mRNA_L-elsbetiae_contig5761.14172.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5761.14172.1
Unique NamemRNA_L-elsbetiae_contig5761.14172.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A6H5KEN7_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN7_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.470e-119
Identity = 177/232 (76.29%), Postives = 201/232 (86.64%), Query Frame = 1
Query:  202 MSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFGPRLKDLILPGSHHLHLDDDTAPLVASHTAAFLAGRD 897
            MSK +WY  LDYPEYVIEAARSLGW++FS+VGHSMGGAVAS+VAASFPE VERCVFLDILGPFA   GTSPK LR S+ASRRAL+ KEPK Y SFDEAV+TRL+AVTMWGE QTMSW+ AVRLV G T+P EG  QV+FTNDVRLR+SS S+ TE+SVL YL+ +ES+CL+IRGETGMLANA  +  FV RKEA G RL+DL+LPGSHHLHLDD+TAPLVASHTAAFL GR+
Sbjct:    1 MSKDAWYPVLDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRSSSPSHLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGRE 232          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: D8LB99_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB99_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 2.050e-105
Identity = 161/211 (76.30%), Postives = 177/211 (83.89%), Query Frame = 1
Query:    1 GRSSLMCRPPFPSLPQAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVR 633
            G+S + C        + WG  SS RKALALHGYLDNSGSFDLLGPALAKEGFE VA+DFPGHGRSDHMSK +WY  LDYPEYVIEAARSLGW++FS+VGHSMGGAVAS+VAASFPE VERCVFLDILGPFA   GTSPK LR S+ASRRAL+ KEPK Y SFDEAV+TRL+AVTMWGE QTMSW+ AVRLV G T+P EG  QV+FTNDVR
Sbjct:   14 GKSFVTCSNGSNIFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVR 224          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A835Z7B1_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B1_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.720e-64
Identity = 128/311 (41.16%), Postives = 176/311 (56.59%), Query Frame = 1
Query:   46 QAWG----SRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPK-------------------PYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGD------GQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFGPRLKDLI-LPGSHHLHLDDDTAPLVASHTAAFLA 888
            + WG     + SR++ LALHGYLDN+ +FDLLGPALA EG+E VA+D PGHG S H S  +WY  +DYP  +     +LGWD    +GHS+G  +AS+VA + P++V  CVF+D LGPF + P  +   LR ++ SR ALL K+ K                    + S + AV+ R+ A   +  SQT+S +AA  L++    P   +      G V+F  D+RLRA SS+Y +ED+V  +L  +   CLL+ G+TG   +      F  R +  GPRL D   LPGSHHLHLD ++   V   T  FLA
Sbjct:   33 KVWGHAAQGQDSRKRILALHGYLDNANTFDLLGPALAGEGYEVVAIDLPGHGLSSHTSSDNWYDIMDYPHSIAAVQDALGWDSCHYLGHSLGAGIASLVAGALPDRVTGCVFIDALGPFTLAPHGAHMHLRRAMQSRAALLNKQQKVXXXXXXXXXXXXXXXXXXXWPSLELAVQARVAAAADYPGSQTISKEAAAILMQRSIEPVSPEHNNGKAGGVRFRYDLRLRAYSSTYLSEDTVSAFLSNIACPCLLVTGQTGFPLSGG----FRARMQTLGPRLADHAHLPGSHHLHLDPESWQGVRDVTLKFLA 339          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A7S4RJ08_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RJ08_9DINO)

HSP 1 Score: 193 bits (490), Expect = 8.960e-52
