mRNA_L-elsbetiae_contig5684.14052.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.510e-96 Identity = 276/931 (29.65%), Postives = 428/931 (45.97%), Query Frame = 2 Query: 80 PKETAARLLKLKSLSTMDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCAGKSSVVKSLMAGEPRLVDPSERTRGVDVHVENSFKPDNSNPVELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEK-AVRQLRKAVADHLAAKARQHESSWKISRKE---EEMPAPATLKIVDKIHSVSCMPGGASSEM-GSWPEFGEYLAKLAA--ESTMEDLLEPSTTSSAAAQRGEGRLFPSVGQTIPTIWGRAGALMEALRDGTDRDTAFRLLSTPSVVNPPVR--YLSWEEAVRVWGDVVATSEFSKEI-GSGGPTVDL------EDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLWRDVEGINQEVVFARLLETLRKHGVLFSKLGTSLAYAAGSNDVESSAWLF-VPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSYVPPGIMGMLMARLLDDD-----DIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAE----IEVNVVGPTFTNELKTKAGRMEAEIKSLMQDNFPGIRFYLAGGKAH--LIEGKDVSIERIDTLEAHLDVRLD-KIEGKLDEVAACSRESLMYVRILL-----------QEDFPYP-----HLVVVREHTPGRGHTTPSSGKTAGRRRKKLALGKAL----------------FLPFR----------------------------TRVRKGVK-KEMRLQFLCPYDFSLVPCGPDGDGYPFEENRDWVKRLFPAVQVTAAIAKVALKTVSGMDLPVSEF---LNALKGGIGEDLADRVL 2593 P TA RL + LS +D + NPW+ PP ++ G + +V ++E + +SG + +LK VLVG V AGK+++ + L+ G+ P RTRG+DVH++ + PD P+E++ WDFAGHDDYHSTH +FLTDGAL LLVVDL F D RG ++IWLD+LLC PG+ V +VATH D +D + A+ L+ AV +HL K + ++ ++ +E + PA + + + P S + G G L L+ E E EP+ +FPSV + +P IW R A+M+AL G D D+A RL + + +++ E+A VW S E G G + L + A+ L+ G L GL+HL+P+WIN LLR +LDHRL DP E ++W +Q++ + N + +L H+ F TG LT +L FLWRDV E VFARL+ET+ H +F E + F VP RL + K+ ++ + +R Q I YVPP I+ + D+ ++ F W+RG++F+ G E ++ + G A IE+N+ GP + K ++ +K L+++ +PG+ F AH G + + ++ L+ L +LD ++E L E + + V + Q D + H VV R R + ++ G + + +L LP R ++ +GV +++RL FLCP D SL CGPDG GY E W K+ P ++ A+A +A+K +G+ +P ++ L GG+ + + L Sbjct: 133 PGATAERLKAMPELS-VDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPP-RTRGIDVHIQ-PWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKF--DRDVLSRGGGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPA-------------VFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRG---IPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVDEKVFARLVETMTAHDAMFP---------CNDGVTEGNVREFMVPARLPDGVTGDSFAKLED-AMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLV----------RVGEVSARPLPMIEINIAGPDVNDVFKV-GFEIKKNVKDLLREAYPGLAF---DSSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFKGQSLSVNEAVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEAL 1018
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 321 bits (823), Expect = 3.170e-88 Identity = 220/662 (33.23%), Postives = 333/662 (50.30%), Query Frame = 2 Query: 80 PKETAARLLKLKSLSTMDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSW-TLKTVLVGGVCAGKSSVVKSLMAGEPRLVDPSERTRGVDVHVENSFKPDNSNPVELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEKA-VRQLRKAVADHLAAKARQHESSWKISRKEEEMPAPATLKIVDKIHSVSCMPGGASSEMGSWPEFGEYLAKLAAESTMEDLLEPSTTSSAAAQRGEGRLFPSVGQTIPTIWGRAGALMEALRDGTDRDTAFRLLSTPSVVNPPVR--YLSWEEAVRVWGDVVATSEFSKEIGSGGPTVD---------LEDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLWRDVEGINQEVVFARLLETLRKHGVLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSYVPPGIMGMLMARLLDDD-----DIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQDNFPGIRF 2011 P+ TA L + N W+ PP ++ G ++ +YE + +SG +LK VLVG V AGK+++ + L+ G+ V P RTRGVDVH+ N + P+ VE+V WDFAGHDDY+STH LFLT G+L +LVVDL FV DPS +G D +++WLD+LLC PG+VV +VATH D ++ + A + +L A+ DHL K + +++ + + K ++ P + S + P ++ + ++ L + ++EDL A E LFP + QT+P W R A+M+ALR+G D A RL + V + +++ E A W V E E+ + GP + A+ L+ G L GL+HL+ WINELLR +LDHRL DP +A +W EQ++ + H+ V +L +H+ F TG LT YL FLWR+V+ + E VF RL++T+ H +F N V VP RL L ++ ++ Q +R Q I YVPPGI+ + L D D FH +W RG++FM AG E+++ L ++ +EVN+ G + T G ++ L++ +PG+ F Sbjct: 126 PRATAETFNAKPWLRDIKLELNRWKNPPWQVIQGGWYQVISFYEGLAQSGGVAVVPSLKVVLVGAVHAGKTTLTRGLLDGKLAKVPPP-RTRGVDVHI-NPWTPNFDPAVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSSTG--DTVYVWLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASG--STTGYPADHAAAPPPTLQLCGFI--LGSGRSLEDLSVLGRKIWEIAN--EASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREAAFEAWWGV--DGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRG---VKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMFP---------CEKNGVLEEGEFMVPARLPASVACASLAELEN-AVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLGET------CAPSQRVVEVNIAGGAEKDVYATGFGIKNLVVR-LLEQRYPGLDF 755
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE) HSP 1 Score: 293 bits (749), Expect = 1.290e-80 Identity = 227/749 (30.31%), Postives = 344/749 (45.93%), Query Frame = 2 Query: 80 PKETAARLLKLKSLSTMDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSW-TLKTVLVGGVCAGKSSVVKSLMAGEPRLVDPSERTRGVDVHVENSFKPDNSNPVELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEKA-VRQLRKAVADHLAAKARQHESSWKISRKEEEMPAPATLKIVDKIHSVSCMPGGASSEMGSWPEFGEYLAKLAAESTMEDLLEPSTTSSAAAQRGEGR--------------------LFPSVGQTIPTIWGRAGALMEALRDGTDRDTAFRLLSTPSVVNPPVR--YLSWEEAVRVWGDVVATSEFSKEIGSGGPTVD---------LEDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRLQDPGEADF-----------WEEQMEKFLHNGAMMEVDDYQLSNVHQT---------------FCATGTLTVGYLYFLWRDVEGINQEVVFARLLETLRKHGVLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSYVPPGIMGMLMARLLDDD-----DIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQDNFPGIRFYLAGGKAHLIEGKDVSIERIDTLEAHLDVRLDKIEGKLDEV 2134 PK TA L + N W +PP ++ G ++ +YE + +SG+ +LK V VG V AGK+++ + L+ G+ + P RTRGVDVHV N + P+ PVE+V WDFAGHDDY+STH LFLT G+L +LVVDL FV DPS +G D +++WLD+LLC PG+VV +VAT+ D ++ + A + +L A+ +HL K + +++ + + ++ P C P + S G Y A AA P T G GR LFP + Q IP W R A+M+ALR+G D A RL + V + +++ EEA W A E E+ + GP + A+ L+ G L GL+HL+ WINELLR +LDHRL DP +A F W EQ+ + ++ +L +H+ F TG +T YL FLWR+V+ + + VF RL++T+ H +F N + VP RL L ++ ++ Q +R Q I YVPPGI+ + L D + FH +W RG++FM AG ++++ L + + +EVN+ G + T ++ I L++ +PG+ F L++GK+ E L L ++++E L+ V Sbjct: 21 