mRNA_L-elsbetiae_contig5773.14185.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: D8LL97_ECTSI (GPN-loop GTPase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL97_ECTSI) HSP 1 Score: 340 bits (871), Expect = 1.620e-117 Identity = 166/176 (94.32%), Postives = 173/176 (98.30%), Query Frame = 1 Query: 7 MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSK 534 MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRD AVINLDPANHG+GLPY AAVDIQELVSVEGVME+F+LGPNGAMLYCLEYLEKNVDWL+EKLDGLTQK+LIFDFPGQ VELFTHCFCVQNLVQRLQK+DVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPH+NVLSK Sbjct: 1 MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRDTAVINLDPANHGEGLPYAAAVDIQELVSVEGVMEEFNLGPNGAMLYCLEYLEKNVDWLMEKLDGLTQKHLIFDFPGQ-VELFTHCFCVQNLVQRLQKDDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHVNVLSK 175
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A6H5KRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ6_9PHAE) HSP 1 Score: 343 bits (880), Expect = 6.560e-115 Identity = 168/184 (91.30%), Postives = 178/184 (96.74%), Query Frame = 1 Query: 7 MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRD AVINLDPANHG+GLPY AAVDIQELVSVEGVME+F+LGPNGAMLYCLEYLEKNVDWL+EKLDGLTQK+LIFDFPGQ VELFTHCFCVQNLVQRLQK+DVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPH+NVLSKV ++ +G Sbjct: 1 MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRDTAVINLDPANHGEGLPYAAAVDIQELVSVEGVMEEFNLGPNGAMLYCLEYLEKNVDWLMEKLDGLTQKHLIFDFPGQ-VELFTHCFCVQNLVQRLQKDDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHVNVLSKVDLIEQMG 183
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A836C9S8_9STRA (GPN-loop GTPase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S8_9STRA) HSP 1 Score: 252 bits (644), Expect = 9.970e-81 Identity = 121/182 (66.48%), Postives = 147/182 (80.77%), Query Frame = 1 Query: 16 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQ-VELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 FGQ+VVGPPGSGKTT+C GM QY+ A+GR+ A+INLDPANHG+ LPY AVDI++LVS+EGVM LGPNGA++Y +E+LEKN+DWL++KL KYL+FDFPGQ VELFTH C+QN+VQ LQK D RL AVHLVDAYHC + S FIS L+SLM M+RLELPH+NVLSKV ++ G Sbjct: 14 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYG 195
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A397UA65_9GLOM (GPN-loop GTPase 2 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UA65_9GLOM) HSP 1 Score: 228 bits (582), Expect = 8.750e-72 Identity = 111/181 (61.33%), Postives = 141/181 (77.90%), Query Frame = 1 Query: 16 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 FGQVV+GPPGSGKTTYC GM Q++ A GR +V+NLDPAN LPY A+++ +L+++E VME+F LGPNG M+YC+EYLEKN+DWL EKL L Y +FDFPGQ VELFTH V+N+++RLQK D RL VHLVDA++C +PS +ISA LLSL ML++ELPHINVLSK+ ++ G Sbjct: 3 FGQVVIGPPGSGKTTYCNGMQQFLHATGRKVSVVNLDPANDF--LPYECAINMADLITLEEVMEEFKLGPNGGMMYCMEYLEKNIDWLEEKLKSLEDSYFLFDFPGQ-VELFTHHGSVKNIIERLQKLDYRLVTVHLVDAHYCTDPSKYISALLLSLKTMLQIELPHINVLSKIDIIESYG 180
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A7S2GXV3_9STRA (GPN-loop GTPase 2 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXV3_9STRA) HSP 1 Score: 223 bits (569), Expect = 2.460e-70 Identity = 107/181 (59.12%), Postives = 138/181 (76.24%), Query Frame = 1 Query: 16 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 F Q+ VGPPGSGKTT+C GM Q+++ IGRD V+NLDPAN + LPY AVD+ ELVS+ VM + LGPNGA++YC+EYLE+N+DWL++KL+ L +KY++FDFPGQ VELFTHC V +V +L D RL VHL+DA+ C +P FI+ LLSL VM+RLELPH+NVLSKV ++ G Sbjct: 27 FCQLAVGPPGSGKTTFCNGMAQFLEGIGRDVCVVNLDPAN--ENLPYVPAVDLAELVSLPAVMAEMGLGPNGALIYCMEYLEENLDWLLQKLEPLREKYILFDFPGQ-VELFTHCTSVSTIVNKLTAADYRLTVVHLIDAHLCSDPPKFIAGTLLSLTVMIRLELPHVNVLSKVDLIETYG 204
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A397U5Z3_9GLOM (GPN-loop GTPase 2 n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U5Z3_9GLOM) HSP 1 Score: 223 bits (568), Expect = 8.470e-70 Identity = 107/175 (61.14%), Postives = 138/175 (78.86%), Query Frame = 1 Query: 22 QVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVL 546 +VV+GPPGSGKTTYC GM Q++ A GR +V+NLDPAN LPY A+++ +L+++E VME+F LGPNG M+YC+EYLEKN+DWL EKL L Y +FDFPGQ VELFTH V+N+++RLQK D RL VHLVDA++C +PS +ISA LLSL ML++ELPHINVLSK+ ++ Sbjct: 30 KVVIGPPGSGKTTYCNGMQQFLHATGRKVSVVNLDPANDF--LPYECAINMADLITLEAVMEEFKLGPNGGMMYCMEYLEKNIDWLEEKLKSLEDSYFLFDFPGQ-VELFTHHGSVKNIIERLQKLDYRLVTVHLVDAHYCTDPSKYISALLLSLKTMLQIELPHINVLSKIDII 201
