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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 624 |
| Cds size | 621 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816601.4537718-CDS-L-elsbetiae_contig5651:6325..6474 | 1622816601.4537718-CDS-L-elsbetiae_contig5651:6325..6474 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5651 6326..6474 - |
| 1691683676.9320357-CDS-L-elsbetiae_contig5651:6325..6474 | 1691683676.9320357-CDS-L-elsbetiae_contig5651:6325..6474 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5651 6326..6474 - |
| 1622816601.466282-CDS-L-elsbetiae_contig5651:7058..7350 | 1622816601.466282-CDS-L-elsbetiae_contig5651:7058..7350 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5651 7059..7350 - |
| 1691683676.94725-CDS-L-elsbetiae_contig5651:7058..7350 | 1691683676.94725-CDS-L-elsbetiae_contig5651:7058..7350 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5651 7059..7350 - |
| 1622816601.4788754-CDS-L-elsbetiae_contig5651:8046..8226 | 1622816601.4788754-CDS-L-elsbetiae_contig5651:8046..8226 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5651 8047..8226 - |
| 1691683676.9656398-CDS-L-elsbetiae_contig5651:8046..8226 | 1691683676.9656398-CDS-L-elsbetiae_contig5651:8046..8226 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5651 8047..8226 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5651.13999.1 >prot_L-elsbetiae_contig5651.13999.1 ID=prot_L-elsbetiae_contig5651.13999.1|Name=mRNA_L-elsbetiae_contig5651.13999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
NSNNNNSTSTAFVQATTTAVRSKRTKSSTNNNSSSSSSSNNNSSNSNNST
SRAFVQAITAAGNKEREASSPSSLITVPLSPDSGIAAGAAASPEGASGLD
FDDFDVVVTLLGSGANNESDNDGGGNGHGNDNSNDSGNGNNNGNGKGCKD
ANGLVPNGRDGDRCTPDRGESAFSGGLDSSFDWFKGGNSPGSFVGLLPES
KSVFPII back to topmRNA from alignment at L-elsbetiae_contig5651:6325..8226- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5651.13999.1 ID=mRNA_L-elsbetiae_contig5651.13999.1|Name=mRNA_L-elsbetiae_contig5651.13999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig5651:6325..8226- (Laminarionema elsbetiae ELsaHSoW15)
AACAGCAACAACAACAACAGCACGTCCACAGCTTTCGTCCAGGCCACCAC
CACAGCCGTCAGAAGCAAGAGGACCAAGAGCAGCACCAACAACAACAGCA
GCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAACAACAGCACG
TCAAGAGCTTTCGTCCAGGCTATCACAGCGGTAAGAAGCGAGCACGCCTC
ACCATCGATTTGGGTGAATAAGCGAAACATGTCTGTATACTTCAATGAAT
ACATACTACGCGTTCTCGAAAATATTGCCCCGATGTTGCAAAGCTAGTGC
AGAAGATTAACCAAGAGCCACGAAAAACGTAGATCTCCGTCCACCCCCCC
CACAAGCTATGTACGGACCAAGCTGATTTCCCCTATGTACGTACATATGT
ACATTGGAGATTTTTCTCACTCCATGGCAAAATATGTGCCGTAAGAGAGA
ACCTGGTCCCCCCTCAGCGAGAGAGAAAATCGATTACAAACGGGGCTGGT
AGTTCACCGCCCGTCAGTGCTTACGACGGATGCGGCCGAGGGGATGGACC
ACGTATGTCCCGTGGCATTGTACTCCAGGATCATGGGTGAAAACAAAAAC
GCTGCAGATCAAACCCATGCCGGCAAAACGCTCGCAGCAAAAAGCCGGAC
CGAACACAGTGCTCAGAGTTACAGGGAAGGAGGTGCAACGCGTCCGATCC
GCGAGGGTGCAGGAGGAGAACGCTACTGCTGCTGTCAGTCTTAACCTCTG
