mRNA_L-elsbetiae_contig574.14138.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig574.14138.1
Unique NamemRNA_L-elsbetiae_contig574.14138.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: D7FJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS1_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 1.340e-173
Identity = 250/271 (92.25%), Postives = 258/271 (95.20%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            YGA    + GGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVS+KFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYES+AEGKQMANLECNATAAAK+SHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLA SLSVEVR KGIDVL+VHPSPV SQFYSNLDHTIELMDKAKE+AV PN LPREI KSIGRVVWRD+GGMA+GVRVGTKMLSYNFL TAFSMV PYLPDYKKNDVGR
Sbjct:   42 YGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 312          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A835YIP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP3_9STRA)

HSP 1 Score: 323 bits (828), Expect = 1.540e-104
Identity = 158/271 (58.30%), Postives = 201/271 (74.17%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            YGA    + GG SGIG+ALVE LALQG NVVIV++    L +T A +SA F  Q+F KVG  F+PGVDYM  IK  T  + +QC+FNNAG+IVTGFY+S    KQ AN+ECNA AAA+++HHF+GR+I  + +GCVVFTSS  AY P PF  MYGATKAFL+N A SL+ EVR KG+DVL++HPSPV + FYS LDH I++MDKA   AVA +TLP+ IFKS+GRVVWR++G  A+ +R+   +L  NFL  + ++ AP+LPDYK +DV R
Sbjct:   48 YGAEWALVTGGSSGIGRALVEALALQGFNVVIVALGGGLLDETHAALSAAFKDQKFVKVGVNFAPGVDYMTPIKEATDGLPIQCIFNNAGYIVTGFYDSTLGAKQAANMECNAVAAARITHHFLGRLIAARLRGCVVFTSSAVAYMPAPFCVMYGATKAFLTNFAGSLAAEVRCKGVDVLSIHPSPVATAFYSGLDHRIDMMDKAARGAVAASTLPKVIFKSVGRVVWREVGAPAVIMRLSASLLPGNFLYWSSAVAAPFLPDYKTHDVNR 318          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7R9WZI5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZI5_9STRA)

HSP 1 Score: 317 bits (811), Expect = 8.900e-102
Identity = 153/286 (53.50%), Postives = 205/286 (71.68%), Query Frame = 2
Query:  365 QKLVALPFLVGILWSYGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            Q ++A   +  +   Y A    + GGGSGIGK+L  +LA QGLNVVIVS+DD FL +T   +  K+P  +FR VG  F+P  DYM  I+  T D+++QC+FNNAGF+VTGF++ A   K M N+ECNATAA +++HHFVG+++ +K +GCVVFTSSVA Y PTPFS+ YGATKAF+S LA  L +E+++ GIDV AV+PSPV S FY+ LDH I+L++ A++ AV P+ LP E+FKSIG    RD+GGMA+G R+GT  ++YNF    F+  APYLPDYK +   R
Sbjct:   50 QLIMAFRAVPDLKKKYDAEWALVTGGGSGIGKSLAFKLASQGLNVVIVSLDDDFLKETMKQLKDKYPDLKFRSVGVNFAPNTDYMKPIREATDDLHIQCIFNNAGFLVTGFFDQAPLPKLMVNMECNATAAFQITHHFVGKLVSKKSRGCVVFTSSVAGYVPTPFSSSYGATKAFISQLACCLHIELKSLGIDVCAVNPSPVASNFYAKLDHKIDLLESARKQAVTPDALPDEMFKSIGMCALRDVGGMALGTRMGTFFIAYNFFTGIFAAAAPYLPDYKTHSKTR 335          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A6V1NV24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV24_HETAK)

HSP 1 Score: 312 bits (800), Expect = 1.890e-100
