mRNA_L-elsbetiae_contig568.14044.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig568.14044.1
Unique NamemRNA_L-elsbetiae_contig568.14044.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: D7FKR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR8_ECTSI)

HSP 1 Score: 643 bits (1659), Expect = 7.000e-228
Identity = 328/422 (77.73%), Postives = 356/422 (84.36%), Query Frame = 3 
Query:   54 MWLEAVVTVILPISASAFSTATGRLSGCLGSEVSPRVSPQGMSRYRNGWTNRPGTLREL-SMSFGAGATDRYSWDETDKEVNVKARLPAWAKGKSVILDMTPTHIKLSLKEEGEKPIIEGDFRGAISPDGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQVDSDYPEEKKANLVLSRRSCETLYPSQRLCAPDGAQSDVPRHTGVVDEDGFCRDLLAVQSMSGAMVARQVPVNGNALFSAVAVSRWFIENGEHPVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSGETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLISTGRRFALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYPYEEVPEKNKGK 1316
            M LE ++   +P+S +AFS     +S    ++ S  V PQ MSRYR G  +RP TLR L  MSFGAGATDRYSWDETDKEVNVKARLPAWAKGKSV+LDMT TH+KL LKEE   PIIEGD RGAI  DGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQV+SDYPEE KA  + +    E         A D A+S  P+HTGVVDEDGFCRDLLAVQ+MSGAMVARQVPVNGNALFSAVA+S+WFIE+GEHP  SSPEIE +AKDLRQKTLDYLT+AYKENA IY+SGE M ARPFVAAQAKANSMADGDEYL+AMRDDTMWGGGGEVVGLTHVLKRP+HVYDL+STGRRF LRVIGRFGAPLYA E+PIHIVSTYARFPDLDPGSQ  EGNHYVALYPYE+VPEKNKGK
Sbjct:    1 MRLETLLVAFVPVSVTAFSF----VSKLRPNQFSLEVRPQVMSRYRTGRASRPRTLRPLWMMSFGAGATDRYSWDETDKEVNVKARLPAWAKGKSVVLDMTNTHVKLFLKEEESTPIIEGDLRGAILMDGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQVNSDYPEEDKAAEIAAMAHEEKK-------AQD-AESGTPKHTGVVDEDGFCRDLLAVQAMSGAMVARQVPVNGNALFSAVAISKWFIESGEHPDASSPEIETIAKDLRQKTLDYLTKAYKENAPIYMSGEYMDARPFVAAQAKANSMADGDEYLQAMRDDTMWGGGGEVVGLTHVLKRPLHVYDLVSTGRRFGLRVIGRFGAPLYAKERPIHIVSTYARFPDLDPGSQSAEGNHYVALYPYEDVPEKNKGK 410
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: D8LB24_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB24_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.630e-35
Identity = 80/209 (38.28%), Postives = 113/209 (54.07%), Query Frame = 3 
Query:  669 SDVPRHTGVVDEDGFCRDLLAVQSMSGAMVARQVPVNGNALFSAVAVSRWFIENGEHPVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSGETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLISTGRRFALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYPYEEV 1295
            S + RH+  +  DGF  D  AVQ +S  M  RQVP +GN LF A++       NG HP     E+   +  LR+  +DYL    K+   +YL  E       + +   A      + Y + MR  ++WGGG E+V L++ L RPIHVY+L S G  F  R +  FG+P +  +Q IHI+S  +RFP+L PG Q   GNH++AL+P  E 
Sbjct:   22 SSIWRHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKT--LYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPET 228
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A7S1V4T9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V4T9_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.800e-34
Identity = 79/204 (38.73%), Postives = 124/204 (60.78%), Query Frame = 3 
Query:  762 RQVPVNGNALFSAVAVSRWFIENGEH-PVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSGETMSARPFVAAQAKANSMA-----DGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLISTGRR---FALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYPYEEVPEKNKGKP*ASSQTTEF 1346
