|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 690 |
| Cds size | 687 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816612.344639-CDS-L-elsbetiae_contig5725:5560..6193 | 1622816612.344639-CDS-L-elsbetiae_contig5725:5560..6193 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5725 5561..6193 - |
| 1691683684.5095878-CDS-L-elsbetiae_contig5725:5560..6193 | 1691683684.5095878-CDS-L-elsbetiae_contig5725:5560..6193 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5725 5561..6193 - |
| 1622816612.355374-CDS-L-elsbetiae_contig5725:6885..6939 | 1622816612.355374-CDS-L-elsbetiae_contig5725:6885..6939 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5725 6886..6939 - |
| 1691683684.5187469-CDS-L-elsbetiae_contig5725:6885..6939 | 1691683684.5187469-CDS-L-elsbetiae_contig5725:6885..6939 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5725 6886..6939 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5725.14119.1 >prot_L-elsbetiae_contig5725.14119.1 ID=prot_L-elsbetiae_contig5725.14119.1|Name=mRNA_L-elsbetiae_contig5725.14119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
SNGRGVGEKPVEAARKKKVVLASEFSDSSSEDESDTGNTAAAVGTTGTGT
GSSSSSSGSGGAGRRHREGPTPRPPPQQQQQQQPAGKTTVSASSSSSSEQ
SVRRQPSSLFFSGTSRRPRQQPRSQLDGRHRTSDPDVAATSTPIAWGSGG
TGTTGDRTAAAAAASTAAAAARGQTTEHTTVVAAPVSGRSGRVGWMIDPT
PTRRLSPAPVVDVLLSGRKRKGNSRSGRG back to topmRNA from alignment at L-elsbetiae_contig5725:5559..6939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5725.14119.1 ID=mRNA_L-elsbetiae_contig5725.14119.1|Name=mRNA_L-elsbetiae_contig5725.14119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1381bp|location=Sequence derived from alignment at L-elsbetiae_contig5725:5559..6939- (Laminarionema elsbetiae ELsaHSoW15)
AGCAACGGTCGGGGTGTCGGCGAGAAGCCCGTTGAAGCGGCACGCAAGAA
GAAGGTAGGTGCCTACTGTGTGTGCCTGCACCCTCATCGGATCCGTTTTT
CTTTTCTTTCCATGTACGTAGGTATGCATGGTGGTTTTTGCGATTATAGT
AGAGCGTGTTACGACCATGCCGCCGCTGTTCGTGTTCACGTGCTGGATGC
GGCTGCCTAGGTGCACGTAGATGTGGCTCCGTTCTCGCACTCTCTTAAGC
CTACAAGTGCCTTCCCGGAGAACGATCGATTATTTAAGGAAATAACGGTC
GGTAAGACTTCGAATCGGAAGCTGCCTGGAAAAGCAAAGGGTGCACGGGC
GGTAGAGGGGTGTTTGGAATGCCTTGTGTGTGTGCGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTTCTGTTATTTGCTTAT
TCGTCGTCTGCCCCACTGGCCCCCTTCCTCCACTACGACTAGCTAGACGA
CCCAACCGGGGTCACACAGGAGGGGGCTCCTGCGGTGTATGTATGTGTAT
GTGTGTGTGTTCGTGTGTGTGTGTTTCTTTTGTTTTTATCGATCACATTA
AACCAGCGCTCGAGGGGCATCTTCCCAGAGCTCTGATCCGTTTGCCACAC
AGCAGGTGGGCGGGAGAACTGTTTTCGTTCCTCAGTCTTCGCGCCGCTTT
