mRNA_L-elsbetiae_contig575.14150.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig575.14150.1
Unique NamemRNA_L-elsbetiae_contig575.14150.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig575.14150.1 vs. uniprot
Match: D7FSD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD2_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 1.960e-132
Identity = 249/387 (64.34%), Postives = 274/387 (70.80%), Query Frame = 1 
Query:   13 ELADCMAGDKRIGGEEQRLLAGLIENKHPGVMTAYTNYATNQDVSTLVSALMTIVRTQGGGAGDGGEGAPLSREKQDKQNGRERVVLLMHETRVLTASDATRVLLLLAREDLNTLAAFEAFDSSKDVSALVENIKSILQEAPPIAPADLTMAMHPDGDHSNSSPLLRQILQPLPETEDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXPNGNDDAVAENVVSIVDGMGLDENEAAALRLAIASGDANIRGALELFRLDPDADELKDTIARVARLVLEREREAEVTTQVPGASGVVG---------VAAATGTAEAVGARSIDFTLDGKEGLFQELLQQLGGVGVMSEAQAAVIMDRYRSKDAVVFAALDVYKNENDMSELVDTLKRLT 1146
            ELADCMAGDK IG +E  LLA LIENK+P V+ AY +YA +QDV  LVSALM IV TQGG    GG   P  R +             MH+T+VLTASDATR+LLLLA+ED N+LAAFEAFDSSKDVS+LVE IK+ILQ+APPIAPA LTM  HPDG  SNSS LL QILQPLP+  D                              +  D  VAENVVSIVDGMGLDE+EAAALRLAIA+GD N++GALELFRLD DA EL+DT ARVARLVLERE E+ +T QVP AS  +G         VA A    E    R+IDFTLDGK GLFQELLQQL  VGVMSEAQA VIMDRYRSKDAVVFAALDVYKNENDMSELVDTLKRLT
Sbjct:  560 ELADCMAGDKSIGAQEAALLAKLIENKYPPVIQAYEDYAASQDVGALVSALMAIVGTQGGEQEVGGMEEP--RAQXXXXXXXXXXXXXMHDTKVLTASDATRLLLLLAQEDPNSLAAFEAFDSSKDVSSLVEAIKTILQDAPPIAPAMLTMEAHPDGGRSNSSQLLTQILQPLPDANDDAATSEDSDGSARLDSGNNAANIEMGEDGGSDADAVVAENVVSIVDGMGLDESEAAALRLAIANGDVNMKGALELFRLDSDAQELEDTFARVARLVLEREHESRLTGQVPDASRAMGENSCDSNNDVATANSGEET---RNIDFTLDGKAGLFQELLQQLERVGVMSEAQAVVIMDRYRSKDAVVFAALDVYKNENDMSELVDTLKRLT 941
[Close]
BLAST of mRNA_L-elsbetiae_contig575.14150.1 vs. uniprot
Match: A0A7S2S085_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S085_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.130e-10
Identity = 80/338 (23.67%), Postives = 124/338 (36.69%), Query Frame = 1 
Query:   10 QELADCMAGDKRIGGEEQRLLAGLIENKHPGVMTAYTNYATNQDVSTLVSALMTIVRTQ-----------------GGGAGD------------------GGEGAPLSREKQD----------------------------KQNGRERVVLLMHETRVLTASDA-TRVLLLLAREDLNTLAAFEAFDSSKDVSALVENIKSILQEAPPIAPADL-TMAMHPDGDHSNSSPLLRQILQPLPETEDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXPNGNDDAVAENVVSIVDGMGLDENEAAALRLAIASGDANIRGALELFRLDPDADELKDTIARVAR 828
            +EL DC+  D+++   E   L  LI+   P V  AY  Y    DV  L+  LM +VR +                 G GAG                   GGE +     +QD                              + R+ ++++M E   L   +A T    LL  ED     AF+AF+ ++D   LV ++K++  + P   P  +  +AMH DG                   E                                     +  +   ++  MGL E EA ALRL++A  +  +R  LE+FR++ D D+LKD++ R+AR