Identity = 159/284 (55.99%), Postives = 205/284 (72.18%), Query Frame = 2
Query:  371 LVALPFLVGILWSYGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            LVAL   V +   YGA    + GG SGIGK+L   LA QGLNVV+V+++DQ L DT A + A FP ++F  VGA  SPG  YM+KI   T DI+VQCVFNNAG+IVTGF+E     +Q+AN+ECNATAA  ++HHF+ R++ E ++GC+VFTSSV AY P PFS  YGATKAFLS+ A SL++E R KGIDV +VHPSPV S+FY N  H +E+MD AK+ A +P+  P +I KS+GR V RD+GG A+G+RV T ++S NFL +AF+  A +LPD+KK  V R
Sbjct:   30 LVALSRPVNLKKKYGAEWALVTGGSSGIGKSLCRRLAEQGLNVVVVALEDQLLKDTVAELKAAFPERQFIMVGANLSPGQKYMEKIAKATKDISVQCVFNNAGYIVTGFFEQVPVERQLANVECNATAAVAITHHFLSRLVSEGKRGCIVFTSSVVAYMPAPFSVTYGATKAFLSSFASSLAIENREKGIDVCSVHPSPVASRFYDNT-HKMEMMDFAKKGAASPDAYPDQILKSVGRCVLRDVGGFAVGMRVVTCLMSENFLASAFAAAARFLPDFKKYSVDR 312          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7S2I2H6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2H6_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.280e-99
Identity = 155/271 (57.20%), Postives = 195/271 (71.96%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            Y A    + G GSGIGKAL  +LA QGLNVV+VS+DD FL  T   + A++P  +FR VG TFSPGV Y+DKIK  T DI V+ VFNNAGFIVTGF + +  GK +AN+ECN TA   ++HHF+  M+ +K KGCVV+TSSVA + PTPF+AMY +TKAFLS +A  L +EV+  GIDV AVHPSPV S FY  +DH IELM+ A+++AV P  LP +IF+SIG    RDLGGMA G R+GT  L +NF    F++ AP+LPDYKK++  R
Sbjct:   58 YDAEWALVTGSGSGIGKALAFKLASQGLNVVLVSIDDDFLKQTMKDIQAEYPKLKFRSVGVTFSPGVPYLDKIKEATKDIEVKIVFNNAGFIVTGFLDQSPLGKLLANVECNTTACVNITHHFLSIMVAKKWKGCVVYTSSVAGFIPTPFAAMYASTKAFLSQMACCLHIEVQNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKSAVPPQDLPNDIFRSIGACALRDLGGMAWGTRMGTFFLPFNFFTEMFTVAAPFLPDYKKHNQTR 328          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: B8BU45_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU45_THAPS)

HSP 1 Score: 308 bits (789), Expect = 3.720e-99
Identity = 152/275 (55.27%), Postives = 198/275 (72.00%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR*FSS 1234
            Y A    + G GSGIGKAL  +LA QGLNVV+VS+DD+ L +T   +  ++P  EFR VGA FSPGVDY+ +I   T DI +QC+FNNAGFIVTGF +  A  K +AN+ECNATA+  V+HHF+ +++  KQKGC+VFTSSVA + PTPF+A Y ATKAF+S LA SL +EV++ GIDV AVHPSPV S FY  ++H I+LM++A+++AV P  LP EI +SIG    RDLGGMA G R+ T  + +NF    F++ AP+LPDYK ++  R F S
Sbjct:   13 YNAEWALVTGSGSGIGKALAFKLASQGLNVVLVSLDDEHLKNTMKELKQQYPKLEFRSVGACFSPGVDYLTQIDEATKDITIQCIFNNAGFIVTGFVDQTALPKLLANVECNATASFAVAHHFLQKLVSNKQKGCIVFTSSVAGFIPTPFAASYAATKAFVSQLACSLHIEVQSLGIDVCAVHPSPVASNFYEKVEHKIDLMEQAQKSAVGPEALPNEILRSIGACALRDLGGMAWGTRIFTFFIPFNFFTELFTVAAPFLPDYKTHNKNRKFKS 287          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7R9ZAP0_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAP0_9STRA)

HSP 1 Score: 309 bits (792), Expect = 7.830e-99
