mRNA_L-elsbetiae_contig57.14082.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig57.14082.1 vs. uniprot
Match: D8LF01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF01_ECTSI) HSP 1 Score: 2181 bits (5651), Expect = 0.000e+0 Identity = 1243/1851 (67.15%), Postives = 1388/1851 (74.99%), Query Frame = 1 Query: 55 DTLDAGVARSQAREAREASRAGHDAPSYHLGDPPEPWEEDIGDIGERVGRQGRKVIEYAAKMQAMGIDERSLAGNNNPIADHVATMGQDKMRLLPGVSVAPIRLAADHEGASNPEAI-KEEDDAASVSSGWSDISEENEATPSHARKDVNANAATAGLDPGEVEDEPSNGIDLIDDPEIRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVEIYPSALRYTYPKWLAQYRKLPGAIATHRRMTLLMQGVELRDRWRRVNADEKHGSLPPSVLHAYLCIILALIDNDTCPRFCRMNRVKVVGACGLLALSVHFKARDRSQRLACRILRELAREPLLIFELLNAGVAEYLSRLLPKLRETCIDRLLEALDAVDSMAFSAMRFCKLSSANPNRGQGNSALVAALVADGSSIGGLESEIRIPNGDELATTVCYHSVLHEMLAYAGRALELLVQGLQSQEQLVPDMSLALFLQLCSRQEGRDGIEATDGIAMLQPLISGCQAQDSPVFLRGLACAIAIARQGVPGSAPGSTGEGATPSATAPPGLSLPRAGGVGRSGPAKPHPLDIEGKLYHDLVEILDAPPPDPLKAVRGLVRMGSLEAVMRFLVREDDEEGDGAEDNGSVSSSGGTVVGPGGSRAKKPSEAPRGPHYFRLKQRHACLGAVALHGLIVLAGPHPAIMTGSTLRYLCYSIQVAYIDLTVGKLAPGVGYPLMFRSIQLACRALAFLATSDGVGVRSKTEAEGEGRVVETG-GAHEKGDHGGAV--EHGPLRRVADSLVSTTAINEVACMAQMPSRAAWTGDEGFMYRHLERTVSSAAILVAGVCPVPAGERDPFTRFDEPEDEQWSLGLCQPLMERLVSTLGGPLCSTLMVAENLEIIAHTCRALAKLSDSNTTIQMLLDSHDVMKAIIRLGPRAPAVLPAIAQSGAEVTSRDESLSPNQPSRT-HGDGTTPPPGTQEPAKKSTTRGG-QLSTTAATKKGLPMASSGNSYGHRAEGDPLRSEERRGQFDSKRGRGGPDGNDESFSTAQLLWAGYEVREGEITDTSTRKLCSLPFDYFRLVANVARVPSGRAIVQSSGTLKRCLERMAFNLSGCPAAQLATLRCRSEICVLVGRMAGTYDRKSGAANEFILYHRYQTLRVLLGMLGASPEAGKPFGATRTHMELARYNAAYALAEICRDTLRSVPLVADAGGLHLACRVANDLMSPMPLLKQVLLILQGAGNFPDGVYASLIADPAVLRSLNRIANNALPGFRP-VTSGGEVRPSSSASERKRPNTPPVLERGGTRGAGRGGGAKLNGQGRVPPPLALNLLQPCSPESRQISELASEVAYLVGTSAG-CKLPVTPSPPSRRKEATLLAKQPHERSTA-KEPIETT-ARQKHATKGERADLGPASPTRHASTIEPGRHDARADEVQRSMVTRVTSGGRGVGVVTGRPGTYSGCGVTNCKGLGFSGEHGDMDGNTPHGAFVLREAENGGGGNESAPCKNKTRNASGVTPGSDGTGAKDETAPDEHDTGSPITASPDV--------------------VVVATPLALLSAREPSFRNELIRRKEHYSLGGTRKKWVINDDEIARDSLLDEPILGSDKRKAPSGPSVAVERGRTTKPLRRPWSSRQHSKGSAPAPVDVSESPLMASTRPTEVHPALDSRRIDPTRQREDN--------------PQSLRGRCSRSGGKEFVTFARPAAHWSVTKSLSASPGRVRSKGVRVSNDTNDGGGGLVVGRFACRGYLHDPTFSDQNAVILHPRLPLIAGGGG-GFSQVPEDSTLAELVAPPVGKVCPIGGGANKKLEPYRNVVDVLHHSVGVSGGRTAGKK 5472 DTLD VAR+QAREARE+ RA SYHLG PPEPWE +GD GERVGRQGR V+EYAAKM AMGI+E+SLAG