Sbjct:  294 KELLDCLVADEKLNNLEHVTLCRLIDGGDPNVYAAYDVYTECDDVGDLIDTLMRVVRREIRRGTAGAGHARASGANGHGAGQIRYTASDAVAEANGARSWGGELSESGEYEQDLGDEEXXXXXXXXXXXXXXXLAGGDLSLSTDDRKEIIMMMLERGTLDHKEAVTLTRRLLVDEDEALHDAFDAFEVNRDGRDLVMSLKTLAGDDPEAVPLSMGELAMHVDGRELEEEXXXXXXXXXXXRREP------------------------------------IVNSFSEVIASMGLTEEEATALRLSLARENVFMRACLEVFRVERDEDDLKDSLKRIAR 595
[Close]
BLAST of mRNA_L-elsbetiae_contig575.14150.1 vs. uniprot
Match: A0A7S2S080_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S080_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.250e-10
Identity = 80/338 (23.67%), Postives = 124/338 (36.69%), Query Frame = 1 
Query:   10 QELADCMAGDKRIGGEEQRLLAGLIENKHPGVMTAYTNYATNQDVSTLVSALMTIVRTQ-----------------GGGAGD------------------GGEGAPLSREKQD----------------------------KQNGRERVVLLMHETRVLTASDA-TRVLLLLAREDLNTLAAFEAFDSSKDVSALVENIKSILQEAPPIAPADL-TMAMHPDGDHSNSSPLLRQILQPLPETEDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXPNGNDDAVAENVVSIVDGMGLDENEAAALRLAIASGDANIRGALELFRLDPDADELKDTIARVAR 828
            +EL DC+  D+++   E   L  LI+   P V  AY  Y    DV  L+  LM +VR +                 G GAG                   GGE +     +QD                              + R+ ++++M E   L   +A T    LL  ED     AF+AF+ ++D   LV ++K++  + P   P  +  +AMH DG                   E                                     +  +   ++  MGL E EA ALRL++A  +  +R  LE+FR++ D D+LKD++ R+AR
Sbjct:  731 KELLDCLVADEKLNNLEHVTLCRLIDGGDPNVYAAYDVYTECDDVGDLIDTLMRVVRREIRRGTAGAGHARASGANGHGAGQIRYTASDAVAEANGARSWGGELSESGEYEQDLGDEEXXXXXXXXXXXXXXXLAGGDLSLSTDDRKEIIMMMLERGTLDHKEAVTLTRRLLVDEDEALHDAFDAFEVNRDGRDLVMSLKTLAGDDPEAVPLSMGELAMHVDGRELEEEXXXXXXXXXXXRREP------------------------------------IVNSFSEVIASMGLTEEEATALRLSLARENVFMRACLEVFRVERDEDDLKDSLKRIAR 1032
[Close]
BLAST of mRNA_L-elsbetiae_contig575.14150.1 vs. uniprot
Match: A0A835ZLI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLI9_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.600e-10
Identity = 108/486 (22.22%), Postives = 177/486 (36.42%), Query Frame = 1 
Query:    1 MFRQELADCMAGDKRIGGEEQRLLAGLIENKHPGVMTAYTNYATNQDVSTLVSALMTIVRTQGGGAGD--------GGEGAPLSREKQDKQNG-----------------------------------RERVVLLMHETRVLTASDATRVLLLLAREDLNTLAAFEAFDSSKDVSALVENIKSILQEAPPIAPADLTMAMHPDGDHSNSSPLLRQILQPLPETEDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXPNGNDDAVAENVVSIVDGMGLDENEAAALRLAIA-------------------SGDANI----------------------RGALELFRLDPDADELKDTIARVARLVLEREREAEVTTQVPGASGVV---------------------GVAAATGTAEAVGARSIDFTLDGKEGLFQELLQQLGGVGVMSEAQAAVIMDRYRSKDAVVFAALDVYKNENDMSELVDTLKRL 1143