Identity = 127/308 (41.23%), Postives = 176/308 (57.14%), Query Frame = 1
Query:   46 QAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWD-RFSLVGHSMGGAVASIVAAS-FPEK--VERCVFLDILGPFAVDPGTSPKRLRTSIASR----RALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRG--ETGMLANAAAIPAFVQRKEAFGPRLKDLILPGSHHLHLDDDTAPLVASHTAAFL---AGRDH---QELVREG 921
            +AWG R   R  LALHG+LDN+ +F LLGP LA+ GF  VA+D+PGHGRS H S+ + Y   D P Y  +AAR+LGW+  ++LVGHS+G + A+I+AAS +P    +     +D+LGP +     +   L  ++ +R      LL +  + YASFDE V+ RLRAV      Q ++ +AA  LV          G   F +D R++A S SY+TED VL  LR + +  LL+    E G      A    V+R    G  L+  +LPG HHLHLD DTAP V++  +AFL   AG+     +E +REG
Sbjct:  112 RAWGERG--RPVLALHGWLDNANTFSLLGPHLARRGFLAVAVDWPGHGRSAHRSRDTSYGLSDLPWYAHQAARALGWEGAYALVGHSLGASAATILAASAYPSSGTLAALCCIDVLGPLSKTSSNTAVHLELALRARDKHLERLLRRSRRVYASFDECVQARLRAVRALPGDQLLTPEAAASLVERAVEEMHR-GAWTFRHDPRVQAPSPSYYTEDQVLALLRAIRTPTLLVEADPEGGHAWPRPAEQWEVRRGAVAG--LRRAVLPGGHHLHLDPDTAPAVSTAVSAFLEEVAGQCEAWREECLREG 414          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: UPI00145EDDEF (alpha/beta hydrolase n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145EDDEF)

HSP 1 Score: 177 bits (448), Expect = 2.500e-47
Identity = 109/269 (40.52%), Postives = 147/269 (54.65%), Query Frame = 1
Query:   46 QAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFGPRLKDL---ILPGSHHLHLDD 843
            +AWG  +     LALHG+LDN+ SFD L P L       VA+D  GHGRS+H      Y  +D+   V+ AA +LGWDRF+L+GHS+GG +AS VAA+ PE+++R   ++ LGP   DP   P  LR +I    AL  K P  YA+ + A++ R        E+  +SW AA  LV  G R    DG   +  D RLR  S  Y +E  +L Y+  + +  LLI G  G L   A    ++Q + A   R+ DL   ILPG HH HL+D
Sbjct:   17 RAWGPPNGV-PVLALHGWLDNAASFDALAPLLPNT--RLVALDLTGHGRSEHRPPGIHYHFVDFIPDVVAAADALGWDRFALLGHSLGGGIASFVAATLPERIDRVAMIEGLGPPTSDPADGPANLRKTIQQMDALPHKRPPVYANLEAAIQARC-------EASGLSWVAATILVERGVRLV--DGGFGWRTDPRLRFVSPLYLSEPQILAYMERIVAPALLICGADGYLVKRA----YMQERYA---RIADLTVKILPGGHHPHLED 266          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A3S0WEZ8_9GAMM (Alpha/beta hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0WEZ8_9GAMM)

HSP 1 Score: 172 bits (437), Expect = 9.620e-46
Identity = 108/273 (39.56%), Postives = 146/273 (53.48%), Query Frame = 1
Query:   46 QAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIP-AFVQRKEAFGPRLKDL---ILPGSHHLHLDDDTA 852
            +AWG        LALHG+LDN+ SFD L   L   G   VA+D PGHG SDH      Y  +D+   ++ AA +LGWDRF+L+GHSMGG +AS +AA  PE++ R   ++ LGP   DP   P  LR +I     L GK    Y   + A++ R        E+  +SW AA  LV  G +P  G     +  D RLR  S  Y +E  +L Y+ ++ +  LL+ G+ G L     IP A++Q + A   R+ DL   ILPG HH HL+D  A
Sbjct:   18 RAWGPPDGV-PVLALHGWLDNAASFDPLASLLP--GVRLVAVDLPGHGGSDHRPPGVHYHFVDFIPDMVAAADALGWDRFALLGHSMGGGIASFIAAILPERITRLAMIEGLGPPTSDPADGPANLRKAIDQMNGLAGKRLPIYPDVEGAIQARC-------EASGLSWRAAATLVERGLQPVSGG--FGWRTDPRLRFVSPLYLSEPQILAYMEQIRAPALLLCGDAGYL-----IPRAYMQERYA---RIADLTVKILPGGHHPHLEDPEA 270          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A2A4SQQ0_9DELT (Alpha/beta hydrolase n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4SQQ0_9DELT)

