mRNA_L-elsbetiae_contig578.14193.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig578.14193.1
Unique NamemRNA_L-elsbetiae_contig578.14193.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN)

HSP 1 Score: 251 bits (640), Expect = 1.190e-70
Identity = 152/330 (46.06%), Postives = 187/330 (56.67%), Query Frame = 2
Query:    5 LPPVNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDITSGP---CALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG-ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGA 979
            L PV+LGT       R AT  +AG   TC L ++G V C+G    G LG   +  +G    + GD L  VD G   T  A  I +G    CAL DDG+VKCWGNN  GQ G   + DIG   G+MGD LP V LG+         AT +++G  H CA++D G         VKCWG  + G LG G +   G+   E+GDNL   +LG    A  +  G  HTC LL DGTVKCWG  + G LG GD    GD PGEMG NLP V LG GRTA+ ++ G+  SCAVLD+GGVKCWG G  G+LGQG++   GDE GEM + L  +DL A
Sbjct:  100 LHPVDLGT------GRTATAVSAGWLHTCALLDNGTVKCWGNGGSGRLGQGSTDTIGDSTAERGDGLPTVDLGTGRTATA--IAAGQQYTCALLDDGTVKCWGNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLGTGRT------ATAISAGSSHTCALLDDGT--------VKCWGSGSFGRLGYGDLTKRGDGAGEMGDNLPPLELGTGRTATAVSAGNTHTCALLDDGTVKCWGGGFNGQLGTGDVTGLGDNPGEMGDNLPPVDLGSGRTAIAIAAGSRASCAVLDDGGVKCWGYGFSGRLGQGDTTDRGDEPGEMGDNLPPIDLPA 407          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A6H5L5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B3_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 5.340e-69
Identity = 150/339 (44.25%), Postives = 195/339 (57.52%), Query Frame = 2
Query:   14 VNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEH-SGDVGKDP-KDMGDSLEFVDFGANHTGRAVDITSGP---CALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG-ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAGVLAAAPALV 1009
            V+LGT P+ +    A     G +FTCVL E G V CFGRND G+ G  +   +VG +  +DMGD+L +VD GA    +A+ ++SG    CA    G VKCWG N YG  GV  S ++G +  DMGD L  V LG+   G        VA G RH CAI+         G  VKCWG N  G LG+GHV  +G+D  E+GD+L   DLGA   A  +  G  H+C +L DG+ +CWGK + G LG G++  RG + GEMGA L  V LG   TA  ++ G DF+CA LD+G VKCWG  + G LG G++   GD   EM + L A+DLG GV  A+  +V
Sbjct:  179 VDLGTAPSGNGTAVAVAITTGQQFTCVLVEGGGVKCFGRNDEGQCGRGNLDTNVGSNGLEDMGDNLPYVDLGAGV--QAISVSSGTASTCAALLGGGVKCWGGNSYGGLGVGDSYNVGDEEDDMGDNLQEVDLGTGETGY------YVAYGLRHACAIL--------MGGNVKCWGDNRSGQLGLGHVDTIGDDPSEMGDDLPYVDLGAGNTATSLSLGESHSCAILGDGSTRCWGKGFAGQLGRGEYYCRGKYVGEMGAGLAAVDLGTNATASFLAAGADFTCAGLDDGSVKCWGLNELGALGLGDTDSRGDGAAEMGDALPAIDLGTGVTVASDIVV 501          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A840I6P4_9ACTN (Alpha-tubulin suppressor-like RCC1 family protein/outer membrane protein OmpA-like peptidoglycan-associated protein n=1 Tax=Conexibacter arvalis TaxID=912552 RepID=A0A840I6P4_9ACTN)

HSP 1 Score: 254 bits (648), Expect = 5.890e-69
Identity = 153/334 (45.81%), Postives = 193/334 (57.78%), Query Frame = 2
Query:    5 LPPVNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDI-TSGPCALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG-ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAGVLAAA 997
