mRNA_L-elsbetiae_contig574.14138.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: D7FJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS1_ECTSI) HSP 1 Score: 498 bits (1283), Expect = 1.340e-173 Identity = 250/271 (92.25%), Postives = 258/271 (95.20%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 YGA + GGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVS+KFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYES+AEGKQMANLECNATAAAK+SHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLA SLSVEVR KGIDVL+VHPSPV SQFYSNLDHTIELMDKAKE+AV PN LPREI KSIGRVVWRD+GGMA+GVRVGTKMLSYNFL TAFSMV PYLPDYKKNDVGR Sbjct: 42 YGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 312
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A835YIP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP3_9STRA) HSP 1 Score: 323 bits (828), Expect = 1.540e-104 Identity = 158/271 (58.30%), Postives = 201/271 (74.17%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 YGA + GG SGIG+ALVE LALQG NVVIV++ L +T A +SA F Q+F KVG F+PGVDYM IK T + +QC+FNNAG+IVTGFY+S KQ AN+ECNA AAA+++HHF+GR+I + +GCVVFTSS AY P PF MYGATKAFL+N A SL+ EVR KG+DVL++HPSPV + FYS LDH I++MDKA AVA +TLP+ IFKS+GRVVWR++G A+ +R+ +L NFL + ++ AP+LPDYK +DV R Sbjct: 48 YGAEWALVTGGSSGIGRALVEALALQGFNVVIVALGGGLLDETHAALSAAFKDQKFVKVGVNFAPGVDYMTPIKEATDGLPIQCIFNNAGYIVTGFYDSTLGAKQAANMECNAVAAARITHHFLGRLIAARLRGCVVFTSSAVAYMPAPFCVMYGATKAFLTNFAGSLAAEVRCKGVDVLSIHPSPVATAFYSGLDHRIDMMDKAARGAVAASTLPKVIFKSVGRVVWREVGAPAVIMRLSASLLPGNFLYWSSAVAAPFLPDYKTHDVNR 318
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7R9WZI5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZI5_9STRA) HSP 1 Score: 317 bits (811), Expect = 8.900e-102 Identity = 153/286 (53.50%), Postives = 205/286 (71.68%), Query Frame = 2 Query: 365 QKLVALPFLVGILWSYGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 Q ++A + + Y A + GGGSGIGK+L +LA QGLNVVIVS+DD FL +T + K+P +FR VG F+P DYM I+ T D+++QC+FNNAGF+VTGF++ A K M N+ECNATAA +++HHFVG+++ +K +GCVVFTSSVA Y PTPFS+ YGATKAF+S LA L +E+++ GIDV AV+PSPV S FY+ LDH I+L++ A++ AV P+ LP E+FKSIG RD+GGMA+G R+GT ++YNF F+ APYLPDYK + R Sbjct: 50 QLIMAFRAVPDLKKKYDAEWALVTGGGSGIGKSLAFKLASQGLNVVIVSLDDDFLKETMKQLKDKYPDLKFRSVGVNFAPNTDYMKPIREATDDLHIQCIFNNAGFLVTGFFDQAPLPKLMVNMECNATAAFQITHHFVGKLVSKKSRGCVVFTSSVAGYVPTPFSSSYGATKAFISQLACCLHIELKSLGIDVCAVNPSPVASNFYAKLDHKIDLLESARKQAVTPDALPDEMFKSIGMCALRDVGGMALGTRMGTFFIAYNFFTGIFAAAAPYLPDYKTHSKTR 335
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A6V1NV24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV24_HETAK) HSP 1 Score: 312 bits (800), Expect = 1.890e-100 Identity = 159/284 (55.99%), Postives = 205/284 (72.18%), Query Frame = 2 Query: 371 LVALPFLVGILWSYGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 LVAL V + YGA + GG SGIGK+L LA QGLNVV+V+++DQ L DT A + A FP ++F VGA SPG YM+KI T DI+VQCVFNNAG+IVTGF+E +Q+AN+ECNATAA ++HHF+ R++ E ++GC+VFTSSV AY P PFS YGATKAFLS+ A SL++E R KGIDV +VHPSPV S+FY N H +E+MD AK+ A +P+ P +I KS+GR V RD+GG A+G+RV T ++S NFL +AF+ A +LPD+KK V R Sbjct: 30 LVALSRPVNLKKKYGAEWALVTGGSSGIGKSLCRRLAEQGLNVVVVALEDQLLKDTVAELKAAFPERQFIMVGANLSPGQKYMEKIAKATKDISVQCVFNNAGYIVTGFFEQVPVERQLANVECNATAAVAITHHFLSRLVSEGKRGCIVFTSSVVAYMPAPFSVTYGATKAFLSSFASSLAIENREKGIDVCSVHPSPVASRFYDNT-HKMEMMDFAKKGAASPDAYPDQILKSVGRCVLRDVGGFAVGMRVVTCLMSENFLASAFAAAARFLPDFKKYSVDR 312
