mRNA_L-elsbetiae_contig56.13921.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: D7G7Q4_ECTSI (Dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q4_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 3.180e-189 Identity = 270/348 (77.59%), Postives = 304/348 (87.36%), Query Frame = 1 Query: 13 SSRALADRVHSTRHDAVGARPIGARPGESEVDAPSFFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLTPMEELQGVEVAHRILSLTAEYMELVKRFPASMVSIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIVRE 1056 S +AL DRV S + ++ A SE + SFFE++G P++IAAPMVEQSEAAFRYLVRRHGC LAYTQM+H+EKFAPDNA KFR +RFDGVDD+EDRPLI QFCGN+P TVVRAARHVEH+CDAVDLNLGCPQ IA+KGNYGA+LL NPQLCEDIV+AMSRELS+PVTVKIR Q++ESDTLDLARRLEGAGAQLLTVHGRT++S+KT QGAA+WDII KVK V IPVVANGG+ET ADAERLLEETGADAVMSSEGLLE+P LFD L PMEELQG+EVAHRILS T EYMELVKR+PA M+SIKGHLFKML+RLLECHHDLR RL H++CDA+EADVIV E Sbjct: 52 SRQALTDRVPSPQQESHCPPEEEAGREHSEAEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDRESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAADWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLIPMEELQGLEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHE 399
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A6H5JD10_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD10_9PHAE) HSP 1 Score: 525 bits (1353), Expect = 2.150e-169 Identity = 268/379 (70.71%), Postives = 299/379 (78.89%), Query Frame = 1 Query: 13 SSRALADRVHSTRHDAVGARPIGARPGESEVDAPSFFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLTPMEELQGVEV---------------------------------AHRILSLTAEYMELVKRFPASMVSIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIV 1050 S +AL DRV + ++ A SE D FFER+G P++IAAPMVEQSEAAFRYLVRRHGC LAYTQM+H+EKFAPDNA KFR +RFDGVDD+EDRPLI QFCGN+P TVVRAARHVEH+CDAVDLNLGCPQ IA+KGNYGA+LL NPQLCEDIV+AMSRELS+PVTVKIR Q+K+SDTLDLARRLEGAGAQLLTVHGRT++S+KT QGAANWDII KVK IPVVANGG+ET ADAERLLEETGADAVMSSEGLLE+P LFDR L P+EELQGVEV AHRILS T EYMELVK +PA M+SIKGHLFKML+RLLECHHDLR RL H+ CDA+EADVI+ Sbjct: 52 SRQALTDRVPIPQQESHCPPEEEAGRERSEADPRGFFERIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKDSDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVAGIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRDLIPIEELQGVEVRRVSSFSCYSARRTPRMFFTCLTINAGLPGPQVAHRILSFTTEYMELVKLYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYHCDAMEADVIM 430
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A836CKE0_9STRA (tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE0_9STRA) HSP 1 Score: 363 bits (933), Expect = 3.970e-119 Identity = 182/299 (60.87%), Postives = 226/299 (75.59%), Query Frame = 1 Query: 118 FFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLTPMEELQGVEVAHRILSLTAEYMELVKRFPASMVS--IKGHLFKMLFRLLECHHDLRGRL 1008 F++ +GSP ++AAPMVEQSE AFR L RRHGCDLAYTQM+H+++F+ A KFR G D QEDRPLI QFCGNDP +V+AAR+VEH+ +A DLNLGCPQ IA+KGNYGA+LL LCE ++ AM+ +L+ PVTVKIR +T+ LA RLEGAG QL+TVHGRT+ S KT G A+W II +VK A+ IPVVANGG+ET ADAER L TGADA+MSSE LLEDP LFDRSL + E+ G +A R L+L EY++LV+ +P ++ + ++ HLFKML RLL CH DLRGRL Sbjct: 1 FYKAIGSPTYVAAPMVEQSEKAFRLLCRRHGCDLAYTQMLHAQQFSMLKAAKFRCVCCGGEDPQEDRPLIAQFCGNDPELLVKAARYVEHQVEACDLNLGCPQQIAKKGNYGAYLLPQGDLCERLIDAMASQLACPVTVKIRCLSTVEETVKLALRLEGAGVQLITVHGRTVRSAKTDNGPADWSIIREVKAALRIPVVANGGIETFADAERCLALTGADAIMSSEALLEDPALFDRSLPGLHEVSGAALAQRQLALAGEYLQLVQLYPPAIGAGPVRAHLFKMLHRLLGCHTDLRGRL 299
