTR-L-elsbetiae_contig5780:4279..43661622816620.115268-UTR-L-elsbetiae_contig5780:4279..4366Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5780 4280..4366 +
1691683690.072486-UTR-L-elsbetiae_contig5780:4279..43661691683690.072486-UTR-L-elsbetiae_contig5780:4279..4366Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5780 4280..4366 +
1622816620.2062836-UTR-L-elsbetiae_contig5780:10041..106091622816620.2062836-UTR-L-elsbetiae_contig5780:10041..10609Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5780 10042..10609 +
1691683690.145315-UTR-L-elsbetiae_contig5780:10041..106091691683690.145315-UTR-L-elsbetiae_contig5780:10041..10609Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5780 10042..10609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816620.12643-CDS-L-elsbetiae_contig5780:4366..45581622816620.12643-CDS-L-elsbetiae_contig5780:4366..4558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 4367..4558 +
1691683690.085493-CDS-L-elsbetiae_contig5780:4366..45581691683690.085493-CDS-L-elsbetiae_contig5780:4366..4558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 4367..4558 +
1622816620.1401064-CDS-L-elsbetiae_contig5780:5747..59111622816620.1401064-CDS-L-elsbetiae_contig5780:5747..5911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 5748..5911 +
1691683690.0938246-CDS-L-elsbetiae_contig5780:5747..59111691683690.0938246-CDS-L-elsbetiae_contig5780:5747..5911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 5748..5911 +
1622816620.1502771-CDS-L-elsbetiae_contig5780:6621..67081622816620.1502771-CDS-L-elsbetiae_contig5780:6621..6708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 6622..6708 +
1691683690.1033945-CDS-L-elsbetiae_contig5780:6621..67081691683690.1033945-CDS-L-elsbetiae_contig5780:6621..6708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 6622..6708 +
1622816620.1631787-CDS-L-elsbetiae_contig5780:7533..76031622816620.1631787-CDS-L-elsbetiae_contig5780:7533..7603Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 7534..7603 +
1691683690.1136816-CDS-L-elsbetiae_contig5780:7533..76031691683690.1136816-CDS-L-elsbetiae_contig5780:7533..7603Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 7534..7603 +
1622816620.1818004-CDS-L-elsbetiae_contig5780:9386..95471622816620.1818004-CDS-L-elsbetiae_contig5780:9386..9547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 9387..9547 +
1691683690.126935-CDS-L-elsbetiae_contig5780:9386..95471691683690.126935-CDS-L-elsbetiae_contig5780:9386..9547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 9387..9547 +