            RQVP +GN LF A++V  +  E+G H P     +++  +K LRQ+ +DY+ +  K   L++L      AR F+ A+   +S A      GDEYL+ MR D+ WGGG E+V L+++L+RPIHVY+L +  R    F LR +  FG+P +  ++ +HI+S  +RFPD+ PG Q  EGNH++A++P  + P++   +    + TT F
Sbjct:    2 RQVPGDGNCLFHALSVCLYKSEHGCHFPFGDLGKLQQCSKSLRQRAVDYVKK--KPRRLLFLQ-----AREFLRAKDLIDSSAAQYGVTGDEYLETMRQDSTWGGGPEIVALSNMLRRPIHVYELYAPNRNVQDFRLRRMCCFGSPKFDRQEALHILSADSRFPDVQPGKQKKEGNHFLAIFPQAKKPKRLHVRRGGDTDTTNF 198
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A835YZQ7_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.620e-32
Identity = 77/203 (37.93%), Postives = 112/203 (55.17%), Query Frame = 3 
Query:  681 RHTGVVDEDGFCRDLLAVQSMSGAMVARQVPVNGNALFSAVAVSRWFIENGEHPVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSGETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLIS-TGRRFALRVIGRFGAPLYAVE-QPIHIVSTYARFPDLDPGSQGGEGNHYVALYP 1283
            RH+  +  DGF  +   V+ +   M  RQVP +GN LF +++      +   HP     ++   +  LR+  +DYL  A  +  L    GET+     +   A   +M   D Y K MR   +WGGG E+V L++ L+RPIHVY+L +  GRRF  R +  FG+PL+  E +PIHI+S  ARFP+L PG Q   GNH++ L+P
Sbjct:   28 RHSAQIQRDGFLTEAFPVEGLPVQMQVRQVPGDGNCLFHSISACLEHADTSSHPSLHLNDLLPKSAVLRKMAVDYLV-ADPDRVLYLEGGETVPVNELLTVVATQYNMTV-DAYCKHMRLPAVWGGGPEIVALSNCLRRPIHVYELAAGAGRRFCFRRMACFGSPLFDGECEPIHILSADARFPNLAPGQQLANGNHFLCLFP 228
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A7S3L1U5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1U5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.660e-28
Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 3 
Query:  705 DGFCRD--------------LLAVQSMSGAMVARQVPVNGNALFSAVAVSRWFIENGEHPVTSS--PEIEAVAKDLRQKTLDYLTQAYKENALIYLSG-ETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLI--------STGRRFALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYP 1283
            DGF RD              L   Q +      RQVP +GN LF ++++      NG H   S    ++   ++ LRQ+ +D L Q +K    ++L G ET+ +   V A A+   +   +EY +AM  D +WGGG E+V L+++L+RPIHVY+L         S+G  F LR +  FG+P +   + +HI+S  +RFPDL PG Q   GNH++A++P
Sbjct:   27 DGFLRDEFRRIPGEWEEEVRLRTRQRLETKCRIRQVPGDGNCLFHSISLCLQHATNGTHWDVSKCLEDLYTHSQTLRQQAVDCLRQPHKR---LFLQGRETLKSGELVQAAAQQYGLTS-EEYCQAMEQDCVWGGGPEIVALSNLLQRPIHVYELATSSSSSKPSSGNTFVLRRMACFGSPRFDRREALHILSADSRFPDLLPGEQLSAGNHFLAVFP 240
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: B7G567_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G567_PHATC)

HSP 1 Score: 125 bits (313), Expect = 4.940e-28
Identity = 71/193 (36.79%), Postives = 118/193 (61.14%), Query Frame = 3 
Query:  762 RQVPVNGNALFSAVAVSRWFIENGEHPVTSSPE---IEAV---AKDLRQKTLDYLTQAYKENALIYLSG-ETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLISTGRR----------FALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYPYE 1289
            RQVP +GN LF ++++   +  NG H   ++ +   ++A+   ++ LR+K ++ L  + +    ++L G E++ A   V A A+  +++  +EY  +M+ D++WGGG E+V L +VL+RPIHVY+L ST  R          F LR +  FG+P +   QP+HI+S  +RFPD+ PG Q   GNH++AL+P+E
Sbjct:   94 RQVPGDGNCLFHSISLCLQYAANGTHWDLNTSDRRGLDALYEHSQTLRRKAVEVLQHSQRR---LFLQGRESLRAHELVQAAAQQYNLSP-EEYCASMQQDSVWGGGPEIVALCNVLQRPIHVYELASTTTRSSRNDDERQSFVLRRMACFGSPKFDRRQPLHILSADSRFPDVTPGQQLASGNHFLALFPHE 282
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A4D9CXM6_9STRA (OTU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXM6_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.950e-22
Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 3 
Query:  696 VDEDGFCRDLLAVQSMSGAMVARQVPVNGNALFSAVAVSRWFIENGEHPVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSGETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLISTG----RRFALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYPYEEV 1295
            + + GF  +   V      M  RQVP +G+ LF A+ V+  +  NG HP      +   A  LRQ  LDYL+       L     + M ++  +   +K   ++  ++YL  +RD   WGGG E+V L + L+RPI +Y+L   G     RF  + +   G P ++ ++ +HI+     FPD  P      GNH++AL+P E+V
Sbjct:   42 ISQGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDD-PSRLLTVTYNQDMKSQELLDMTSKEMGLS-AEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDV 243
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BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A1Z5JTL4_FISSO (OTU domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTL4_FISSO)

HSP 1 Score: 105 bits (262), Expect = 2.460e-21
Identity = 70/228 (30.70%), Postives = 116/228 (50.88%), Query Frame = 3 
Query:  687 TGVVDEDGFCRDLL--------------AVQSMSGAMVARQVPVNGNALFSAVAVSRWFIENGEH--PVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSG-ETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLI--STGRR----------FALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYP 1283
            + ++DE GF + L                V   +     RQVP +GN LF ++++      NG H        E+   ++ LR K +  L Q  ++   ++L G E+M A   V + A+   +   +EY   M +D +WGGG E+V L+++L+RPIHVY+L   S G            F L+ +  FG+P +  ++ +HI+S  +RFPD+ PG Q   GNH+++++P
Sbjct:   52 SALIDEKGFLKGLFRRKKGDWEEEFPMRTVYHTNHPCQIRQVPGDGNCLFHSLSLCLQHAVNGTHWDMPNRLDELYEHSRSLRAKAVACLRQNKRK---LFLQGKESMRAIELVTSAAQQYDLTP-EEYCATMEEDCVWGGGPEIVALSNILQRPIHVYELAMESPGAEDATDQPKKPTFILKRMACFGSPRFDGKRALHILSADSRFPDIQPGEQMVAGNHFLSVFP 275
[Close]
BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A7S3Q5V5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5V5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.900e-16
Identity = 57/177 (32.20%), Postives = 77/177 (43.50%), Query Frame = 3 
Query:  921 KENALIYLSGETMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLIS--------------------------------------------TGRRFALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGGEGNHYVALYPYEEVPEKNKGKP 1319
            K N  ++L G        +   A +     G EY   M+ + +WGGG E+VGL + LKRPIHVY+LIS                                            T   F LR +  FG+P +   +P+HI+S   RFPDL PG Q   GNH++AL+PY    +  K KP
Sbjct:  271 KSNKPLFLQGSEFLRPKELLHVASSQYGMSGQEYCDQMKHNGVWGGGPEIVGLCNYLKRPIHVYELISMKPKCKIKIRPRGYGLLGHKRSPSGEGLEDVEYSDDCSHGTTSSTKPEFRLRRMACFGSPKFDHREPLHILSADCRFPDLTPGLQASAGNHFMALFPYSSPLKIKKQKP 447
[Close]
BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Match: A0A7S2SV57_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV57_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.290e-12
Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 3 
Query:  189 RNGWTNRPGTLRELSMSFGAGATD-RYSWDETDKEVNVKARLPAWAKGKSVILDMTPTHIKLSLKEEGEK-PIIEGDFRGAISPDGSYWTMETLDDNG----KMLYLTLEKAPQLTGLGP--WMGVVQGEKQVDS 569
            R+ W   PG  R + M+ G G    RYSW E+D+E+ V+  +      + V+ ++ P H  LSLK +GE  P +EG  RG ++PDG YW+ME  ++ G    +++ L LEK    T L P  W GVVQ E + ++
Sbjct:   39 RSQWPRGPG--RWVGMASGRGEVPGRYSWTESDQELEVRVPVAGDVGPRDVVFEVKPRH--LSLKLDGEDAPRLEGPLRGKVAPDGCYWSMEVEEEGGPKEQRVITLRLEKKLG-TLLDPEDWQGVVQHEVEANA 168