            LP V LG+       R AT  AAG+   C L +DG V C+G N+ G LG+  +   G  P +MGD+L  VD G+  T  A+   +S  CAL DDGSVKCWG N  GQ G       G Q G++GDALP V LGS         AT +A+G  H+CA++  G         VKCWG N  G LG+G     G+   ELGD L   DLG+   A+ +  G DH+C LL DGT++CWG N  G LGLGD   RGD PGE+G  LP V LG  RTA  ++ G+  +CA+LD+  VKCWG    G+LGQG++   GD+ GEM + L AVDLG+G  A A
Sbjct:  509 LPAVELGS------GRAATAIAAGSSHACALLDDGTVKCWGANNGGRLGLGDTAARGDAPGEMGDALPPVDLGSGRTATAIAAGSSHACALLDDGSVKCWGANASGQLGQGDRAARGGQPGELGDALPPVDLGSG------ATATAIATGSHHSCALLADGT--------VKCWGDNGSGQLGLGDTEPRGDQPGELGDALPPVDLGSRRTAVAVSAGRDHSCALLDDGTIRCWGGNSDGQLGLGDTEPRGDQPGELGDALPPVDLGSRRTATAIAPGHRQTCALLDDATVKCWGRNADGQLGQGDTAARGDQPGEMGDALAAVDLGSGRSATA 822          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A2E8LE46_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LE46_9ACTN)

HSP 1 Score: 247 bits (630), Expect = 8.700e-69
Identity = 148/331 (44.71%), Postives = 190/331 (57.40%), Query Frame = 2
Query:    5 LPPVNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDITSGP-CALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGA---VGALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAG 982
            LP V+LG+       R AT  AAG   TC L +D  V C+G+N YG+LG+  + D G     MGD+L  VD G+  T  A+   S   CAL DD S+KCWG N  GQ G+  + D G  A +MG+ LP V LGS         AT + +G  H CA++D           +KCWG+N  G LG G     G+  DE+GDNL   DLG+     A+  DG +  TC LL D +VKCWG+N  G LG GD   RGD  G+MG NLP V LG GRTA+ ++ G+ F+CA+LD+  VKCWG  D+G+LG G++   GD  GEM   L  VDLG+G
Sbjct:  102 LPAVDLGS------GRTATAIAAGYYTTCALLDDASVKCWGQNQYGQLGLGDTNDRGDGFGLMGDNLPAVDLGSGRTATAITAKSSHFCALLDDASIKCWGRNATGQLGLGDTNDRGDGADEMGENLPAVDLGSGRT------ATAITAGSAHFCALLDD--------ASMKCWGQNQFGQLGQGDTLSRGDTADEMGDNLPAVDLGSGRTAIAISADGNV--TCALLDDASVKCWGRNNEGQLGQGDQLRRGDIAGQMGDNLPAVDLGSGRTAIVITAGSMFTCALLDDASVKCWGYNDEGQLGLGDTNDRGDGAGEMGNNLPTVDLGSG 410          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 240 bits (613), Expect = 9.350e-69
Identity = 142/329 (43.16%), Postives = 180/329 (54.71%), Query Frame = 2
Query:    5 LPPVNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDITS-GPCALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG-ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAG 982
            LP + LGT       R AT  + G   TC L ++G V C+G N YG+LG+  + D G  P +MGD+L  +  G   T  A+ +     CAL D+GS+KCWG N YGQ G+  +   G   G+MGD LP + LG+         A  +++G  H CA++D G         VKCWG N  G LG+G      +   E+GD L    LG    A  +  G  HTC LL +G VKCWG N  G LGLGD   RG+ PGEMG  LP + LG GRTAM +  G   +CA+LDNG VKCWG    G+LG GN+   GD  GEM + L AV LG G
Sbjct:  153 LPAITLGT------GRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRT------AKAISAGGYHTCALLDNG--------SVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGRTAMAIFAGGYHTCALLDNGSVKCWGYNGNGQLGLGNTSDRGDGPGEMGDMLPAVSLGMG 461          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: L7UHS0_MYXSD (RCC1 repeat-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) TaxID=1278073 RepID=L7UHS0_MYXSD)

HSP 1 Score: 234 bits (598), Expect = 8.070e-68