1622816620.1939-CDS-L-elsbetiae_contig5780:9860..100411622816620.1939-CDS-L-elsbetiae_contig5780:9860..10041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 9861..10041 +
1691683690.1363108-CDS-L-elsbetiae_contig5780:9860..100411691683690.1363108-CDS-L-elsbetiae_contig5780:9860..10041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5780 9861..10041 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5780.14198.1

>prot_L-elsbetiae_contig5780.14198.1 ID=prot_L-elsbetiae_contig5780.14198.1|Name=mRNA_L-elsbetiae_contig5780.14198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
MWKVHSCSPFLRSLLPRPALRPYRLPPTAPTTPATDAQVACTQVHALFLR
MQGSENWNSPNMIEIHYHPDMEKYMVRRNMTPERVSSILSDPTWTKAVFL
RDPAERLLSCFLDKIVHRKSYSVSVFRANDFLSFERFVALTSKDAQARFQ
EQYPGGNLGLSRRSNPHWKPQLYFGLDKFLPYFDFIGDFKHVGAHSEALL
RRAGLWDEFGASGWGPGGDAAFFQRSTVQGHATGSHDSKSQYYTPPLLAS
VREAYAPTDYRMLAGLGWWNETTRYEHSSDDIPT*
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mRNA from alignment at L-elsbetiae_contig5780:4280..10609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5780.14198.1 ID=mRNA_L-elsbetiae_contig5780.14198.1|Name=mRNA_L-elsbetiae_contig5780.14198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6330bp|location=Sequence derived from alignment at L-elsbetiae_contig5780:4280..10609+ (Laminarionema elsbetiae ELsaHSoW15)
AATCGGGTCTACTATCTGTGGCTGTGTCTACTATCTGTTGCTGTGCTATT
CGCAAGTCTTTTTTTATTGCCATCCGTGGGGAACCGAATGTGGAAGGTAC
ATAGCTGCTCTCCCTTCTTGCGCTCATTGCTGCCGCGCCCAGCCCTACGT
CCTTACCGCCTGCCCCCCACCGCCCCTACCACTCCTGCCACCGATGCTCA
GGTGGCCTGCACCCAGGTTCACGCTTTGTTCCTCCGGATGCAGGGGTCTG
AAAATTGGAACAGTCCGAACATGATCGAGGTACGACTTTAGTGTAACTAG
TGCCTGCGTTTGGTGGGCAGTTACCGTAGGTGACCCAAGATGCCACACCC
CCTGAGCCGAATCTCAGAGCTCCATTCCTCCGTAACGAAGAAGGTGCCAG
CACCGAACGACACATTTTCGGACAGTCCTCGACTAGATCTTTCCAACGCC
ACCCCTTTCGGCACTGGCACTCTTCTTGCTGGGGAGGAATCGAGCTTTGG
AAACGTGTCCAACGGGTGTGGTATCTTGTGTCACCTACGATAGTTTGTCG
CGTTGCAGTATTTAGTGTGTTTGCTCGTTTTTAAATTATCGTTTTGCGTC
AGGGGGTACCCGCGTGCATTCGCCAAGCACACACGCACACACAAACGCAT
CGTTTTCCTCCCTTTTTTTTGTTTGCCTGTTTCGTGTGTGGCGTTCAAAT
TCGTGCGCAGGGGCTAGTTTTGTGAGAGAGGATAGGATCGCTGGTGTTGC
GTGCCCTCGTTGCGTGCCCTCTTTGCTCTTTGCTGCTCGTGATGGTGCGC
CCTCCCCTCATTCCCGCCGAACAAACGCCTCCGCAAAAGGGCTTGATGCC
TGTAGTTGATCGGCGGAGAAGGGGCGATCTAGCCCACAGACACACCCTCC
TTGCGCGTATGGGGGGGGGGGGGTCACACCATCTACAAGTAGCAATGCGT
TTGCGTTGGGGGTAACCACACAATTTGTTTTGTTCGACAATCCACCCGTG
CCATTTTATTCTCCCGCCCCTTCCTCCTGCCAAAAGAGCGGTGAACTATT
AAGTCAAGCTCAACCGAAGCGCCTATCGGGAGCGGGTCGTTGGTTTGTTC