HSP 1 Score: 172 bits (437), Expect = 1.020e-45
Identity = 98/265 (36.98%), Postives = 155/265 (58.49%), Query Frame = 1
Query:   52 WGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFG--PRLKDLILPGSHHLHLD 840
            WG+ +     LA+HG+LDN+G+FD + P L       VA+D PGHG S+H    + Y  +DY E V+ AA +LGW  F+L+GHS+GGAVAS++A + PE++   VF+D LGP++ DP  +P  L+ ++  R+    ++   Y + ++ V  R +     G+ +T S +A   ++R G R  EG   + +T+D RL  SS  Y ++D    +L  + + CL+I GE G+L +   +      +  FG  P+++   LPG+HHLHLD
Sbjct:   20 WGNPAGM-PVLAIHGWLDNAGTFDHIAPLLPD--LNLVAIDLPGHGLSEHRPMGTNYHFIDYIEDVVAAADALGWQEFALIGHSLGGAVASLIAGTIPERILSAVFIDSLGPWSQDPCQAPHFLQRALRQRKNQSQRKSPTYPNLEQMVAMREQV----GKIETKSVEA---ILRRGVRATEGG--LTWTSDPRLTLSSPLYMSDDHARAFLENISAPCLVIEGEQGILLDNPRM------RSRFGIIPQMQHQRLPGNHHLHLD 266          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A3S0W074_9GAMM (Alpha/beta hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0W074_9GAMM)

HSP 1 Score: 171 bits (433), Expect = 3.680e-45
Identity = 102/266 (38.35%), Postives = 145/266 (54.51%), Query Frame = 1
Query:   46 QAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFGPRLKDLILPGSHHLHLDD 843
            +AWG        LA+HG+LDN+ SFD L P L +     VA+D PGHG S H    + Y  +D+   V+ AA +LGW RF+L+GHSMGG +AS +AA+ PE+V     ++ LGP   +P   P  L  ++A   AL  K    YAS + A++ R        E+  +SW AA  LV  G +  EG    ++ +D RLR  S  Y +E  +L Y+  + +  LL+ G+ G L + A    ++Q + A   RL   ILPG HH HL+D
Sbjct:   18 RAWGPADGL-PVLAVHGWLDNAASFDALAPLLPE--LRLVALDLPGHGHSAHRPPGTHYHFVDFVPDVVAAADALGWSRFALLGHSMGGGIASFLAAALPERVTHLALIEGLGPPTSNPADGPDHLVKAMAQMNALTHKRLPLYASIEAAIQARC-------EAGGLSWQAAAILVERGLQAVEGG--FRWRSDPRLRFVSPLYLSEPQILAYMERITAPALLLCGDAGYLISRA----YMQERYARIARLCIHILPGGHHPHLED 267          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A7U7G8P2_9GAMM (Putative hydrolase n=1 Tax=Candidatus Contendobacter odensis Run_B_J11 TaxID=1400861 RepID=A0A7U7G8P2_9GAMM)

HSP 1 Score: 168 bits (426), Expect = 4.310e-44
Identity = 109/285 (38.25%), Postives = 145/285 (50.88%), Query Frame = 1
Query:   46 QAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRP-WEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFGPRLKDLILPGSHHLHLDDDT------APLVASHTAA 879
            +AWG        LALHG+LDN+ SFD L P L       VA+D PGHG+S+       Y  +D+   V+ AA  LGW+ F+L+GHS+GG +AS VAA  PE+V R   ++ LGP    P   P  LR +I     L  K P  Y S D A++ R        E+  +SW AA  LV  G +P  EG G   +  D RLR +S  Y  E  +L Y+  + +  LLI G  G L   A    ++Q + A    L   ILPG HH HL+D        AP  A+ +A+
Sbjct:   17 RAWGPPKGI-PVLALHGWLDNAASFDALAPLLPD--IRLVALDLPGHGQSEQRPPGMHYHFVDFIPDVVAAADVLGWEYFALLGHSLGGGIASFVAAILPERVTRVAMIEGLGPPTSHPADGPIHLRKTIEQMNGLPDKRPPVYPSMDAAIQARC-------EASDLSWRAAATLVSRGVQPIGEGYG---WRTDPRLRFASPLYLNEPQILAYMERIAAPALLICGADGYLVKRA----YMQERYARIANLSVNILPGGHHPHLEDPEPCARLLAPFFAAESAS 284          