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig568.14044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FKR8_ECTSI7.000e-22877.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LB24_ECTSI1.630e-3538.28OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1V4T9_9STRA3.800e-3438.73Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A835YZQ7_9STRA1.620e-3237.93OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3L1U5_9STRA3.660e-2835.32Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G567_PHATC4.940e-2836.79Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A4D9CXM6_9STRA1.950e-2231.37OTU domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A1Z5JTL4_FISSO2.460e-2130.70OTU domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S3Q5V5_9STRA1.900e-1632.20Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2SV57_9STRA6.290e-1237.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig568contigL-elsbetiae_contig568:11556..17592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score646.0
Seed ortholog evalue1.2e-182
Seed eggNOG ortholog2880.D7FKR8
Hectar predicted targeting categorychloroplast
EggNOG free text desc.OTU-like cysteine protease
EggNOG OGs2BVCW@1,2S253@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionHSP20-like chaperone
Ec32 orthologEc-21_001870.1
Exons10
Model size1660
Cds size1269
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig568.14044.1prot_L-elsbetiae_contig568.14044.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig568 11894..17539 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.097774-UTR-L-elsbetiae_contig568:11555..118931622816605.097774-UTR-L-elsbetiae_contig568:11555..11893Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig568 11556..11893 -
1691683679.3324907-UTR-L-elsbetiae_contig568:11555..118931691683679.3324907-UTR-L-elsbetiae_contig568:11555..11893Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig568 11556..11893 -
1622816605.2343993-UTR-L-elsbetiae_contig568:17539..175921622816605.2343993-UTR-L-elsbetiae_contig568:17539..17592Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig568 17540..17592 -
1691683679.4550567-UTR-L-elsbetiae_contig568:17539..175921691683679.4550567-UTR-L-elsbetiae_contig568:17539..17592Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig568 17540..17592 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.1108701-CDS-L-elsbetiae_contig568:11893..119961622816605.1108701-CDS-L-elsbetiae_contig568:11893..11996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 11894..11996 -
1691683679.3459527-CDS-L-elsbetiae_contig568:11893..119961691683679.3459527-CDS-L-elsbetiae_contig568:11893..11996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 11894..11996 -
1622816605.121342-CDS-L-elsbetiae_contig568:12150..122341622816605.121342-CDS-L-elsbetiae_contig568:12150..12234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 12151..12234 -
1691683679.355074-CDS-L-elsbetiae_contig568:12150..122341691683679.355074-CDS-L-elsbetiae_contig568:12150..12234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 12151..12234 -
1622816605.1338568-CDS-L-elsbetiae_contig568:12771..128781622816605.1338568-CDS-L-elsbetiae_contig568:12771..12878Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 12772..12878 -
