mRNA_L-elsbetiae_contig5475.13739.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5475.13739.1
Unique NamemRNA_L-elsbetiae_contig5475.13739.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: D7G851_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G851_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 5.650e-185
Identity = 314/434 (72.35%), Postives = 346/434 (79.72%), Query Frame = 3
Query:  195 NSAYPRARGVLPTDYTGGGDGGNSTTWTSLPLETPTFGAGALPRNGSGVAAANGGPPVGYADYSPLDYSSS--WQQMPKGL--VDAGVD-STGSLGGA------------GGAIGSKQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARR-RQAPVVRHKRRNSGT---LPSENGGG-GGEGISSGFV 1430
            ++AYPRAR  LP D     D  +S++    P     FG+     + SG       P   YA Y+PL++S+S  WQQ   G   VD G + S   +GG+            GG++  +QSKTYR+AVKRT++SIALSC FGL TMLFRG+QSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRG+MIAFGVAAVKRF+WITVVFAAILLVSSYKLLVE+E+EDHDLSQNTLVRMSK+LVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQ   DPF+VF+SNLFAIMGLRSIYVIIAQ VS LPYLKPAVALVLGFVGCKMLLEY+HI ISTGWSL VVLSLI GGV LSL+ARR R+APVVRHKRR SG    LP+ NG   GG G  SGFV
Sbjct:    2 SNAYPRARSALPPDQGMVADNRSSSSSACAPAHM-AFGS-----SSSGATCVKSAP---YA-YNPLEHSTSLGWQQSLMGATDVDLGAEPSAADIGGSSHGGRAVHNNLDGGSM-PQQSKTYRMAVKRTVMSIALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQ---DPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLPARNGNEEGGAGDFSGFV 421          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A6H5LI88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI88_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 1.480e-143
Identity = 237/292 (81.16%), Postives = 249/292 (85.27%), Query Frame = 3
Query:  639 SVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARS-----------------------DPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARR-RQAPVVRHKRRNSGT---LPSENGGGGG-EGISSGFV 1430
            SVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRG+MIAFGVAAVKRF+WITVVFAAILLVSSYKLLVE+E+EDHDLSQNTLVRMS++LVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQAR                        DPF+VF+SNLFAIMGLRSIYVIIAQ VS LPYLKPAVALVLGFVGCKMLLEY+HI ISTGWSL VVLSLI GGV LSL+ARR R+APVVRHKRR SG    LP+ NG G G  G  SGFV
Sbjct:   51 SVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSRRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARHIDLLPANFSWQMWLRMSHNTPSRDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDAPPLPARNGDGEGVAGDFSGFV 342          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 325 bits (832), Expect = 4.330e-103
Identity = 174/286 (60.84%), Postives = 225/286 (78.67%), Query Frame = 3
Query:  474 GGAIGSKQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARR 1331
            GG      ++ +R +V  T+  +AL+  FG     FRG+QSG EFFAGYLVEQSLSVDNLFVFLM F+YFQVPL +QGRVLTWGI+GA++MRGIMI  GVAAV++F  + ++FAAIL++S+ KL  E+ DE  DLS NT++R+SK  VGAV+EYDGD+FFT L G+ +  ATPLLLCLVCIELSDFVFAVDSIPAV+G+SQ   D  IV+SSN+FAIMGLRS+Y ++A+ V  LPYL+PAVALVL F+G KM++E+ H +IS   SL VV++L++ G+ LSL+ ++
Sbjct:    2 GGQAADVSAERFRQSVLSTVGCVALAVVFGAGVWHFRGRQSGFEFFAGYLVEQSLSVDNLFVFLMLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFES-DEPEDLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRR--ATPLLLCLVCIELSDFVFAVDSIPAVIGVSQ---DLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKK 281          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A7R9UD78_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD78_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.700e-101
Identity = 173/282 (61.35%), Postives = 220/282 (78.01%), Query Frame = 3
Query:  486 GSKQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAV-DEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVAR 1328
            G K +  +  A+ R  +S+A++C FG+ T+  +G+++GL +FA YLVEQSLSVDNLFVFLM F YF+VPL HQGRVLTWGIVGA+LMRG MIA GVAAV+ F W+ +VFAA+L+ SS K+L   E+E  DLS N +++MSKKL+G V D YDG++FFT  GG    VATPLLLCLVCIE+SDFVFAVDSIPAVLG+S    DPFIV++SN+FAI+ LRS+Y ++A+ V+ LPYLK AVALVL F+G KM+LE+  + I  G SL VVL L+ GGV LS++AR