            M  Q+L   +    R+G  +   L+ LIE+  P VM AY  Y   +D   L  +L+ +     G  GD        GGE +P      +  +G                                   R  V+  M ET   TA+ A  +L  L        AAF+ +D+S D+  L++ +  + + A       ++ A   DG  ++ +           E  +G                              G D  ++  ++ +VDGMGLDE E+AALRL IA                   SG+A +                      R AL+++ L+ DAD+L+DT+ R+AR  +    + +                                 G  A +   +    R ID T      L ++LL  L    ++++ QA  ++ R+  +D V+   LD Y+ +N + +LVDTL+R+
Sbjct:  832 MELQDLIALLGQAGRLGNAQLIALSQLIEDADPRVMAAYDVYMEIEDADDLADSLVRLAGAVCGYDGDEQDQTDEDGGESSPTPAAPANGVSGXXXXXXXXXXXXXXTDPYGDGSAVTDXXXXXETAARAGVLRAMFETGAHTAAQAAVLLRQLRTGGARVHAAFDVYDASGDLEDLLDTLGHVARIAGAQNEGGMSTAAQ-DGSMTSGTG----------EDPEGQQLSTAGSGG-------------------GGADGELSRKLLRLVDGMGLDELESAALRLCIAKRDPMIWCVRRRSGAPLTTSGEATLSFMNRVSIAVCGGRHGVLVRVLRAALDVYGLEHDADDLRDTLQRIARATIADIAQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEEGEGAYSDEDDDEEERGIDMTPLDSGDLLRKLLDGLAEQQLLTQEQADALLRRWLDRDPVLLGVLDAYRQQNSLEDLVDTLRRM 1287
[Close]
BLAST of mRNA_L-elsbetiae_contig575.14150.1 vs. uniprot
Match: A0A7S2UW92_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW92_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.700e-6
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1 
Query:  655 VAENVVSIVDGMGLDENEAAALRLAIASGDANIRGALELFRLDPDADELKDTIARVA 825
            V +  +S+V  MGL +NEA ALRL +A G+  + GALE+FRLD D  ELKD++ R+A
Sbjct:   83 VFQEFLSLVRTMGLTDNEAEALRLCVAEGNKALAGALEVFRLDRDKGELKDSLKRLA 139
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig575.14150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FSD2_ECTSI1.960e-13264.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2S085_9STRA4.130e-1023.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2S080_9STRA5.250e-1023.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZLI9_9STRA5.600e-1022.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UW92_9STRA3.700e-652.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig575contigL-elsbetiae_contig575:32239..36407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1149
Cds size1149
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig575.14150.1prot_L-elsbetiae_contig575.14150.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig575 32239..36407 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816615.5560908-CDS-L-elsbetiae_contig575:32238..324061622816615.5560908-CDS-L-elsbetiae_contig575:32238..32406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 32239..32406 -
1691683686.6794846-CDS-L-elsbetiae_contig575:32238..324061691683686.6794846-CDS-L-elsbetiae_contig575:32238..32406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 32239..32406 -