Identity = 148/332 (44.58%), Postives = 190/332 (57.23%), Query Frame = 2
Query:    5 LPPVNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDITSG---PCALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG--ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAG 982
            LP V LGT       +K T  + G  FTC L E G V C+GRN  G+LG+  + + G  P++M D+L FVD G     +A  + +G    CA+ +DG+VKCWG N+ GQ G+    + G   G MGDALP V LG+      +  A  + +G  H+CAI+D G         VKCWG N  G LG+G     G + DE+GD L    LG VG  A  +  G  HTC +L DG VKCWG N  G LGLGD   RGD PGEMG  LP+V LG GRTA  +S G  +SCA+LD+  +KCWG  D G LG G+ +  G+  G+M E+L  V+LG G
Sbjct:    5 LPFVGLGT------KQKVTTLSIGGSFTCALLESGVVKCWGRNTEGQLGLGDTVNRGAGPREMDDALAFVDLGVGRVAKA--LATGYEHACAILEDGAVKCWGYNMNGQLGLGVRSNHGDSQGSMGDALPTVNLGT------KRTAKAITAGRAHSCAILDDGA--------VKCWGGNEYGQLGLGDKASRGVEPDEMGDALPEVKLG-VGRTATAIAAGNLHTCAILDDGAVKCWGDNGYGRLGLGDKSGRGDAPGEMGDALPSVDLGTGRTAKAISLGYYYSCALLDDDTLKCWGFND-GILGLGDMESRGERRGQMGESLPRVNLGTG 312          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A7C1YL65_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YL65_9ACTN)

HSP 1 Score: 241 bits (614), Expect = 1.000e-67
Identity = 145/312 (46.47%), Postives = 181/312 (58.01%), Query Frame = 2
Query:   71 AGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDI-TSGPCALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG-ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAGVLAAA 997
            AG   TCV+TE G V C+G N  G+LG   + D G +P +MG +L  VD GA  T  A+   T+  CAL D+ +VKCWGNN+ GQ G   +   G   G+MGD LP + L     G     AT +++   H CA++  G         VKCWG N  G LG GH  D+G++  E+G+NL   DLGA   A  +  G  HTC LL + TVKCWG N  G LG G     GD PGEMG NLP V LG GRTA  ++ G+  +CA+LDN  VKCWG G  G LG G+S + GD+ GEM + L AVDLGAG  A A
Sbjct:   51 AGGNSTCVVTETGAVKCWGSNSSGQLGQGDNTDRGDNPGEMGANLPAVDLGAGRTATAITAGTNHTCALLDNDTVKCWGNNVLGQLGQGDANSRGGDPGEMGDNLPTINLSRG--GT----ATAISTSGVHTCALLHNGT--------VKCWGYNLNGGLGQGHTDDIGDNPGEMGNNLPPIDLGAGRTATAITAGDSHTCALLDNSTVKCWGDNSYGQLGQGTTDDIGDNPGEMGDNLPPVDLGAGRTATAITAGSFHTCALLDNNTVKCWGYGSFGGLGYGDSVKRGDDPGEMGDNLPAVDLGAGRTATA 348          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: UPI001F24619B (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F24619B)

HSP 1 Score: 245 bits (625), Expect = 1.000e-67
Identity = 150/334 (44.91%), Postives = 191/334 (57.19%), Query Frame = 2
Query:    5 LPPVNLGTIPATSEVRKATKAAAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDIT-SGPCALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVGALR-MDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAGVLAAA 997
            LP V LGT       +KAT    G  FTC L   G + C+G N+ G+LG+  +   G  P +MGD+L  V  G   T +A+ +  S  CAL DDG+VKCWG N+YGQ G+      G   G+MGDALP V LG+      +    L+A G  H+CA++D           VKCWG+N  GNLG+G   + G++ DE+GD L   DLGA    + +  G   TC  L DG+VKCWG N  G LGLGD   RGD PGEMG  LP V  G GRTA  +S G  ++CA+LDN  VKCWG   +G LG G++ + GDE GEM + L  VDLG G  A +