Identity = 157/271 (57.93%), Postives = 190/271 (70.11%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            Y A    + GGGSGIGKAL  +LA QGLNVV+VS+DD  L  T   +   +P   FR VG TFSPGVDYM +IK  T DI V  VFNNAGFIVTGF + A  GK +AN+ECNATAA  ++HHFV  M+ +K KGC+VFTSSVA + PTPF+AMY +TKAFLS  A SL +EV+  GIDV A+HPSPV S FY  +DH IELM+ A+++AV P  LP +I +SIG    RDLGGMA   R+GT  L YNF    F+  AP+LPDYKK++  R
Sbjct:   71 YNAKWALVTGGGSGIGKALCFKLASQGLNVVVVSLDDDVLKTTMKELKETYPELSFRSVGCTFSPGVDYMKQIKDATKDIEVPIVFNNAGFIVTGFLDQAPIGKLLANIECNATAAVNITHHFVQVMVSKKLKGCIVFTSSVAGFIPTPFAAMYASTKAFLSQFACSLHIEVQNLGIDVCAIHPSPVASNFYDKVDHKIELMEAAQKSAVPPQQLPNDILRSIGACALRDLGGMAWSTRMGTFFLPYNFFTEMFTAAAPFLPDYKKHNKSR 341          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: F0YBY2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBY2_AURAN)

HSP 1 Score: 308 bits (789), Expect = 8.840e-99
Identity = 147/271 (54.24%), Postives = 199/271 (73.43%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            YGA    + GG +GIG+A+ EELA QGLNVV+ ++ D+FL    A +SA + GQEF  VG +F+PG DY++KIKA T+D +VQ VFNNAGFIVTGF+++   GK + N+ECNATAA  ++HHF   M+R+  KGC+VFTSS +AY P PF+ +YGATKAF+S  A S++VE++ KGIDV  +HPSPV S FY+ ++H I+ M+  K+ AV P+ LPREIF SIGR V RD+G  A+G+R+G  +L Y+ L    ++VAP+LPDY +ND  R
Sbjct:   41 YGATWAVVTGGSTGIGRAICEELAKQGLNVVVAALPDKFLEPAVAELSAAYKGQEFVAVGVSFAPGADYLEKIKAATADKDVQIVFNNAGFIVTGFFDTQPLGKHLVNMECNATAAVAITHHFAAAMMRKGLKGCIVFTSSASAYIPNPFAIIYGATKAFMSQFAASIAVELQCKGIDVCVIHPSPVASNFYNKVEHKIDSMESFKKLAVDPSELPREIFASIGRCVLRDVGNTAVGMRLGVALLPYSALAHIIALVAPFLPDYVENDKKR 311          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7S1BQP0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP0_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.080e-98
Identity = 154/262 (58.78%), Postives = 188/262 (71.76%), Query Frame = 2
Query:  437 GGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            G GSGIGKAL  +LA QGLN+V VS+DD FL  T A + A +P  + R VG TFSPG +YM+ I   T DI +Q VFNNAGFIV GF+E A  GK +AN+ECNATA   ++HHFV +MI +K KGC+VFTSSVA + PTPF+AMY +TKAF+S  A S+ VE+   GIDV AVHPSPV S FY  +DH IELM+ A+++AV P  LP +I +SIGR   RDLG MA G R+GT  L YNF   AF+M APYLPDYK ++  R
Sbjct:   90 GAGSGIGKALCFKLASQGLNIVAVSIDDDFLKGTIAELRAMYPELDIRAVGCTFSPGSNYMEAIMKATEDIPIQIVFNNAGFIVLGFFEQAPLGKLLANVECNATATVAITHHFVKKMISQKLKGCIVFTSSVAGFIPTPFAAMYSSTKAFVSQFASSIHVELANSGIDVCAVHPSPVSSNFYDKVDHKIELMEAAQKSAVPPQDLPNDILRSIGRCALRDLGSMAWGTRMGTWFLPYNFFTVAFTMAAPYLPDYKNHNANR 351          
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Match: A0A7S0UI44_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UI44_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.710e-98
Identity = 153/271 (56.46%), Postives = 193/271 (71.22%), Query Frame = 2
Query:  410 YGAIAVALQGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHPSPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGMAIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR 1222