TTTCAACTCAACAAGTAGAAGCGTATGTGTATGTATAATACATTTTCGCT
CCAACCCGCCGTCACTCTCCCCCCTTTCGGCGCGTTTTTGAGGATTTTTT
ACCGCACCTTTGGCCCTGTCGAAGAACCGCGACTACAACTCGGGAGGAAT
ACCGCCCATGTATACACCAAACCTTCAAGTCAGCCCCGCCCGCTCTCAAA
ATTTCCGCCTTCGTTGTGGGGGGAGATCCTTCGGGGATTGGGCGAGAACC
CGAGCGTGCCAGAGGGACCGTGTGGTCTCATGACTCCGCGTCCGTGCGTG
CGTGCGTGCGTATGAGTACCCCCCGGCCCTGGCCCTTTTCTTCTGTTTGG
CTGTTGTCGTCGCGGTAGATCCACTATCACCCTGACATGGAGAAGTACAT
GGTGAGGCGGAACATGACCCCCGAGAGGGTGTCGTCCATCCTCAGCGACC
CCACCTGGACTAAGGCGGTGTTCTTGAGGGACCCCGCAGAGCGCCTGCTG
TCCTGCTTCCTTGACAAGATTGTGCACAGGAAGTGAGTGAGAAAAAATAA
AATGTTTCCTATGATTTGTCTTTTTATTATGTTGTTTTTTGTTGGTTCTC
TCTTTTTAATTAAATGTATATTGTACAAATGTCAGCAGTCTACGTCCAGT
CTGCGAAGAAGTCGTTCCAGAGGGACTATTTTTGTGCGGTTTTGCGTCCT
CTCTTGTCCTGCTTCCTTGACCAAGATCTGTGTGCACAGCAAGTGGGTGA
GAAAACTCTGTTTTCTGTGTTCGTTTTTATTGTGTGTGTGCGTGCCATTT
TCCCTCTCCGTTGTGTGGTTTTGTCCGCCTTTTTTCTCTTTGTTCCGCCT
GGGCTAGTTTTCGGGTTTCGTTGCAGCCCCTCCGCGGGTGGCCTCTTGTC
CCGCTCTCTGGGCCCGGCAAAATTAGTTCCCGTCAGTAGTAAATGCCTGG
ATTGCTGCGCTTGCTGAGTCTTCTTCATGCATTTTCGTGTGTCGTTCTGC
CGGGTGGGCTTGGCCTCTGCCCGCGGCACCACACGCACTAGACCACCCAC
CTTATGCTGCATGCGCTCGGGTTCGACTCCCTTTCATCGCACCAAAATCG
CCTCCCGCAAAACCCGCCCCAGCAAGCACAACCGCATGGCCCCAAACATG
AGGTGTTTTAGCGGCAGAGAAAAGAGCAGCAAACGACAGGCAGCAACAGC
AACAACATATGCGTCCGCCGCGTTCACAACATTCTCGCGCAGGTCGTACA
GCGTGTCGGTGTTTCGAGCCAACGACTTCCTTTCGTTCGAGCGTTTCGTC
GCCCTGACCTCCAAGGACGCCCAAGCAAGGTACGGTTCGACCCGACCCGC
GCGGTTTGTTTTCCGGGCTGCGTGTAATCAGTTGTGTGGGGCGGGGGGGC
GGGCAGGCAGGCAGGCAGGCAGTCACAGCAGACGGGCAGGCAGTTTTTTT
GCCAGTTTCCGCGGTCTTACGTTTCTCATGGCGTGCGTTGTGCGAGCCGG
CCGGTCAATCGTTGTAGTGCTTTCTGTTGAAAAGTGCGGAGTACATGCTC
ACCAAACTCTTGCTTTCCCTCTGCGGGCTCGACTAAAAACTCTGAACCTG
GTTAGGGGGATAAGGGGGATTTACGGGGCCCTCTGTAGAGACTGGAACAC
CCCGCGTGATCGGCTCTGCTGTCGCGCGGCGATGTTCGTGCCAGCGTGGT
CCCCGGTTTTGAGTGTTTTATTTCCGGACTTGGTCATTGATGAGCGCGGC
CAGCTGTGGTTGGAATCATCTCTCTCGACCAAAGGAACACGCCGAACGAA
CGTTTGTTTCCCTTTTTCGCACAGAATACGGCGGGCATCCTCGTGACCGG
TTCGTTTTTTTTCCTTTACGCTGGGCCGTCGCTTTTTTTTCTCTCTCGGA
ACTTCCGGTTCGCTGACGCGCGTGGTTAGCCGTGGGTTCCCAAAGCATTG
CCTTGACCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTT
TGGGGACGCTTGGTCGCGCCAACTCGCAAGAGGGATGCGCAAATGCATCT
CAGCCGCTGCGGCCAAACGGACTGACCTGCTCTTGCGGCACCATGTCGCT
GTCCACGCCGGACGCGGTCCGGTTTTTGTTCGTATTTACTCTTGTTTAAT
TAAGATTTCAGGAGCAGTACCCCGGAGGCAACCTTGGGCTCTCTCGGAGG
AGCAACCCTCACTGGAAACCGCAGGTGCGTCTCGGGGTCAGTGGACGAGT
AGTGCAGTGGGCGAGAGTGCCTTTTTGTATCCTATATAGCCTGTGCCTAG
TTCGAGCGTAAGCTTCACCTTGAGTCGTCCAAGCCACATGGGCACATGTC
CCGTCACCGCCTTTCCATTGGGCAATCAGAGAGGCTTGGTTACATGCCCC
CCTGGCGTGGTCGCGACGAAGTAGATCTATTTTGATTTATAATTGCTCTG