Sbjct:  419 LPFVQLGT------GQKATALGLGDRFTCALLASGAIKCWGINNSGQLGLGDTAHRGDGPGEMGDTLPPVALGTGRTAKALAVGGSHACALLDDGAVKCWGYNVYGQLGLGDRQTHGDGPGEMGDALPAVDLGTG-----RTAKALIA-GSTHSCALLDDDT--------VKCWGENADGNLGLGDTRNRGDNPDEMGDALPAVDLGAGRTAKALTIGQGFTCASLDDGSVKCWGANGYGQLGLGDMENRGDGPGEMGDALPPVDFGTGRTAKALSAGMTYTCALLDNATVKCWGVA-RGSLGLGDTARRGDEPGEMGDALPPVDLGTGRTATS 731          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A4U1JAV6_9DELT (Uncharacterized protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JAV6_9DELT)

HSP 1 Score: 240 bits (613), Expect = 1.200e-67
Identity = 141/315 (44.76%), Postives = 176/315 (55.87%), Query Frame = 2
Query:   68 AAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDITSGP---CALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVGALR-MDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAGVLAAA 997
            +AG  FTC +  D +  C+G    G +G E   D+G +P +MG  L  V  G     R VD+ S     C L  DG VKCWGNN  G  G+  S  +G + GDMGDALP V LG+         A  +A+G  H CA++  G        +VKCWG  T G LG+G + D G++  E+GD L   DLGA   +R + GG  H+C LL DG VKCWG  + G LG GD  TRGD PGEMG  LP + LG G  A+ ++     +CA+L  G VKCWG G  G  GQG+S   GDE GEM + L AVDLG GV A A
Sbjct:  171 SAGGGFTCAVLPDEKARCWGSASSGRIGSEEFEDLGDEPGEMGKHLRAVKLGEG--ARVVDVVSSSGRTCVLLRDGRVKCWGNNSNGVLGLGHSKSVGDEPGDMGDALPFVDLGTG------ATAVSIAAGVSHICALLADG--------RVKCWGYGTYGALGLGDMKDRGDEPGEMGDALPAVDLGAGAVVRAISGGQYHSCALLADGRVKCWGHGFSGQLGTGDKETRGDDPGEMGDALPAIDLGTGAKALAIAAWGQHTCALLHEGRVKCWGNGINGSTGQGDSLSRGDEPGEMGDVLPAVDLGVGVTAIA 469          
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Match: A0A7C1YKS1_9ACTN (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YKS1_9ACTN)

HSP 1 Score: 242 bits (617), Expect = 1.840e-67
Identity = 139/316 (43.99%), Postives = 182/316 (57.59%), Query Frame = 2
Query:   68 AAGTEFTCVLTEDGQVGCFGRNDYGELGIEHSGDVGKDPKDMGDSLEFVDFGANHTGRAVDIT-SGPCALFDDGSVKCWGNNLYGQTGVPGSVDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPAVGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVG-ALRMDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTVFLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDELGEM-ETLGAVDLGAGVLAAAPAL 1006
            +AGT  TC +  D Q+ C+G+   G+LG   +  +G +P +MGD+L  +D G  HT   V  T S  CA+ DDGS+KCWGNN  G  G   + ++G Q  +MGD LP + LG+         A +V  G  H CA++D G         VKCWG NT G LG GH +D+G++  E+GDNL + DLG    A+ +  G  HTC +L DG++KCWG N    LGLGD + RGD PGEMG NLP V LG GRTA+ VS   + +C +LDNG  KCWG    G+LG G     G     M + L  VDLG G  A + A+
Sbjct:   46 SAGTGNTCAIDTDLQLRCWGQGTNGQLGQGSTTSIGDNPGEMGDNLPAIDLGTGHTAARVATTYSRTCAILDDGSLKCWGNNFGGSLGQGNTNNLGDQPNEMGDNLPSIDLGTGRT------AVMVVGGLSHVCALLDNGT--------VKCWGHNTAGQLGQGHTNDIGDNPGEMGDNLPSIDLGTGRTAVAIAAGSHHTCAILDDGSLKCWGANTSAQLGLGDAQNRGDQPGEMGDNLPAVNLGTGRTAVAVSSYFEHTCVILDNGSTKCWGNNFFGELGIGVQSGHGATPESMGDNLPVVDLGTGRTAVSLAV 347          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig578.14193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1YRK2_9ACTN1.190e-7046.06Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A6H5L5B3_9PHAE5.340e-6944.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A840I6P4_9ACTN5.890e-6945.81Alpha-tubulin suppressor-like RCC1 family protein/... [more]