1622816615.571757-CDS-L-elsbetiae_contig575:32890..330011622816615.571757-CDS-L-elsbetiae_contig575:32890..33001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 32891..33001 -
1691683686.6969383-CDS-L-elsbetiae_contig575:32890..330011691683686.6969383-CDS-L-elsbetiae_contig575:32890..33001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 32891..33001 -
1622816615.5819876-CDS-L-elsbetiae_contig575:33785..338791622816615.5819876-CDS-L-elsbetiae_contig575:33785..33879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 33786..33879 -
1691683686.713051-CDS-L-elsbetiae_contig575:33785..338791691683686.713051-CDS-L-elsbetiae_contig575:33785..33879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 33786..33879 -
1622816615.5942597-CDS-L-elsbetiae_contig575:34236..345811622816615.5942597-CDS-L-elsbetiae_contig575:34236..34581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 34237..34581 -
1691683686.7245033-CDS-L-elsbetiae_contig575:34236..345811691683686.7245033-CDS-L-elsbetiae_contig575:34236..34581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 34237..34581 -
1622816615.6047394-CDS-L-elsbetiae_contig575:35117..352061622816615.6047394-CDS-L-elsbetiae_contig575:35117..35206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 35118..35206 -
1691683686.7340183-CDS-L-elsbetiae_contig575:35117..352061691683686.7340183-CDS-L-elsbetiae_contig575:35117..35206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 35118..35206 -
1622816615.616398-CDS-L-elsbetiae_contig575:35481..356271622816615.616398-CDS-L-elsbetiae_contig575:35481..35627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 35482..35627 -
1691683686.74508-CDS-L-elsbetiae_contig575:35481..356271691683686.74508-CDS-L-elsbetiae_contig575:35481..35627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 35482..35627 -
1622816615.626628-CDS-L-elsbetiae_contig575:35705..357631622816615.626628-CDS-L-elsbetiae_contig575:35705..35763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 35706..35763 -
1691683686.754997-CDS-L-elsbetiae_contig575:35705..357631691683686.754997-CDS-L-elsbetiae_contig575:35705..35763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 35706..35763 -
1622816615.6367245-CDS-L-elsbetiae_contig575:36269..364071622816615.6367245-CDS-L-elsbetiae_contig575:36269..36407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 36270..36407 -
1691683686.764138-CDS-L-elsbetiae_contig575:36269..364071691683686.764138-CDS-L-elsbetiae_contig575:36269..36407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig575 36270..36407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig575.14150.1