GTCGGGGCCGTTTGCAAATATGCTCCGCACTCCACGCTATTTCACCGGCC
CTTAGGCTTTCGAAGGTTATCTACATCAAAATTACTTTGCTTTCACGACC
GTGACCGGATTTATCGCAAACCTCAGGCCGGCAACAAGGAACGGGAAGCT
TCTTCGCCGTCGAGCCTCATCACGGTGCCCCTCTCACCTGATTCCGGCAT
AGCGGCGGGGGCGGCGGCATCCCCCGAAGGTGCAAGTGGTCTGGACTTCG
ATGACTTCGACGTTGTCGTGACGCTTCTCGGGTCTGGCGCAAACAACGAA
AGCGACAACGACGGCGGCGGCAACGGCCACGGCAACGACAACAGTAACGA
CAGCGGCAACGGCAACAACAACGGCAACGGCAAAGGCTGCAAAGACGCCA
ACGGTCTTGTGCCTAATGGTATGTAAATATACACTATTTTTGGTTGTGAT
GTCTGGTATGCCACGGCATGCTTCGAAGTACACAGATATTGTAGCACTAC
AGTAGTAGTTGTGGTCGCTACTGCTGCGGTAAGTTGCCAGAATCGCCTCG
GTGTAATAAGAGTGTGAGACATGCGCTGCTACGTCTTATTTAGGGGGCGT
GTTGGAGTACGACTGTCAAGAAAAACGCCTTTTCCCTCCCGTGATGTTCT
GGCAAACCTCCTTGAAGACTAAACCGAACGAGAAGAGTTTTTTAGCTTTT
CTGTTCCCGCGATCCAGCTCCTTCCTCTACATGGTATTCCCGCTCTCGAT
CATCGCGATACTGCCTGCTGTGCTGCCAAAGGCCGACCAGACCTCAACGA
AAACCAATATAGCGCGTGGTCGGTCTCCTTTGGCATTTTAACACGTTTCC
CAGTCAAGAAATACCTTCCATGATGATGCACGGTGCACCCTGCCTGATGC
TTGGGGATTATTGGGGCTATTTAGCGAACGGCGCCGCGCACTAGCACCAC
CGCTGCTGAAACCACAAAAATCTCCTGCACCTACCTCTCGAAATATCATC
AGGCAGGGACGGCGACCGTTGCACGCCGGACCGGGGCGAATCTGCCTTCT
CCGGCGGCCTTGACTCCAGCTTCGACTGGTTCAAGGGCGGCAACTCTCCA
GGCTCCTTCGTTGGCCTGCTACCGGAATCCAAGTCTGTGTTCCCCATCAT
CG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5651:6325..8226- >mRNA_L-elsbetiae_contig5651.13999.1 ID=mRNA_L-elsbetiae_contig5651.13999.1|Name=mRNA_L-elsbetiae_contig5651.13999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig5651:6325..8226- (Laminarionema elsbetiae ELsaHSoW15)
AACAGCAACAACAACAACAGCACGTCCACAGCTTTCGTCCAGGCCACCAC
CACAGCCGTCAGAAGCAAGAGGACCAAGAGCAGCACCAACAACAACAGCA
GCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAACAACAGCACG
TCAAGAGCTTTCGTCCAGGCTATCACAGCGAACAGCAACAACAACAACAG
CACGTCCACAGCTTTCGTCCAGGCCACCACCACAGCCGTCAGAAGCAAGA
GGACCAAGAGCAGCACCAACAACAACAGCAGCAGCAGCAGCAGCAGCAAC
AACAACAGCAGCAACAGCAACAACAGCACGTCAAGAGCTTTCGTCCAGGC
TATCACAGCGGCCGGCAACAAGGAACGGGAAGCTTCTTCGCCGTCGAGCC
TCATCACGGTGCCCCTCTCACCTGATTCCGGCATAGCGGCGGGGGCGGCG
GCATCCCCCGAAGGTGCAAGTGGTCTGGACTTCGATGACTTCGACGTTGT
CGTGACGCTTCTCGGGTCTGGCGCAAACAACGAAAGCGACAACGACGGCG
GCGGCAACGGCCACGGCAACGACAACAGTAACGACAGCGGCAACGGCAAC
AACAACGGCAACGGCAAAGGCTGCAAAGACGCCAACGGTCTTGTGCCTAA
TGGCCGGCAACAAGGAACGGGAAGCTTCTTCGCCGTCGAGCCTCATCACG
GTGCCCCTCTCACCTGATTCCGGCATAGCGGCGGGGGCGGCGGCATCCCC
CGAAGGTGCAAGTGGTCTGGACTTCGATGACTTCGACGTTGTCGTGACGC
TTCTCGGGTCTGGCGCAAACAACGAAAGCGACAACGACGGCGGCGGCAAC
GGCCACGGCAACGACAACAGTAACGACAGCGGCAACGGCAACAACAACGG
CAACGGCAAAGGCTGCAAAGACGCCAACGGTCTTGTGCCTAATGGCAGGG
ACGGCGACCGTTGCACGCCGGACCGGGGCGAATCTGCCTTCTCCGGCGGC
CTTGACTCCAGCTTCGACTGGTTCAAGGGCGGCAACTCTCCAGGCTCCTT
CGTTGGCCTGCTACCGGAATCCAAGTCTGTGTTCCCCATCATCGCAGGGA
CGGCGACCGTTGCACGCCGGACCGGGGCGAATCTGCCTTCTCCGGCGGCC
TTGACTCCAGCTTCGACTGGTTCAAGGGCGGCAACTCTCCAGGCTCCTTC
GTTGGCCTGCTACCGGAATCCAAGTCTGTGTTCCCCATCATC back to top
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