A0A2E8LE46_9ACTN8.700e-6944.71Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A835T669_9CHLO9.350e-6943.16Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
L7UHS0_MYXSD8.070e-6844.58RCC1 repeat-containing protein n=1 Tax=Myxococcus ... [more]
A0A7C1YL65_9ACTN1.000e-6746.47Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
UPI001F24619B1.000e-6744.91Ig-like domain-containing protein n=1 Tax=Myxococc... [more]
A0A4U1JAV6_9DELT1.200e-6744.76Uncharacterized protein n=1 Tax=Polyangium fumosum... [more]
A0A7C1YKS1_9ACTN1.840e-6743.99Fibronectin type-III domain-containing protein (Fr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig578contigL-elsbetiae_contig578:7351..10817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.8
Seed ortholog evalue4.6e-51
Seed eggNOG ortholog2880.D7FZ17
Preferred nameRCCD1
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1880
Cds size1134
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig578.14193.1prot_L-elsbetiae_contig578.14193.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig578 7907..10198 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816619.6162791-UTR-L-elsbetiae_contig578:7350..79061622816619.6162791-UTR-L-elsbetiae_contig578:7350..7906Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 7351..7906 -
1691683689.6349432-UTR-L-elsbetiae_contig578:7350..79061691683689.6349432-UTR-L-elsbetiae_contig578:7350..7906Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 7351..7906 -
1622816619.7081351-UTR-L-elsbetiae_contig578:10198..102101622816619.7081351-UTR-L-elsbetiae_contig578:10198..10210Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 10199..10210 -
1691683689.7241971-UTR-L-elsbetiae_contig578:10198..102101691683689.7241971-UTR-L-elsbetiae_contig578:10198..10210Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 10199..10210 -
1622816619.719354-UTR-L-elsbetiae_contig578:10443..105091622816619.719354-UTR-L-elsbetiae_contig578:10443..10509Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 10444..10509 -
1691683689.7343588-UTR-L-elsbetiae_contig578:10443..105091691683689.7343588-UTR-L-elsbetiae_contig578:10443..10509Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 10444..10509 -
1622816619.7297397-UTR-L-elsbetiae_contig578:10705..108171622816619.7297397-UTR-L-elsbetiae_contig578:10705..10817Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 10706..10817 -
1691683689.746082-UTR-L-elsbetiae_contig578:10705..108171691683689.746082-UTR-L-elsbetiae_contig578:10705..10817Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig578 10706..10817 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816619.6295292-CDS-L-elsbetiae_contig578:7906..80281622816619.6295292-CDS-L-elsbetiae_contig578:7906..8028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 7907..8028 -
1691683689.6490545-CDS-L-elsbetiae_contig578:7906..80281691683689.6490545-CDS-L-elsbetiae_contig578:7906..8028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 7907..8028 -