PKATAETFNAKPWLRDIKLELNRWNKPPWQVIQGGWYQVISFYEGLAQSGAVAVVPSLKVVFVGAVHAGKTTLTRGLLDGKLAKLPPP-RTRGVDVHV-NPWTPNFDPPVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSSTG--DTVYVWLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRMEWQTAQRQAENTKQTPQDR------------CGPPASGSTTG-------YPADHAA-------APPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEESLFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREEAFEAWWG--ADGESVAELKAKGPDSQHLNQDSQRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLF---NRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFP---------CDKNGIHQEGEFMVPARLPASVPCASLAELEK-AISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCVPSQRV------VEVNIAGDAEKDVYDTGFA-IKKLIVRLLEKRYPGLDFDPEANPT-LMKGKEAWQETRAALRGDL---VEELERNLEAV 713
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 224 bits (570), Expect = 6.550e-56 Identity = 240/924 (25.97%), Postives = 396/924 (42.86%), Query Frame = 2 Query: 143 NPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCAGKSSVVKSLMAGEPRLVDPSERTRGVDVHVENSFKPDNSNPVELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGD------AIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEKAVRQL---------RKAVADHLAAKARQHESSWKISRKEEE--MPAPATLKI-VDKIHSVSCM-PGGASSEMGSWPEF--GEYLAKLAAESTMEDLLEPSTTSSAAAQRGEGRLFPSVGQTIPTIWGRAGALMEALRDGTDRDTAFRLLSTPSVVNPPVRYLSWEEAV-----RVWGDVVATSEFSKEIGSGGPTVDLEDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRL--QDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLW--RDVEGINQEV-----VFARLLETLRKHGVLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSYVPPGIMGMLMARLLDDDDIEFHFAWSRG--LSFMMAGSEVILFLNAPKMDDGKAGNAK---AEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQDN---FPGIRFYLAGGKAHLIEGKDVSIERIDTLEAHLDVRLDKIEG-------------KLDEVAACSRESLMYVRILLQEDF--------PYPHLVVVREHTPGRGHTTPSSGKTAGRRRKKLALGKALFLPFRTRVRKGVKKEMRLQFLCPYDFSLVPCGPDGDGYPFEENRDWVKRLFPAVQVTAAIAKVALKTVSGMDLPVSEFLNALKGGIGEDLADRV------LDEDTLDRVVLGKETAD-SGMQDTSKSAYAALTKFMKE 2701 NPW +PP ++ +G E + ++E ++R G KS LK VLVG AGK+++V+ + R V P R V + + +KP + P+++ WDFAG DY+S+H LFLT GALFLLVVDL F + GSG + I+ WL+ L PGA V +V +H D+M E D +A L R V L + + SR++ + A +T + VD + M P SS + P G A +++ +L + +++ + G FP+V QT+ W A M+ L+ GT P V+ W AV ++ G + K + + E + L + + + + +LHLDP+W+ EL+R + DH L +D + E+ + + + L ++H +C +G L YL FLW R +EG V F ++ T+ + V+++ + D ++ L VP RLQ Y ++ +++ + L ++ Q Y PPGI+G +A ++ W G S+ + +FL ++++ A + + + GP + + ++SL+ D+ +PG+ G + +++ + L + LD L+E R+ V LL++D YP LV+VR T + AG R AL + F F R+ FLC +D S VPCGP G G+P + +DWVK+ P +QV+ + +VA+ VS +DLP+++ L A G +L + V + L G A+ G +D +Y L KFM++ Sbjct: 248 NPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTG---RSV-PKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEI-GSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQM-ESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLK-GT----------APCVL--------WSRAVEEFRRKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAP---LFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYT-----------ARDADN---LVVPARLQEYGDQRIPDRLTNMVL------KIECSFGQVYPPPGIVGRFLAWSAQQV-ADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPP--PQAAEVLEELRKSLESLVSDSAYGYPGLV-----GPMYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETV---RKLGGIVTQLLEQDLLPASDEQSAYPRLVLVRPELETAEDMTHERIQRAGWDRWTKALSEMGFHKF------------RVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVGKVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRD 1100