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7S2I2H6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2H6_9STRA) HSP 1 Score: 311 bits (796), Expect = 1.280e-99 Identity = 155/271 (57.20%), Postives = 195/271 (71.96%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 Y A + G GSGIGKAL +LA QGLNVV+VS+DD FL T + A++P +FR VG TFSPGV Y+DKIK T DI V+ VFNNAGFIVTGF + + GK +AN+ECN TA ++HHF+ M+ +K KGCVV+TSSVA + PTPF+AMY +TKAFLS +A L +EV+ GIDV AVHPSPV S FY +DH IELM+ A+++AV P LP +IF+SIG RDLGGMA G R+GT L +NF F++ AP+LPDYKK++ R Sbjct: 58 YDAEWALVTGSGSGIGKALAFKLASQGLNVVLVSIDDDFLKQTMKDIQAEYPKLKFRSVGVTFSPGVPYLDKIKEATKDIEVKIVFNNAGFIVTGFLDQSPLGKLLANVECNTTACVNITHHFLSIMVAKKWKGCVVYTSSVAGFIPTPFAAMYASTKAFLSQMACCLHIEVQNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKSAVPPQDLPNDIFRSIGACALRDLGGMAWGTRMGTFFLPFNFFTEMFTVAAPFLPDYKKHNQTR 328
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: B8BU45_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU45_THAPS) HSP 1 Score: 308 bits (789), Expect = 3.720e-99 Identity = 152/275 (55.27%), Postives = 198/275 (72.00%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR*FSS 1234 Y A + G GSGIGKAL +LA QGLNVV+VS+DD+ L +T + ++P EFR VGA FSPGVDY+ +I T DI +QC+FNNAGFIVTGF + A K +AN+ECNATA+ V+HHF+ +++ KQKGC+VFTSSVA + PTPF+A Y ATKAF+S LA SL +EV++ GIDV AVHPSPV S FY ++H I+LM++A+++AV P LP EI +SIG RDLGGMA G R+ T + +NF F++ AP+LPDYK ++ R F S Sbjct: 13 YNAEWALVTGSGSGIGKALAFKLASQGLNVVLVSLDDEHLKNTMKELKQQYPKLEFRSVGACFSPGVDYLTQIDEATKDITIQCIFNNAGFIVTGFVDQTALPKLLANVECNATASFAVAHHFLQKLVSNKQKGCIVFTSSVAGFIPTPFAASYAATKAFVSQLACSLHIEVQSLGIDVCAVHPSPVASNFYEKVEHKIDLMEQAQKSAVGPEALPNEILRSIGACALRDLGGMAWGTRIFTFFIPFNFFTELFTVAAPFLPDYKTHNKNRKFKS 287
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7R9ZAP0_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAP0_9STRA) HSP 1 Score: 309 bits (792), Expect = 7.830e-99 Identity = 157/271 (57.93%), Postives = 190/271 (70.11%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 Y A + GGGSGIGKAL +LA QGLNVV+VS+DD L T + +P FR VG TFSPGVDYM +IK T DI V VFNNAGFIVTGF + A GK +AN+ECNATAA ++HHFV M+ +K KGC+VFTSSVA + PTPF+AMY +TKAFLS A SL +EV+ GIDV A+HPSPV S FY +DH IELM+ A+++AV P LP +I +SIG RDLGGMA R+GT L YNF F+ AP+LPDYKK++ R Sbjct: 71 YNAKWALVTGGGSGIGKALCFKLASQGLNVVVVSLDDDVLKTTMKELKETYPELSFRSVGCTFSPGVDYMKQIKDATKDIEVPIVFNNAGFIVTGFLDQAPIGKLLANIECNATAAVNITHHFVQVMVSKKLKGCIVFTSSVAGFIPTPFAAMYASTKAFLSQFACSLHIEVQNLGIDVCAIHPSPVASNFYDKVDHKIELMEAAQKSAVPPQQLPNDILRSIGACALRDLGGMAWSTRMGTFFLPYNFFTEMFTAAAPFLPDYKKHNKSR 341