1622816619.642106-CDS-L-elsbetiae_contig578:8309..86241622816619.642106-CDS-L-elsbetiae_contig578:8309..8624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 8310..8624 -
1691683689.6601431-CDS-L-elsbetiae_contig578:8309..86241691683689.6601431-CDS-L-elsbetiae_contig578:8309..8624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 8310..8624 -
1622816619.655335-CDS-L-elsbetiae_contig578:8936..90571622816619.655335-CDS-L-elsbetiae_contig578:8936..9057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 8937..9057 -
1691683689.6702316-CDS-L-elsbetiae_contig578:8936..90571691683689.6702316-CDS-L-elsbetiae_contig578:8936..9057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 8937..9057 -
1622816619.6702049-CDS-L-elsbetiae_contig578:9276..95231622816619.6702049-CDS-L-elsbetiae_contig578:9276..9523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 9277..9523 -
1691683689.6810627-CDS-L-elsbetiae_contig578:9276..95231691683689.6810627-CDS-L-elsbetiae_contig578:9276..9523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 9277..9523 -
1622816619.683743-CDS-L-elsbetiae_contig578:9733..99551622816619.683743-CDS-L-elsbetiae_contig578:9733..9955Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 9734..9955 -
1691683689.691673-CDS-L-elsbetiae_contig578:9733..99551691683689.691673-CDS-L-elsbetiae_contig578:9733..9955Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 9734..9955 -
1622816619.6958373-CDS-L-elsbetiae_contig578:10091..101981622816619.6958373-CDS-L-elsbetiae_contig578:10091..10198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 10092..10198 -
1691683689.7123182-CDS-L-elsbetiae_contig578:10091..101981691683689.7123182-CDS-L-elsbetiae_contig578:10091..10198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig578 10092..10198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig578.14193.1

>prot_L-elsbetiae_contig578.14193.1 ID=prot_L-elsbetiae_contig578.14193.1|Name=mRNA_L-elsbetiae_contig578.14193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=378bp
MGDSLEFVDFGANHTGRAVDITSGPCALFDDGSVKCWGNNLYGQTGVPGS
VDIGVQAGDMGDALPVVPLGSSPPGAPQVPATLVASGWRHNCAIVDPGPA
VGGTGVQVKCWGKNTQGNLGVGHVHDLGNDEDELGDNLENTDLGAVGALR
MDGGLDHTCTLLLDGTVKCWGKNYRGALGLGDFRTRGDFPGEMGANLPTV
FLGDGRTAMDVSCGNDFSCAVLDNGGVKCWGAGDQGKLGQGNSQQLGDEL
GEMETLGAVDLGAGVLAAAPALVLPTPAPTGAPTTAPSTAPPTVALPAPV
SDGDAVDQQPSATAPPSEDGDDESVATPAPVAVEINRSSTASDEDNWNSA
AIYIAAPLGAVALMAGGFFAYKHTNRT*
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mRNA from alignment at L-elsbetiae_contig578:7351..10817-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig578.14193.1 ID=mRNA_L-elsbetiae_contig578.14193.1|Name=mRNA_L-elsbetiae_contig578.14193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3467bp|location=Sequence derived from alignment at L-elsbetiae_contig578:7351..10817- (Laminarionema elsbetiae ELsaHSoW15)