>prot_L-elsbetiae_contig575.14150.1 ID=prot_L-elsbetiae_contig575.14150.1|Name=mRNA_L-elsbetiae_contig575.14150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=383bp
MFRQELADCMAGDKRIGGEEQRLLAGLIENKHPGVMTAYTNYATNQDVST
LVSALMTIVRTQGGGAGDGGEGAPLSREKQDKQNGRERVVLLMHETRVLT
ASDATRVLLLLAREDLNTLAAFEAFDSSKDVSALVENIKSILQEAPPIAP
ADLTMAMHPDGDHSNSSPLLRQILQPLPETEDGTGTDRDREGSGDGDDAG
AVGDGDGHGEGPNGNDDAVAENVVSIVDGMGLDENEAAALRLAIASGDAN
IRGALELFRLDPDADELKDTIARVARLVLEREREAEVTTQVPGASGVVGV
AAATGTAEAVGARSIDFTLDGKEGLFQELLQQLGGVGVMSEAQAAVIMDR
YRSKDAVVFAALDVYKNENDMSELVDTLKRLT*
back to top

mRNA from alignment at L-elsbetiae_contig575:32239..36407-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig575.14150.1 ID=mRNA_L-elsbetiae_contig575.14150.1|Name=mRNA_L-elsbetiae_contig575.14150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4169bp|location=Sequence derived from alignment at L-elsbetiae_contig575:32239..36407- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTTCGTCAGGAGCTGGCGGACTGCATGGCCGGAGACAAGCGCATTGG
CGGTGAAGAGCAACGCCTTCTCGCCGGGCTCATCGAGAACAAACACCCCG
GGGTCATGACCGCCTACACCAACTACGCCACTAACCAGGTGTGGTATCAA
ACCGTGTTGATACGATGTTGATTGTGTGACAAAGCACCCCCGGCGATGAG
TCCTCTACCCTCTGATACCTTCAAGTCTTCGAGATATGCATACCACCACG
GTGTAGTTGGTCTGGTGTTATTTTCCTTTACGAAAGAGAAACAGCTTGGA
ATGGGCGTGTTTGGCGACTCGAAACCTTATCCTATGTCAGGTGATGGTGA
GGGTGAATGAGTCCCAGTGCGTGGAAACAACACGATCGATTATAATGTGT
GCCAAACTTGCCGATTTTTTCTTCTTCTAGAAATATTCAACACCGTGCGT
GTGTGTAGTAACAGTCTCGGTTATAGCAGACTAACTTGAGACTAGAGATA
CGCTTCAGTTTTTCCGTTGCCGTGTCAAACGCGTGTTTATCACGTTCGAC
AAAAAATGGGAGAATGATAAAATTATCAAATGTAGCACTAACCGTGACCA
TCTTCTTCTCCCTCTCATTTATTCTTGGGTGTGGCATGCGACAGGACGTG
AGCACGTTAGTGAGCGCTCTCATGACCATCGTGAGAACTCAAGGTGGTGG
CGGTGATGCTGCCAGCGCGCCTTCTACTAAGGCGAGGCTTCAAATGAATG
ACCAAGATGAAGATGAAGAGGTGGCAGGAGCAGGAGATGGAGGCGAAGGC
GCCCCTCTCTCCCGCGAGAAACAAGACAAACAGAACGGGCGGGAGCGTGT
GGTGCTTCTGATGCACGAGACTAGGGTGCTCACTGCGTCCGACGCCACAC
GGGTATTGCTGCTACTTGCTCGTGAGGTACGTACGTGGTTGCTGATTTAT
TCAACACCAGCGTGTGCAATCTCGGAACACTTTTACTGTACAGTGGTCAC
ATACCTGCTTGAGCGTTGCGATGAAAAGTTGCAGCTATTGGAACGGTAGT
GTTGGGAATACTCATTCCCGCTGCTGCTGCTCGTGTTCGAACATAGAGGA
CATAACGCGATCATCGCTAACCTCATGATCGATCTGCGTCCGTTTACCTG
ACTTGCTGCTGCTGATGATGATGATGATGATCACACTTTTCACGAAAGCA
GGACCTCAACACTCTGGCGGCGTTCGAGGCGTTCGATTCATCCAAAGATG
TCTCCGCTCTGGTAGAGAACATCAAATCCATACTGCAGGAGTGAGTGGCC
CTTTGGAAGACAAGATTACACCAAGACACGATAGCTTCGCATCGGACTTG
CATGCTCTAGAGAAAAGTAGAGCACACGTTATCATAAGAAGCAAGATGCC
TGCCTGCCGATGACATCTTGGAGAGGGTTGGGCAGTGCGTGGTAACTCAC
AACTCACCCCACTTTCGGGCCCTACTTTTTGTGTCGCGTGCCGTCCTGGT
GATGGTAAGAGACAAATTAGTGTTCGCATCATGGTCGCCATTCCCTTCCA
CCGCACCCCTCCGGGGTCCAACATGGAGATTAGATTGCGTCAAACTCGCG
GCAATGTTGTGAGGGGGAACGCCCTACCGGGGCCTTATTATCTAGCAGAG
ATAGCCCACCCCGCCCTGCCGCCCAAGCAGGCGCATACCGTGCCCCTGCG