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Match: A0A3C1SSI6_9GAMM (Alpha/beta hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SSI6_9GAMM)

HSP 1 Score: 168 bits (425), Expect = 5.370e-44
Identity = 106/266 (39.85%), Postives = 139/266 (52.26%), Query Frame = 1
Query:   46 QAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFVAMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGAVASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKEPKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVKFTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAFVQRKEAFGPRLKDLILPGSHHLHLDD 843
            +AWG        LALHG+LDN+ SFD L P L       VA+D  GHG S+H      Y  +D+   VI AA +LGW RF+L+GHS+GG +AS VAA  PE+V R   ++ LGP   +P   P  LR +I    AL  K P  Y S + A++TR        E+  +SW AA  LV  G +P  GD    +  D RLR  S  Y TE  +L Y+  +E   LLI G  G L   A    +++ + A    L   +L G HH HL+D
Sbjct:   17 RAWGPPDGI-PVLALHGWLDNAASFDALAPLLPDA--RLVALDLTGHGHSEHRPPGIHYHFVDFIPDVIAAADALGWRRFALLGHSLGGGIASFVAALLPERVARVAMIEGLGPPTSNPDDGPANLRKTIDQMDALPRKRPPLYPSLEAAIQTRC-------EAGGLSWTAASILVERGIQPL-GDAGYGWRTDPRLRFVSPLYLTEPQILAYMERIEIPALLICGAEGYLVKRA----YMRERYARIADLSVRVLAGGHHPHLED 267          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5761.14172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEN7_9PHAE1.470e-11976.29AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
D8LB99_ECTSI2.050e-10576.30AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A835Z7B1_9STRA2.720e-6441.16Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7S4RJ08_9DINO8.960e-5241.23Hypothetical protein n=3 Tax=Alexandrium monilatum... [more]
UPI00145EDDEF2.500e-4740.52alpha/beta hydrolase n=1 Tax=Candidatus Competibac... [more]
A0A3S0WEZ8_9GAMM9.620e-4639.56Alpha/beta hydrolase n=1 Tax=Candidatus Competibac... [more]
A0A2A4SQQ0_9DELT1.020e-4536.98Alpha/beta hydrolase n=1 Tax=SAR324 cluster bacter... [more]
A0A3S0W074_9GAMM3.680e-4538.35Alpha/beta hydrolase n=1 Tax=Candidatus Competibac... [more]
A0A7U7G8P2_9GAMM4.310e-4438.25Putative hydrolase n=1 Tax=Candidatus Contendobact... [more]
A0A3C1SSI6_9GAMM5.370e-4439.85Alpha/beta hydrolase n=1 Tax=Candidatus Competibac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5761contigL-elsbetiae_contig5761:6032..11301 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.9
Seed ortholog evalue2.1e-86
Seed eggNOG ortholog2880.D8LB99
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of endocannabinoid signaling pathway
EggNOG OGsCOG0596@1,KOG1454@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-27_004680.1
Exons7
Model size1818
Cds size939
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816617.467866-UTR-L-elsbetiae_contig5761:6031..68951622816617.467866-UTR-L-elsbetiae_contig5761:6031..6895Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5761 6032..6895 -
1691683687.954896-UTR-L-elsbetiae_contig5761:6031..68951691683687.954896-UTR-L-elsbetiae_contig5761:6031..6895Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5761 6032..6895 -