1691683679.3639283-CDS-L-elsbetiae_contig568:12771..128781691683679.3639283-CDS-L-elsbetiae_contig568:12771..12878Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 12772..12878 -
1622816605.144708-CDS-L-elsbetiae_contig568:13333..134711622816605.144708-CDS-L-elsbetiae_contig568:13333..13471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 13334..13471 -
1691683679.3736682-CDS-L-elsbetiae_contig568:13333..134711691683679.3736682-CDS-L-elsbetiae_contig568:13333..13471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 13334..13471 -
1622816605.1550765-CDS-L-elsbetiae_contig568:14046..141691622816605.1550765-CDS-L-elsbetiae_contig568:14046..14169Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 14047..14169 -
1691683679.3827746-CDS-L-elsbetiae_contig568:14046..141691691683679.3827746-CDS-L-elsbetiae_contig568:14046..14169Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 14047..14169 -
1622816605.1681254-CDS-L-elsbetiae_contig568:14576..147491622816605.1681254-CDS-L-elsbetiae_contig568:14576..14749Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 14577..14749 -
1691683679.3917902-CDS-L-elsbetiae_contig568:14576..147491691683679.3917902-CDS-L-elsbetiae_contig568:14576..14749Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 14577..14749 -
1622816605.1860824-CDS-L-elsbetiae_contig568:15354..154921622816605.1860824-CDS-L-elsbetiae_contig568:15354..15492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 15355..15492 -
1691683679.4034448-CDS-L-elsbetiae_contig568:15354..154921691683679.4034448-CDS-L-elsbetiae_contig568:15354..15492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 15355..15492 -
1622816605.196853-CDS-L-elsbetiae_contig568:15615..156641622816605.196853-CDS-L-elsbetiae_contig568:15615..15664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 15616..15664 -
1691683679.4131157-CDS-L-elsbetiae_contig568:15615..156641691683679.4131157-CDS-L-elsbetiae_contig568:15615..15664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 15616..15664 -
1622816605.2107277-CDS-L-elsbetiae_contig568:15923..160591622816605.2107277-CDS-L-elsbetiae_contig568:15923..16059Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 15924..16059 -
1691683679.4247904-CDS-L-elsbetiae_contig568:15923..160591691683679.4247904-CDS-L-elsbetiae_contig568:15923..16059Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 15924..16059 -
1622816605.2221332-CDS-L-elsbetiae_contig568:17321..175391622816605.2221332-CDS-L-elsbetiae_contig568:17321..17539Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 17322..17539 -
1691683679.4376547-CDS-L-elsbetiae_contig568:17321..175391691683679.4376547-CDS-L-elsbetiae_contig568:17321..17539Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig568 17322..17539 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig568.14044.1

>prot_L-elsbetiae_contig568.14044.1 ID=prot_L-elsbetiae_contig568.14044.1|Name=mRNA_L-elsbetiae_contig568.14044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=423bp
MWLEAVVTVILPISASAFSTATGRLSGCLGSEVSPRVSPQGMSRYRNGWT
NRPGTLRELSMSFGAGATDRYSWDETDKEVNVKARLPAWAKGKSVILDMT
PTHIKLSLKEEGEKPIIEGDFRGAISPDGSYWTMETLDDNGKMLYLTLEK
APQLTGLGPWMGVVQGEKQVDSDYPEEKKANLVLSRRSCETLYPSQRLCA
PDGAQSDVPRHTGVVDEDGFCRDLLAVQSMSGAMVARQVPVNGNALFSAV