CTCCTCTTTGCCGTGTGTTGTCTCCTCTTGTTTGCTACTCGTCTGCGGCC
CCGACCCAACACACCCACCCTCACCCTCTCACCCTCTCACTCCACCTTAT
CTCCCCTTACGTAACGTTACCCCCAGGGCACCGCCGATCGCCCCTGCGGA
TCTGACTATGGCGATGCATCCCGATGGCGACCACTCCAACTCGTCGCCAC
TCCTCAGGCAGATATTGCAGCCCCTGCCTGAAACCGAAGACGGCACCGGA
ACGGACAGGGATAGAGAAGGTAGTGGTGATGGTGATGATGCCGGTGCTGT
TGGTGATGGTGATGGCCATGGTGAGGGTCCGAATGGCAATGATGACGCGG
TCGCTGAGAACGTTGTGAGCATCGTGGACGGCATGGGGCTCGACGAGAAC
GAGGCCGCCGCGCTACGGCTAGCCATCGCCAGCGGGGACGCGAACATCAG
AGGGGCTCTGGAGTTGTTCCGGTGAGTACATTGGTTTGTGACTTTGTACG
GCCTGCCGCTTTGTGATTTGCGGGCTGTTCAAGAAGTTCAGGATCAAGAG
AGTTGTTCCAAAATTCTTTGTTCGTCTGTGCTGCTGTAGTAAAGCGGCGA
CAAGACCGTTGAACTGGTGTAACTCGCTTCACCGAAACAGCATGCTTTGG
TCATTTGATATGCCGGTTAGGGTGATGGTCAGGAGTCGAGCAGACATAAG
AACCTGTTTTTCAGCCAACCTCGACATTCCTCTACCCGGCCGTGTGATGG
TGTATGTATGTATAAAGCTCGGTTGCATGGGTTCCGCATTTTTGTTATTT
TGTGTTGAATGATATTTTGAATGATCAGACTGGACCCAGACGCGGACGAG
CTCAAGGATACGATAGCCAGAGTGGCGAGGCTTGTGCTGGAGCGCGAGCG
GGAAGCTGAAGTGACTACACAGGTGAGAGAGACTACCTTGCCTTGCCTTG
TTTTGGCTTGCCGGGCGCATCGTGTGCTGCTCGGTAATTGTTGCAGATCC
GATTAGCAAGCCCGGTTCTCCTGCGGCGCTCAGGCTTGAAACAATAAAAT
GCCCAAGGTTGCCAGTTTTCTCTCGCTTGAGCGTACCGTGATGTGGCAAT
GTAGCAACGAAGCCACAAACGCACTCTCCATTCTGTACGATGTAAGTCGG
CCTTCCCGAACCAGTATCTAGTTGTTTTTGGAACTGGTGCCTTCTATGAA
ACACTGAAGTTGCTATATTTGGGAGGGCTACAAATGGTCAACACACCTAC
ATAAATAGATAGTTCGCGGTTGTTGACTGTATATTCGGCCACGCTGAAAG
GGTTTGACCTTGACCTTGCCAAGGTTTTGTGAGGTATCGTTTCCCTCGAA
CTGACAGTGTTACCTCCGGAAGGTTGACGAGTTTGGGTGTTTGTAGGGTT
CAAGACGTTGCAACCCTTCTCATACCATATCATGCTGTCAGAGAGTATGA
GAATAAGGAGCACGATTGCATGAAGATTGTTTGCCTCGATCGATCGCACG
CGAAAGGTGAACGTGAGTGTGACGGCCAAGGCCCTTTGCTTTCTGTACTT
TGAGCACAACAACAACGTATCTGGCTTGCTTGAAGGCGCAGGTCCGACCT
CAAACCCAACAGCAGTCGCGGAAGTGGTTGGGCTTCACACGGTCGCACCC
CAAACGGCGTATTTGACCGTAGAATTTACCACATTTTGATGGTACAAATG
TCACAGGTGCCTGGCGCTTCGGGGGTGGTGGGCGTCGCTGCTGCTACCGG
CACTGCTGAAGCTGTAGGAGCGAGGAGCATCGATTTCACGCTCGACGGCA
AAGAGGGGCTCTTTCAGGTGCCCCATCATACGGTCTTACGCGTTTTTGGC
GGTCAAAGTGGCTCTGTGCGTTCGGTGGTTTTTAGGTCTATTTTTGGTCT
CAATGGTAGTGCATGTGGTCCGACCCTCATGCTTAAGTACGCAATTATCT
TATGCAAAGCTTGTCTCGGTGCTGGGCTGCTGGGCTGTGTTGCATCATAC
ATATCCGTTTTCGACATTGTTTCTGCGCTTTTTTTGCAGAGGTAAATTGA
CATCAGTTGCAATATTTTTACTCGGAAGTGCCTGTACCCATGTCTCGGTA
GCGGGCTATTTAGGTGCATCTTAGCAGTGTTCAACATGTCCCTTGTACTG
AATTCCGCAATAAACAACCTCGTGGTGAAAGTGGTAGTAAAAAATGAGCC
CTTGTCGCTGCCCCCTCCTCCACACCACTTTCCCGCGTGCTTAAGGCGAG
TTGCATGTGCGTGAGCCAATCCCGCACCCACCCCAACGTGTATTCTTGCA
GGAGCTCCTCCAGCAACTGGGTGGCGTAGGTGTGATGAGCGAGGCGCAAG
CTGCCGTGATCATGGACAGATACAGGAGCAAGGACGCCGTGGTGTTTGCT
GCTCTTGACGTCTATAAGAACGAAAACGACATGTCCGAACTTGTGGACAC
GCTGAAGAGACTCACCTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig575:32239..36407-