1622816617.5736468-UTR-L-elsbetiae_contig5761:11286..113011622816617.5736468-UTR-L-elsbetiae_contig5761:11286..11301Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5761 11287..11301 -
1691683688.041446-UTR-L-elsbetiae_contig5761:11286..113011691683688.041446-UTR-L-elsbetiae_contig5761:11286..11301Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5761 11287..11301 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816617.483144-CDS-L-elsbetiae_contig5761:6895..70151622816617.483144-CDS-L-elsbetiae_contig5761:6895..7015Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 6896..7015 -
1691683687.9660192-CDS-L-elsbetiae_contig5761:6895..70151691683687.9660192-CDS-L-elsbetiae_contig5761:6895..7015Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 6896..7015 -
1622816617.4982858-CDS-L-elsbetiae_contig5761:7565..77671622816617.4982858-CDS-L-elsbetiae_contig5761:7565..7767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 7566..7767 -
1691683687.9754784-CDS-L-elsbetiae_contig5761:7565..77671691683687.9754784-CDS-L-elsbetiae_contig5761:7565..7767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 7566..7767 -
1622816617.508332-CDS-L-elsbetiae_contig5761:8149..82491622816617.508332-CDS-L-elsbetiae_contig5761:8149..8249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 8150..8249 -
1691683687.985427-CDS-L-elsbetiae_contig5761:8149..82491691683687.985427-CDS-L-elsbetiae_contig5761:8149..8249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 8150..8249 -
1622816617.5176306-CDS-L-elsbetiae_contig5761:8820..89071622816617.5176306-CDS-L-elsbetiae_contig5761:8820..8907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 8821..8907 -
1691683687.9960787-CDS-L-elsbetiae_contig5761:8820..89071691683687.9960787-CDS-L-elsbetiae_contig5761:8820..8907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 8821..8907 -
1622816617.5313163-CDS-L-elsbetiae_contig5761:9453..96351622816617.5313163-CDS-L-elsbetiae_contig5761:9453..9635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 9454..9635 -
1691683688.0065913-CDS-L-elsbetiae_contig5761:9453..96351691683688.0065913-CDS-L-elsbetiae_contig5761:9453..9635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 9454..9635 -
1622816617.5459054-CDS-L-elsbetiae_contig5761:10431..105471622816617.5459054-CDS-L-elsbetiae_contig5761:10431..10547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 10432..10547 -
1691683688.0232742-CDS-L-elsbetiae_contig5761:10431..105471691683688.0232742-CDS-L-elsbetiae_contig5761:10431..10547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 10432..10547 -
1622816617.5630794-CDS-L-elsbetiae_contig5761:11154..112861622816617.5630794-CDS-L-elsbetiae_contig5761:11154..11286Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 11155..11286 -
1691683688.0325572-CDS-L-elsbetiae_contig5761:11154..112861691683688.0325572-CDS-L-elsbetiae_contig5761:11154..11286Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5761 11155..11286 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5761.14172.1prot_L-elsbetiae_contig5761.14172.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5761 6896..11286 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5761.14172.1