AGCGTCGCTCCCTGGCATCGCTGTGGTGGCTTCGTTTTGGTTCTCTGTCC
GGAATTCTGAAATTTGCGGTCTGCATCCTTCATCCGCTTTCTCTACTCTC
TTTCTCTCCCGAGGTGCCCTTCGCGTGTGGCTGCCTGCAGTGCACTTCAC
AGTGCATTCGAGCATTCGCTTCTCTCTCTTATCTCTCTCCCTCTCCCTTA
TCTCGCAGTGTCTTTCTCTCTCTCTGTTGTCTCTTTTTCTCGGCGCATTT
TGTCTGAGAGGGCTCTTATTTCTTATTTCCACCCGGAAACTCTCGGCGTT
GCTACCCCGAGGTGTCCCTCGCGTGCGTCTGTGCATTGCTACTCGTGCTT
CCCCCTATGCTACTCGCGGTTCCCCTACAAGTACTGTGGTTTAAACCTTT
CTCTCTCATGAGAGCGATGGGCTCTCTATCAAGCTATGTATCTAACTATT
TACGTACTTTTTTTCTACATCTACCGAACAGTTTTTGTTTGGAAATTTGG
CTCTCGCTTGAAACACCGCTTTTATTCGCCGAGATGGTGAACGCGCCGAA
GGGGTCAATTGCGAACCGACTGCTAGCAGCTGTGTAGATGTGTATGCAGC
ATGTGTAGATGTGCAGCTATGGGTACCCTGCGCGGCACTCTATGTAGTAT
GCGTATTGTTGAGCCCGCGGGTACACTCGCAGCAGCGCCGTCAATACAAG
GAGGAGGGCAGTTATCTTGCACATACATCCTTCATGTCACTCCATGTTAT
CCTCCTGCTGACGTGCTTTGCGTGCTTTTCGGAAGTGTAGTCTATGTAAG
TAGATTACCTAGAAGATCTCTACAAATATCTTTAGATGTTCAAAAAACAA
CTGCTGTTTGTGTTTTCCAAGTACACTCTACAATACCTTGGATGCGCTTA
CAATACAAGCGGGGACGCGTGCTAGCGCCCCAAACCTTGTATGTATGTAG
GTTGTGTTTTTACTCACAGTATGTTTTCTTCGCGGCGCCTGCTTTCTGTA
CAAATTTCGGACGCGGAAGGAGAGGCATGTATGTATTGCGGTCTTGTGTT
GGAACCGAAAAACGTAACTTTACGCTGCCAACCTTGAATGTGTTGGCTCA
CCAAGAAGAGTGCCAAACCGAAAACGCCTCTTTGGAGAGTCAGGTGGCAA
GGGACCCCTGTTCCCCTTTTACCCTCGGGCGCACGTATGGCCACAGAATC
AGGAAAGGAGGTCGCCACCGGGGAAAATAGAGAATAGTTGTTTGCCATGC
GTGTTGGCAGAGGGATTCCAAAACGAGCGTATTTGCCTATCCCTGGAAAC
CTGTGAATGTCAAGTAAGTAGACTTCACATGCATGATATGTTTTTTAATA
CTTATTGTCACATGCATGATATGGTACTGAGTATCCCCCCCCCCCCCCCC
CCCCCCCCTCTTGCCCTTCATTCCCCGCGTGTAAATTCCCCCCCACCTAC
ACCTACCTTACCCGCCCTCCTCCGGGGAAGGGANNNNNNNNNNACTTATT
GTCACATGCATGATATGGTACTGAGTATCCCCCCCCCCCCGCCCGATACT
TGTTCAGCTGTACTTCGGGCTGGATAAGTTCCTCCCGTACTTCGACTTCA
TAGGCGACTTCAAGCACGTGGGGGCGCATTCCGAGGCCCTCCTGAGGCGG
GCAGGCCTGTGGGATGAATTCGGCGCCTCTGGCTGGGGTCCCGGGGGGGA
CGCGGCATTTTTCCAGCGGTAGGTTGGTTGGGTTTGGAGCGCTGTCCCCC
TCCGTTCGAGCTGCCGAGGGCGACACTTTATCAACGCCCCCCCTCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCGTTTGGGGCGAGACCAATGTCA
AGTGTTCCTCCCGGCATCCGATTCGCTTCAGCTCTCCATCTCGGATGTAC
AAAACGACGACGCTCGATGAGAAGATTGAACAACGCTCCCTCCCCCCTTC
CCCCGTACCCCCCCCCCCCCCTCCGACGTACCCCTATCTATTGTCCCCCG
CCTATTCGTGATTATTTTGATGATTAATCAGGAGCACCGTGCAGGGCCAC
GCCACAGGAAGCCACGATTCCAAGAGCCAGTACTATACACCTCCTCTGTT
GGCCTCCGTCCGAGAGGCATACGCCCCGACTGATTACAGAATGCTGGCCG
GTCTCGGCTGGTGGAACGAGACCACGCGATATGAACACAGTAGTGATGAT
ATACCTACATGATATGGTCTCCAAAGCCGATTTATCACCACCTCGATGCA
GTTTGTGTGTGGAGGTAAGGTAAACTGTTGGCCAGTTCAACCGAGAAGGT
AGATATGGCTGCCGAGTGGTCCGGGTGTTGTAGTTGTCGCGTGTGAAAAA
AGAAATTGCAGCAGATGCGCTCTCGTTTGTGGTGCTGCTGTCAGAGTGAT
TGTCCGCGTAGTTGGTTTGATGTTGAATGTATGTGCCCCTGTGTAGGCTG