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: F0YBY2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBY2_AURAN) HSP 1 Score: 308 bits (789), Expect = 8.840e-99 Identity = 147/271 (54.24%), Postives = 199/271 (73.43%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 YGA + GG +GIG+A+ EELA QGLNVV+ ++ D+FL A +SA + GQEF VG +F+PG DY++KIKA T+D +VQ VFNNAGFIVTGF+++ GK + N+ECNATAA ++HHF M+R+ KGC+VFTSS +AY P PF+ +YGATKAF+S A S++VE++ KGIDV +HPSPV S FY+ ++H I+ M+ K+ AV P+ LPREIF SIGR V RD+G A+G+R+G +L Y+ L ++VAP+LPDY +ND R Sbjct: 41 YGATWAVVTGGSTGIGRAICEELAKQGLNVVVAALPDKFLEPAVAELSAAYKGQEFVAVGVSFAPGADYLEKIKAATADKDVQIVFNNAGFIVTGFFDTQPLGKHLVNMECNATAAVAITHHFAAAMMRKGLKGCIVFTSSASAYIPNPFAIIYGATKAFMSQFAASIAVELQCKGIDVCVIHPSPVASNFYNKVEHKIDSMESFKKLAVDPSELPREIFASIGRCVLRDVGNTAVGMRLGVALLPYSALAHIIALVAPFLPDYVENDKKR 311
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7S1BQP0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP0_9STRA) HSP 1 Score: 309 bits (792), Expect = 1.080e-98 Identity = 154/262 (58.78%), Postives = 188/262 (71.76%), Query Frame = 2 Query: 437 GGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 G GSGIGKAL +LA QGLN+V VS+DD FL T A + A +P + R VG TFSPG +YM+ I T DI +Q VFNNAGFIV GF+E A GK +AN+ECNATA ++HHFV +MI +K KGC+VFTSSVA + PTPF+AMY +TKAF+S A S+ VE+ GIDV AVHPSPV S FY +DH IELM+ A+++AV P LP +I +SIGR RDLG MA G R+GT L YNF AF+M APYLPDYK ++ R Sbjct: 90 GAGSGIGKALCFKLASQGLNIVAVSIDDDFLKGTIAELRAMYPELDIRAVGCTFSPGSNYMEAIMKATEDIPIQIVFNNAGFIVLGFFEQAPLGKLLANVECNATATVAITHHFVKKMISQKLKGCIVFTSSVAGFIPTPFAAMYSSTKAFVSQFASSIHVELANSGIDVCAVHPSPVSSNFYDKVDHKIELMEAAQKSAVPPQDLPNDILRSIGRCALRDLGSMAWGTRMGTWFLPYNFFTVAFTMAAPYLPDYKNHNANR 351
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7S0UI44_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UI44_9STRA) HSP 1 Score: 307 bits (787), Expect = 2.710e-98 Identity = 153/271 (56.46%), Postives = 193/271 (71.22%), Query Frame = 2 Query: 410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222 Y A + GGGSGIGKAL +LA QGLNVVIVS+DD L T + FP EFR VG F+PGVDY+ +I+ T DI V VFNNAGF+VTGF++ A GK + N+ECNATAA +SHHF +++ K+KGC+VFTSSVA + PTPFS MYGATKAF+S LA SL +E+++ GIDV AVHPSPV S FY++LDH I++++ A + AV P LP +IF+SIG RDLGGMA+ R+GT L YNF F+ APYLPD+K ++ R Sbjct: 56 YDASWALVTGGGSGIGKALSFKLARQGLNVVIVSLDDDILKATMVQLKETFPKLEFRCVGVNFAPGVDYLKQIQEATKDIEVSIVFNNAGFLVTGFFDQAPLGKLLVNMECNATAAVNISHHFASKLVSAKKKGCIVFTSSVAGFIPTPFSGMYGATKAFVSQLACSLHIELQSLGIDVCAVHPSPVASNFYNDLDHKIDILESACKQAVPPEDLPDDIFRSIGCCALRDLGGMAVSSRMGTFFLPYNFFTEMFAAAAPYLPDWKTHNKTR 326 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig574.14138.1 >prot_L-elsbetiae_contig574.14138.1 ID=prot_L-elsbetiae_contig574.14138.1|Name=mRNA_L-elsbetiae_contig574.14138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp MDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCback to top mRNA from alignment at L-elsbetiae_contig574:2440..6420+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig574.14138.1 ID=mRNA_L-elsbetiae_contig574.14138.1|Name=mRNA_L-elsbetiae_contig574.14138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3981bp|location=Sequence derived from alignment at L-elsbetiae_contig574:2440..6420+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig574:2440..6420+ >mRNA_L-elsbetiae_contig574.14138.1 ID=mRNA_L-elsbetiae_contig574.14138.1|Name=mRNA_L-elsbetiae_contig574.14138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig574:2440..6420+ (Laminarionema elsbetiae ELsaHSoW15)back to top |