>prot_L-elsbetiae_contig5761.14172.1 ID=prot_L-elsbetiae_contig5761.14172.1|Name=mRNA_L-elsbetiae_contig5761.14172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
MCRPPFPSLPQAWGSRSSRRKALALHGYLDNSGSFDLLGPALAKEGFEFV
AMDFPGHGRSDHMSKYSWYSALDYPEYVIEAARSLGWDRFSLVGHSMGGA
VASIVAASFPEKVERCVFLDILGPFAVDPGTSPKRLRTSIASRRALLGKE
PKPYASFDEAVKTRLRAVTMWGESQTMSWDAAVRLVRGGTRPWEGDGQVK
FTNDVRLRASSSSYFTEDSVLTYLREVESDCLLIRGETGMLANAAAIPAF
VQRKEAFGPRLKDLILPGSHHLHLDDDTAPLVASHTAAFLAGRDHQELVR
EGEERPFMSSNL*
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mRNA from alignment at L-elsbetiae_contig5761:6032..11301-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5761.14172.1 ID=mRNA_L-elsbetiae_contig5761.14172.1|Name=mRNA_L-elsbetiae_contig5761.14172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5270bp|location=Sequence derived from alignment at L-elsbetiae_contig5761:6032..11301- (Laminarionema elsbetiae ELsaHSoW15)
GGACGAAGTTCCTTGATGTGCCGCCCACCCTTTCCCTCCCTTCCTCAGGC TTGGGGATCGCGGTCGTCTCGCCGAAAAGCACTCGCACTACATGGATACC TCGACAACAGCGGATCTTTCGATCTCCTTGGTCCGGCCCTCGCCAAGGTA AACGTCGACGAAATGCGACGTCAGCCCGTGACTCCTCTCTCTATGTATGT ACATGGATAACTTCCGTGTTGCCGCATCGCATTCCGCTGGAAGCTCGGAC ACGTGTTCACGGGTAATGCTTTTTTTTCTTTCTCTTTCTACCTTTTGCGC CGTTAGAAAAATATCGACTTGGCTACATACGCCGTCGCTGAATATTGCGC AACTGCCGTCGTTCAACGCCTGTTTGAGCGATTGTGCCCCTCCGCACTCC GCACCCTTCCTCCGCACTCCTTAGTCTTTCGGAGCACGTTTACCCCATTA TCTCGGATGGGGGGGAGGGGGGCGAGGCATGATATGAGCACCACGGCATG CAAAACCGTACAGTAGTAGCTTGTTCACCCGGTCTCTGTTTCTCGCTGGT CGAATCAGCACCCAACATGGAGAGCAATAAAGAGAAACACACAACCCTAC CGTCGGTGTGCTTGCTCCCTCCAACTTGCCACACCCAAGCTTTATAGTAT CGATCCTGCAAGTTGCATCAGCGGTGCCTTGTGCTGGTCTGGAATGGCTG AATCGACGAATGAGCACGAGTTGCGTTCTGACTGACCCAATGTCGAAATA GCAGGAGGGCTTCGAGTTTGTGGCGATGGATTTCCCAGGCCACGGTAGGT CGGATCACATGAGCAAATACTCGTGGTACTCGGCCCTAGACTATCCGGAG TATGTCATCGAGGCGGCCAGGTAAGCCAGCGGACCAACATTCAAAACACC GCTGCTATTAACATTGCATGCAGTAGAAGTGCTGCCATGATCACGTTTTT ATTAGAATTTCATTTAAATCCAACTGGTATTGTTCTCCGCGGCGCGCACG TATTGATGATTGGTAGGCTCTATAGAGGGGGGGCAATCAGGAGGTAAGTA GAGCTGCCTGAGCCATTCGCAGCTTTGGGTAGTTCGTGTCTTTCCCCTCG CTCTCCCTCTCTCGCGGCAGTGCGTAGAAATACACACAACGAGAGGAGCA AAATAATCGCATAATTTGAGAATGTGACCTTTTCAGGGACGAAAAGGGGT ACATGGGTACCCTTGCTCGAGGAGGACACGAAAGGGGTGCATGGGTACCC TTGCTCGAGGAGGACACGAAAATCAATTTCGGAACTCTATGATCGACAAC AGTAGTTAGATGGAGATAAATCGATGGCGGCCGCAACAAGATAACTTTTG TCGTAGGAAGGCAACACGTTGTCCTATTTAGGGAACAGCGGGTTGAGGAA AAGTGAGAAATTCTTGCCTACAGCAATTGTTGAGGCCATCAAATAGAGCC ACCCGCTGTGTCCGTCAGGGGTAAAACCGGTGCCCCGTCTGTAGGGGTCC CGTGTGTCCGTTTCAATGATTTTAACACTCATGGAGCCTATCAACAAAAA TGGGAGATGACCCCCCCACCCCCTCGACACGCGTGACCTGTCCATTGCAT CTGCCGCTGCCGAGCAAAATAAGACCAAAAGCTTCCCCTCATCGTGTGTT GCTTCTCCAAGCAAAGATCCCTGGGCTGGGACAGGTTTTCTCTGGTGGGG CATTCTATGGGAGGCGCGGTGGCGTCTATAGTGGCCGCGAGCTTTCCGGA GAAGGTGGAGCGGTGCGTCTTCCTCGACATCCTCGGCCCTTTCGCCGTCG