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A7S2C8F7_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8F7_9STRA) HSP 1 Score: 328 bits (840), Expect = 3.570e-103 Identity = 195/425 (45.88%), Postives = 248/425 (58.35%), Query Frame = 1 Query: 16 SRALADRVHSTRHDAVGARPIGARPGESEVDAPSFFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGV--DDQ-----EDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLTPMEELQGVE-----------------------VAHRILSLTAEYMELVKRFPASMV--SIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIVREMCGRYFFDPDARVPLEGVFD----------TSDLRVSPKQWYRRHR 1164 +RAL S H R + AR D F ER+G P+F+AAPMV QS+ AFR LVRRHG DLA+TQM+H++ FA ++R FDG DDQ EDRPLI QFCGNDP TVV AA +++ DA+DLNLGCPQ IA+KG YGAFLLS P L IV M+ L +P+TVKIR+ + +T+ A L+ AGA ++TVHGRT+ K + A+W ++ V+ A++IPVVANGG+ET +DA R L ETGAD VMSSE LLE+PGLF ++ ++L G E VA R LS EY+ L FPA V + KGH FKML+RLLE H D+R RL A +D I + RY R+P+E D ++ L V+ K WYRRHR Sbjct: 24 ARALIRTSTSHPHPRCFRRHLAARADAQPTDGSPFLERLGHPKFVAAPMVGQSDLAFRLLVRRHGADLAFTQMLHAKNFA--TVPRYREDNFDGFLRDDQSTYAMEDRPLIAQFCGNDPGTVVEAASYIQDHVDAIDLNLGCPQKIAKKGRYGAFLLSEPVLVRSIVERMATSLDVPITVKIRMLPTKEETVQFACMLQDAGAAMVTVHGRTVKQNKNLSERADWSVVRAVREALTIPVVANGGIETTSDALRCLVETGADMVMSSEALLENPGLFQQNTDHSQDLVGSEGGALNGGTSRSEMDYSEWCEAQLVAARQLSYMREYIALSTLFPARDVIGTTKGHAFKMLYRLLEVHTDVRERLVRMRNLADLSD-ITDTLAARY------RLPVEASPDELRGFRCDDQSTPLHVAAKTWYRRHR 439
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: W7TKF8_9STRA (Dihydrouridine synthase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF8_9STRA) HSP 1 Score: 304 bits (779), Expect = 4.950e-93 Identity = 175/381 (45.93%), Postives = 233/381 (61.15%), Query Frame = 1 Query: 127 RVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGV----DDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLF------------DRSLTPMEELQGVEVAHRILSLTAEYMELVKRF--PASMVSIKGHLFKMLFRLLE--CHHDLRGRLAHWECDAVEADVIVREMCGRYFFDPDARVPLEGVFDTSDLRVSPKQWYRRHRRNKAA*LMGSKALCV 1209 R+G+PR+IAAPMV+QS+ AFR LVRR+G DLAYTQM H+ FA N + +R + +DG+ ++ DRPLI QF G+ +VRAA ++H+ DAVDLNLGCPQ IA++G+YGA+LL L ++S M + L++PVT KIR+ E DTL+L + +E AG LLT+HGRT K G A+W I K+K A IPVVANGGVET DA TGADAVMSSEGLLE+P LF R + E++ +AHR L+ EY+EL K+F + ++KGHLFKML+ +LE ++DLR +L + + +V+E+ + D + L T VSP WYRRHR A L K LCV Sbjct: 125 RLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFA--NVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVL-----TKGAIVSPVSWYRRHREGHALALQRVKQLCV 498
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A8K1CA77_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA77_PYTOL) HSP 1 Score: 295 bits (754), Expect = 3.500e-91 Identity = 178/361 (49.31%), Postives = 220/361 (60.94%), Query Frame = 1 Query: 118 FFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLTPMEELQGVEVAHRILSLTAEYMELVKRFPASMVSIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADV-IVREMCGRYFFDPDARVPLEGVFDTSDLRVSPKQWYRRHRRNKAA*LMGSK 1197 FF +GSP+ + APMV+QSE AFR L RRHG +L YT M HS FA + ++RAK F+ +DRPLI QFCGNDP TV+ AARHVE CDAVDLNLGCPQ IARKG YG+FL+ DIV+ +S+ LSIPVTVKIR+ +TL+ A ++ AGA LL VHGRT KT A+WDII ++K +SIPV+ANGG+E D ER L+ T AD VMSSE +LE+P LF S VE+A + L T EY PAS I+ HLFK++F+ L H DLR LA + +A V IV E+ R A P E +TS WYRRHRR++ L K Sbjct: 29 FFRAIGSPQRVVAPMVDQSELAFRMLTRRHGAELCYTPMFHSRLFA--ESAEYRAKMFEKH--IKDRPLIVQFCGNDPQTVLAAARHVEGHCDAVDLNLGCPQGIARKGRYGSFLMKEKDTVRDIVTTLSQNLSIPVTVKIRIFPDRQETLEFADMIQAAGADLLCVHGRTKEMNKTAVKEADWDIIREIKERLSIPVIANGGIELPEDVERCLQVTKADGVMSSEAILENPALF--STDKEASYSFVEMAKQYLDATLEYP------PASDKIIRAHLFKIIFQDLCVHTDLRTDLA--KAPNRDAMVKIVEELEKRL-----AEKPGEYKVETS--------WYRRHRRSQEKLLQREK 362
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A3R7YT01_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YT01_9STRA) HSP 1 Score: 292 bits (748), Expect = 2.820e-90 Identity = 169/353 (47.88%), Postives = 215/353 (60.91%), Query Frame = 1 Query: 118 FFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLF-DRSLTPMEELQGVEVAHRILSLTAEYMELVKRFPASMVSIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIVREMCGRYFFDPDARVPLEGVFDTSDLRVSPKQWYRRHRRNK 1173 F+ +GSP+ I APMV+QSE AFR L R G D YT M+HS F + ++R K F+ +DRPLI QFCGNDP TV+ AA+ VE CDAVDLNLGCPQ IARKG+YG+FL+ + + IV +SR L+IPVTVKIRV +++TL+ A LE AG LLTVHGRT KT NWDII ++K +SIPV+ANGG+ET D R LE TG D VMSSEGLLE+P LF D + P ++ +++A + L Y PA+ ++ HLFKMLF+ L H DLR LA + D IV E+ R D + E T + S WYRRHR+ + Sbjct: 18 FYRAIGSPKRIVAPMVDQSELAFRMLCRTLGADCCYTPMLHSRLFT--ESVEYREKMFEHH--LQDRPLIVQFCGNDPKTVLMAAKMVESHCDAVDLNLGCPQGIARKGHYGSFLMHDKNTVKSIVETLSRGLTIPVTVKIRVFNDDNETLEFAEMLEKAGCDLLTVHGRTKEMNKTAVQEVNWDIIRRIKERLSIPVIANGGLETHEDIARCLEATGCDGVMSSEGLLENPALFADSNNKPGQDTSFLQLARQYLEYATLYP------PANDKIVRAHLFKMLFQDLRVHSDLRDALAAAKSQKEMVD-IVDELAVRLKKAEDDKATSEIKKTTYAMETS---WYRRHRQGQ 356
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: K3WW65_GLOUD (tRNA-dihydrouridine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW65_GLOUD) HSP 1 Score: 290 bits (743), Expect = 1.890e-89 Identity = 163/354 (46.05%), Postives = 222/354 (62.71%), Query Frame = 1 Query: 118 FFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLF-DRSLTPMEELQGVEVAHRILSLTAEYMELVKRFP-ASMVSIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIVREMCGRYFFDPDARVPLEGVFDTSDLRVSPKQWYRRHRRNK 1173 FF +G+P+ I APMV+QSE AFR L R+HG +L YT M HS FA A +R K F+ +DRPLI QFCGNDP+TV+ AA+HVE CDAVDLNLGCPQ IARKG YG+FL+ + +IV +S LSIPVTVKIR+ E +TL+ L+ AG +L VHGRT KT+ NWDII ++K ++IPV+ANGG+E D ER LE T AD VM+SE +LE+P + + + TP ++ +E+A +YME ++FP A+ ++ HLFK+LF+ L H DLR LA + A + D I++E+ GR + + P + + + WYRRHR+ + Sbjct: 21 FFHAIGAPKRIVAPMVDQSELAFRMLTRKHGAELCYTPMFHSRLFAESPA--YREKMFE--QHIQDRPLIVQFCGNDPATVLAAAKHVEGHCDAVDLNLGCPQGIARKGRYGSFLMKEKDVVREIVQTLSDNLSIPVTVKIRMFPDEQETLEFCDMLQAAGCDMLVVHGRTKEMNKTLVREVNWDIIRQIKERLTIPVIANGGIEFPEDIERCLEATKADGVMTSEAILENPAILAETNNTPGKDTSFLELAK-------QYMEFAQQFPPANEKIVRAHLFKILFQDLRVHTDLRDLLAAVKTRA-QMDDILKELEGRLRKE-ELDAPAGEKQWSKVVYAAETSWYRRHRKGQ 361
