Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | RAI1-like |
Ec32 ortholog | Ec-08_004300.1 |
Exons | 3 |
Model size | 923 |
Cds size | 603 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816607.0559568-UTR-L-elsbetiae_contig5692:2575..2743 | 1622816607.0559568-UTR-L-elsbetiae_contig5692:2575..2743 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5692 2576..2743 + |
1691683680.7984402-UTR-L-elsbetiae_contig5692:2575..2743 | 1691683680.7984402-UTR-L-elsbetiae_contig5692:2575..2743 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5692 2576..2743 + |
1622816607.0697207-UTR-L-elsbetiae_contig5692:3844..3996 | 1622816607.0697207-UTR-L-elsbetiae_contig5692:3844..3996 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5692 3845..3996 + |
1691683680.8091662-UTR-L-elsbetiae_contig5692:3844..3996 | 1691683680.8091662-UTR-L-elsbetiae_contig5692:3844..3996 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5692 3845..3996 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816607.084391-CDS-L-elsbetiae_contig5692:3996..4529 | 1622816607.084391-CDS-L-elsbetiae_contig5692:3996..4529 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5692 3997..4529 + |
1691683680.819529-CDS-L-elsbetiae_contig5692:3996..4529 | 1691683680.819529-CDS-L-elsbetiae_contig5692:3996..4529 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5692 3997..4529 + |
1622816607.0970206-CDS-L-elsbetiae_contig5692:4945..5015 | 1622816607.0970206-CDS-L-elsbetiae_contig5692:4945..5015 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5692 4946..5015 + |
1691683680.829253-CDS-L-elsbetiae_contig5692:4945..5015 | 1691683680.829253-CDS-L-elsbetiae_contig5692:4945..5015 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5692 4946..5015 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5692.14063.1 >prot_L-elsbetiae_contig5692.14063.1 ID=prot_L-elsbetiae_contig5692.14063.1|Name=mRNA_L-elsbetiae_contig5692.14063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=201bp
MSSNKSMTPKKRKAPPPSTGHSSGDTNSNSSGGGGGGGTPGTPGTARKKS SSSSSSSSGGGGGGGGTPGTAKKRGSSSSGGGSGGGGTPGTPGTARKKGS SSSGGGGGGGGAPPPSKRRSPAPSPSLTSKGPTIRIKPPAPPGGSSVLQR EKKKKKKETLEEKKESQKALDRIKFRQRMPKVLLHEVAAQKYATFLAESK S back to topmRNA from alignment at L-elsbetiae_contig5692:2576..5015+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5692.14063.1 ID=mRNA_L-elsbetiae_contig5692.14063.1|Name=mRNA_L-elsbetiae_contig5692.14063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2440bp|location=Sequence derived from alignment at L-elsbetiae_contig5692:2576..5015+ (Laminarionema elsbetiae ELsaHSoW15) GTGGGCACTGTGCAACCACTTGTGACAAGTGATTCACGGTTACTCTCTCA
AAACGCTTGGGCAACGTCATCTAGCAAGTGCTTTCTCGTGTATGTAAGGC
GGAGAATTCGAAAAACTGCATTTTCACCGACGGGGTGCCTCTGGGCTGCG
CGAGTGTCAACACCACAGGTACTCTTATGTATTACATCTTGGAGTAGTGA
TAGGTTATAGTGAGCTTGATTTATTCTCTAGACTCCACGGCAAAATTGAG
GTGGCTGTTTTTCCCAACTGGTACAACCGAGTGACATCCGTTTGATTCAA
ACCTCCAAATGGCAAAATAGTGTCATTCATCTGGAATCTACGATACCAAA
AATAGATACATCCGGTACTCCTAGATATGTACACATAGATACAACCTGAT
ACGCTCGACGCCCAGGCTATTCCATATTTCATAGTTTCTCTTCTCTCCGG
AGCTGCTGTGTCTACATTTGTACGTGGGCAGCAGTCTTTCACGCGTGCTT
CTTTCCCAGCCATTGCAAATGGCGTGTACGTCTCATCCACGGTAGGTATA
CCGTCCGTAGGTGACACAAGATACCACACCCCCTGGACCGAGTTTTAGAG
CTCCATTACTCCGTAACGAAGAAGGTTCCAGCACCAAACGGCATATTTTG
GATAGCTCCCCACTAGATCTTTCCAACGCCACCTCTTGCGGCACTGTTAC
TCTTCTTGCTGGGGAGGAATCGGGCTTGGAAAATCTGTCCAGGGGGTGTG
GTATCTTGTGTCACCTACGGTATGTAGCACGCACCACTACTATGGTTGGC