AVSRWFIENGEHPVTSSPEIEAVAKDLRQKTLDYLTQAYKENALIYLSGE
TMSARPFVAAQAKANSMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPI
HVYDLISTGRRFALRVIGRFGAPLYAVEQPIHIVSTYARFPDLDPGSQGG
EGNHYVALYPYEEVPEKNKGKP*
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mRNA from alignment at L-elsbetiae_contig568:11556..17592-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig568.14044.1 ID=mRNA_L-elsbetiae_contig568.14044.1|Name=mRNA_L-elsbetiae_contig568.14044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6037bp|location=Sequence derived from alignment at L-elsbetiae_contig568:11556..17592- (Laminarionema elsbetiae ELsaHSoW15)
CGCAAGGCTATCTAGCTGTTTTCTCCTTTGCTCTATACCTCCCGAGCGCC
ACGATGTGGTTGGAAGCTGTCGTTACAGTGATTTTGCCAATTTCGGCTTC
AGCTTTCTCTACGGCCACAGGTCGGCTTTCAGGTTGCCTTGGCAGCGAGG
TCAGTCCTCGTGTTAGCCCACAGGGAATGTCGCGATATCGGAATGGATGG
ACAAATCGACCAGGAACTTTGAGAGAGTTGTCGATGAGTTTTGGAGCTGG
AGCGACCGATCGATACTCGTGGTGAGGATTAAGAGGCTACTGCTGTGTGT
GCTGTTGTGTATTGAAATCATGTTTGCTGACAAACATGATTAAAAACCTT
CGTCCACAAAACTATCCTACAGCCGACATGTATTTTACCTGGTACAGCGG
TACAACAGCAGTAGTGTAGGAGTGTTACTACTGCTGCAAGTCTGTGAAAT
ATTCGTCTTCGAGATGCCGGTTGCCGGGTCAAAGCACGGTCAATTTCACC
ATGCGTGGGTTTTCGCGTTTTCTGGGTGATTTCGGCCGCTCAGGAAGTGG
CGGTGAGGGGGGGGGCGCACACAGAGTATGATTGACGCGTGGCATCGATT
ACCGATTACACTACATATTGTAGATAGATACAAGAAAGCAGTGGCTGATA
GTTGTTTTTCCATGAAAAAATTACCTGCTGTGGGCGATCGTTGATACTAA
ATAGCTGGTTGATACAGAGAGGGAGAACGCAGGTCTTTCGTGTTCTCACA
GTCTTGTGTGCAGAACTCTTCTGAATAGGGACCAGCAAAATTACGATTTC
CTCGCTAATTAGACACGACACTCAAAAGCGACCAGTGCACTGAAGAGCGC
TACGCGTTATCGTTCCTGCACACCCGCCACCCTCAAGATTGGTAGTCTAT
AACGGAAACGGCGGTGAAAAGATCGGTGCTTACAAACAAACGCCTGATGT
GTATGTGTATGTGTGTGTGTGCTGCCTCTCTCTTCCACAAAAACTGAGCA
AGCTCGTCGACCTGGGTATCGATCGCAAAACTAACTGCTGGAGGCGACTC
TTTTGACTTGAAGAGTACCCTCTGCCACGTTAGTTTGGCATTCAGACGTC
GCGCAGTTGCCGAACGCCGGCATCCAAAGCCAAATACACCACCTACACGC
CGACAACTCGGCGAGCTAAACACGAAACTCCAAACCGACAAGTACACTGA
GGAGTGTAGCACAGCAGTAGTATCTTTCCTGCACACTCTCCGGTTTTCAG
ATTGGTGGTCTATAGCGAAAACGGTGGCGAAAAGATCGGCGCTAACTAAG
TGACTTAACTAACGGACACGTGAAACTCAATTTGCCTCCTCCAAACTCTA
GCTCTTCGTGTGTGCAACGAGAGGGGGGTCGATATGAAATTTTTTGTGCG
AAAAAAAACGAGCGGATCGAGTTTTTTTTCGCACAAAAACTACTACAAGT
GGACACACACAAAATAATTTGTCTCCCTCGGCGGCGCAGCTTTCACACAC
CTCATCAATCGCTGAATGCCCGTTCATTCCCAGGGACGAGACGGACAAGG
AAGTTAATGTCAAGGCGCGGTTACCTGCATGGGCGAAGGGCAAATCCGTC
ATCCTCGACATGACCCCAACCCACATCAAGCTCTCCCTCAAGGAAGAGGG
GGAAAAACCCATTATCGAGGTGCAGGACGGCAGTTAACTTGAACTGGTGT
CTGTCCTTCGTGGTGTAGCCTTTCGATGAGCCCCCCCGTCGAACCTTCCT
TGGGCCTCTTACCGCTGCTGTACGTTTCGTATATGTAAAATAGGCGGAGC
AACTGCTGTGAACCAAATGGCGTTTGAAGGGAAGCGTCTATGCAGCTGCG
TATTGAAGTAGAGCGTGCCCGACTGCGGCACTTCAAAGCAGCCCTAACGG
TTGCCGCTGTACCTTTATTTGCTCACAGGGTGACTTCCGAGGAGCTATTT
CGCCGGATGGCAGCTATTGGACGATGGGTGAGCATGTATGCGACGGAACT
CGCCTTTCACGCACACTGCCATCCAATCCAATGGACTTCGAGGTCAAGCT
TTCCTACCTCAAATCCTGACACCTCGCTGATTGCATTTGCCTGTCAACAG
AGACCCTCGATGACAACGGTAAGATGCTCTACCTGACGTTGGAGAAGGCA
CCGCAGCTTACCGGATTGGGCCCATGGATGGGTGTTGTTCAGGGAGAGAA
GCAAGTGGACTCCGATTATCCGGAGGAGAAGAAGGCCAGTTTTTTCTTTT
CGGGGTGTAAGATTTGTCAACTGCTGTTGCACGCTATGGAGTAAGGTCTG
ACCGCTGTTGTCGATTTTTAGAGAAGGTTTGTGAACGTTTTTATTCTGTT
AGAAAACGTAAACCCCGCTAGTATGCATACGAGCCAGCGCACGTTTCGGC
GGCACATGTGCGTGGCATAACTGAGCGCTCTCTACCACAGTACTTCCCAG
CCATCGGCACCTTGGCCTCCGCACACGCACATAAAGAGGCCCTTCACGGG
GGAACGTGCTGTTGACAACGGTGATCCCGCATCGTATATATGTATATACT
GCCCATAACCACCATATTTTATTTTCCTTGTGAGACGTCTCCACATTTAT