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A2D4BU30_PYTIN (Dus domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU30_PYTIN) HSP 1 Score: 290 bits (743), Expect = 2.570e-89 Identity = 168/352 (47.73%), Postives = 209/352 (59.38%), Query Frame = 1 Query: 118 FFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLTPMEELQGVEVAHRILSLTAEYMELVKRFPASMVSIKGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIVREMCGRYFFDPDARVPLEGVFDTSDLRVSPKQWYRRHRRNK 1173 FF +GSP+ + APMV+QSE AFR L R HG +L YT M HS F+ + ++RAK F+ DRPL+ QFCGNDP TV+ AARHVE CDAVDLNLGCPQ IARKG YG+FL+ + IVS +S LSIPVTVKIRV +TL+ L+ AG LL VHGRT KT +WDII ++K ++IPV+ANGG+E D +R LE TG D VMSSE +LE+P LF E +E+A + L EY PAS IK HLFK+LF+ L H DLR LA + + IV E+ R DA P+ +TS WYRRHR+ + Sbjct: 46 FFRAIGSPKRVVAPMVDQSELAFRMLTRHHGAELCYTPMFHSRLFS--ESAEYRAKMFEKH--MNDRPLVVQFCGNDPQTVLAAARHVEAHCDAVDLNLGCPQGIARKGRYGSFLMKEKDVVRSIVSTLSENLSIPVTVKIRVFPDRQETLEFCDMLQSAGCDLLVVHGRTKEMNKTAVREVDWDIIREIKQRLTIPVLANGGIEVPEDVDRCLEATGCDGVMSSEAILENPALFGS-----ERPSFMEMAKQYLDFAREYP------PASEKIIKAHLFKILFQDLRVHTDLRTELAK-SPNRDDMARIVAELDAR--LSSDAFPPVVYSAETS--------WYRRHRKGQ 371
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Match: A0A024G6H1_9STRA (tRNA-dihydrouridine synthase n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G6H1_9STRA) HSP 1 Score: 287 bits (734), Expect = 2.080e-88 Identity = 166/355 (46.76%), Postives = 215/355 (60.56%), Query Frame = 1 Query: 118 FFERVGSPRFIAAPMVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQEDRPLITQFCGNDPSTVVRAARHVEHKCDAVDLNLGCPQNIARKGNYGAFLLSNPQLCEDIVSAMSRELSIPVTVKIRVQEKESDTLDLARRLEGAGAQLLTVHGRTIASKKTIQGAANWDIIGKVKNAVSIPVVANGGVETRADAERLLEETGADAVMSSEGLLEDPGLFDRSLT--PMEELQGVEVAHRILSLTAEYMELVKRFPASMVSI-KGHLFKMLFRLLECHHDLRGRLAHWECDAVEADVIVREMCGRYFFDPDARVPLEGVFDTSDLRVSPKQWYRRHRRNK 1173 FF +GSP+ I APMV+QSE AFR L R HG L YT M HS FA ++++R++ F+ DRPLI QFCGNDP T+V AA++VE CDAVD+NLGCPQ IARKGNYGAFL+ + IV + E+++PVT KIRV E++T++ + LE AG LL VHGRT K G NW+II K+KNA+SIPV+ANGG+ET D LE TGAD VMSSE +L +P LFD+SL P+ + L EYM+ V +P + I + HLFK+LF L H DLR LA + E +++ + R +A V E + S WYRRHR+N+ Sbjct: 9 FFRSIGSPQRIVAPMVDQSELAFRMLCREHGAQLCYTPMFHSRLFA--ESQEYRSRMFE--QHVRDRPLIVQFCGNDPETMVTAAKYVEGHCDAVDINLGCPQGIARKGNYGAFLMKDKARVCGIVEKLVDEVAVPVTCKIRVFPDEAETIEFTKMLEKAGCDLLVVHGRTKEMNKGTVGQVNWEIIKKIKNALSIPVIANGGIETPEDIAECLEVTGADGVMSSEAILGNPALFDKSLQFGPLHQKGPC-----YFDLANEYMDFVTTYPTGNLKIVRAHLFKLLFEDLTHHTDLRSALASANTFS-EMKHLLQVLGDR----KNAPVKYEYTLENS--------WYRRHRKNR 341 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig56.13921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig56.13921.1 >prot_L-elsbetiae_contig56.13921.1 ID=prot_L-elsbetiae_contig56.13921.1|Name=mRNA_L-elsbetiae_contig56.13921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=341bp MVEQSEAAFRYLVRRHGCDLAYTQMIHSEKFAPDNARKFRAKRFDGVDDQback to top mRNA from alignment at L-elsbetiae_contig56:16265..21863+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig56.13921.1 ID=mRNA_L-elsbetiae_contig56.13921.1|Name=mRNA_L-elsbetiae_contig56.13921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5599bp|location=Sequence derived from alignment at L-elsbetiae_contig56:16265..21863+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig56:16265..21863+ >mRNA_L-elsbetiae_contig56.13921.1 ID=mRNA_L-elsbetiae_contig56.13921.1|Name=mRNA_L-elsbetiae_contig56.13921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2046bp|location=Sequence derived from alignment at L-elsbetiae_contig56:16265..21863+ (Laminarionema elsbetiae ELsaHSoW15)back to top |