            Y A    + GGGSGIGKAL  +LA QGLNVVIVS+DD  L  T   +   FP  EFR VG  F+PGVDY+ +I+  T DI V  VFNNAGF+VTGF++ A  GK + N+ECNATAA  +SHHF  +++  K+KGC+VFTSSVA + PTPFS MYGATKAF+S LA SL +E+++ GIDV AVHPSPV S FY++LDH I++++ A + AV P  LP +IF+SIG    RDLGGMA+  R+GT  L YNF    F+  APYLPD+K ++  R
Sbjct:   56 YDASWALVTGGGSGIGKALSFKLARQGLNVVIVSLDDDILKATMVQLKETFPKLEFRCVGVNFAPGVDYLKQIQEATKDIEVSIVFNNAGFLVTGFFDQAPLGKLLVNMECNATAAVNISHHFASKLVSAKKKGCIVFTSSVAGFIPTPFSGMYGATKAFVSQLACSLHIELQSLGIDVCAVHPSPVASNFYNDLDHKIDILESACKQAVPPEDLPDDIFRSIGCCALRDLGGMAVSSRMGTFFLPYNFFTEMFAAAAPYLPDWKTHNKTR 326          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig574.14138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJS1_ECTSI1.340e-17392.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIP3_9STRA1.540e-10458.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9WZI5_9STRA8.900e-10253.50Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6V1NV24_HETAK1.890e-10055.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2I2H6_9STRA1.280e-9957.20Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8BU45_THAPS3.720e-9955.27Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9ZAP0_9STRA7.830e-9957.93Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
F0YBY2_AURAN8.840e-9954.24Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1BQP0_9STRA1.080e-9858.78Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0UI44_9STRA2.710e-9856.46Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig574contigL-elsbetiae_contig574:2440..6420 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score453.0
Seed ortholog evalue8.7e-125
Seed eggNOG ortholog2880.D7FJS1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Enoyl-(Acyl carrier protein) reductase
EggNOG OGs2QS5G@2759,COG0300@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-06_010420.1
Exons5
Model size1418
Cds size714
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816614.3619459-UTR-L-elsbetiae_contig574:2439..29261622816614.3619459-UTR-L-elsbetiae_contig574:2439..2926Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig574 2440..2926 +
1691683685.7709615-UTR-L-elsbetiae_contig574:2439..29261691683685.7709615-UTR-L-elsbetiae_contig574:2439..2926Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig574 2440..2926 +
1622816614.3757262-UTR-L-elsbetiae_contig574:3189..32131622816614.3757262-UTR-L-elsbetiae_contig574:3189..3213Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig574 3190..3213 +
1691683685.7878811-UTR-L-elsbetiae_contig574:3189..32131691683685.7878811-UTR-L-elsbetiae_contig574:3189..3213Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig574 3190..3213 +
1622816614.4445472-UTR-L-elsbetiae_contig574:6227..64201622816614.4445472-UTR-L-elsbetiae_contig574:6227..6420Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig574 6228..6420 +
