mRNA_L-elsbetiae_contig5771.14184.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: D7G7I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I2_ECTSI) HSP 1 Score: 294 bits (753), Expect = 2.060e-86 Identity = 146/202 (72.28%), Postives = 159/202 (78.71%), Query Frame = 2 Query: 8 GRRKAYRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQWVVED 613 GRR YRRIAHLKGHSSRVLHLDWT DGRFVHTCGQD H+LHW+ILP A GE RPR+FKRAFLVR+E WATWSSTIGWPVQGVFPAYSDN++VNAVD+C DR+LLAAADDAKT+RLLRYPVLRGGA +R+YTAHSSHVMGARFTVGVEPTRLIT+GGMDSTV+QWVVED Sbjct: 1473 GRRTVYRRIAHLKGHSSRVLHLDWTEDGRFVHTCGQDYHLLHWDILPPSSHRQGDDAVRDGGAGRDACNGGGDEEDDEAFA--GESRPRIFKRAFLVRNEPWATWSSTIGWPVQGVFPAYSDNTEVNAVDLCKDRELLAAADDAKTVRLLRYPVLRGGARNRSYTAHSSHVMGARFTVGVEPTRLITLGGMDSTVIQWVVED 1672
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A6H5JER7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER7_9PHAE) HSP 1 Score: 271 bits (693), Expect = 6.500e-81 Identity = 141/189 (74.60%), Postives = 153/189 (80.95%), Query Frame = 2 Query: 11 RRKAYRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGG 577 RRK YRRIAHLKGHSSRVLHLDWT DGRFVHTCGQD H+LHW+ILP XXXXXX A GE RPR+FKRAFLVR+E WATWSSTIGWPVQGVFPAYSDN++VNAVD+C DRDLLAAADDAKT+RLLRYPVLRGGA +R+YTAHSSHVMGARFTVG+EPTRLIT+GG Sbjct: 610 RRKVYRRIAHLKGHSSRVLHLDWTEDGRFVHTCGQDYHLLHWDILPPSSHRQGDGAARDGGEDRDASNGXXXXXXDEAFA--GESRPRIFKRAFLVRNEPWATWSSTIGWPVQGVFPAYSDNTEVNAVDLCKDRDLLAAADDAKTVRLLRYPVLRGGARNRSYTAHSSHVMGARFTVGLEPTRLITLGG 796
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: C1E2H3_MICCC (Uncharacterized protein n=5 Tax=cellular organisms TaxID=131567 RepID=C1E2H3_MICCC) HSP 1 Score: 114 bits (284), Expect = 4.710e-24 Identity = 75/249 (30.12%), Postives = 111/249 (44.58%), Query Frame = 2 Query: 23 YRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQWVVEDGGG*RQRLQGATQQ----GCEDEENMLCLYCIVPSIIGIFIRRLPHWPPYST 757 ++R+ KGHSS + HLDW+ D R++ T D ++ WEI PG K ++D +W +W+ST+GWPVQGV+P ++D +DVNA D ++A ADD ++L RYP G A Y HSSHV RF+ E LITVGG D QW + + + ++ ED E+ +V ++ I +P + P S+ Sbjct: 526 FKRVGVCKGHSSYITHLDWSEDSRYLQTNSGDYELMFWEI-------------------------------------PG---CEQVKFPTALKDTKWDSWTSTLGWPVQGVWPKHADGTDVNACCRSADGTVVATADDFGLVKLFRYPSDVGRADYHGYLGHSSHVTNCRFSYNDE--FLITVGGNDRCAFQWRHYEADEGDEEMTSEVEEEVLTSVEDYEDFSKTNQVVQMVMTGHINGVPQYMPLSS 732
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A7S0SF10_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SF10_9CHLO) HSP 1 Score: 113 bits (282), Expect = 8.700e-24 Identity = 74/250 (29.60%), Postives = 109/250 (43.60%), Query Frame = 2 Query: 17 KAYRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQWVVEDGGG*RQRLQGATQQ----GCEDEENMLCLYCIVPSIIGIFIRRLPHWPPYS 754 ++Y+R+ KGHSS V HLDW+ D R + T D +L WEI PG K ++D W TW++T+GWPVQGV+P ++D +DVNA D ++A ADD ++L RYP G A Y HS+HV RF+ E L+T GG D QW + + + ++ ED E+ +V ++ + +P + P S Sbjct: 563 RSYKRVGVCKGHSSYVTHLDWSEDSRHLQTNSGDYELLFWEI-------------------------------------PG---CEQIKFPAALKDTRWDTWTATLGWPVQGVWPKHADGTDVNACCRSGDGMVVATADDFGLVKLFRYPSDVGRADYHGYLGHSAHVTNCRFSYNDE--FLVTTGGSDRCAFQWRHYEADEGDEEMTSEVEEEVLTAVEDYEDFSKTNQVVQMVVTGHVNGIPQYMPLS 770
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: C1N8S3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8S3_MICPC) HSP 1 Score: 112 bits (281), Expect = 1.160e-23 Identity = 70/195 (35.90%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 17 KAYRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQW 601 + Y+R KGHSS + H+DW+ D RF+ + D +LHWE VPG + R F A +RD +W TW+ T+GWPVQG++P ++D +DVNA D ++A ADD I+L RYP G A Y HS+H ARF+ E LIT GG D QW Sbjct: 469 RGYKRAGVCKGHSSYITHIDWSEDSRFLQSNSGDYELLHWE-------------------------------------VPGCEQIR-FPAA--LRDTKWDTWTCTLGWPVQGIWPKHADGTDVNACCRSFDGQVVATADDFGLIKLFRYPSDVGRADYHGYLGHSTHATNARFSYNDE--FLITTGGHDRCAFQW 621