ACCCCGGGACCTCCCCCAAGCGCTTGCGCACGAGCATTGCTTCGCGGAGT GAGTGTTTGTGTGTTGTATGTTCACGGCAGCGAGGAGCTTGTTCAGTCAG CACATACATGTGTATGTATGTAAGTACATCTGGCGCTTAGAAACGGGGTT TTGACCGGTCTTTCTTTCAACACTACCCTACCTTTGTCCAGACGTCCCCC GTGCATGAGGCGCCATGTAGTTTTAGCTCGAGAGTGTAGGCGGGAATCCG TCCTTCCCCCCACCTTTTCGTTGGGTTTGACCTTTAGAGGGAGTCGGGAC TCGTTGTTTTGGTGTGACGGGCCTTGACGGGTTAACGGCGTACGCTCGAG TGGTCGGTAAACGGGGATGATGCTATGTTATGAGTGACCCAGTTTTGGCG CCACCCGTGCACCTTGCGAACGGTTCCCCGTTTCGCGGGCTGTGTCCCCC ACACGTATGCGCGTTTTTCTGTGTTTTGGTTGTTTCAGGGACGTTGACCG CCCCGCCCCGCCGTGTGTTGTGTTTCGCTCTGCTGGTATTGTTGTTTGCA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCCCTCACCAAAGGGGCGC TCCTCGGCAAGGAGCCGAAGCCGTACGCTTCGTTCGATGAGGCCGTCAAA ACAAGACTTCGAGCCGTCACCATGTGGGGAGGTATGCATGTAGTTCGATG CTTGCGAATGAAGGTTTATTGGGCCTTCATCTACCGATGCAATGCGTTGT TTTGTCATGTAAAAAGTATCTGCGGGTTAATGAATTATTTGGCATGGCTT CGCGTCGGCTCTGCCGTTGTCTGTCTCACACATCCCGCTGTACTCCATAT ACGGATGAAAATAGCCGGATTCGTCTAGGGGAGCAGGAGGGAAAGTCTCG AGATATTTTCCGCACTCCGACGAGTTTTCGATCTGGTATCCAGCCGTGCT TTTGAAGAATGCTCTAGGACGATCCTCTGTTGTACATAAATGTCCTTGAA AACGCCCCCGTCGCGATGCTCGTCAAGAGCGGATGCTTCCAATTCTTCAG GCGTGTGGCCGTAAAAATCATCCCGCGCGAACCCTTCCGCCTTTTCTTTC AACCACGCGAAAATAAAAAAGCGAAAAAAGCGGACCGCCTGCGCCCGATT GTCCCGTTTAAACAGTGGATCGACGTGCCGTCTACGTTGTGTTGAGATGT TTTGCTGAAGCGCCCCGTTGGCCTGATTGTTGTCCGCTTTCTTCCTCCGC AGAGAGCCAGACAATGAGCTGGGATGCCGCGGTGCGCTTGGTCAGGGGAG GGACGAGGCCGTGGGAGGGAGACGGCCAAGTAAAGTTTACAAACGACGTC AGGTGTGCTCTGTGGGTGTGCGTTTGCACTTGGCTTTCCACGGCGCCCCC GGTCGATGGCCCGCGCCCGTCGTGTTGTTGAACGCAACCGGTCCAATTTC GTGTGCCTTTTTTGCCGGCTAGATGGTGCTTTTGCGAACCGAACCCCCAT TGCTGCAGCCGGTTACCAATGCTGGTTTCTTCATGCAGATTGATCACGGA GCCTTGTTGGTATCATATTTCCGAAGTTGCACGTACGCACGCGTTTCCAG CCAGAGAAACTAGCTTAGAGGAAGACATGAACGTGCTCCGCATTTTTTTC TACTGATACGTAGAATGAAGAAATAGAGAGCCACCTGAGTGCCGCACAAA GAAGCACGAGCGGAAATCGTCCAAATCTTTGCAGGTTACGAGCCTCGTCA TCCAGCTACTTCACAGAGGACTCGGTGCTGACCTACCTCCGGGAGGTCGA GAGCGACTGCCTGCTCATCAGGGGCGAGACAGGAATGCTGGCCAATGCGG CCGCTATCCCGGCGTTTGTACAGAGAAAGGAGGCATTCGGCCCGCGGTTG AAGGATCTGATCCTTCCGGGAAGCCATCACCTGCATGTGAGGTGTCCTCT CTTGGGTCATGATACTTGTTTGAGAGATGGATTACCGGTGTCCGAAAGGT AGATCGCCGGTGCAGCTGCTGCCACTGTCGGGATACTCGAATTATTGACA TGCGAACGAACAGCCAATGCACGGGAGGGATCCTTCTTCCGGCTTTGTGC ACGGCTGAGTAACGCGTGCATCTATCTGTTTTCTCTAACCTTCAATATTT TGCTTTTTTCTTTGGGCGAAAGGCAAGATAACTTTAGCAAGGCGAACACA CGGTTGTCTCTCTCGGTTGTCTCTAAAAGAGCAACGCGTGAAACGAAAAA AGTGGCTGGGTCATGTTTTGCTCAGAACATGTTTGCCCTGGTTATGAGTT TAGTTTCAGACGGCAAAAGAGGTAACGTTTGCAGCCACACATTTCTAGCC CGCCCGCCTCGGCCAAAACAAAAATCGACTTCTGTTTTGCTCTGAGATAT GTTTTTCCGTGTTCTCACACGCGCACGTCACTTTCCCATGCCCTGGGCCC TCGATGCCATGGGCTTCCCCCGCGTTTTCTCTGCAGTTGGACGACGACAC TGCGCCGTTGGTGGCCTCTCATACCGCAGCGTTTCTGGCCGGTCGAGATC ACCAGGAGCTCGTCCGAGAAGGCGAAGAAAGACCTTTCATGTCTTCCAAC TTGTAACTACTGCTGTTTTGACGTATGTAGCGGCCAGCGGGATGAGGAAC AAGAGAGATAGGGAAGGGTGGACTGCTCGACTTCTTTCGATCTGTTTGCC CCCCCCCGCCCCCGTTGCCTGTAAACTGCGAGCTTAGTTACTGTTGCTTG GGTGAATAAGGGTAGGAACGGAGATGGTATATGATTTTGCGTGCCTTGGG TGTCGGAACAGTGAAAAAAGTTTGCCTGTGTTGCGTGAAGATGCGATTTG