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 204 bits (518), Expect = 5.170e-50 Identity = 237/906 (26.16%), Postives = 375/906 (41.39%), Query Frame = 2 Query: 128 MDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCAGKSSVVKSLMAGEPRLVDPS--ERTRGVDVH-VENSFKPDNSNP-----VELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEKAV-------------RQLRKAVADHLAAKARQHESSWKISRKEEEMPAPATLKIVDKIHSVSCMPGGASSEMGSWPEFGEYLAKLAAESTMEDLLEPSTTSSAAAQRGEGRLFPSVGQTIPTIWGRAGALMEALRDGT-------DRDTAFRLLSTPSVVNPPVRYLSWEEAVRVWGDVVATSEFSKEIGSGGPTVDLEDAIGLKMKEGMFLL---------------ENGLLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLW--RDVEGINQEVVFARLLETLRKH--GVLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSYVPPGIMGMLMARLLDDDDIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQD---NFPGIRFYLAGG-------KAHLIEGKDVSI-----ERIDTLEAHLDVRLDKIEG----------------------KLDEVAACSRESLMYVRILLQEDFPYPHLVVVREHTPGRGHTTPSSGKTAGRRRKKLALGKALFLPFRTRVRKG-VKKEMRLQFLCPYDFSLVPCGPDGDGYPFEEN--RDWVKRLFPAVQVTAAIAKVALKTVSGMD-LPVSEFLNALKGGIGEDLA 2581 + T NPW +PP ++ GL + + +E G S LK VLVG AGK+SV L P PS ERT GV++ + P N+ +++ WDFAG Y+ TH +FLT GALF+LVVD+ + +D G R DA+ WLD L PG+VV ++ TH+D + K V + K + D A A + + + +R+ E P + +V ++ +++ P G + E E++ + A +G FPSV +P A A +EA+R G + R L+ + V ++ + EA+ + +V + G V L AI L +G LL E+ ++H++P W +L+R I+D RL DP +A +E++ + V D LS H F G L Y+ FLW RD+E A LE + ++ S L + N+ +P + + +KL ++ + R+L F S VPPG++ L+A D+ W RG+ F V+L+ + AG +A IE + +G + + E+ L+ D FPG+ + GG A +EG E+I+ L +LD I G +LD +AA + E L+ + ++D P P L++V E P S ++ ++ + + LFL KG + R++FLC YD S CG DG GY E + W+++ P +QV +V + VS D LPV + + L+ GE+ A Sbjct: 8 VSTGNNPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRLGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSED--GHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAAADRGHAGVQDNRRYE----PLRVVVVKELLALNLSPSGGVTTA----ELREHIEGV------------------AYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLA-AIKLHEVQGAILLTRADGGGEMEDMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQAR--QEKVADLIKRQPPASVGD--LSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLPDHVGCDMDPKKLMELEVGGA--IFSRRLEFVGAHS-VPPGLIPRLLAWCGQGDE-RITACWKRGVCFSFKEHLVLLY------EHRDAG--RAVIECHAMGSAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLL---VSAEKDIPCPRLIMVSEDD------VPESDQSRLSHFRREMMDQ-LFLG------KGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVMGKLREVAGEEAA 852
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 202 bits (513), Expect = 5.780e-49 Identity = 256/1033 (24.78%), Postives = 431/1033 (41.72%), Query Frame = 2 Query: 71 DVFPKETAARLLKLKSLSTMDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCAGKSSVVKSL--MAGEPRLVDPSERTRGVDVH-VENSFKPDNSNP-----VELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEKAVRQLRKAVADHLAAKARQHESSWKISRK-----EEEMPAPATLKIVDKIHSVSCMPGGASSEMGSWPEFGEYLAKLAAESTMEDLLEPSTTSSAAAQRGEGRLFPSVGQTIPTIWGRAGALMEALRDGT-------DRDTAFRLLSTPSVVNPPVRYLSWEEAVRVWGDVVATSEFSKEIGSGGPTVDLEDAIGLKMKEGMFLLENG-----------------LLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLW--RDVE-GINQEVVFARLLETLRKHGVLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFE-KEKLKKISGVSLH-QVSRRQLRFCITQSYVPPGIMGMLMARLLDDDDIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQD---NFPGIRFYLAGGKAHLIEGKDVSIERI-----DTLEAHLDVRLDKI-------------------------------------EGKLDEVAACSRESLMYVRILLQEDFPYPHLVVVREHTPGRGHTTPSSGKTAGRRRKKLALGKALFLPFRTRVRKGVKKEM-RLQFLCPYDFSLVPCGPDGDGYPFEEN--RDWVKRLFPAVQVTAAIAKVALKTVSGMD-LPVSEFLNALKGGIGEDLADRVLDEDTLDRVVLGKETAD--SGMQDTSKSAYAALTKFM--KENDYVDFKDEMQLVPDTVGHS------GMVWVSNGNVQGWKNSRSMAPSA*KTAAS*PSGKI 2866 DVFP+ A R ++++S T NPW +PP ++ G+ R+ + + G S LK VLVG AGK+SV L +A L ERT GV++ ++ + P N +++ WDFAG Y+ TH +FLT GALF+LVVD+ + +D G R DA+ WLD L PG+VV +V TH+D D K R A + + ES+ R+ + P + +VD++ +++ P G G A+L ++ E A +G FPSV +P A A +EA+R G D R L + + ++ + EA+ ++ +V + G L AI L ++G L+ ++H++P W +L+R I+D RL DP + +E++ + + + V + LS H F G ++ Y+ FLW RD+E G + A E + + + + + LA + VP L + KK+ G+ + + R+L+ Q VPPG++ L+A D W RG+ F ++L K +AG ++ IE + +G + + AE++ L+ D FPGI + GG H ++++ L+ H++V ++ KLD +AA + + L+ + +++D P P L++V E +P S + ++ + K L R +G + R++FLC YD + CG DG GY E ++W+K P ++V+ + +V + V+ D LPV + L+ GE+ A + + D R G++ D + + +AYA L K++ +E+ D D+ Q +TVG G W+ + W+ S + P+ A SG + Sbjct: 163 DVFPRAVAERFA-VQNVSIY-TAENPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSED--GHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSG-----------GVTTAQL------QEHFE-----GVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKL-DEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLA-AITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQ----QEKLAEVIKRQSPASVAE--LSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEE--TITTMVESLLAVRFMFRVRHNKDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQP-VPPGLIPRLLA-WCSQGDARITTCWKRGVCFAFNRKHLVLLYEHRK----EAG--RSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLL---VSVEKDIPCPRLIMVLEDV------SPGSALSRLSHFRRDMVDKLL-----RREGEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEEAAGILGEIDLEGRRSSGQDLVDKVNAQEQVFGTAYAELAKWVQQREDKIGDGGDDAQTAGNTVGGGAADGGRGCRWLCSW----WRRSHNNTPAQPPDAGCAMSGNV 1133