TGTTCCACAGAAAAATGGCTGTTCACGTACGAAGATACACATAGACTACA
TACTACATATATACCTGGACTAAAAGCAAGGTACACACTGTCGCCAAAAT
AAATGGGAAGGACACACACACACACACACACCTACACCTACACACCTACA
CCTACATAAATACGAATCATGTGTCTATTTCTGCGCGGAGTGGCTCTCTC
CTACAGCTTCTCGGCCGACGGGCGCAGATAGTGCTGAGAGGCTGGTCGGG
CGTTCATGTGTATTCTTGTTCTCCCCCCCCCACCCCCGTGGGTGTTCAAA
TAGAAATCAGTGAATCAAAAATAGAACCTAGCCCGCATTAGAGAGGCCGG
CTTACACGATATGTAAGACCATTCTACACCATACCCCTACAACCGACTCC
GCCCGGGTCAGATACAGCATGTAGCAGTGGTCTTAAAAAACATGCAAACG
ACTCGTGATCATGCCACAGGAACCAGCTAACCCAGCCGAGGGGAGGACCA
ACAACCCCAGGGAAAACCACCGCGGCCGATTTTCCGCCGTTCCGCTGTGG
TGAGAGGGCGGGCCGAGCGTTATTGTGGTGCTGTCTCTGCTTCTGCGCCG
AGAGTGCCTCCCAGTTTCGTCATGTCGAGCAACAAGTCCATGACCCCCAA
GAAGAGGAAGGCTCCCCCCCCCTCCACCGGACACAGCAGTGGAGATACGA
ATAGCAACAGCAGCGGCGGCGGCGGCGGCGGCGGCACGCCTGGCACGCCT
GGCACCGCCCGGAAAAAAAGCTCGAGCAGCAGCAGCAGCAGCAGCGGCGG
CGGCGGCGGCGGCGGCGGCACGCCTGGCACCGCCAAGAAAAGAGGCTCGA
GCAGCAGTGGCGGCGGCAGCGGCGGTGGCGGCACGCCTGGCACCCCTGGC
ACCGCCCGGAAAAAAGGCTCGAGCAGCAGCGGCGGCGGCGGCGGCGGCGG
TGGGGCCCCTCCGCCTTCGAAGCGCAGGTCGCCAGCGCCTTCGCCGTCGC
TAACTTCGAAGGGTCCCACCATCCGGATCAAGCCTCCCGCCCCTCCCGGA
GGCTCTTCGGTTCTCCAAAGGGAGAAGAAGAAGAAGAAGAAAGAGACGCT
TGAAGAGAAGAAAGAAAGCCAGAAGGCCCTAGATCGGATCAAGTTTCGCC
AAAGGTACTTTATTATAATACGCCCTTGATTACTCGCGAGCGGGTGGGCG
GGGAGGCGGGGGCGGGCGGGAGCGGCAAACGAAACGGAGTGCCCGCGCGT
GCTGGACGGATGTATGTACGACTGATGGTCTGATGTGGCATACCTTCAAA
AGGGTCCTTTTTTTTGTCAACGCAACTTTGGTTGCAGGTGTTGCTGTGAT
TTCTGTTTTGTGTTGTTACCGCTGTTCCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGATGCTTGTGCTGCTGTTCGTCGAAACAAAGCTTTTGC
CGGTGATATTCGGCCGACGCCGCGATAATGACACCGCTTGTTGCTCTCTC
TCTCTTTATTTCTCTCTGTTACCGTCTCGCTTCCTCCCTCTCTCCCTCCT
TCTCTCTCTCTGTCTCTCAGGATGCCGAAAGTTCTTCTGCACGAGGTCGC
GGCGCAGAAGTACGCGACTTTCCTCGCCGAGTCGAAGTCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5692:2576..5015+ >mRNA_L-elsbetiae_contig5692.14063.1 ID=mRNA_L-elsbetiae_contig5692.14063.1|Name=mRNA_L-elsbetiae_contig5692.14063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1206bp|location=Sequence derived from alignment at L-elsbetiae_contig5692:2576..5015+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCGAGCAACAAGTCCATGACCCCCAAGAAGAGGAAGGCTCCCCCCCC CTCCACCGGACACAGCAGTGGAGATACGAATAGCAACAGCAGCGGCGGCG GCGGCGGCGGCGGCACGCCTGGCACGCCTGGCACCGCCCGGAAAAAAAGC TCGAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAC GCCTGGCACCGCCAAGAAAAGAGGCTCGAGCAGCAGTGGCGGCGGCAGCG GCGGTGGCGGCACGCCTGGCACCCCTGGCACCGCCCGGAAAAAAGGCTCG AGCAGCAGCGGCGGCGGCGGCGGCGGCGGTGGGGCCCCTCCGCCTTCGAA GCGCAGGTCGCCAGCGCCTTCGCCGTCGCTAACTTCGAAGGGTCCCACCA TCCGGATCAAGCCTCCCGCCCCTCCCGGAGGCTCTTCGGTTCTCCAAAGG GAGAAGAAGAAGAAGAAGAAAGAGACGCTTGAAGAGAAGAAAGAAAGCCA GAAGGCCCTAGATCGGATCAAGTTTCGCCAAAGATGTCGAGCAACAAGTC CATGACCCCCAAGAAGAGGAAGGCTCCCCCCCCCTCCACCGGACACAGCA GTGGAGATACGAATAGCAACAGCAGCGGCGGCGGCGGCGGCGGCGGCACG CCTGGCACGCCTGGCACCGCCCGGAAAAAAAGCTCGAGCAGCAGCAGCAG CAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCACGCCTGGCACCGCCAAGA AAAGAGGCTCGAGCAGCAGTGGCGGCGGCAGCGGCGGTGGCGGCACGCCT GGCACCCCTGGCACCGCCCGGAAAAAAGGCTCGAGCAGCAGCGGCGGCGG CGGCGGCGGCGGTGGGGCCCCTCCGCCTTCGAAGCGCAGGTCGCCAGCGC CTTCGCCGTCGCTAACTTCGAAGGGTCCCACCATCCGGATCAAGCCTCCC GCCCCTCCCGGAGGCTCTTCGGTTCTCCAAAGGGAGAAGAAGAAGAAGAA GAAAGAGACGCTTGAAGAGAAGAAAGAAAGCCAGAAGGCCCTAGATCGGA TCAAGTTTCGCCAAAGGATGCCGAAAGTTCTTCTGCACGAGGTCGCGGCG CAGAAGTACGCGACTTTCCTCGCCGAGTCGAAGTCCGATGCCGAAAGTTC TTCTGCACGAGGTCGCGGCGCAGAAGTACGCGACTTTCCTCGCCGAGTCG AAGTCC back to top
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