mRNA_L-elsbetiae_contig5705.14089.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: A0A6H5K0B2_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B2_9PHAE) HSP 1 Score: 292 bits (747), Expect = 4.480e-84 Identity = 132/165 (80.00%), Postives = 148/165 (89.70%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTNLITPQFTFYGKKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFFDTETMKSGPKGSAASKQEKEKPGRVHGFGLFERGYSHRSPGFDPPVLVKEMLAE 979 FKLLAGTFTDYSWPDE GSWVGMDGVEYDV ISTRSDTC GHRGSDIFPYGI++++ITPQFTFYGKKAPNT+QNR L++LFDP ENALPFIYDNF+WSHC+EMG+DFSDFFDT TMKSGPKG+AAS++EK K RV GFGLFE+G H PGFDPP VK++L E Sbjct: 606 FKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYGIMSDVITPQFTFYGKKAPNTMQNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTTRVEGFGLFEKGDIHLQPGFDPPAAVKKILVE 770
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: D7G3A2_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A2_ECTSI) HSP 1 Score: 287 bits (735), Expect = 6.250e-84 Identity = 130/168 (77.38%), Postives = 149/168 (88.69%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTNLITPQFTFYGKKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFFDTETMKSGPKGSAASKQEKEKPGRVHGFGLFERGYSHRSPGFDPPVLVKEMLAERSQ 988 FKLLAGTFTDYSWPDE G+WVGMDGVEYDV ISTRSDTC GHRGSDIFPY I+T++ITPQFTFYGKKAPNT++NR L++LFDP ENALPFIYDNF+WSHC+EMG+DFSDFFDT TMKSGPKG+AAS +EK + RV GFGLF++G H PGFDPPV VK++L ER + Sbjct: 441 FKLLAGTFTDYSWPDEVGTWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASDEEKSESTRVEGFGLFKQGDIHLQPGFDPPVAVKKILVEREE 608
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 113 bits (283), Expect = 2.780e-22 Identity = 58/136 (42.65%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTNLITPQFTFYGKKAP-----NTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFF----DTETMKS-GPKGSAAS 862 + +L G TD+ WPD ++ DG Y IS S+ C GHRGSD+FP+ IL N + G K NT+ NR ++ FDPR NALP++YD F+W+HCAE GFD D + D E + GP G A S Sbjct: 588 YSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEEASRGEGPGGQAMS 723
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 106 bits (264), Expect = 5.720e-20 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTNLITPQFTF-----YGKKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFFDTETMKS 838 + +L G TD+SWPD ++ DG ++S ++C+GH GSD+FP+G+L + T F + N L NR ++ FDPR NALP++YD F+W HCA G+DF D + + T KS Sbjct: 626 YVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLL-DTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQSSTKKS 747
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.660e-17 Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTN---LITPQFTFYG-KKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFFD 820 F L G TD+ WPD S+ DG T ST DTC+GH GSD+FP+G+L + + G ++ N L NR ++ + D R N LP++YDNF W HC + G DF D +D Sbjct: 566 FSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAWD 681
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 2.650e-17 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGIL---TNLITPQFTFYGKKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSD 811 + +L G TD++WPD+ + DG ++S +TC GH GSD+FP+GIL T+ + G + NTL NR L++ FD R N++ ++YD F W+HC GFDF+D Sbjct: 641 YAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFND 752
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: D8LC47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC47_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 3.340e-17 Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGIL---TNLITPQFTFYGK-KAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSD 811 + +L G TD++WPD+ + DG +IS +TC GHRGSD+FP+G+L T+ T + G N L NR ++ FD R N+LP++YD F W+HC G +F D Sbjct: 138 YSILTGHITDFTWPDDDVTVTKPDGTVEVESISLYGETCSGHRGSDVFPFGLLDSDTDGFTIKTGIRGNLDTGNQLTNREALQAFDARSNSLPYVYDTFKWTHCEADGVNFDD 250
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 3.520e-17 Identity = 48/119 (40.34%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTN---LITPQFTFYGK-KAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFFDTET 829 F L G T++ WPD S+ +G T S D CYGH GSD+FP+G+L N + + G + NTL NR + D R N LP++YDNF W HC + G DF D +D T Sbjct: 687 FSALTGQLTNFHWPDSELSYTDTNGDTVVETTSNYGDKCYGHGGSDVFPFGLLDNDDDALKIKTGMQGNGETGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAWDAST 805
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 3.950e-17 Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTN----LITPQFTFYGKKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSDFFDTETMKS-GPKG 850 F L G TD+ WPD S+ DG T S DTC+GH GSD+FP+G+L + ++ N L NR ++ + D R N LP++YD+F W HC + G DF D +D T + G KG Sbjct: 395 FSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAWDASTASNDGRKG 521
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.780e-16 Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 485 FKLLAGTFTDYSWPDEAGSWVGMDGVEYDVTISTRSDTCYGHRGSDIFPYGILTNLITPQFTFY-----GKKAPNTLQNRALVRLFDPRENALPFIYDNFDWSHCAEMGFDFSD 811 + +L G TD++WPD + DG +IS DTC GHRGSD+FP+G+L + T FT N L NR +++ FD R N+LP++YD F W+HC G +F D Sbjct: 606 YSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDS-DTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDD 718 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5705.14089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5705.14089.1 >prot_L-elsbetiae_contig5705.14089.1 ID=prot_L-elsbetiae_contig5705.14089.1|Name=mRNA_L-elsbetiae_contig5705.14089.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp MDGVEYDVTISTRSDTCYGHRGSDIFPYGILTNLITPQFTFYGKKAPNTLback to top mRNA from alignment at L-elsbetiae_contig5705:360..3311- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5705.14089.1 ID=mRNA_L-elsbetiae_contig5705.14089.1|Name=mRNA_L-elsbetiae_contig5705.14089.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2952bp|location=Sequence derived from alignment at L-elsbetiae_contig5705:360..3311- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5705:360..3311- >mRNA_L-elsbetiae_contig5705.14089.1 ID=mRNA_L-elsbetiae_contig5705.14089.1|Name=mRNA_L-elsbetiae_contig5705.14089.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=918bp|location=Sequence derived from alignment at L-elsbetiae_contig5705:360..3311- (Laminarionema elsbetiae ELsaHSoW15)back to top |