CTTTTCTCGCCGGTCCCACCTCCCGCGTGTCTGCGCCTTGTCCCAGGTGG
TCCTGGCGAGTGAGTTCAGCGACAGCAGCTCCGAAGACGAGAGCGACACC
GGCAACACCGCTGCCGCTGTCGGTACCACCGGCACCGGCACCGGCAGCAG
CAGCAGCAGCAGCGGCAGCGGCGGCGCCGGCAGGAGACATCGAGAAGGGC
CAACACCGCGGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCCGGCAGGT
AAAACGACGGTCTCGGCGTCGTCGTCGTCGTCGTCGGAGCAATCTGTGCG
CCGCCAACCATCGTCCCTTTTCTTTTCCGGCACGTCGCGCAGACCGCGGC
AGCAGCCGCGATCGCAGCTCGACGGCCGCCACCGAACCAGCGACCCGGAT
GTGGCGGCCACGTCGACCCCTATCGCGTGGGGCTCCGGTGGTACGGGTAC
CACCGGCGATCGGACTGCTGCTGCTGCTGCTGCTTCGACAGCGGCGGCGG
CGGCGAGAGGGCAAACGACTGAGCACACGACGGTAGTAGCAGCGCCCGTG
TCGGGGCGATCGGGGCGCGTGGGGTGGATGATTGACCCAACACCGACACG
GAGACTGTCACCAGCGCCTGTCGTCGACGTTTTGCTGTCCGGGCGAAAAA
GGAAAGGGAACAGCAGGAGCGGGCGGGGGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5725:5559..6939- >mRNA_L-elsbetiae_contig5725.14119.1 ID=mRNA_L-elsbetiae_contig5725.14119.1|Name=mRNA_L-elsbetiae_contig5725.14119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig5725:5559..6939- (Laminarionema elsbetiae ELsaHSoW15)
AGCAACGGTCGGGGTGTCGGCGAGAAGCCCGTTGAAGCGGCACGCAAGAA
GAAGAGCAACGGTCGGGGTGTCGGCGAGAAGCCCGTTGAAGCGGCACGCA
AGAAGAAGGTGGTCCTGGCGAGTGAGTTCAGCGACAGCAGCTCCGAAGAC
GAGAGCGACACCGGCAACACCGCTGCCGCTGTCGGTACCACCGGCACCGG
CACCGGCAGCAGCAGCAGCAGCAGCGGCAGCGGCGGCGCCGGCAGGAGAC
ATCGAGAAGGGCCAACACCGCGGCCGCCGCCGCAGCAGCAGCAGCAGCAG
CAGCCGGCAGGTAAAACGACGGTCTCGGCGTCGTCGTCGTCGTCGTCGGA
GCAATCTGTGCGCCGCCAACCATCGTCCCTTTTCTTTTCCGGCACGTCGC
GCAGACCGCGGCAGCAGCCGCGATCGCAGCTCGACGGCCGCCACCGAACC
AGCGACCCGGATGTGGCGGCCACGTCGACCCCTATCGCGTGGGGCTCCGG
TGGTACGGGTACCACCGGCGATCGGACTGCTGCTGCTGCTGCTGCTTCGA
CAGCGGCGGCGGCGGCGAGAGGGCAAACGACTGAGCACACGACGGTAGTA
GCAGCGCCCGTGTCGGGGCGATCGGGGCGCGTGGGGTGGATGATTGACCC
AACACCGACACGGAGACTGTCACCAGCGCCTGTCGTCGACGTTTTGCTGT
CCGGGCGAAAAAGGAAAGGGAACAGCAGGAGCGGGCGGGGGGTGGTCCTG
GCGAGTGAGTTCAGCGACAGCAGCTCCGAAGACGAGAGCGACACCGGCAA
CACCGCTGCCGCTGTCGGTACCACCGGCACCGGCACCGGCAGCAGCAGCA
GCAGCAGCGGCAGCGGCGGCGCCGGCAGGAGACATCGAGAAGGGCCAACA
CCGCGGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCCGGCAGGTAAAAC
GACGGTCTCGGCGTCGTCGTCGTCGTCGTCGGAGCAATCTGTGCGCCGCC
AACCATCGTCCCTTTTCTTTTCCGGCACGTCGCGCAGACCGCGGCAGCAG
CCGCGATCGCAGCTCGACGGCCGCCACCGAACCAGCGACCCGGATGTGGC
GGCCACGTCGACCCCTATCGCGTGGGGCTCCGGTGGTACGGGTACCACCG
GCGATCGGACTGCTGCTGCTGCTGCTGCTTCGACAGCGGCGGCGGCGGCG
AGAGGGCAAACGACTGAGCACACGACGGTAGTAGCAGCGCCCGTGTCGGG
GCGATCGGGGCGCGTGGGGTGGATGATTGACCCAACACCGACACGGAGAC
TGTCACCAGCGCCTGTCGTCGACGTTTTGCTGTCCGGGCGAAAAAGGAAA
GGGAACAGCAGGAGCGGGCGGGGG back to top
|