CTGATGTGACAGTCTCGTCGCCGAGACAGGTCTGCGACGGCAGCACGCCG TTGTGTGTTTGGTGTTTGGAGTGTGGGGGGTTACTTCGTGTTGTGCCTGA GCTATTTGCTCCAAGGGCAGAGGACAGGCAAAAGCCCCTAAGCACCTGCG CCCGGTGCTCTGGGTGGACCAGAGTGGCCCAAGTGATTGGTGCCTTGTTA GCCCGAATGTCAAGCGTTTTCATCTACACGATGCCAATTTCCCTGATTAG TGTCCCTCTCTGGGGAAGTTCGTTCTTTGGTATCGTGCACGGAGCACACT TTTTCGTTCGAAATCACAGTGTCAATGCTTCAGTGTTCACTTCTGCTCCA TTGGTTCATGCCGTCGCTCCACGAGATTATCAAAAGCGCGCTCCTGTGTG ATCAGGGGGGCTCTGAGCACGGCTGTCGCGTTGGGACTTGAAGGCGAATT CACGAATTCAGCACGCCATACGGCAACCGCACCGGAAAGATATACAATCC TGCTACCCAAGCATGACATCATGCACATCGGATGAAAAAGCTGCTTTCTA GCACCCGGCTAAGTGGGGAGCGAAAACAATTTCTCTCCTTTGAAACAATC TCCCTCCTTTGGTAGGGTTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5761:6032..11301-

>mRNA_L-elsbetiae_contig5761.14172.1 ID=mRNA_L-elsbetiae_contig5761.14172.1|Name=mRNA_L-elsbetiae_contig5761.14172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1878bp|location=Sequence derived from alignment at L-elsbetiae_contig5761:6032..11301- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGCCGCCCACCCTTTCCCTCCCTTCCTCAGGCTTGGGGATCGCGGTC
GTCTCGCCGAAAAGCACTCGCACTACATGGATACCTCGACAACAGCGGAT
CTTTCGATCTCCTTGGTCCGGCCCTCGCCAAGATGTGCCGCCCACCCTTT
CCCTCCCTTCCTCAGGCTTGGGGATCGCGGTCGTCTCGCCGAAAAGCACT
CGCACTACATGGATACCTCGACAACAGCGGATCTTTCGATCTCCTTGGTC
CGGCCCTCGCCAAGGAGGGCTTCGAGTTTGTGGCGATGGATTTCCCAGGC
CACGGTAGGTCGGATCACATGAGCAAATACTCGTGGTACTCGGCCCTAGA
CTATCCGGAGTATGTCATCGAGGCGGCCAGGAGGGCTTCGAGTTTGTGGC
GATGGATTTCCCAGGCCACGGTAGGTCGGATCACATGAGCAAATACTCGT
GGTACTCGGCCCTAGACTATCCGGAGTATGTCATCGAGGCGGCCAGATCC
CTGGGCTGGGACAGGTTTTCTCTGGTGGGGCATTCTATGGGAGGCGCGGT
GGCGTCTATAGTGGCCGCGAGCTTTCCGGAGAAGGTGGAGCGGTGCGTCT
TCCTCGACATCCTCGGCCCTTTCGCCGTCGACCCCGGGACCTCCCCCAAG
CGCTTGCGCACGAGCATTGCTTCGCGGAATCCCTGGGCTGGGACAGGTTT
TCTCTGGTGGGGCATTCTATGGGAGGCGCGGTGGCGTCTATAGTGGCCGC
GAGCTTTCCGGAGAAGGTGGAGCGGTGCGTCTTCCTCGACATCCTCGGCC
CTTTCGCCGTCGACCCCGGGACCTCCCCCAAGCGCTTGCGCACGAGCATT
GCTTCGCGGAGGGCGCTCCTCGGCAAGGAGCCGAAGCCGTACGCTTCGTT
CGATGAGGCCGTCAAAACAAGACTTCGAGCCGTCACCATGTGGGGAGGGG
CGCTCCTCGGCAAGGAGCCGAAGCCGTACGCTTCGTTCGATGAGGCCGTC
AAAACAAGACTTCGAGCCGTCACCATGTGGGGAGAGAGCCAGACAATGAG
CTGGGATGCCGCGGTGCGCTTGGTCAGGGGAGGGACGAGGCCGTGGGAGG
GAGACGGCCAAGTAAAGTTTACAAACGACGTCAGAGAGCCAGACAATGAG
CTGGGATGCCGCGGTGCGCTTGGTCAGGGGAGGGACGAGGCCGTGGGAGG
GAGACGGCCAAGTAAAGTTTACAAACGACGTCAGGTTACGAGCCTCGTCA
TCCAGCTACTTCACAGAGGACTCGGTGCTGACCTACCTCCGGGAGGTCGA
GAGCGACTGCCTGCTCATCAGGGGCGAGACAGGAATGCTGGCCAATGCGG
CCGCTATCCCGGCGTTTGTACAGAGAAAGGAGGCATTCGGCCCGCGGTTG
AAGGATCTGATCCTTCCGGGAAGCCATCACCTGCATGTTACGAGCCTCGT
CATCCAGCTACTTCACAGAGGACTCGGTGCTGACCTACCTCCGGGAGGTC
GAGAGCGACTGCCTGCTCATCAGGGGCGAGACAGGAATGCTGGCCAATGC
GGCCGCTATCCCGGCGTTTGTACAGAGAAAGGAGGCATTCGGCCCGCGGT
TGAAGGATCTGATCCTTCCGGGAAGCCATCACCTGCATTTGGACGACGAC
ACTGCGCCGTTGGTGGCCTCTCATACCGCAGCGTTTCTGGCCGGTCGAGA
TCACCAGGAGCTCGTCCGAGAAGGCGAAGAAAGACCTTTCATGTCTTCCA
ACTTGTAATTGGACGACGACACTGCGCCGTTGGTGGCCTCTCATACCGCA
GCGTTTCTGGCCGGTCGAGATCACCAGGAGCTCGTCCGAGAAGGCGAAGA
AAGACCTTTCATGTCTTCCAACTTGTAA
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