1691683685.8388083-UTR-L-elsbetiae_contig574:6227..64201691683685.8388083-UTR-L-elsbetiae_contig574:6227..6420Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig574 6228..6420 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816614.390293-CDS-L-elsbetiae_contig574:3213..33321622816614.390293-CDS-L-elsbetiae_contig574:3213..3332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 3214..3332 +
1691683685.8003385-CDS-L-elsbetiae_contig574:3213..33321691683685.8003385-CDS-L-elsbetiae_contig574:3213..3332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 3214..3332 +
1622816614.406939-CDS-L-elsbetiae_contig574:4097..42301622816614.406939-CDS-L-elsbetiae_contig574:4097..4230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 4098..4230 +
1691683685.810203-CDS-L-elsbetiae_contig574:4097..42301691683685.810203-CDS-L-elsbetiae_contig574:4097..4230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 4098..4230 +
1622816614.419466-CDS-L-elsbetiae_contig574:4718..48221622816614.419466-CDS-L-elsbetiae_contig574:4718..4822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 4719..4822 +
1691683685.8194642-CDS-L-elsbetiae_contig574:4718..48221691683685.8194642-CDS-L-elsbetiae_contig574:4718..4822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 4719..4822 +
1622816614.4310591-CDS-L-elsbetiae_contig574:5869..62271622816614.4310591-CDS-L-elsbetiae_contig574:5869..6227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 5870..6227 +
1691683685.8289657-CDS-L-elsbetiae_contig574:5869..62271691683685.8289657-CDS-L-elsbetiae_contig574:5869..6227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig574 5870..6227 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig574.14138.1prot_L-elsbetiae_contig574.14138.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig574 3214..6227 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig574.14138.1

>prot_L-elsbetiae_contig574.14138.1 ID=prot_L-elsbetiae_contig574.14138.1|Name=mRNA_L-elsbetiae_contig574.14138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MDDQFLADTFALVSAKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQC
VFNNAGFIVTGFYESAAEGKQMANLECNATAAAKVSHHFVGRMIREKQKG
CVVFTSSVAAYCPTPFSAMYGATKAFLSNLAVSLSVEVRAKGIDVLAVHP
SPVDSQFYSNLDHTIELMDKAKETAVAPNTLPREIFKSIGRVVWRDLGGM
AIGVRVGTKMLSYNFLGTAFSMVAPYLPDYKKNDVGR*
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mRNA from alignment at L-elsbetiae_contig574:2440..6420+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig574.14138.1 ID=mRNA_L-elsbetiae_contig574.14138.1|Name=mRNA_L-elsbetiae_contig574.14138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3981bp|location=Sequence derived from alignment at L-elsbetiae_contig574:2440..6420+ (Laminarionema elsbetiae ELsaHSoW15)