TGATTTATTTTATGTCGTTTCACCCATCGCAGGCGGCGGAGGTAGCTGCT
ATGGCTTACGACGACAATAAGGCAGAAGGTGACGATGGCTTGGCGCGGCT
TAGCATACCCTCGGTGCAAGTTGGATGTCATTTCGTTTCCAAATTGTGAC
AATCGATCAACCTGAAGCTACCACAGCACACGTTCGTTGTGTCCGGTAAG
CCATTTACTCAAACCCAGCCTACATATTAGATTTTGGCGGTAGATCTTGT
TCTGTCCAGACGTTCATGTGAGACTCTCTACCCTTCGCAACGGCTATGCG
CGCCCGACGGGGCTCAATCAGATGTACCCCGTCACACTGGAGTTGTGGAC
GAGGATGGGTTCTGCAGAGATCTGCTGGCCGTGCAATCAATGAGCGGGGC
AATGGTCGCTCGCCAGGTAAAGTTGTACACCCTGCAAGCCGGCTGTTGTT
TAAGTTGCAGGACATCAGTTGGGTTCAGGGGTGGTGCCGATCCGTATTGC
GATTCATCAACTAGTGTACGCAACCACTTGTTGGTTCGGAGTGACGTACG
GTACGTGTTGGATCACCAAGGGTTACCTGCCACTTCCCCATTTGTGAGTG
GCCGTGGTTTGTTCTACCCGCACAAATTTGTTGTGCGGCAAGCTGCGGGG
GGGCGCACACGCGCATACAACATATTGGGGGGTCGCTTTCGATATAATTG
CCGGATAGGGTGTGCACGGCCATATTCACAGTGAAAGGTTACTTTAATAA
GCAGTTGCCAGTGCATGTTCCTCTTGCATCCGACATGTCGATTCGTCACA
ACTTGGAAAACGTGCTTGCACAGGTACCAGTGAACGGCAACGCTTTATTC
TCCGCGGTGGCAGTGTCACGATGGTTCATTGAGAACGGTGAACACCCGGT
GACCTCATCACCAGAAATAGAAGCAGTAGCCAAGGATTTACGGCAGGTGC
GATTGACGGACCGTGAGTTCGATGCACTCGTGCCTCCGTCAGGTTGGGTT
TGCTATTCTTTGGCCCGTATTCCAAAAGCCGTGTGTCGTTACCTGGGATT
AGTGAGATTTCTGGGGTATCAAAAATGCTATCCCAGAAATCGCTCAAACC
CCAGAGAATGAAGAAGGCCTGAAACTCAACTCAACGTCTTTTCCGGAGTT
TACGCTCAGAAATCGCAGAGCCTTGAGCCTGCATTGAAGGCGGGACGTAG
ACCTCATCGTATCTTACGAGTAAGCGCGCAAGAAGGTTTGCATGGCTAGC
GAACAAACGATTGTGCCCGGAAGAAGCTGGTTGCGCCCTGGCACTTCGTC
GGTCTCGTTCATAAATCGTTCGCGCATCACATGGCACACTATTAGACATG
CTTTCAAGCATTTGGCGTAATTGTCAGATATGTAGCTGGACGCGAAAAAT
TGTGTGCCACAGGGCTAGCAGCGTTACTTTTGATTCGACTACGGTGTTAG
CATGCAAAACGGGAGTTTCAAGTTCCCGTTCGGGCTGTTCATGCGCCGCC
GGACCTGCTGATGTCTTGCAGAAAACGCTGGACTACCTCACCCAAGCATA
CAAGGAGAATGCTCTGATCTACCTGTCGGGCGAGACCATGTCGGCTAGGC
CCTTCGTCGCCGCCCAGGCTAAAGCTAACAGCATGGCGGACGGGGATGAG
TACTTGAAGGTGTGTTTCGGCCTCTTGGCTCCGTGGTGTGTGTAGTCTTG
TGGCAACGCCAAAGTCGTATCCCCACGACTGCAACCATGCTGTCAGCAGC
CTTTCGGGGACGTACATGCCTTCTTTGATCAGAGTGTTTGAAAGGAGTCT
CATCAGTACATAGCTTCCACGTGCCGCAGCAAAATTCATGTGCATAATTG
TATTTCACTCCTTTTTTTCAGCTCGTGATGCGCCCAAACTTTGTACATGA
GTGTTCTCATATCAAGCAGTCGGATTACGTGCCTGTAGATTCAGCGATAA
AAGACATGGTGAAATATTGATATTGCAAGTCGACGGCGTGATTAAACTTC
GAGAACATCAACGGTGTCCGAGAATTAGGAGAGCAGCCGCTTGCTTTGCT
TGCAGGCAGAGAACCCCGTTGGAGGTTGACTTGTCACGACCTTGATTGTG
CTTGTTTTTTCCAGGCTATGCGGGATGACACCATGTGGGGAGGCGGTGGG
GAGGTCGTGGGCCTGACGCACGTGCTCAAGAGGCCGATACATGTCTACGA
CCTCATATCGACAGGGCGACGGTGAGCGAAAGCCACATCCAGTGAATTTT
GGGCGGCACCACGTGTGCACCCCCTGCTTGTGCCGAATTGAATTTTTGCC
CTGGCTCATAACTTGTCCGTGTTGTACTCCCAGGGGAAGGACTTAATATT
CAGTTGGGGTCCTTGTGACCCTCCAATATGCATCAAACGGATTGTTAATG
CAAGGCCTTTGTCCGCTTTAGGCACGTCATTCTTGTGTGCGGGTTTTGGA
ATACGCGAGTTTTACGATAACTTCCCCGCCTCTATTTTATCACGTTAATC
CATCGTGATTCTCCCGCGAAGGCACCAGAGTACGCCAGCCTCATCGTCCG
CACCTTTCGCGGCGCCGGGGCTAGAAAACTGCGGACTGGAGAGGTTCGCG
TTGCGGTTGGGATAAAACCTCTCCGACAACAGTAGTCTCGATGTTCACGT
CCATCGTTCTTGGCTCGCCCAGTCCATGTCGTTCGTGTTTTTTCCATCCT
GCTGTGCGTTCATGTTGATACTATTTGCACTTGGCGACGTTCTTTGTTTT
TTTCGCAGGTTTGCGCTGAGGGTAATCGGAAGGTTCGGGGCCCCGCTGTA
CGCTGTGGAGCAGCCGATACACATTGTCAGCACCTACGCAAGGTACAGCC
GTTTTGGGCGCACTTGGATGGATAAAACCTGTGGTGGTTTTTTGGCGGAA
GATACGTTCGCGTCGTTAAATCAAGGCAAAACAAACTCTCAATTGAATCC
GACGTTTCATTCGCCCTGCGAACCCCGATCGTTGACTTTGACGCAGATTC
CCCGATTTGGACCCGGGGAGCCAAGGCGGCGAGGGGAACCACTACGTCGC
CTTGTATCCTTACGAAGAGGTTCCTGAGAAGAACAAAGGAAAACCCTAAG
CGTCAAGTCAAACCACGGAGTTTGTTCTTCGGAGCGCATCTCGTGCCAGC
TCATCCTACTTTTTGTGTGTGGCCGCTGAAGCGAAATTGTATTGTTTGGA