AGGACTGCCTCCGGTCAATCTTGGTACGATTCCCGCTACAAGCGAAGTTC GCAAGGCCACGAAAGCCGCGGCCGGGACAGAGTTCACCTGCGTCCTCACT GAGGATGGTCAGGTAAGGCTACCCGAGCTAACTTCGCCCTTCCATCATGG CAGCGCTTCATAGACTAATTGACAGACTGGCACGACACGCCGTACGGGAT TCTTTCTTCCATCTGTATATATGCCTGATAATCTCGAAGACCGGGTGAAG CCGGTCCAAGGCCATTAAACAATAGTCCTCGACACAAAACTGCACATCAT CACCCCAGGTGGGATGCTTTGGCCGAAATGACTACGGGGAGCTGGGAATC GAGCACTCCGGGGACGTCGGAAAGGTAGGGGAGCTCTGTCACGTTTCTTC TCCCTCAAGTGCTTCCTGATCAAACCGGTTTGAGCGTAATCTCCTCCAAA AACGGCGATATTTCATTCGAAGTGAATGCTTCGTTTGCTGTCGCGGTATC TAGCAAAATGCGCACGGGTCAAAACAACGGCGGTTTTTGGTGTGTTTGCC GCCAGGCCCCTTCGCTCGCCCTTGTAACGAACAGCCGCCCAACTTGCCGC CTGACAGGACCCGAAGGACATGGGGGACAGCTTGGAGTTCGTCGACTTCG GAGCCAACCACACCGGCCGCGCCGTAGACATCACTTCCGGACCTTGCGCA CTCTTCGATGACGGCAGCGTCAAATGGTACGTTTATAATACACGATCACT TCTCACACGATCAACTTTTTCATTCATCGAAATCGCCGCCAAATTGCAAT TTTTTCTTCACTTCGCCTTAACTCCGCGCGCCGCCGTTGCAACATTGTGG TTTTCTCCGCAGCTGGGGCAACAACCTGTACGGCCAGACCGGTGTACCCG GCTCCGTCGATATCGGAGTCCAGGCGGGCGACATGGGCGACGCGCTTCCG GTTGTCCCACTAGGCTCGAGCCCCCCCGGGGCCCCGCAAGTGCCCGCGAC CCTGGTGGCTTCTGGCTGGCGCCACAACTGCGCAATCGTTGACCCCGGAC CAGCGGTTGGAGGAACCGGAGTCCAGGTCAAATGGTGAGACTACTCTTGC CTGCACCGTTGAACGTTGCATGCACTGAAATAAGTGTTTAGTTGGAGAAA GATCTTGCGTATTCAAAGGTAGTTCAGAAAGATCGCGCGCAGTGAGCCCT CTCCCATCAAACGTTGCAGCCCATCAAGAGCATGTTTCGCTGCACGCACT GAAAAATGTATGTTTTCTGATGTCTTTTGGGCCGTGTGCGGCAGCTGGGG GAAAAACACCCAGGGCAATCTTGGAGTCGGACACGTGCACGACCTGGGTA ACGACGAGGACGAATTGGGAGACAACCTCGAGAACACTGATCTCGGCGCC GTCGGCGCCCTTCGCATGGACGGAGGGCTTGACCACACCTGCACCCTCCT GCTGGACGGGACTGTGAAGTGCTGGGGCAAGAATTACAGGGGTGCCCTCG GCCTGGGGGACTTCAGGACCCGCGGCGACTTTCCCGGAGAAGTACGTGTT ACTTACTTTTACATACGTGCATTTGCGATGTGGTTGCGCTCGGTTATGCT CCGTTGCTGTCGGGCCAAGGCAGGCAGACCCATATATATGCGATGTGGTT GCGCTCCGTTTGTCAGGACAGATCATGTAATAAGCAGCTCAAAGTCACTT ACTGAACTTACGTTTACGTCTTCGTCTCCTCCGTTTGTTGGTTCTGGCCT GAAAAACAAGATGGGAGCCAACCTGCCCACTGTGTTTCTCGGGGACGGGC GCACGGCGATGGACGTTTCTTGCGGCAACGACTTCTCGTGCGCCGTGCTG GACAACGGTGGGGTCAAGTGCTGGGGCGCAGGTACATACGCGGGCGTTTT CAGCCCTTCCCTCCGCGATGATGCTCGTTGGGTACTGCTGTGGCCACCAC CCTCCCAACCGTGCACATGTTGTGCATGCACCCCCCCAGACTTGTGCATG CACCCCCCCAGACTTGGGACAGAAGAGTTGGCTGCGTTTTGTATCGCCTT CATTTCCTCTCTGGGCAAATAATTCTCAGGGCACCCTGACAATGGTTGCC CCCCTCCCGTGCCCTACGTTCGCTCAACTAAGCAGCTCCCTCTTTTTGAC ACTTTTATTTTTACTGTGACTCTTTGATCTCGCCATCCCGCAGGGGACCA GGGGAAGCTGGGCCAGGGCAACTCGCAGCAGCTGGGGGACGAGCTCGGCG AGATGGAGACACTAGGCGCGGTAGACCTCGGGGCGGGTGTTCTCGCCGCC GCCCCCGCCCTCGTCCTTCCCACCCCGGCTCCGACCGGTGCCCCGACGAC TGCGCCGTCCACGGCACCGCCCACCGTAGCTCTCCCCGCGCCTGTCTCTG ATGGCGACGCGGTGGACCAGCAGCCATCGGCGACGGCCCCTCCTAGCGAG GACGGGGACGATGAGTCGGTGGCAACCCCGGCACCAGTCGCTGTCGAGAT CAACCGATGTGAGTGTAGGGGGGTACTACTGTAGCAGAGGTAAAAATAGT GTTGGAACGTTGTAGTTGTTCGAGCACCCGCTTCCCCGCCCCTTCGACGT CTTGCGCGCCACCCTGGCCACCTACATACATAGTTCCCGTTCATATCAAG CGATGCCCTGCTAATATGCAGATGATTTTTACGTGACGGTTACCTTCGTC AAAGAGAAGCGGCTGCATTGTTTGCTAATAATAGATATATCTAACACGCC CTGATCCGTCCTTGCTCTCGCCAAATACGAACTTGGCAGCAAGCACCGCC AGCGACGAGGATAACTGGAACTCGGCTGCGATTTACATCGCCGCTCCGCT TGGAGCAGTCGCTCTCATGGCGGGGGGCTTCTTCGCCTACAAGCACACGA ACCGCACCTAGGCTAACAAAGCAGTGGCAAACGAAGCTGTAGGGCCGGTG GCCGGAGTTTTTTTTGTGTGTGTTTTTTGTGTCCTGTCTGTCTGGCGCGT AGCGGATATATATCAGAGTGCGGGTGATAAGAATATGGTACATAAATACA TAGTCTAGCATGCGTTCCACCGTGGAGCGTGAACGAGCGTAGCGTAGTTC GCCTAAATTGTACTCCGTTGTATGTATGTTGGTTAGATAACACAACCTTG GTTGTTGCTGGAATTTTTTCCGAGGTTATATAAATCCACACGGCGGCCTT GGTCGTTGGTGGTTGTGAGATATTTGTCAGGGTCGAGGGCTAAGAAGCAG GGGGGCGGCGTCTTTTTATTTGGGAGCTCCTCCTTCGGTAGAATAGTGTG ATGTGGTAAGGCGCGGTTTATTTTATGAAGGTATCAAGTGTAAGTGATGA CGTTAACGATAAAAACAAAAACTGATAAATTTTTTCTCAAGGCTACATAT CAGCCTGAAGATTTTGTCTATCTACTAAAATGAATTGGGAGCGCTGCAGC GTCTCCTTCACTTTCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig578:7351..10817-

