mRNA_L-elsbetiae_contig5575.13888.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: D7G7R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R8_ECTSI) HSP 1 Score: 486 bits (1251), Expect = 2.410e-167 Identity = 255/283 (90.11%), Postives = 267/283 (94.35%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANLVIAKKAAAATTASEAK 849 +VGMEVWSVLGLSLL+DGYVLVKTFE IW+SKPK+LS K HL LRDPTTLAVLLEDGAACVGVLMAM GIGLSQYYQ P+FDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVD+ET EGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKL+LNTR YGQEFRQLLAR DDK K+KDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHN+FALEQFQTPALR+VEETTL QM ANLVIAKKAAAA TA++AK Sbjct: 187 KVGMEVWSVLGLSLLVDGYVLVKTFESIWQSKPKNLSLKKHLTNLRDPTTLAVLLEDGAACVGVLMAMSGIGLSQYYQAPVFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDSETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTR--YGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAAVTAAQAK 467
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A6H5J9P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P9_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 1.580e-137 Identity = 224/279 (80.29%), Postives = 240/279 (86.02%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQV---YGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANLVIAKKAAAA 828 +VGMEVWSVLGLSLL+DG+VLVKTFEGIW+SKPK+LS K HL LRDPTTLAVLLEDGAACVGVLMAM GIGLSQYYQ P+FDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVD+ET EGIKAILMSRGSIEQLHQ + G + T +A L L++ + YGQEFRQLLAR DDK K+KDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHN+FALEQFQTPALR+VEETTL QM ANLVIAKKAAAA Sbjct: 250 KVGMEVWSVLGLSLLVDGFVLVKTFEGIWQSKPKNLSLKKHLTNLRDPTTLAVLLEDGAACVGVLMAMSGIGLSQYYQAPVFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDSETTEGIKAILMSRGSIEQLHQARCNHSGWGRTLLPSRPR--STSMAPSLLLSSSSIQGTYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAA 526
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A7S3V4S7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4S7_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.010e-78 Identity = 141/267 (52.81%), Postives = 180/267 (67.42%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANL 801 + VW VLG+S +DGYV KT + E+KP+ S NH++ LRDP TLA+LLED AC+GVL+A+GGIG +QYYQ P+FD+LAGV I+GLL MGL+L +VN +FL+GQSVD E +G++ ILM R SI+ +H VQSQW G TF+FKAEVDFDGTFLAAKL Y EF Q A T +D LLS+Y EDVMR EREVR E EIR++YP A YIELEP S + A++ +L+++E L + L +L Sbjct: 400 DISWHVWGVLGMSFAVDGYVFTKTLMEVRETKPEGTSLLNHVRNLRDPATLAILLEDAGACLGVLIAIGGIGATQYYQMPVFDALAGVGISGLLASMGLILVKVNHKFLLGQSVDKEIRQGVEKILMERRSIDNVHSVQSQWTGPDTFSFKAEVDFDGTFLAAKLMPR----YQLEFAQASA------TLDQDLRVLLSWYAEDVMRTVEREVRNIENEIRREYPGAQYIELEPMSKDADRLAIDDGLEASLKRIEIEALNRYLRSL 656
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A836CEW4_9STRA (Cation efflux family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW4_9STRA) HSP 1 Score: 247 bits (630), Expect = 7.630e-76 Identity = 134/263 (50.95%), Postives = 182/263 (69.20%), Query Frame = 1 Query: 4 VGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQML 792 VG E W VL +SL +DGYVL ++ + I ++ +SF HLKK+RDP TL++L EDGAAC+GVL A GIGLSQYYQNP++D+L GV +AGLLG +G L V+ +LIG+SVD++TV+GI AILM+R IE + VQSQ++G +TF++KAE+DFDGT+LAA+L + Y F L +S D + LL+ Y EDV R EREV+ AE IR+ YPEAA+IELEPDSS + FA+E F + + E +++M+ Sbjct: 80 VGPETWGVLAVSLAVDGYVLHRSVQQINATRKPGVSFLAHLKKVRDPATLSILFEDGAACLGVLTAAAGIGLSQYYQNPVYDALGGVVVAGLLGCVGYALANVSYGYLIGKSVDSDTVDGIYAILMARPGIENVKSVQSQYIGPYTFSYKAEIDFDGTYLAAQLIPH----YESLFNDL--KSASDPAS--ELHVLLALYAEDVARVIEREVKAAEAAIRETYPEAAFIELEPDSSKTDKFAVEDFHLASFKSQEVQDVRKMM 334