AACAAGCTCTCTCTGAGGGCGCGGGTGATGTCTCTTTTGTGTTTCTGTTG
TAGCTGTTCGGTGTGTATTTTATTGTCTTTGGTTTTGAATGCTTCGAGAT
GTGCGGCCGAGTCGGGCGTTCTTTTGCGGGGGGATATAGCTCTAGTGCGT
GTGGTATCAGAAGCTGGTGGTTGCCATAATTTGTGGCCCTCCTGAAGTTT
TTTGTACGGGTGAGAGGCGAGGCCTGGTTGCAGAACGTCTTTCTCTACAG
AAGTGTATATGTTGTAGTCCATGTCGTTTCTATTAGGTTGACTTATATTG
GAGTTTTCAGTGTTTTATTTTTGCGGGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5780:4280..10609+

>mRNA_L-elsbetiae_contig5780.14198.1 ID=mRNA_L-elsbetiae_contig5780.14198.1|Name=mRNA_L-elsbetiae_contig5780.14198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1710bp|location=Sequence derived from alignment at L-elsbetiae_contig5780:4280..10609+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGAAGGTACATAGCTGCTCTCCCTTCTTGCGCTCATTGCTGCCGCG
CCCAGCCCTACGTCCTTACCGCCTGCCCCCCACCGCCCCTACCACTCCTG
CCACCGATGCTCAGGTGGCCTGCACCCAGGTTCACGCTTTGTTCCTCCGG
ATGCAGGGGTCTGAAAATTGGAACAGTCCGAACATGATCGAGATGTGGAA
GGTACATAGCTGCTCTCCCTTCTTGCGCTCATTGCTGCCGCGCCCAGCCC
TACGTCCTTACCGCCTGCCCCCCACCGCCCCTACCACTCCTGCCACCGAT
GCTCAGGTGGCCTGCACCCAGGTTCACGCTTTGTTCCTCCGGATGCAGGG
GTCTGAAAATTGGAACAGTCCGAACATGATCGAGATCCACTATCACCCTG
ACATGGAGAAGTACATGGTGAGGCGGAACATGACCCCCGAGAGGGTGTCG
TCCATCCTCAGCGACCCCACCTGGACTAAGGCGGTGTTCTTGAGGGACCC
CGCAGAGCGCCTGCTGTCCTGCTTCCTTGACAAGATTGTGCACAGGAAAT
CCACTATCACCCTGACATGGAGAAGTACATGGTGAGGCGGAACATGACCC
CCGAGAGGGTGTCGTCCATCCTCAGCGACCCCACCTGGACTAAGGCGGTG
TTCTTGAGGGACCCCGCAGAGCGCCTGCTGTCCTGCTTCCTTGACAAGAT
TGTGCACAGGAAGTCGTACAGCGTGTCGGTGTTTCGAGCCAACGACTTCC
TTTCGTTCGAGCGTTTCGTCGCCCTGACCTCCAAGGACGCCCAAGCAAGG
TCGTACAGCGTGTCGGTGTTTCGAGCCAACGACTTCCTTTCGTTCGAGCG
TTTCGTCGCCCTGACCTCCAAGGACGCCCAAGCAAGATTTCAGGAGCAGT
ACCCCGGAGGCAACCTTGGGCTCTCTCGGAGGAGCAACCCTCACTGGAAA
CCGCAGATTTCAGGAGCAGTACCCCGGAGGCAACCTTGGGCTCTCTCGGA
GGAGCAACCCTCACTGGAAACCGCAGCTGTACTTCGGGCTGGATAAGTTC
CTCCCGTACTTCGACTTCATAGGCGACTTCAAGCACGTGGGGGCGCATTC
CGAGGCCCTCCTGAGGCGGGCAGGCCTGTGGGATGAATTCGGCGCCTCTG
GCTGGGGTCCCGGGGGGGACGCGGCATTTTTCCAGCGCTGTACTTCGGGC
TGGATAAGTTCCTCCCGTACTTCGACTTCATAGGCGACTTCAAGCACGTG
GGGGCGCATTCCGAGGCCCTCCTGAGGCGGGCAGGCCTGTGGGATGAATT
CGGCGCCTCTGGCTGGGGTCCCGGGGGGGACGCGGCATTTTTCCAGCGGA
GCACCGTGCAGGGCCACGCCACAGGAAGCCACGATTCCAAGAGCCAGTAC
TATACACCTCCTCTGTTGGCCTCCGTCCGAGAGGCATACGCCCCGACTGA
TTACAGAATGCTGGCCGGTCTCGGCTGGTGGAACGAGACCACGCGATATG
AACACAGTAGTGATGATATACCTACATGAGAGCACCGTGCAGGGCCACGC
CACAGGAAGCCACGATTCCAAGAGCCAGTACTATACACCTCCTCTGTTGG
CCTCCGTCCGAGAGGCATACGCCCCGACTGATTACAGAATGCTGGCCGGT
CTCGGCTGGTGGAACGAGACCACGCGATATGAACACAGTAGTGATGATAT
ACCTACATGA
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