>mRNA_L-elsbetiae_contig578.14193.1 ID=mRNA_L-elsbetiae_contig578.14193.1|Name=mRNA_L-elsbetiae_contig578.14193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2268bp|location=Sequence derived from alignment at L-elsbetiae_contig578:7351..10817- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGGACAGCTTGGAGTTCGTCGACTTCGGAGCCAACCACACCGGCCG
CGCCGTAGACATCACTTCCGGACCTTGCGCACTCTTCGATGACGGCAGCG
TCAAATGATGGGGGACAGCTTGGAGTTCGTCGACTTCGGAGCCAACCACA
CCGGCCGCGCCGTAGACATCACTTCCGGACCTTGCGCACTCTTCGATGAC
GGCAGCGTCAAATGCTGGGGCAACAACCTGTACGGCCAGACCGGTGTACC
CGGCTCCGTCGATATCGGAGTCCAGGCGGGCGACATGGGCGACGCGCTTC
CGGTTGTCCCACTAGGCTCGAGCCCCCCCGGGGCCCCGCAAGTGCCCGCG
ACCCTGGTGGCTTCTGGCTGGCGCCACAACTGCGCAATCGTTGACCCCGG
ACCAGCGGTTGGAGGAACCGGAGTCCAGGTCAAATGCTGGGGCAACAACC
TGTACGGCCAGACCGGTGTACCCGGCTCCGTCGATATCGGAGTCCAGGCG
GGCGACATGGGCGACGCGCTTCCGGTTGTCCCACTAGGCTCGAGCCCCCC
CGGGGCCCCGCAAGTGCCCGCGACCCTGGTGGCTTCTGGCTGGCGCCACA
ACTGCGCAATCGTTGACCCCGGACCAGCGGTTGGAGGAACCGGAGTCCAG
GTCAAATGCTGGGGGAAAAACACCCAGGGCAATCTTGGAGTCGGACACGT
GCACGACCTGGGTAACGACGAGGACGAATTGGGAGACAACCTCGAGAACA
CTGATCTCGGCGCCGTCGGCGCCCTTCGCATGGACGGAGGGCTTGACCAC
ACCTGCACCCTCCTGCTGGACGGGACTGTGAAGTGCTGGGGCAAGAATTA
CAGGGGTGCCCTCGGCCTGGGGGACTTCAGGACCCGCGGCGACTTTCCCG
GAGAACTGGGGGAAAAACACCCAGGGCAATCTTGGAGTCGGACACGTGCA
CGACCTGGGTAACGACGAGGACGAATTGGGAGACAACCTCGAGAACACTG
ATCTCGGCGCCGTCGGCGCCCTTCGCATGGACGGAGGGCTTGACCACACC
TGCACCCTCCTGCTGGACGGGACTGTGAAGTGCTGGGGCAAGAATTACAG
GGGTGCCCTCGGCCTGGGGGACTTCAGGACCCGCGGCGACTTTCCCGGAG
AAATGGGAGCCAACCTGCCCACTGTGTTTCTCGGGGACGGGCGCACGGCG
ATGGACGTTTCTTGCGGCAACGACTTCTCGTGCGCCGTGCTGGACAACGG
TGGGGTCAAGTGCTGGGGCGCAGATGGGAGCCAACCTGCCCACTGTGTTT
CTCGGGGACGGGCGCACGGCGATGGACGTTTCTTGCGGCAACGACTTCTC
GTGCGCCGTGCTGGACAACGGTGGGGTCAAGTGCTGGGGCGCAGGGGACC
AGGGGAAGCTGGGCCAGGGCAACTCGCAGCAGCTGGGGGACGAGCTCGGC
GAGATGGAGACACTAGGCGCGGTAGACCTCGGGGCGGGTGTTCTCGCCGC
CGCCCCCGCCCTCGTCCTTCCCACCCCGGCTCCGACCGGTGCCCCGACGA
CTGCGCCGTCCACGGCACCGCCCACCGTAGCTCTCCCCGCGCCTGTCTCT
GATGGCGACGCGGTGGACCAGCAGCCATCGGCGACGGCCCCTCCTAGCGA
GGACGGGGACGATGAGTCGGTGGCAACCCCGGCACCAGTCGCTGTCGAGA
TCAACCGATGGGACCAGGGGAAGCTGGGCCAGGGCAACTCGCAGCAGCTG
GGGGACGAGCTCGGCGAGATGGAGACACTAGGCGCGGTAGACCTCGGGGC
GGGTGTTCTCGCCGCCGCCCCCGCCCTCGTCCTTCCCACCCCGGCTCCGA
CCGGTGCCCCGACGACTGCGCCGTCCACGGCACCGCCCACCGTAGCTCTC
CCCGCGCCTGTCTCTGATGGCGACGCGGTGGACCAGCAGCCATCGGCGAC
GGCCCCTCCTAGCGAGGACGGGGACGATGAGTCGGTGGCAACCCCGGCAC
CAGTCGCTGTCGAGATCAACCGATCAAGCACCGCCAGCGACGAGGATAAC
TGGAACTCGGCTGCGATTTACATCGCCGCTCCGCTTGGAGCAGTCGCTCT
CATGGCGGGGGGCTTCTTCGCCTACAAGCACACGAACCGCACCTAGCAAG
CACCGCCAGCGACGAGGATAACTGGAACTCGGCTGCGATTTACATCGCCG
CTCCGCTTGGAGCAGTCGCTCTCATGGCGGGGGGCTTCTTCGCCTACAAG
CACACGAACCGCACCTAG
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