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A7S3MCY1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCY1_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.410e-21 Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 296 VRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQW--VVEDGGG*RQRLQGATQQGCEDEE 673 +RD +W+TW+ T+GWPVQG++ A D SD+NAV LLA +DD + L RYP ++ GA S NY AHSSHVM R+T E L++ GG D ++QW + GG R QG DEE Sbjct: 120 LRDVKWSTWTCTLGWPVQGIWAAGMDGSDINAVARSHSGHLLATSDDLGKVNLFRYPAVQAGAGSVNYAAHSSHVMNVRWTAADEC--LLSCGGNDKCLMQWRHSMTLAGGSSSRGQGLAHSDSADEE 245
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A7S0DAX2_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DAX2_MICPS) HSP 1 Score: 105 bits (261), Expect = 3.790e-21 Identity = 63/195 (32.31%), Postives = 88/195 (45.13%), Query Frame = 2 Query: 23 YRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQWVV 607 Y +IA KGHS+ H+DW+ DG + TCG D ILHW++ + + RD +AT + +G+PV GV+PA SD +DVNA+DV P ADD ++L YPVL A R Y H+ HV RF + TR+++ GG D + Q+ V Sbjct: 386 YEKIARFKGHSASARHVDWSADGATLATCGADYEILHWDV------------------------------PNKEERKENKTSQAGAQNLSSQRDRRFATRTGVLGFPVMGVWPAASDGTDVNALDVSPSGRYAVTADDGGFVKLFAYPVLAECAAHRAYRGHAGHVAMVRF--NCDGTRVVSTGGRDRSAFQFSV 548
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.360e-20 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 296 VRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQW 601 +RD+EWATW+ +GWPVQG++PA++D +D+NAV D LLA ADD +++ YP GA R T HSSHV R+ G + R+ITVGG D V QW Sbjct: 787 LRDKEWATWTCVLGWPVQGIWPAFADGTDINAVARSDDGKLLATADDFGNVKIFNYPANVQGAQYRMLTGHSSHVTNVRWVRGDQ--RVITVGGNDRGVFQW 886
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A1R2BFM7_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BFM7_9CILI) HSP 1 Score: 103 bits (257), Expect = 1.630e-20 Identity = 64/202 (31.68%), Postives = 98/202 (48.51%), Query Frame = 2 Query: 23 YRRIAHLKGHSSRVLHLDWTVDGRFVHT-CGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCP------DRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQWVV 607 +++IA +GHSS + H DW+ DG ++H+ CG +L W+ A G ++ A +++DE+W TW+ IGWPVQG++PA++D +DVNAVD + ++LA +DD +++ RYP L G+ HSSHV RF+ + + T GG D V QW V Sbjct: 1633 FKQIAVCRGHSSFITHFDWSCDGNYLHSNCGA-YELLFWD------------------------------------ANNGR---QLTSGATMLKDEQWHTWTCVIGWPVQGIYPAFADGTDVNAVDRSKIKFGNKEYEILATSDDFGLVKVFRYPCLTKGSEGVIGRGHSSHVTNVRFSP--DDAYIFTTGGDDQCVFQWKV 1792
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Match: A0A077ZRL8_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZRL8_STYLE) HSP 1 Score: 102 bits (255), Expect = 3.060e-20 Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 23 YRRIAHLKGHSSRVLHLDWTVDGRFVHTCGQDNHILHWEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGEFRPRMFKRAFLVRDEEWATWSSTIGWPVQGVFPAYSDNSDVNAVDVCPDRDLLAAADDAKTIRLLRYPVLRGGATSRNYTAHSSHVMGARFTVGVEPTRLITVGGMDSTVLQW 601 ++ + LKGH S V H D+++DG ++ + +IL +++ G+ P A +RDE+W+TW+ T+GW VQG+FP +D SD+NA D P++ +LA ADD ++L RYP A Y HSSHV RF V P IT GG D ++ QW Sbjct: 725 FKPLKKLKGHPSTVSHFDFSLDGNYIMSNCTSYNILFFDVRA------------------------------------GKHNP---SGASSLRDEKWSTWTCTLGWSVQGIFPPCADGSDINACDRSPEQTVLATADDFGLVKLFRYPNPVERAACNQYNGHSSHVTNVRF-VKNSPY-CITTGGEDKSIFQW 876 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5771.14184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5771.14184.1 >prot_L-elsbetiae_contig5771.14184.1 ID=prot_L-elsbetiae_contig5771.14184.1|Name=mRNA_L-elsbetiae_contig5771.14184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=287bp ARGAKKGLPADSAPKGAQLQGAPPGLDRGRPLRPHLRAGQPHPALGDPAAback to top mRNA from alignment at L-elsbetiae_contig5771:2002..4322+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5771.14184.1 ID=mRNA_L-elsbetiae_contig5771.14184.1|Name=mRNA_L-elsbetiae_contig5771.14184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2321bp|location=Sequence derived from alignment at L-elsbetiae_contig5771:2002..4322+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5771:2002..4322+ >mRNA_L-elsbetiae_contig5771.14184.1 ID=mRNA_L-elsbetiae_contig5771.14184.1|Name=mRNA_L-elsbetiae_contig5771.14184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1722bp|location=Sequence derived from alignment at L-elsbetiae_contig5771:2002..4322+ (Laminarionema elsbetiae ELsaHSoW15)back to top |