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A7S1DBT2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBT2_CYCTE) HSP 1 Score: 240 bits (612), Expect = 7.970e-74 Identity = 133/267 (49.81%), Postives = 175/267 (65.54%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANL 801 ++ EVW+VLG+SL++DGYV KT + E PK + H+ LRDP TLA++LEDGAAC+GV++A GI S P++D LAG I+ +L MG+VL VN RFL+GQ+VD + EGI+ IL+ R SI+ + VQSQW G TF+FKAEVDFDGTFLAAKL Y EF ++ S+D + + LLS+Y EDVMR EREV+E E EIRK+YP A YIELEP S + FA++ T LR++E L + L +L Sbjct: 34 RISWEVWTVLGVSLVVDGYVFGKTVMEVREYMPKGSTLWKHVWSLRDPATLAIILEDGAACLGVMIACAGIFASHATGMPVYDGLAGCGISAVLAAMGIVLVRVNHRFLLGQAVDKDITEGIEKILLLRRSIDNVQSVQSQWTGPETFSFKAEVDFDGTFLAAKLMPR----YQNEFLEV-GDSLDSELR-----VLLSWYAEDVMRTVEREVKEIEAEIRKRYPGAEYIELEPMSKDSDRFAIDDGMTGQLRRIEVEALNRYLKSL 290
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: B8C824_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C824_THAPS) HSP 1 Score: 248 bits (633), Expect = 2.110e-73 Identity = 145/272 (53.31%), Postives = 180/272 (66.18%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLS----FKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDK-TKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANL 801 +V MEVW VLG+S +DGYV KT +G+ S D +K K+RDP TLAVLLEDGAAC+GV++A+GGIG++QY P+FD LAG+ I+ LLGVMG+ L VN RFLIGQ +D T E I+ I++SR SI+ ++ VQSQW G TF++KAEVDFDGTFLAAKL Y QEF D K T +D LLS+Y EDVMRAAEREVR E EIR KYP A YIELEP S + +A++ LR+VE L + L +L Sbjct: 350 EVPMEVWGVLGMSFAVDGYVFGKTVQGVKASMRIDGDGGSFWKYATTKVRDPATLAVLLEDGAACLGVVLAIGGIGMTQYTGMPVFDGLAGMGISALLGVMGMALVSVNHRFLIGQGLDKATREDIEKIILSRRSIDNVYSVQSQWTGPDTFSYKAEVDFDGTFLAAKLMPR----YQQEF-------FDAKHTLDRDLRVLLSWYAEDVMRAAEREVRHIEEEIRLKYPSAQYIELEPMSKDADRYAIDDGMEAQLRRVEIEVLNRYLKSL 610
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A7S1ZLR1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLR1_9STRA) HSP 1 Score: 244 bits (624), Expect = 2.640e-72 Identity = 134/267 (50.19%), Postives = 178/267 (66.67%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANL 801 +V E+W+VLG+S +DGYVL KT + + P ++ +H+KK+RDP TLAVLLEDGAAC+G++MA+ GI P+FD +AG+ I+GLL MGL+L VN RFL+GQ VD + V GI+ +L++ SI+ +H VQSQW G TF+FKAEVDFDGTFLAAKL Y +EF L AR+ D+ D LLS+Y EDVMRA EREV E EIR++YP A YIELEP + FA++ LR++E +L + L +L Sbjct: 268 EVTWEIWAVLGVSFGVDGYVLYKTIKEVKSEMPSNIKLWDHVKKIRDPATLAVLLEDGAACLGIVMAIAGISAVHATSMPVFDGIAGLGISGLLASMGLILVRVNHRFLLGQGVDQDIVTGIEKMLLTHRSIDHVHSVQSQWTGPETFSFKAEVDFDGTFLAAKLMPR----YQKEF--LEARNTLDQ----DLRVLLSWYAEDVMRAVEREVHHIEAEIRREYPGAEYIELEPMGKDADKFAIDDGMEAELRRIEIESLNRYLKSL 524
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A7S2M4U9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4U9_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.490e-71 Identity = 137/275 (49.82%), Postives = 182/275 (66.18%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESK-------PKDLSFKNHLK-KLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANL 801 +V EVW VLG+S ++DGYV KT +G+ S K++SF + K+RDP TLAVLLEDGAAC+G+++A+GGIG++QY P+FD +AG+SI+ LLGVMG+ L VN R+LIG VD T E I+ I++ R SI+ +H +Q+QW G TF++KAE+DFDGTFLAAKL Y QEF S+D +D LL++Y EDVMRA ERE+R E EIRKKYP A YIELEP S + +A++ LR+VE L + L +L Sbjct: 383 EVPWEVWGVLGMSFVVDGYVFSKTVQGVRASMRIDGGQDTKNMSFWTYATTKVRDPATLAVLLEDGAACLGIVLAIGGIGMTQYTGLPIFDGMAGISISALLGVMGIALVSVNHRYLIGHGVDRATREDIEQIILGRRSIDNVHAIQTQWTGPDTFSYKAEIDFDGTFLAAKLMPR----YQQEFFDA-KESLD-----RDLRVLLAWYAEDVMRAVEREIRHIEEEIRKKYPAAQYIELEPMSKDADRYAIDDGMKAQLRRVEIEVLNRYLKSL 647
