mRNA_L-elsbetiae_contig5657.14007.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: D7FZW7_ECTSI (DUF2470 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW7_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 1.610e-167 Identity = 252/280 (90.00%), Postives = 264/280 (94.29%), Query Frame = 2 Query: 2 GHSPPKATGHAAGKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITG-VEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVA 838 GHSPPKATGHAAG GP+RSPE EALAARIQEHQ +AARLS TEEVRNLMQYSTGFGVLSTNSR+LEGYPSGSVVGF LD+ GRPLFAFSS+SAHTGDL SR SLTVT+ATFKGAADGRVSLIGDVNKVP+EDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDV PEDYLTTAPDAVAEFSAPI +HMN DHS+TTRAMI H+ITG VEV SAQITAVDRLGMYV+VGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA+A Sbjct: 20 GHSPPKATGHAAGPGPQRSPEQEALAARIQEHQQAAARLSHTEEVRNLMQYSTGFGVLSTNSRTLEGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPEEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 299
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A836CG39_9STRA (DUF2470 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG39_9STRA) HSP 1 Score: 355 bits (912), Expect = 5.720e-116 Identity = 182/272 (66.91%), Postives = 222/272 (81.62%), Query Frame = 2 Query: 23 TGHAA-GKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITG-VEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 832 TGH G GP+R+PE EAL+ARIQEHQ SAARL+K EEV+ L+ YSTGFGVLSTNS+ LEGYP+GSVVGFGLD+ GRPLFAFS++SAHT DL RAS+T+ +A FKGA+DGRV+LIGDV +VP++++ +VR YK KHPNA+WVDFGDF RMDTIKA+RFVGGFAMAGD+ EDYL T PD +A F+ PI+ HMN+DHS++T AM++HYITG +V+SA + VDR GM V+V M G+SGKLRLPFP PA+ RK VK IVEMT+AA Sbjct: 10 TGHQPRGGGPQRTPEQEALSARIQEHQRSAARLTKAEEVKTLVAYSTGFGVLSTNSKKLEGYPNGSVVGFGLDDAGRPLFAFSTMSAHTSDLGADGRASMTIMAANFKGASDGRVTLIGDVGRVPEDEIEAVRTSYKVKHPNAFWVDFGDFSWFRMDTIKAIRFVGGFAMAGDITSEDYLATKPDPIAGFAEPIMTHMNSDHSDSTAAMVEHYITGGAKVDSATLVGVDRKGMNVLVAM-GGESGKLRLPFPSPADDRKAVKDRIVEMTRAA 280
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A7S4EVY0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVY0_CHRCT) HSP 1 Score: 306 bits (783), Expect = 2.500e-95 Identity = 158/275 (57.45%), Postives = 204/275 (74.18%), Query Frame = 2 Query: 26 GHAAGKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEGS---SRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVAA 841 GH P+ S E++A+ A++ HQ AARLSK E+ R+L+ YSTG+GVLST S+SL G+PSGSVVGF +D+ G P+F FS +S H DL S + A+LTVT+ FKGAA+GRV+L+G V +VP ++ +RE+Y+ KHPNA+WVDFGDF +MD +KA+RFVGGFA AGD+ PE+Y+ D + F+ P++EHMNADHS+ T M++HYI EVE A++ A+DRLGM V V GQS KLRLPFPRPAESRKDVKTLIVEMTQA+ A Sbjct: 98 GHQVRNAPELSEEEKAVQAKVMAHQQDAARLSKAEDSRSLVAYSTGYGVLSTMSKSLPGFPSGSVVGFAIDDKGLPIFCFSGMSGHAQDLLASPDAAPAALTVTANDFKGAAEGRVTLVGTVRRVPSDEADPLREIYRAKHPNAFWVDFGDFSWFKMDELKAVRFVGGFARAGDMTPEEYMQAEVDPIQAFAKPVMEHMNADHSDATTLMVQHYIGLPEVEDAKVAALDRLGMTVQVTR-KGQSFKLRLPFPRPAESRKDVKTLIVEMTQASAKA 371
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A7S4FQ63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQ63_9EUGL) HSP 1 Score: 303 bits (776), Expect = 2.670e-94 Identity = 153/266 (57.52%), Postives = 200/266 (75.19%), Query Frame = 2 Query: 47 PKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVAAA 844 PK S E+ LA +QEHQ AARLS E+ RN+MQY TG+GV+STNS S +GYPSGS+VG+ D+ GRP+F+FS++S+HT D++ R SLTVT FKGAADGRVSL GD+ +VP E+ +V MY KKHP+A+WV FGDF RM+ IK +R++GGFA AG + PE+Y TAPDA+A F+ P++ HMNADH + AM+ HY+ ++VE+A I +DRLGM ++V +GQS KLRLPFPRPA +RK+VK LIVEMT+A+ AA Sbjct: 104 PKMSEEEMKLAQALQEHQKEAARLSHAEDARNMMQYGTGYGVISTNSESDDGYPSGSIVGYAPDDKGRPVFSFSTMSSHTQDIQKDPRVSLTVTVEGFKGAADGRVSLTGDLVRVPKEEKEAVAAMYLKKHPDAFWVQFGDFSWWRMENIKTIRYIGGFARAGSITPEEYEATAPDAIAAFATPVMSHMNADHGDANVAMVNHYLP-IQVEAANIVGLDRLGMDMMVTR-EGQSFKLRLPFPRPATNRKEVKDLIVEMTKASAKAA 367
