mRNA_L-elsbetiae_contig578.14192.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: D8LGR3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR3_ECTSI) HSP 1 Score: 238 bits (606), Expect = 2.290e-78 Identity = 115/144 (79.86%), Postives = 124/144 (86.11%), Query Frame = 1 Query: 19 PLAVAMEQLYLISAFDAEGGDGNGTKTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAYRSNDTARGFADRAADAMKESGAADADGGFDPQDQAEAYA 450 P+ LY ISAFDAEGGDGNGTK WA+FCGLISS +SG+LAFLQARGKGDM+ FQKFIALFFF+WWTLGAGIGTFKGPFTISGNGYFAGW+AFAAS+KYAY +ND RGFADRAADAMKE D D GFDPQDQAEAYA Sbjct: 8 PVLFVSSVLYTISAFDAEGGDGNGTKAWAIFCGLISSFISGILAFLQARGKGDMVHKFQKFIALFFFLWWTLGAGIGTFKGPFTISGNGYFAGWIAFAASLKYAYGTNDAVRGFADRAADAMKEHQPTDPDAGFDPQDQAEAYA 151
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A836C9Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Z2_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 8.100e-24 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 19 PLAVAMEQLYLI-SAFDAEGGDG-NGTKTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAYRSNDTARGFADRAADAM 384 PL A +Y+I S+ + + + GT +AV G++S ++ LL L+ K DM++ KF+A F F+WW +GA +GTF GPFT+ NGYF+ W F + +YAY S+D R DR A AM Sbjct: 8 PLLFAASLVYVIASSINCDNKNSCKGTDAYAVSVGMVSLGITSLLIGLRVVSKEDMLEGKHKFLATFLFLWWGVGAAVGTFDGPFTVVSNGYFSAWAGFLFATQYAYASSDVVRNVLDRGASAM 131
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A835ZAN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.030e-23 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 19 PLAVAMEQLYLISA-FDAEGGDGNGTKTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAYRSNDTARGFADRAADAMKESGAA 402 PL A +Y+I+A G++ +A+ G++S ++ LL ++A + M+ KFI+LF F+WW +GA +GTF GPFT GNGYFA W AF S +YAY ++ R DR A+A GAA Sbjct: 5 PLLFAASLVYVIAASIQCTHHTCTGSRGYAIVVGVVSLFITTLLIVIRAIKQAAMVDKMHKFISLFLFVWWGVGAAVGTFNGPFTDVGNGYFAAWAAFLFSTQYAYSASQIVRNMLDRGANAAMGGGAA 133
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A0L0G6L3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G6L3_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 1.170e-10 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 85 NGTKTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFIWWTLGAGIGTFKG-PFTISGNGYFAGWVAFAASVKY 327 N WA+ CG+IS++V+G++ FL K D++ + + A+F +WW G T G P+T GNGYF W+AF AS+ Y Sbjct: 29 NSNVAWAIACGVISTMVTGVILFLHFMKK-DIMMSLGIYGAIFLVLWWAAGVAFTTGAGGPYTGLGNGYFGVWIAFGASIYY 109
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A835YEI7_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YEI7_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 3.920e-8 Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 100 WAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKY 327 +AV G IS+ ++ + A L + K + F FI+ F +WW GAG+ TF+ PF + GNGY+A W+A AS+ + Sbjct: 48 YAVALGTISTFLALMHAILCSF-KPVLADKFGPFISTFLVLWWIPGAGVCTFRNPFLVPGNGYYACWIALLASLVF 122
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A0G4I317_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I317_9ALVE) HSP 1 Score: 55.5 bits (132), Expect = 8.440e-7 Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 100 WAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVA 306 +AV G +S VV LL + R + + ++++F IWW GA + TF+ PF ++GNGYFA W A Sbjct: 44 YAVAVGCVS-VVCVLLQLILNRAAKNAAPKVEPWMSVFLIIWWIPGASVLTFRSPFVVAGNGYFASWAA 111
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A7S3YKB0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YKB0_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 3.620e-6 Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 94 KTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFI-ALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAY 333 + WAV +IS + +G+ L+ D+ + I A F + W+ GAG+ TF+ PFT +GNGYFA W+A+ AS Y Sbjct: 110 RGWAVTVSVISIICTGVAIALEMYT--DVCSDIIGVIFAFFLLLLWSGGAGVLTFRAPFTATGNGYFASWLAWFASAYLVY 188
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A7S4DJZ8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DJZ8_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 5.900e-6 Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 94 KTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFI-ALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAY 333 + WAV +IS + +G+ L+ D+ + I A F + W+ GAG+ TF+ PFT +GNGYFA W+A+ AS Y Sbjct: 110 RGWAVTVSVISIICTGVAIALEMYT--DVCSDIIGVIFAFFLLLLWSGGAGVLTFRAPFTATGNGYFASWLAWFASAYLVY 188
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A7S2TU79_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TU79_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 7.390e-6 Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 1 Query: 94 KTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFIALFFFI-WWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAY 333 + WAV G++S + SG+ L D + I F+ + W+ GAG+ TF+ PFT +GNGYFA W A+ AS Y Sbjct: 106 RGWAVTVGVVSIISSGVALILDIYT--DACSDVMGVIFSFYMLALWSAGAGVLTFRAPFTRTGNGYFASWGAWLASAYLVY 184
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Match: A0A6U2XH29_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U2XH29_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 7.490e-6 Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 94 KTWAVFCGLISSVVSGLLAFLQARGKGDMIQNFQKFI-ALFFFIWWTLGAGIGTFKGPFTISGNGYFAGWVAFAASVKYAY 333 + WAV +IS + +G+ L+ D+ + I A F + W+ GAG+ TF+ PFT +GNGYFA W+A+ AS Y Sbjct: 110 RGWAVTVSVISIICTGVAIALEMYT--DVCSDIIGVIFAFFLLLLWSGGAGVLTFRAPFTATGNGYFASWLAWFASAYLVY 188 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig578.14192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig578.14192.1 >prot_L-elsbetiae_contig578.14192.1 ID=prot_L-elsbetiae_contig578.14192.1|Name=mRNA_L-elsbetiae_contig578.14192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp VVLSVCPLAVAMEQLYLISAFDAEGGDGNGTKTWAVFCGLISSVVSGLLAback to top mRNA from alignment at L-elsbetiae_contig578:2499..6211+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig578.14192.1 ID=mRNA_L-elsbetiae_contig578.14192.1|Name=mRNA_L-elsbetiae_contig578.14192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3713bp|location=Sequence derived from alignment at L-elsbetiae_contig578:2499..6211+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig578:2499..6211+ >mRNA_L-elsbetiae_contig578.14192.1 ID=mRNA_L-elsbetiae_contig578.14192.1|Name=mRNA_L-elsbetiae_contig578.14192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig578:2499..6211+ (Laminarionema elsbetiae ELsaHSoW15)back to top |