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A7S3DWK0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWK0_9STRA) HSP 1 Score: 235 bits (599), Expect = 5.220e-71 Identity = 137/280 (48.93%), Postives = 181/280 (64.64%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANLVIAKKAAAATTAS 840 ++ +VWSVL SLL+DGYV +KT + SKPK +S NHL +LRDP LA+LLEDGAAC+G+L+A+ GI + +P+FD +AGV I+GLLG MG L +N RFL+GQ+VD E + I IL SR ++ + VQSQW G TF++KAEVDFDGT +AA+L T + Y EF ++ ++D + K LL+ Y EDVMRA EREVR E IRKKYP A YIELEP S + A++ LR+VE +L + L +L +KAA AS Sbjct: 95 EITWQVWSVLYFSLLVDGYVFLKTVSQVHRSKPKHISLWNHLNRLRDPAILAILLEDGAACLGILIALAGISATHATGDPIFDGVAGVGISGLLGGMGFALGRMNYRFLLGQAVDKEITDDIAKILTSRQKVDGIGSVQSQWTGPDTFSYKAEVDFDGTSIAAELM--TVRDYQNEFLKI-KDTMDSELKI-----LLALYAEDVMRAVEREVRIVEAAIRKKYPGAEYIELEPMSVDAHRLAIDDNFEAELRRVEGESLDRYLKSLRDEEKAAQEKEAS 366
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Match: A0A7S4JAV4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV4_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.420e-70 Identity = 137/271 (50.55%), Postives = 174/271 (64.21%), Query Frame = 1 Query: 1 QVGMEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVLLEDGAACVGVLMAMGGIGLSQYYQNPMFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDTETVEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRQVYGQEFRQLLARSIDDKTKFKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPALRQVEETTLKQMLANLVIAK 813 +V VWSVLGLS +DGYVL KT G+ P F +++ +RDP TLA+LLEDGAAC+GV++A+ GIG + Y P+FD LAGV+I+GLL MGL L VN RFL+GQ+VD GI+ IL R SIE ++ VQSQW G TF++KAEVDFDGTFLAAK+ Y +EF L AR D D LLS+Y EDVMR EREVR+ E +IR+ YP A +IELEP S N FA++ L+++E L L+ L +K Sbjct: 466 EVTWHVWSVLGLSFAVDGYVLWKTVAGLRVDAPDGTPFWTYVRNMRDPATLAILLEDGAACLGVVIAIAGIGATSYSGMPVFDGLAGVTISGLLAAMGLALVRVNHRFLLGQAVDPVITRGIEDILTGRSSIENVYSVQSQWTGPDTFSYKAEVDFDGTFLAAKIMPR----YQREF--LEARDTLDS----DLRVLLSWYAEDVMRTVEREVRDIEADIREAYPGAEFIELEPMSKDSNRFAIDDGMEAQLKRIETDALNHFLSRLYKSK 726 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5575.13888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5575.13888.1 >prot_L-elsbetiae_contig5575.13888.1 ID=prot_L-elsbetiae_contig5575.13888.1|Name=mRNA_L-elsbetiae_contig5575.13888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp MEVWSVLGLSLLIDGYVLVKTFEGIWESKPKDLSFKNHLKKLRDPTTLAVback to top mRNA from alignment at L-elsbetiae_contig5575:2611..11944- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5575.13888.1 ID=mRNA_L-elsbetiae_contig5575.13888.1|Name=mRNA_L-elsbetiae_contig5575.13888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9334bp|location=Sequence derived from alignment at L-elsbetiae_contig5575:2611..11944- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5575:2611..11944- >mRNA_L-elsbetiae_contig5575.13888.1 ID=mRNA_L-elsbetiae_contig5575.13888.1|Name=mRNA_L-elsbetiae_contig5575.13888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig5575:2611..11944- (Laminarionema elsbetiae ELsaHSoW15)back to top |