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: A0A6H5KSY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY4_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.180e-43 Identity = 106/250 (42.40%), Postives = 148/250 (59.20%), Query Frame = 2 Query: 2111 IEGKLDEVAACSRESLMYVRILLQEDFPYPHLVVVREHTPGRGHTTPSSGKTAGRRRKKLALGKALFLPFRTRVRKGV-KKEMRLQFLCPYDFSLVPCGPDGDGYPFEENRDWVKRLFPAVQVTAAIAKVALKTVSGMDLPVSEFLNALKGGIGEDLADRVLDEDTLDRVVLGKETADSGMQDTSKSAYAALTKFMKEND------------YVDFKDEMQLVPDTVGHSGMVWVSNGNVQGWKNSRSMA 2821 ++G LD+V S+ESLM ++ L ++ YP LV+V+E G SS T +R FLP + R GV KK+M L FLCP D + VPCG G+GY F+E RDWVK++ P +QV AKVAL +G+++ +S+FL +K G+ E+L DR LDED L R VLG+++ + MQ ++++Y AL FM+ + Y+DF++EM+ V T G GMVWV N NVQ W SRS A Sbjct: 287 MQGSLDKVLESSQESLMRLKDLQALNYRYPRLVIVKE----AGICGRSSKATGWKR----------FLPNKFR---GVGKKDMALHFLCPVDMTKVPCGYGGEGYRFQETRDWVKKISPVLQVAVVTAKVALNATTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVLGEDSIGADMQRDTRASYEALKVFMENEERRRRKNARDGDGYIDFREEMKRV--TNGRGGMVWVRNDNVQKWLESRSTA 517
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 182 bits (462), Expect = 8.350e-43 Identity = 240/950 (25.26%), Postives = 377/950 (39.68%), Query Frame = 2 Query: 62 NNFDVFPKETAARLLKLKSLSTMDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCAGKSSVVKSLMAGEPRLVD----PSERTRGVDVH-VENSFKPDN--SNP---VELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDEEKAVRQLRKAVADHLAAKARQHESSWKISRKEEEMPAPATLKIVDKIHSVSCMPGGASSEMGSWPEFGEYLAKLAAESTMEDLLEPSTTSSAA-------------AQRG-EGRLFPSVGQTIPTIWGRAGALMEALRDGTD-------RDTAFRLLSTPSVVNPPVR--YLSWEEAV-------------------------RVWGDVVATSEFSKEI------GSGGPTVDLEDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLW---RDVEGINQEVVFARLLETLRKHGVLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFEKEKLKKISGVSLHQVSRRQLRF----------CITQSYVPPGIMGMLMARLLDDDDIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNE-LKTKAGRMEAEIKSLMQDN---FPGIRFYLAGGKAHLIEGKDVSIERIDTLEAHLDVRLDKIEGKLDEVAACSRESLMYVRILLQEDFPYPHLVVVREHTPGRGHTTPSSGKT----AGRRRKKLALGKALFLPFRTRVRKGVKKEMRLQFLCPYDFSLVPCGPDGDGYPFEENRDWVKRLFPAVQVTAAIAKVALKTVSGMDLPVSEF---LNALKGGIGEDLADRVLDEDTLDRVVLGKETADSG 2647 N DVFP+ A T+ T NPW++PP ++ G+ + ++ G S LK VLVG AGK+S+ L E RL P ERT GV++ ++ P N S P +++ WDFAG Y+ TH +FLT GALF+LVVD+ + + G R DA+ WL+ L PG+VV +V THTD E+ E K + + + R S K D++ + + G ++++ P + L E+LL TSS A G +G FPSV +P + A A +EA+R G D R+ + L +P R ++ + EAV R++ V + E I G GG IG ++ H++P+ +L+R ++D RL DP + EE ME M+ L++ H+ F G ++ YL FLW D+ +QE + E ++ S L Y V FVP R Y L +G+++ +L+ + VPPG++ L+A + W RG+ F V+L+ + +A + + IE + G ++ +T + ++ L+ D+ FPG+ +G + D + + LE +DV D++ K + R+ + ++R +P P LV V R ++ + R GK F TR ++R+ FLCPYD SL CGP G GY E W K+ P +V A+A +AL+ G+ +P +F L + GG A+ L+ + E D G Sbjct: 296 NKLDVFPRLVAEGFAARNV--TVGTENNPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRL---EDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTE---GQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAK-----------------DRVETE--LGEGHTTDLKGNPRYQPLRVVL-----KEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEG---DPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLII-----HVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPML----LTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEA-DVEVMVGSLLDVRFMYR-----VRDGQHAFVPDR---YVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLA-WCGRGEGRIKACWKRGVCFAFKNHLVLLY-------EVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLVRSGESEETVISSDSDHKAL--LERIVDVLRDQMNVKF-MMDRSMRQDVAFLR------WPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATR-------KLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGG 1168