TTAGCTGTAGCTCAGGAATGGAGACTGACTCTTGTCTGTTATGCTCCGGT CAGGATACGATCTCGGCTTGCTCGTCTGATGACGTCACTCTCACGGGCTA ATCCAAAGGGGGGTGATTTACGTTTGTGCCTGTCCTTTTTAAGACATGTG GCAGTTTACATCTCGAGGCGCCTTCGGGCGGAAAGAGACGGGGAGCTCTA GGCAGCTTCTAACTTTTAACTTGCGGGGCGCCTTTTCGCGGGGGCTCCGC GACTTGAACTGGGTTGTAGTGAAAACACACGAGCGGGCGGTATTTTCAGG CACACACAGCGGTGGCTGTGAGTAGTGCGACGGATCCTACGTTCAAAATC GCGATATCCGATCGCAAAAGCTCGTTGCGCTGCCGTTTCTGGTTGGCATT CTTTGGTCGTATGGTGCAATTGCCGTTGCATTGCAGGGTGGTGGCAGCGG CATCGGCAAGGCCCTGGTCGAAGAGCTGGCGCTGCAGGTAAGCGCACAGT TGTCGAGCATGTCTCGCAAGGTCCGCCCGGGGCTAGCACGACCCTCTTTT GTCGGGTCTTGCCAATCGCCACGGTTTTGCTATGGCCACCGGGCGTTTTT CGCGAGTATTTATCTCGGGCATTGTGAAGTGTTCCTGCCTTCACAAGCTA CAGCAGCTAGCCCTGCGTTTCCGTGGCTAAACCTTGTGAGGACGCGGCCA CCCCCTGCGTGTGTCCGACCTGTTTTTGTTGTGTGTGTATCACGTTTCAG GGGCTTAACGTCGTGATTGTGTCTATGGACGACCAGTTCCTGGCTGACAC GTTCGCGCTGGTGTCGGCAAAGTTTCCGGGGCAGGAGTTCCGCAAGGTCG GCGCAACGTTTTCTCCGGGGGTGGACTACATGGACAAGATCAAGTAGGCA AAGCGAAACCCATGCACGCACGCGTGATTTTCTTCGAGCACCTTTTCTTT GCGCGATCTAACTCCGAGATGCGGGCGAGGCCTTTGTGACCAAGCTGATG AGCCCCCTCGTGCTACATACACAACGCGGGTGACACAAGATACCACACCC CCTGGCCAGATTTTCTAAGCTCGATTCCTCCCGAGCCAAAAGAGTGCCAG TGCCTAAAGGGGGTGGCGTTGGAAAGATATAGTCGAGGGCTGTCTGAAAC CGTGTCGTTTGGCGCTGGCAGCCTCTTCGTTACGAAGTAATAAACCTCTA AAACTCGGTCCAGAGGGTGTGGTATCTTGTGTCGCCGACCGTACGCGCGT TGCTTGCACGAGTGTTGGAGCGTAAGTTCAGTTTGGAAGGGTGGCGCACC ATCACCCCCTGTTTTAGTTAATGTATATGGTACAAATGTCAGCAGTCTTC GTCCAATCTGTGAAGAAGTCGTTCCAGAGGGACTGTTATTGTAGGCGTAC TAAACCCCTGTTTCCCCATCCCAGATATACTCGCACAAAACCCGTCGGGT TAGGGCTAGGGTGATCTGACCTCCTCGTGATGTGTGAACACTCCATGCAT GACGCGTGGTGCATGCTGGTGTTATTTTTCAGATCGAAAGCCCATCTGCC TGCCGTTCGTTCCTCGCTAATTAGCTGCGCGATAATCTACGTTCATTTGT ATTCATACGTATGCCGTACATTTTTGTGTCGTGTTTTTGGTCGCGCATTT GCTCGCAGGGCCGTCACTTCCGACATCAACGTCCAGTGCGTGTTCAACAA CGCGGGGTTCATCGTGACCGGCTTCTATGAGTCTGCTGCCGAGGGCAAGC AGATGGCAAACCTAGAGTGCAACGCCACCGCAGCGGCGAAGGTCGGTTGG TTGTGCTGATGTGTAGCCCCTCGTCCATGCTTGGTCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCTCCCTTTTCTCTTTTTTTACGGTCTATTCTTC CTTTCTCTNNNNNNNNNNGGGCAAACCGCGGGTGGCGCGCCCCCCCGGGC GCGAGGGGGGGGTGGGTGGGTGTGTGTTTAGCCCCCCGTCCCTGTTTTGT CCCCCCCCCCCCCCCCCCCTCCGTCTGTTTGTATTTTTACTAATGTTTAC AGATGTCTGCAGTCTATTTTGTGCACTCCTGATGAACTCTTGTCCCCACC CGCCCCGCCCGCCCACGTAGCCCCTTTTGACTATGAGCTCTTCGCTTGGG ATGGTCTGGCCGCCGTTGAAATGTGCGCACCGTTCGCTGCCTCTAATCAA GACATGCTTCAAGCGAAAACACGGCCGAAATCCCCACCTCCCTTGCCCCC TTTTGCTTGTCCCTTATGCCTTTCTGCAGGTCTCGCACCACTTTGTGGGC CGAATGATCCGCGAGAAGCAGAAGGGCTGCGTGGTGTTCACGTCCTCCGT GGCGGCCTACTGCCCAACTCCCTTCTCGGCAATGTGAGCGATGCGACAAC ACAAGAGCATACATTGAAAGAGAAACCGACAGTAAATCCAAAATGGAACC TAACCCATATTGAGACGGGACTCCGTGAGATTCAATCGGTATCCCATACA GTGACGTAATTTCGGGCCGGCCGAGTAGACAAACACCTATAATAAGTACG AGAAATATTCACCGTCTCCCCTGCATCTCTGCCAGGTCAAACAGAGCATA TATTTTATATTTCGTCATTTGTTTTGATACGAAGTATATGGTGTGGAACT CGTTTTCTGCGAAACAGATATGAATACAGAATCGGAGTGTTATTATTTCG CAATTCCTCCGCCGATACTGGCGAAAGCCCCCAGAAGATCGCCACACAGT AGTAGCAATAGTACGTAGCAGTGAAGGCGTGACCGAAATCAAAGCGTACC GACTCTATTGTGTCGCCACTCAGGCAACCCCTACGAGGCATGGGAGTCAA AATCTATACCGCAAAGGGGGCCGTTTAGATTAGCAAACTCTGTAACCTCA TCGCGATTGTGGGGCCCACAAGTGTCTACCCGCTTTCAAATCCCTGCTGC