GCCACATTCGGACGCCTGGCGGGCGGTCTGAAGATGGTGCGCTAGTACAC
TTTGATTTAGAGTAAAGACCCTTATATGTGGTGCACGCATAGCCAACAGC
AGCAGTGTCGATAGATGTGGCGAAGAAAGGGTAGCAGGGCTCTTGAGGCC
ATCAGCTTGTACGGCATACAAACGATTTGGTACCCCACACTTGTTGTGTT
AATCCGCCAACGCACATAGCACACAGCGCGTCTATGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig568:11556..17592-

>mRNA_L-elsbetiae_contig568.14044.1 ID=mRNA_L-elsbetiae_contig568.14044.1|Name=mRNA_L-elsbetiae_contig568.14044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2538bp|location=Sequence derived from alignment at L-elsbetiae_contig568:11556..17592- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGTTGGAAGCTGTCGTTACAGTGATTTTGCCAATTTCGGCTTCAGC
TTTCTCTACGGCCACAGGTCGGCTTTCAGGTTGCCTTGGCAGCGAGGTCA
GTCCTCGTGTTAGCCCACAGGGAATGTCGCGATATCGGAATGGATGGACA
AATCGACCAGGAACTTTGAGAGAGTTGTCGATGAGTTTTGGAGCTGGAGC
GACCGATCGATACTCGTGATGTGGTTGGAAGCTGTCGTTACAGTGATTTT
GCCAATTTCGGCTTCAGCTTTCTCTACGGCCACAGGTCGGCTTTCAGGTT
GCCTTGGCAGCGAGGTCAGTCCTCGTGTTAGCCCACAGGGAATGTCGCGA
TATCGGAATGGATGGACAAATCGACCAGGAACTTTGAGAGAGTTGTCGAT
GAGTTTTGGAGCTGGAGCGACCGATCGATACTCGTGGGACGAGACGGACA
AGGAAGTTAATGTCAAGGCGCGGTTACCTGCATGGGCGAAGGGCAAATCC
GTCATCCTCGACATGACCCCAACCCACATCAAGCTCTCCCTCAAGGAAGA
GGGGGAAAAACCCATTATCGAGGGACGAGACGGACAAGGAAGTTAATGTC
AAGGCGCGGTTACCTGCATGGGCGAAGGGCAAATCCGTCATCCTCGACAT
GACCCCAACCCACATCAAGCTCTCCCTCAAGGAAGAGGGGGAAAAACCCA
TTATCGAGGGTGACTTCCGAGGAGCTATTTCGCCGGATGGCAGCTATTGG
ACGATGGGGTGACTTCCGAGGAGCTATTTCGCCGGATGGCAGCTATTGGA
CGATGGAGACCCTCGATGACAACGGTAAGATGCTCTACCTGACGTTGGAG
AAGGCACCGCAGCTTACCGGATTGGGCCCATGGATGGGTGTTGTTCAGGG
AGAGAAGCAAGTGGACTCCGATTATCCGGAGGAGAAGAAGGCCAAGACCC
TCGATGACAACGGTAAGATGCTCTACCTGACGTTGGAGAAGGCACCGCAG
CTTACCGGATTGGGCCCATGGATGGGTGTTGTTCAGGGAGAGAAGCAAGT
GGACTCCGATTATCCGGAGGAGAAGAAGGCCAATCTTGTTCTGTCCAGAC
GTTCATGTGAGACTCTCTACCCTTCGCAACGGCTATGCGCGCCCGACGGG
GCTCAATCAGATGTACCCCGTCACACTGGAGTTGTGGACGAGGATGGGTT
CTGCAGAGATCTGCTGGCCGTGCAATCAATGAGCGGGGCAATGGTCGCTC
GCCAGATCTTGTTCTGTCCAGACGTTCATGTGAGACTCTCTACCCTTCGC
AACGGCTATGCGCGCCCGACGGGGCTCAATCAGATGTACCCCGTCACACT
GGAGTTGTGGACGAGGATGGGTTCTGCAGAGATCTGCTGGCCGTGCAATC
AATGAGCGGGGCAATGGTCGCTCGCCAGGTACCAGTGAACGGCAACGCTT
TATTCTCCGCGGTGGCAGTGTCACGATGGTTCATTGAGAACGGTGAACAC
CCGGTGACCTCATCACCAGAAATAGAAGCAGTAGCCAAGGATTTACGGCA
GGTACCAGTGAACGGCAACGCTTTATTCTCCGCGGTGGCAGTGTCACGAT
GGTTCATTGAGAACGGTGAACACCCGGTGACCTCATCACCAGAAATAGAA
GCAGTAGCCAAGGATTTACGGCAGAAAACGCTGGACTACCTCACCCAAGC
ATACAAGGAGAATGCTCTGATCTACCTGTCGGGCGAGACCATGTCGGCTA
GGCCCTTCGTCGCCGCCCAGGCTAAAGCTAACAGCATGGCGGACGGGGAT
GAGTACTTGAAGAAAACGCTGGACTACCTCACCCAAGCATACAAGGAGAA
TGCTCTGATCTACCTGTCGGGCGAGACCATGTCGGCTAGGCCCTTCGTCG
CCGCCCAGGCTAAAGCTAACAGCATGGCGGACGGGGATGAGTACTTGAAG
GCTATGCGGGATGACACCATGTGGGGAGGCGGTGGGGAGGTCGTGGGCCT
GACGCACGTGCTCAAGAGGCCGATACATGTCTACGACCTCATATCGACAG
GGCGACGGCTATGCGGGATGACACCATGTGGGGAGGCGGTGGGGAGGTCG
TGGGCCTGACGCACGTGCTCAAGAGGCCGATACATGTCTACGACCTCATA
TCGACAGGGCGACGGTTTGCGCTGAGGGTAATCGGAAGGTTCGGGGCCCC
GCTGTACGCTGTGGAGCAGCCGATACACATTGTCAGCACCTACGCAAGGT
TTGCGCTGAGGGTAATCGGAAGGTTCGGGGCCCCGCTGTACGCTGTGGAG
CAGCCGATACACATTGTCAGCACCTACGCAAGATTCCCCGATTTGGACCC
GGGGAGCCAAGGCGGCGAGGGGAACCACTACGTCGCCTTGTATCCTTACG
AAGAGGTTCCTGAGAAGAACAAAGGAAAACCCTAAATTCCCCGATTTGGA
CCCGGGGAGCCAAGGCGGCGAGGGGAACCACTACGTCGCCTTGTATCCTT
ACGAAGAGGTTCCTGAGAAGAACAAAGGAAAACCCTAA
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