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A7S0LER7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LER7_9EUKA) HSP 1 Score: 278 bits (712), Expect = 8.780e-85 Identity = 150/283 (53.00%), Postives = 197/283 (69.61%), Query Frame = 2 Query: 26 GHAAGKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDL-------EGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVAAAE 847 GHA P+ S E++ + + EHQ SAARLS+ E+ R+L+ YSTG+ VLST S +L+GYPSG++VGF DE G P F FS++S+HT DL E +A+L VT+ F+GAADGRV+LIGDV++V E + +RE+Y++KHPNA+WVDFGDF RM +KA+ FVGGFA AG + PE Y+ D + F+AP++ HMN DHS +T AM+ HYI +VE A++ +DRLG V V GQ+ KLRLPFPRPA RKDVKTLIVEMT+AA+ E Sbjct: 74 GHAVRNQPELSEEEKIVQTAVMEHQRSAARLSQAEDARSLVGYSTGYAVLSTLSSALDGYPSGALVGFAHDERGLPFFCFSAMSSHTKDLVAAERSCESGGKAALCVTAKGFEGAADGRVTLIGDVSRVKKEQVEEQGLRELYRQKHPNAFWVDFGDFTFYRMHELKAINFVGGFARAGSIDPEAYMNAVIDPIQAFAAPVMSHMNDDHSSSTTAMVMHYIGLPQVEKAELVQLDRLGFMVQVTRL-GQTFKLRLPFPRPAGDRKDVKTLIVEMTRAALGNPE 355
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A6T8CG84_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8CG84_9EUKA) HSP 1 Score: 274 bits (700), Expect = 3.380e-84 Identity = 141/266 (53.01%), Postives = 195/266 (73.31%), Query Frame = 2 Query: 56 SPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVAAAE 847 S E++ + + EHQ AARLS+ E+ R+L+ Y++G+ VLST S++++GYPSGS+VGF DE G P+F FS++S HT DL + +A+L VT+ F+GAADGRV+LIGDV + E++ + ++E+Y+ KHPNA+WVDFGDF RM +KA+ FVGGFA AG+ P DY+ + D + F+AP++ HMNADHSE+T AM+ HYI +VE A++ +DRLG V V GQ+ KLRLPFPR AE RKDVKTLIV+MTQA+++ E Sbjct: 1 SEEEKRVQTAVMEHQRGAARLSQAEDSRSLVAYNSGYAVLSTLSKAVDGYPSGSLVGFATDEKGLPVFCFSAMSGHTKDLAKAGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEADGLKELYRAKHPNAFWVDFGDFTWYRMTELKAVNFVGGFARAGNPSPADYMDASVDPIQAFAAPVMGHMNADHSESTIAMVMHYIGLPQVEKAELVQLDRLGFMVQVTR-TGQTFKLRLPFPRAAEDRKDVKTLIVQMTQASLSDEE 265
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A7S3U682_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U682_9SPIT) HSP 1 Score: 276 bits (707), Expect = 3.910e-84 Identity = 146/275 (53.09%), Postives = 199/275 (72.36%), Query Frame = 2 Query: 26 GHAAGKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDL---EGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDED-LPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVA 838 GH P+ S E++ + A + EHQ AARLS+ E+ R+L+ YS+G+ VLST S+ L+GYPSGS+VGF D+ G PLF FS++S+HT DL ++A+LTVT+ F+GAADGRV+L+GDV +V DE+ L ++R+ Y++KHP+A+WVDFGDF RM +KA+RFVGGFA AGD+ P+DY D + F+ P++ HMN DHS++T AM+ HYI +VE A + A+DRLG V V GQ+ KLRLPFPR AE RKDVK LIV+MTQ +++ Sbjct: 64 GHQVTGAPQLSEEEKKVQAAVMEHQKGAARLSQAEDARSLIGYSSGYAVLSTLSKQLDGYPSGSLVGFATDDKGLPLFCFSAMSSHTQDLMRDPKGAKAALTVTATGFEGAADGRVTLVGDVARVKDEEELVTLRKTYREKHPDAFWVDFGDFSWWRMRELKAVRFVGGFARAGDIAPDDYQAATVDPIQAFAKPVMNHMNEDHSDSTIAMVMHYIGLNQVEKASLVALDRLGFMVQVTRL-GQTFKLRLPFPRAAEDRKDVKNLIVQMTQESLS 337
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: R1D7B7_EMIHU (DUF2470 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D7B7_EMIHU) HSP 1 Score: 265 bits (678), Expect = 6.910e-81 Identity = 139/265 (52.45%), Postives = 194/265 (73.21%), Query Frame = 2 Query: 47 PKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEG-SSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 832 P+ S E++A+ A + EHQ AARL+ E+ R+L+ YS+G+ VLST S ++GYP+G++VGF D +G P+F FS++S+HT DL +A+LTVT+ F+GAADGRV+LIGDV +V E + ++E+Y+++HPNA+WVDFGDF RM ++KA+ FVGGFA A P++YL+ D + F+AP++ HMN DH+E+T AM+ HY+ +VE+AQ+ A+DRLG V V GQ+ KLRLPFPR A RKDVK+LIVEMTQAA Sbjct: 2 PELSEEEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLSTLSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRMASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYVGLPDVEAAQLVALDRLGFMVQVTR-QGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 265