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE) HSP 1 Score: 169 bits (428), Expect = 4.700e-39 Identity = 177/612 (28.92%), Postives = 277/612 (45.26%), Query Frame = 2 Query: 1094 LSWEEAVRVWGDVVATSEFSK-EIGSGGPTVDLEDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLWRDVEGINQEVVFARLLETLRKHG----VLFSKLGTSLAYAAGSNDVESSAWLFVPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSY---VPPGIMGMLMARLLDDDDIEFHFAWSRGL----SFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQDNFPGI------RFYLAGGKAHLI-----EGKDVSIERIDTLEAHLDVRLDKIEGKLDEVAACSRESLMYVRILLQEDFPYPHLVVVRE-HTPG-RGHTTPSSGKTAGRRRKKLALGKALFLPFRTRVRKGVKKEMRLQFLCPYDFSLVPCGPDGDGYPFEENRDWVKRLFPAVQVTAAIAKVALKTVSGMDLPVSEFLNALKGGIGEDLADRVLDEDTLDRVVLGKETADSGMQDTSKSAYAALTKFM----------KEND-YVDFKDEMQLVPDTVGHSGMVWVSNGNVQGWKNSRSMA 2821 ++ EE W + V E +K +I P LE A+ ++ +G + + LD W+ +L+ +L+H+ ++ +NG++ +L + T C T L W ++G + ++ RL + + G VL + L L ++ G+N + L +RL+ + ++ V S+ F + + VPPG + ++ R + W G+ SF G +F A ++ +GN E+ V G + + ++ ++ + FPG+ R GG L G+DV + I L +IEG + +ESLM ++ L ++PYPHLVVV+E T G RG T + G +A+ K+M L FL P D S VPCG DG+GY F E R WVK+L P +QV AKVALK +G+D+ +SEFL A+K G E++AD LDE+ L RVV G+E A + +Q ++ +Y AL KFM KE D Y+DF+++MQ D G G+VWV NVQ W++S S A Sbjct: 399 ITMEELKAKWNETVR--ELAKRDIAVTNPENALEGALSIREFDGSLVRHEMFVFLDVVWLARVLKPLLNHKDEES--------------YNGSV------KLGDTGDT-CIT--LRDPLDIASWGRLKG--EGILEPRLAQAMWPAGLSEYVLPTLLSLGLGFSLGNNP---AGGLVALLRLRS----GRPARVGKVMDTFRSKNTAVFAASWKFFLGVPPGAIEKVLTRCCSIGGVRAF--WRFGVLVHGSFGDGGGSSGIF--AVVLEYSSSGN---ELTAQVYGDASNPAPWVALSYVISAVRVMLLE-FPGLHSKGSLRCPQHGGAMPLTTTPGSNGEDVLAQMIRIL--------GRIEGGI-------QESLMCLKNLQGPNYPYPHLVVVKEIETQGNRGLLTKARG---------IAM-----------------KDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATAGLDVDISEFLQAVKEGAVEEVADCTLDEEALSRVVSGEEVAGADLQRDTRVSYEALKKFMDKELNRRKNAKEGDGYIDFREKMQRESD--GKGGIVWVRIENVQKWRDSLSTA 925
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 166 bits (420), Expect = 5.110e-38 Identity = 257/1033 (24.88%), Postives = 407/1033 (39.40%), Query Frame = 2 Query: 74 VFPKETAARLLKLKSLSTMDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCAGKSSVVKSLMAGEPRL----VDPSERTRGVDVH---VENSFKPDNSNP---VELVFWDFAGHDDYHSTHSLFLTDGALFLLVVDLAGFVDDPSGSGRGDAIHIWLDALLCHTPGAVVKIVATHTDEMREDGDE-EKAVRQLRKAVADHLAAKARQHESSWKISRKE--------EEMPAPATLKIVDKIHSVSCMPGGASSEMGSWPEFGEYLAKLAAESTMEDLLEPSTTSSAAAQRGEGRLFPSVGQTIPTIWGRAGALMEALRDGTD-------RDTAFRLL---------------------------STPSVVNPPVRYLSW-------------------EEAVRVWGDVVATSEFSKEI------GSGGPTVDLEDAIGLKMKEGMFLLENGLLHLDPTWINELLRAILDHRLQDPGEADFWEEQMEKFLHNGAMMEVDDYQLSNVHQTFCATGTLTVGYLYFLW-RDVEGINQEVVFARLLETLRKHG--VLFSKLGTSLAYAA--GSNDVESSAWLF---VPVRLQPYFEKEKLKKISGVSLHQVSRRQLRFCITQSYVPPGIMGMLMARLLDDDDIEFHFAWSRGLSFMMAGSEVILFLNAPKMDDGKAGNAKAEIEVNVVGPTFTNELKTKAGRMEAEIKSLMQDN---FPGIRFYLAGGKAHLIEGKDVSIERIDTLEAHLDVRLDKIEGKLDEVAACSRESLMYVRILLQEDFPYPHLVVVREHTPGRG-----HTTPSSGKTAGRRRKKLALGKALFLPFRTRVRKGVK-KEMRLQFLCPYDFSLVPCGPDGDGYPFEENRDWVKRLFPAVQVTAAIAKVALKTVSGMDLPVSEF---LNALKGGI------------GEDLADRV---LDEDTLDRVVLGKETADSGMQDTSKS-----AYAALTKFMKENDYVDFKD---------EMQLVPDTVGHSGMVWVSNGNV 