CTTGGTGCGCACGGTTACAGAGTTTTCAACCTGGCACGACCCCAAGCCGC GTTTTTTTTCTTCACATTTATTTCCAGTGCTCGACGGGCTCCTCGCCACG AGGGCATCTTGCCAGAGTGCTGAACCGTGGTCACGCAGACAGAAGGACTC GTCTCCCCGAGGCCCCCACTCCCACCTTCTGCGGTGCTTGCCTGAGGCTT TTGTCGCGAGAAGAGTTCAGCCGTCCTCGAAGCCGCGAATAAACAAATTG TGGGCTACATAGGTTCCGTTTATCTTCAAAAAAAAAATAAAAAATGACAG GGGCACCGTCATCCGTTCCGTTGTACGTAGCTCCAAACATATCCCCGTGC GGCCCCCCTTCTACTACATACGGTAGATACTCCGGATGACGGTCTGAAGG GCCTATTACATACTTACATCTGTCGTCATACATCAGACTCTCTCCCCGTG CGGTGTGGGCGAACGAAACGATGGACACAGGTACGGCGCAACGAAGGCTT TCCTGTCCAACTTGGCGGTGTCCCTCTCGGTGGAGGTCCGCGCCAAGGGC ATCGACGTGCTCGCCGTGCACCCTTCCCCCGTGGACAGCCAGTTCTACAG CAACCTGGACCACACCATCGAGCTCATGGACAAGGCGAAGGAGACGGCGG TGGCGCCGAACACGCTGCCCAGGGAAATTTTCAAGAGCATCGGGAGGGTG GTGTGGCGAGACCTGGGCGGCATGGCCATCGGGGTTCGCGTGGGCACCAA GATGCTGAGCTATAACTTCCTCGGAACGGCGTTTTCGATGGTGGCGCCGT ATTTGCCGGACTACAAGAAGAACGACGTTGGTCGGTGATTTTCCTCTTTT TTTTCGTTCAACCAAGTATTTTTACAGTACATACTGTTTATTTACACCCT GATAGGGGATCTTTAGGACTACGCCATACGCGCCCTCTGAGCGTGTGTGC GGGACCACGTTCTGACCTGCGGACCACGCGTCCCCCGAAAGCGGCGCAGT CGCATTTGCGGCGATTTCTCAGCCCCACGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig574:2440..6420+

>mRNA_L-elsbetiae_contig574.14138.1 ID=mRNA_L-elsbetiae_contig574.14138.1|Name=mRNA_L-elsbetiae_contig574.14138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig574:2440..6420+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGACCAGTTCCTGGCTGACACGTTCGCGCTGGTGTCGGCAAAGTT
TCCGGGGCAGGAGTTCCGCAAGGTCGGCGCAACGTTTTCTCCGGGGGTGG
ACTACATGGACAAGATCAAATGGACGACCAGTTCCTGGCTGACACGTTCG
CGCTGGTGTCGGCAAAGTTTCCGGGGCAGGAGTTCCGCAAGGTCGGCGCA
ACGTTTTCTCCGGGGGTGGACTACATGGACAAGATCAAGGCCGTCACTTC
CGACATCAACGTCCAGTGCGTGTTCAACAACGCGGGGTTCATCGTGACCG
GCTTCTATGAGTCTGCTGCCGAGGGCAAGCAGATGGCAAACCTAGAGTGC
AACGCCACCGCAGCGGCGAAGGGCCGTCACTTCCGACATCAACGTCCAGT
GCGTGTTCAACAACGCGGGGTTCATCGTGACCGGCTTCTATGAGTCTGCT
GCCGAGGGCAAGCAGATGGCAAACCTAGAGTGCAACGCCACCGCAGCGGC
GAAGGTCTCGCACCACTTTGTGGGCCGAATGATCCGCGAGAAGCAGAAGG
GCTGCGTGGTGTTCACGTCCTCCGTGGCGGCCTACTGCCCAACTCCCTTC
TCGGCAATGTCTCGCACCACTTTGTGGGCCGAATGATCCGCGAGAAGCAG
AAGGGCTGCGTGGTGTTCACGTCCTCCGTGGCGGCCTACTGCCCAACTCC
CTTCTCGGCAATGTACGGCGCAACGAAGGCTTTCCTGTCCAACTTGGCGG
TGTCCCTCTCGGTGGAGGTCCGCGCCAAGGGCATCGACGTGCTCGCCGTG
CACCCTTCCCCCGTGGACAGCCAGTTCTACAGCAACCTGGACCACACCAT
CGAGCTCATGGACAAGGCGAAGGAGACGGCGGTGGCGCCGAACACGCTGC
CCAGGGAAATTTTCAAGAGCATCGGGAGGGTGGTGTGGCGAGACCTGGGC
GGCATGGCCATCGGGGTTCGCGTGGGCACCAAGATGCTGAGCTATAACTT
CCTCGGAACGGCGTTTTCGATGGTGGCGCCGTATTTGCCGGACTACAAGA
AGAACGACGTTGGTCGGTGAGTACGGCGCAACGAAGGCTTTCCTGTCCAA
CTTGGCGGTGTCCCTCTCGGTGGAGGTCCGCGCCAAGGGCATCGACGTGC
TCGCCGTGCACCCTTCCCCCGTGGACAGCCAGTTCTACAGCAACCTGGAC
CACACCATCGAGCTCATGGACAAGGCGAAGGAGACGGCGGTGGCGCCGAA
CACGCTGCCCAGGGAAATTTTCAAGAGCATCGGGAGGGTGGTGTGGCGAG
ACCTGGGCGGCATGGCCATCGGGGTTCGCGTGGGCACCAAGATGCTGAGC
TATAACTTCCTCGGAACGGCGTTTTCGATGGTGGCGCCGTATTTGCCGGA
CTACAAGAAGAACGACGTTGGTCGGTGA
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