>mRNA_L-elsbetiae_contig575.14150.1 ID=mRNA_L-elsbetiae_contig575.14150.1|Name=mRNA_L-elsbetiae_contig575.14150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2298bp|location=Sequence derived from alignment at L-elsbetiae_contig575:32239..36407- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTTCGTCAGGAGCTGGCGGACTGCATGGCCGGAGACAAGCGCATTGG
CGGTGAAGAGCAACGCCTTCTCGCCGGGCTCATCGAGAACAAACACCCCG
GGGTCATGACCGCCTACACCAACTACGCCACTAACCAGATGTTTCGTCAG
GAGCTGGCGGACTGCATGGCCGGAGACAAGCGCATTGGCGGTGAAGAGCA
ACGCCTTCTCGCCGGGCTCATCGAGAACAAACACCCCGGGGTCATGACCG
CCTACACCAACTACGCCACTAACCAGGACGTGAGCACGTTAGTGAGCGCT
CTCATGACCATCGTGAGAACTCAAGGTGGTGGCGGACGTGAGCACGTTAG
TGAGCGCTCTCATGACCATCGTGAGAACTCAAGGTGGTGGCGCAGGAGAT
GGAGGCGAAGGCGCCCCTCTCTCCCGCGAGAAACAAGACAAACAGAACGG
GCGGGAGCGTGTGGTGCTTCTGATGCACGAGACTAGGGTGCTCACTGCGT
CCGACGCCACACGGGTATTGCTGCTACTTGCTCGTGAGCAGGAGATGGAG
GCGAAGGCGCCCCTCTCTCCCGCGAGAAACAAGACAAACAGAACGGGCGG
GAGCGTGTGGTGCTTCTGATGCACGAGACTAGGGTGCTCACTGCGTCCGA
CGCCACACGGGTATTGCTGCTACTTGCTCGTGAGGACCTCAACACTCTGG
CGGCGTTCGAGGCGTTCGATTCATCCAAAGATGTCTCCGCTCTGGTAGAG
AACATCAAATCCATACTGCAGGAGACCTCAACACTCTGGCGGCGTTCGAG
GCGTTCGATTCATCCAAAGATGTCTCCGCTCTGGTAGAGAACATCAAATC
CATACTGCAGGAGGCACCGCCGATCGCCCCTGCGGATCTGACTATGGCGA
TGCATCCCGATGGCGACCACTCCAACTCGTCGCCACTCCTCAGGCAGATA
TTGCAGCCCCTGCCTGAAACCGAAGACGGCACCGGAACGGACAGGGATAG
AGAAGGTAGTGGTGATGGTGATGATGCCGGTGCTGTTGGTGATGGTGATG
GCCATGGTGAGGGTCCGAATGGCAATGATGACGCGGTCGCTGAGAACGTT
GTGAGCATCGTGGACGGCATGGGGCTCGACGAGAACGAGGCCGCCGCGCT
ACGGCTAGCCATCGCCAGCGGGGACGCGAACATCAGAGGGGCTCTGGAGT
TGTTCCGGGCACCGCCGATCGCCCCTGCGGATCTGACTATGGCGATGCAT
CCCGATGGCGACCACTCCAACTCGTCGCCACTCCTCAGGCAGATATTGCA
GCCCCTGCCTGAAACCGAAGACGGCACCGGAACGGACAGGGATAGAGAAG
GTAGTGGTGATGGTGATGATGCCGGTGCTGTTGGTGATGGTGATGGCCAT
GGTGAGGGTCCGAATGGCAATGATGACGCGGTCGCTGAGAACGTTGTGAG
CATCGTGGACGGCATGGGGCTCGACGAGAACGAGGCCGCCGCGCTACGGC
TAGCCATCGCCAGCGGGGACGCGAACATCAGAGGGGCTCTGGAGTTGTTC
CGACTGGACCCAGACGCGGACGAGCTCAAGGATACGATAGCCAGAGTGGC
GAGGCTTGTGCTGGAGCGCGAGCGGGAAGCTGAAGTGACTACACAGACTG
GACCCAGACGCGGACGAGCTCAAGGATACGATAGCCAGAGTGGCGAGGCT
TGTGCTGGAGCGCGAGCGGGAAGCTGAAGTGACTACACAGGTGCCTGGCG
CTTCGGGGGTGGTGGGCGTCGCTGCTGCTACCGGCACTGCTGAAGCTGTA
GGAGCGAGGAGCATCGATTTCACGCTCGACGGCAAAGAGGGGCTCTTTCA
GGTGCCTGGCGCTTCGGGGGTGGTGGGCGTCGCTGCTGCTACCGGCACTG
CTGAAGCTGTAGGAGCGAGGAGCATCGATTTCACGCTCGACGGCAAAGAG
GGGCTCTTTCAGGAGCTCCTCCAGCAACTGGGTGGCGTAGGTGTGATGAG
CGAGGCGCAAGCTGCCGTGATCATGGACAGATACAGGAGCAAGGACGCCG
TGGTGTTTGCTGCTCTTGACGTCTATAAGAACGAAAACGACATGTCCGAA
CTTGTGGACACGCTGAAGAGACTCACCTGAGAGCTCCTCCAGCAACTGGG
TGGCGTAGGTGTGATGAGCGAGGCGCAAGCTGCCGTGATCATGGACAGAT
ACAGGAGCAAGGACGCCGTGGTGTTTGCTGCTCTTGACGTCTATAAGAAC
GAAAACGACATGTCCGAACTTGTGGACACGCTGAAGAGACTCACCTGA
back to top