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A4P9WEH8_9FUNG (GPN-loop GTPase 2 n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WEH8_9FUNG) HSP 1 Score: 223 bits (568), Expect = 1.370e-69 Identity = 106/181 (58.56%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 16 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 FGQVVVGPPGSGKTTYC GM Q+ A R A ++NLDPAN G +PYT +DI EL+++E ME+F LGPNG ++YC+EYLEKN+DWL+ +L+ Y++FDFPGQ VELFTH V++++ +LQK + RL AVHLVDA+HC +PS ++S LLSL M++LELPHINVLSK+ ++ G Sbjct: 3 FGQVVVGPPGSGKTTYCHGMAQFYDATKRSAIIVNLDPANDG--MPYTPTIDISELITLEDTMEEFGLGPNGGLIYCMEYLEKNLDWLIGRLNEFKDSYVLFDFPGQ-VELFTHHTAVRSILDKLQKLNYRLCAVHLVDAHHCVDPSKYVSMVLLSLKTMIQLELPHINVLSKIDLMESYG 180
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A0L0HK84_SPIPD (GPN-loop GTPase 2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HK84_SPIPD) HSP 1 Score: 221 bits (563), Expect = 2.120e-69 Identity = 104/181 (57.46%), Postives = 141/181 (77.90%), Query Frame = 1 Query: 16 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 FGQ+VVGPPGSGKTTYC GM Q+ A RD A++NLDPAN +G+PYT ++I EL+++E M++F LGPNG ++YC+EYLEKN+DWL ++L+ + +KY++FD PGQ VELFTH V+N+V RLQK D RL HLVDA++C +PS +++ LLSL M++LELPH+NVLSKV ++ G Sbjct: 3 FGQIVVGPPGSGKTTYCHGMSQFYAATNRDVAIVNLDPAN--EGMPYTPDINISELITLEDAMKEFGLGPNGGLIYCMEYLEKNMDWLEKRLEDVKEKYILFDCPGQ-VELFTHHNSVKNIVDRLQKLDYRLCCTHLVDAHYCVDPSKYVALLLLSLKTMIQLELPHVNVLSKVDLIESYG 180
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: A0A1S8VK76_9FUNG (GPN-loop GTPase 2 n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VK76_9FUNG) HSP 1 Score: 221 bits (564), Expect = 6.190e-69 Identity = 107/182 (58.79%), Postives = 142/182 (78.02%), Query Frame = 1 Query: 16 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKE-DVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVSVLYMVG 558 FGQ+VVGPPG GKTTYC G+ Q+ +A RD A++NLDPAN G LPY A VDI ELV+++ ME++ LGPNGAM+YC+EYLE N+DWL+EKL+ L +KY++FD PGQ VEL+TH V+ ++ RL K+ D RL AVHLVD++HC +PS +++ LLSL M++LELPH+NVLSKV ++ G Sbjct: 3 FGQIVVGPPGCGKTTYCYGISQFYRATERDVAIVNLDPANDG--LPYKADVDISELVTLDDAMEEYKLGPNGAMIYCMEYLEANIDWLIEKLNPLKEKYILFDCPGQ-VELYTHHQSVKRIIDRLAKDMDFRLCAVHLVDSHHCVDPSKYVAMLLLSLKTMIQLELPHVNVLSKVDLVETYG 181
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Match: UPI0018855CEA (GPN-loop GTPase 2-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018855CEA) HSP 1 Score: 221 bits (562), Expect = 6.850e-69 Identity = 109/180 (60.56%), Postives = 140/180 (77.78%), Query Frame = 1 Query: 1 AAMVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYTAAVDIQELVSVEGVMEQFDLGPNGAMLYCLEYLEKNVDWLVEKLDGLTQKYLIFDFPGQQVELFTHCFCVQNLVQRLQKEDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHINVLSKVS 540 AA VRFGQ VVGPPGSGK+TYC GM ++++A GR AV+NLDPAN LP+ A VD+ ELV+V VM+ LGPNGA+LYC+EYLEKNVDWL++KL L KY++FDFPGQ VEL+TH V L++RL++E++RL AV+LVD+++C +P F+S L +L ML LELPHINVLSK+ Sbjct: 2 AAPVRFGQAVVGPPGSGKSTYCGGMQEFLRAAGRQVAVVNLDPANDA--LPFAADVDLAELVTVADVMQTLALGPNGALLYCMEYLEKNVDWLLKKLRPLHDKYILFDFPGQ-VELYTHNAAVPRLLRRLERENLRLTAVNLVDSHYCSDPGKFVSVLLTTLSTMLHLELPHINVLSKID 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5773.14185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5773.14185.1 >prot_L-elsbetiae_contig5773.14185.1 ID=prot_L-elsbetiae_contig5773.14185.1|Name=mRNA_L-elsbetiae_contig5773.14185.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp MVRFGQVVVGPPGSGKTTYCLGMCQYMKAIGRDAAVINLDPANHGKGLPYback to top mRNA from alignment at L-elsbetiae_contig5773:3108..4716- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5773.14185.1 ID=mRNA_L-elsbetiae_contig5773.14185.1|Name=mRNA_L-elsbetiae_contig5773.14185.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1609bp|location=Sequence derived from alignment at L-elsbetiae_contig5773:3108..4716- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5773:3108..4716- >mRNA_L-elsbetiae_contig5773.14185.1 ID=mRNA_L-elsbetiae_contig5773.14185.1|Name=mRNA_L-elsbetiae_contig5773.14185.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1134bp|location=Sequence derived from alignment at L-elsbetiae_contig5773:3108..4716- (Laminarionema elsbetiae ELsaHSoW15)back to top |