2791 VFP+ A S T+DT NPW++PP ++ G+ + ++ G S LK VLVG AGK+S+ L E RL +P ERT GV++ + + S P +++ WDFAG Y+ TH +FLT GALF+LVVD+ + + G DA+ WLD L PGAV+ +V THTD ++ E K + +K V + + Q +S+ ++ E E P L++V + ++ W + G +L E L A +G F SV +P + A +EA+R G D R+ + L ST S V+ L + +E R++ + + E I G G P IG ++ H++P+ +L+R ++D RL DP + E+ M M+ L++ H+ F G ++ YL FLW RD+E + Q A LE ++ S L Y G + ++ +P + P + K+ ++ S + +L + VPPG++ L+A + W RG+ F V+L+ ++ D AGN+ IE + G F +T + ++ L+ D FPG+ + G + D E + ++ +++ D++ K + ++ L ++R +P P LV V P G S K + R GK R KGV +++RL FLCPYD SL CGP G GY E W K+ P +V A+A A K +G+ +P ++F L GG GE +A LD T D ++ G G Q S AY AL + +K + + +D +M+LV + WV N+ Sbjct: 5 VFPRLVAEEFAA--SSVTVDTDNNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRL---EDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAE---GHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTL-----DLTSSDWEDIGLLQRRL------EHL---------AYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLII-----HVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPML----LTLTDQHKRFVKAGEVSKDYLKFLWLRDME-LGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKL---VGAHAVPPGLVPRLLA-WCGRGEGHIKACWKRGVCFAFKNHMVLLY----EVRD-TAGNSW--IECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGL-IRGESEEALVSSDGDHEAL--VKRIVNMLRDQMNVKF-MMDRSIKQDLAFLR------WPIPRLVCVLP-APESGAKPLEEKDRSFDKWSATLRNWCLGGK--------RKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEADFEATLGTKAGGALSTFVEDSLNSGGESMASIAGERLDGGTADELLQGVGAQRFGAQQGWPSPVQAFAYDALKEVIKRFEVANMRDRSPFPSFDVKMRLVDRGGQGAEWSWVRTKNI 969 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5684.14052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5684.14052.1 >prot_L-elsbetiae_contig5684.14052.1 ID=prot_L-elsbetiae_contig5684.14052.1|Name=mRNA_L-elsbetiae_contig5684.14052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=902bp MDTRTNPWQQPPGAIVAAGLEAIVRYYEAIERSGSRKSWTLKTVLVGGVCback to top mRNA from alignment at L-elsbetiae_contig5684:4721..11101- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5684.14052.1 ID=mRNA_L-elsbetiae_contig5684.14052.1|Name=mRNA_L-elsbetiae_contig5684.14052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6381bp|location=Sequence derived from alignment at L-elsbetiae_contig5684:4721..11101- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5684:4721..11101- >mRNA_L-elsbetiae_contig5684.14052.1 ID=mRNA_L-elsbetiae_contig5684.14052.1|Name=mRNA_L-elsbetiae_contig5684.14052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5412bp|location=Sequence derived from alignment at L-elsbetiae_contig5684:4721..11101- (Laminarionema elsbetiae ELsaHSoW15)back to top |