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A7S3TA66_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TA66_EMIHU) HSP 1 Score: 268 bits (684), Expect = 9.690e-81 Identity = 141/272 (51.84%), Postives = 197/272 (72.43%), Query Frame = 2 Query: 26 GHAAGKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEG-SSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 832 GHA P+ S E++A+ A + EHQ AARL+ E+ R+L+ YS+G+ VLST S ++GYP+G++VGF D +G P+F FS++S+HT DL +A+LTVT+ F+GAADGRV+LIGDV +V E + ++E+Y+++HPNA+WVDFGDF R+ ++KA+ FVGGFA A P++YL+ D + F+AP++ HMN DH+E+T AM+ HY+ +VE+AQ+ A+DRLG V V GQ+ KLRLPFPR A RKDVK+LIVEMTQAA Sbjct: 71 GHAVRNMPELSEEEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLSTLSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRLASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYVGLPDVEAAQLVALDRLGFMVQVTR-QGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 341
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Match: A0A6U3QPI0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QPI0_9STRA) HSP 1 Score: 262 bits (669), Expect = 9.860e-79 Identity = 141/285 (49.47%), Postives = 186/285 (65.26%), Query Frame = 2 Query: 20 ATGH---AAGKGPKRSPEDEALAARIQEHQDSAARLSKTEEVRNLMQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLEGSSRASLTVTSATFKGAADGRVSLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLTTAPDAVAEFSAPILEHMNADHSETTRAMIKHYITGVEVESAQITAVDRLGMYVVV-----GMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAVAAAEK 850 A GH +AG + PE+ + EHQ +A +L VR L+QY+ GF V+STNS++ GYP GSVVGF DE GRP+F FS +S HT DL R S+T+ + FKGAADGRV+L+G V VP E+ +++++Y KHP A+WV+FGDF RMD I+ +RFVGGFA AG+V PE+Y +PD ++ F + HMN DH ++T AMI I G++V A IT+VD LGMYV V Q KLRLPFPR AE RKDVK +IVEMT++A A+++ Sbjct: 65 APGHDVRSAGVAQEMDPEEMKVQQAFGEHQQNAPKLDFATSVRTLVQYNHGFAVMSTNSKANPGYPGGSVVGFAPDENGRPVFIFSGMSTHTQDLLADPRCSVTIAAKEFKGAADGRVNLMGKVKLVPSEEREALKDIYLAKHPGAFWVNFGDFNWFRMDEIEDIRFVGGFARAGNVTPEEYAAASPDEISAFGMHVANHMNDDHMDSTIAMISSQIPGLDVSEAVITSVDSLGMYVKVTRTPRASDQPQQFKLRLPFPRKAEDRKDVKNIIVEMTRSAAVASKE 349 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5657.14007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5657.14007.1 >prot_L-elsbetiae_contig5657.14007.1 ID=prot_L-elsbetiae_contig5657.14007.1|Name=mRNA_L-elsbetiae_contig5657.14007.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp MQYSTGFGVLSTNSRSLEGYPSGSVVGFGLDETGRPLFAFSSLSAHTGDLback to top mRNA from alignment at L-elsbetiae_contig5657:3456..10352- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5657.14007.1 ID=mRNA_L-elsbetiae_contig5657.14007.1|Name=mRNA_L-elsbetiae_contig5657.14007.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6897bp|location=Sequence derived from alignment at L-elsbetiae_contig5657:3456..10352- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5657:3456..10352- >mRNA_L-elsbetiae_contig5657.14007.1 ID=mRNA_L-elsbetiae_contig5657.14007.1|Name=mRNA_L-elsbetiae_contig5657.14007.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig5657:3456..10352- (Laminarionema elsbetiae ELsaHSoW15)back to top |