NNPIADHVATMGQDKMRLL V D GA +A+ +EE+DA SVSSGWS+ S+E+ A PS A++D AA +G D GE ED +G+DLIDDP+IRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVEIYPSALRYT+P+W+AQYR+LPGAIATH+RMTLLMQG ELR RWRR+NADEKHGSLPPS+LHAYLCIILALID DTCPRFCRMNRVKVVG GLLALSVHFKA DRSQRLACRILRELAREPLLI+ELLNAGVAEYLSRLLPKLRET IDRLLEALDAVDSMAFSAMRFCKL SANP+RGQGNSAL+AALVADGSSIGGLESEIR+P+G++LATTVCYHSVL EMLAYAGRALELLVQG+QSQE++ PDMSLALFLQLCSRQEGRDGIEATDG+AML+PLISG QAQ+SPVFLRGLACA+AIARQG PGSAPGSTGEGATPSATAPPGLSLP+AGGVGRSGP KPHPLD EGKLY DLV ILDAPPP PL AVRGLVRMGSLEAVMRFLVREDD E G +D+ SVS SGG G +KP GPHYFRLKQRHACLGAVALHGL VLAGPHPAIMTG TLRYLCYSIQ+AYIDLTVG LAPGV YPLMFRSIQLACRALAFLATS G + + E V+ G G E +V +HGPLRRVADSL+STTAINEVAC+AQMPSRAAW GDEG MYRHLERTVSSAAILVAGVCPVPAGERDPFTRFDEPEDE SL LCQPLMERLV+T+GG LCSTLMVAE+LEIIAH CRALAKLSD+NTT+QMLLD+HDVMKA+IRLGPRAPAVLP A S E R S SP++ +R+ HG+G P + EP K + GG Q TTA + +AS G R GD + GR G G + S Q +GY VREGE+ D STRKLCSLPFDYFRLVAN+ARVPSGRA+VQSSGTLKRCLER+A ++SGCPAA+LATLRCRSEICVL+GRMAGTYDRK+GAANEFIL+ RYQTL VLLGML E + FGATR H+ELAR+NAAYAL IC DT+RSVP+VADAGG+HLAC VAND+ SPMPLLKQVL IL GAG+FPDGVYASLIA+P VLRSLNRIANNA PGFRP TSG + RP+SSAS RK T P ++ RG G GG K++ + R+P + L+P S ESR IS+LA+EVAYLVG A C P P+ P +E+ + + R A K+ E T AR + K A+ S T A+ +E G AR + S+ T T + V+G+PGTYSGCGVT+CKGLGF+GEHGD+ GNTPH AFV+R + G G ES + V GSD GA+ + GS A P VV ATPLALLSARE SFR+ELI RKEHYSLGGTRKK V E SL L + +R P G A +RGR+ + RR SS + +G +PAPVD+ +SPL+ASTRPT P + R P R + D S +C+ GGKEFVTFARPAAHWSVT SLSASPGR RSKGVR+ N T GG G VVGRFA RGYL DPTF D N VILHPRLPLI GG G GFSQVP+ STLAELV P K GGA K EPYRN V+VL H VGVSG R AGK+ Sbjct: 3 DTLDDAVARAQAREARESLRANQHVQSYHLGGPPEPWETALGDTGERVGRQGRTVVEYAAKMNAMGINEKSLAGQNNPIADHVATMGQDKMRLLSSNPVVHAPTMGDLGGAPTSDAVAEEEEDAVSVSSGWSEDSDESTAAPSQAQRDSATAAAASGRDSGESEDVSCDGLDLIDDPDIRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVEIYPSALRYTFPRWIAQYRELPGAIATHKRMTLLMQGAELRTRWRRINADEKHGSLPPSLLHAYLCIILALIDTDTCPRFCRMNRVKVVGGGGLLALSVHFKAGDRSQRLACRILRELAREPLLIYELLNAGVAEYLSRLLPKLRETSIDRLLEALDAVDSMAFSAMRFCKLRSANPSRGQGNSALIAALVADGSSIGGLESEIRLPDGNKLATTVCYHSVLQEMLAYAGRALELLVQGVQSQEEIAPDMSLALFLQLCSRQEGRDGIEATDGMAMLRPLISGAQAQNSPVFLRGLACAVAIARQGAPGSAPGSTGEGATPSATAPPGLSLPKAGGVGRSGPPKPHPLDFEGKLYDDLVGILDAPPPAPLNAVRGLVRMGSLEAVMRFLVREDDGEEYGTDDDESVSLSGGGGT---GRTRRKPDGRSSGPHYFRLKQRHACLGAVALHGLAVLAGPHPAIMTGPTLRYLCYSIQIAYIDLTVGTLAPGVDYPLMFRSIQLACRALAFLATSGATGAPPLGDGQRENVTVDVGRGQAEDAQDSSSVIVDHGPLRRVADSLLSTTAINEVACLAQMPSRAAWAGDEGHMYRHLERTVSSAAILVAGVCPVPAGERDPFTRFDEPEDESLSLQLCQPLMERLVTTVGGSLCSTLMVAESLEIIAHACRALAKLSDANTTVQMLLDTHDVMKAVIRLGPRAPAVLPVAAHSEREEARRGGSFSPSRSARSNHGEGRLLP-ASPEPPKSTINPGGEQAQTTATETRESSVASEGGENKPRRRGDRV-------------GRKGFGGCSDGHSAPQPPCSGYGVREGEMADASTRKLCSLPFDYFRLVANIARVPSGRAVVQSSGTLKRCLERLALDVSGCPAARLATLRCRSEICVLIGRMAGTYDRKTGAANEFILHPRYQTLTVLLGMLATPAEHRRLFGATRVHIELARHNAAYALGAICTDTVRSVPMVADAGGIHLACSVANDVNSPMPLLKQVLRILHGAGSFPDGVYASLIAEPPVLRSLNRIANNAYPGFRPETTSGRDSRPTSSASARKGAQTAPAMK---PRGDGAGG--KVDARERMPVNSMPSFLKPRSAESRLISDLATEVAYLVGARANKCGSPRIPASPPGPEESAMAGQHQKARFLAPKDTAEATEARLETGQKRVEAEGNHLSLTNPAAAVESGGGHARIGKTSHSLSTSTTPADK---AVSGKPGTYSGCGVTSCKGLGFTGEHGDIAGNTPHAAFVVRNDDRGKRGGESEAYGTAKKQTPVVHLGSDNAGAQVHNS----SRGSIAEAEPGAESIAEEXXXXXXXXXXXXPGVVTATPLALLSAREASFRDELIHRKEHYSLGGTRKKGVGQGKEEGGGSLQ---ALATVER--PGGMPEAGKRGRSIEASRRSQSSNRKLRGRSPAPVDIVQSPLIASTRPTGFPPGSECR-PGPERDKADRGCRHGVDRQEPVKTALSFGTKCA-PGGKEFVTFARPAAHWSVTNSLSASPGRTRSKGVRIPNSTEAGGVG-VVGRFASRGYLLDPTFQDHNPVILHPRLPLIGGGAGRGFSQVPDGSTLAELVTSPAAK-----GGA-KGTEPYRNSVEVLRHRVGVSGERKAGKQ 1810 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig57.14082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig57.14082.1 >prot_L-elsbetiae_contig57.14082.1 ID=prot_L-elsbetiae_contig57.14082.1|Name=mRNA_L-elsbetiae_contig57.14082.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1826bp VRVCPTFTRSKPSSKMNTDTLDAGVARSQAREAREASRAGHDAPSYHLGDback to top mRNA from alignment at L-elsbetiae_contig57:44533..55370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig57.14082.1 ID=mRNA_L-elsbetiae_contig57.14082.1|Name=mRNA_L-elsbetiae_contig57.14082.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10838bp|location=Sequence derived from alignment at L-elsbetiae_contig57:44533..55370- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig57:44533..55370- >mRNA_L-elsbetiae_contig57.14082.1 ID=mRNA_L-elsbetiae_contig57.14082.1|Name=mRNA_L-elsbetiae_contig57.14082.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=10956bp|location=Sequence derived from alignment at L-elsbetiae_contig57:44533..55370- (Laminarionema elsbetiae ELsaHSoW15)back to top |