Sbjct:   77 GRKGADRFYAALYRVCLSVAMACLFGVFTVFLKGREAGLAYFAAYLVEQSLSVDNLFVFLMLFAYFKVPLLHQGRVLTWGIVGAVLMRGFMIAVGVAAVQHFRWMILVFAAVLVFSSVKML-SGEEEQEDLSDNYIIKMSKKLLGTVTDRYDGEKFFTEQGG--AKVATPLLLCLVCIEISDFVFAVDSIPAVLGVSH---DPFIVYTSNIFAIIALRSLYTLVARAVNDLPYLKHAVALVLFFIGVKMVLEFFGVDIGIGTSLTVVLLLLVGGVVLSMIAR 352          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA)

HSP 1 Score: 320 bits (819), Expect = 1.460e-100
Identity = 165/293 (56.31%), Postives = 227/293 (77.47%), Query Frame = 3
Query:  492 KQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARRRQAPVVRHKRRNS 1370
            K S+ Y++AV +T +++A +  FG  T + +GQ++G+EF+AGYLVEQSLSVDNLFVFLM FDYF+VPL +Q R LTWGI+GA+ MR +MI  GVAA+++F  + ++FA ILL SS+KL  E E+ D DLS N ++++S K+  +VD YDG++FFT++ G     ATPLL+CLVCIELSDFVFAVDSIPAV+G+++   DPFIV+SSN+FAIM LRS+YV++AQ V+ LPYL+PAVALVL FVG KM+ E+ H ++ST  SL VV +++ GG+ALS+V  + +A  V+    +S
Sbjct:   78 KGSRAYKMAVLKTCIAVASAAVFGAGTWVVKGQKAGMEFYAGYLVEQSLSVDNLFVFLMLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFE-EEGDEDLSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRH--ATPLLMCLVCIELSDFVFAVDSIPAVIGVTK---DPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAKAAAVKQMSMSS 364          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A7S2E636_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E636_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.130e-99
Identity = 172/284 (60.56%), Postives = 220/284 (77.46%), Query Frame = 3
Query:  468 GAGGAIGSKQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSL 1319
            GA G I S++++ +R +V  T++ +A +  FG    + +G++SG EFFAGYLVEQSLSVDNLFVFLM F+YFQVPLE QGRVLTWGI+GA+LMRG+MI  GVAA++RF  + ++FAAILLVS+ KL  E+ DE  DLSQN +++ SK   GAVDEYDG++F T +  + +  ATPLLLCLVCIELSDFVFAVDSIPAV+G+SQ   D  +V+SSNLFAIMGLRS+Y ++A+ V  L YL+PAVALVL F+  KMLLE+ H +I    SLLVV  L++GG+ LSL
Sbjct:    2 GAEGQIKSQEARRFRSSVIYTVLIVAAAAAFGSGIWVVKGRRSGFEFFAGYLVEQSLSVDNLFVFLMVFNYFQVPLECQGRVLTWGIIGAVLMRGVMITIGVAAIQRFRSVILIFAAILLVSAVKLFFES-DEPQDLSQNVVMKFSKFCTGAVDEYDGEKFITVVNNRRR--ATPLLLCLVCIELSDFVFAVDSIPAVIGVSQ---DALVVYSSNLFAIMGLRSLYTLVAKAVEDLAYLRPAVALVLCFISIKMLLEFFHYEIPIHLSLLVVALLLAGGIVLSL 279          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.200e-99
Identity = 170/270 (62.96%), Postives = 210/270 (77.78%), Query Frame = 3
Query:  558 FGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARRRQAPVV---RHK 1358
            FGL TM  +G+QSGLEFFAGYLVEQSLSVDNLFVF+M F+YF+VP  +QGRVLTWGI+GA+ MR +MI  GVAA++RF  + + FAAILL SS KLL E EDED DLS N ++R+SK  V + D+Y+G++FFT + G  K +ATPLLLCLVCIELSDFVFAVDSIPAVLG+S+   D FIV+SSN+FAI+ LRS+Y +++  ++ LPYLKP+VALVLGFVG KM  EY H +I  G SL VV  L+SGGV  S+   RR+A +    RHK
Sbjct:    8 FGLGTMAVKGRQSGLEFFAGYLVEQSLSVDNLFVFIMLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGDLSNNIVLRISKFFVRSTDKYEGEKFFTVVDG--KKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSK---DTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRRARLGLSGRHK 272          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 7.420e-97
Identity = 160/279 (57.35%), Postives = 212/279 (75.99%), Query Frame = 3
Query:  501 KTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDE--DHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARR 1331
            + Y  AV+RTL+++  +  FG       G+Q  +EFFAGYL+E+SLSVDN+FVF+M F+YF+VP+E+Q R L+WGI+GA+ MRGIMI  GVAA++RF W+ ++FA +LL S++KLL E   E  + DLS N LV  +KKLV AVDEYDGD FFTR  G  K  ATPL +CL+CIELSDFVFAVDSIPAVLG+S+   DP IV+SSN+FAIM LRS+Y ++A  V++L Y+KP+VALVL FVG KM+ E+ H+++    SL VV+SL+ GG+ LSL+ +R
Sbjct:  103 EAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNG--KRYATPLFMCLICIELSDFVFAVDSIPAVLGVSK---DPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQR 376          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN)

HSP 1 Score: 307 bits (787), Expect = 2.060e-96
Identity = 166/283 (58.66%), Postives = 217/283 (76.68%), Query Frame = 3
Query:  489 SKQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARRRQ 1337
            S ++  +R ++ +T+ ++A +  FGL+    RG+ S + FF+GYLVEQSLSVDNLFVF+M F+YF+VP   Q RVL+WGIVGAILMRG+MI  GVAAVKRF W +++FA ILL+SS KLL+E  DED D+  N ++R+S+KLVGA  EYDGDRFFT + G  +  ATPLLLCLVC+ELSD VFAVDSIPAVLGIS   +DPF+V+SSN+FAI GLR++Y ++A+ V ++ YLKPAV  VL F+  KM+LEY H  I TG SL VV+ L++ G A SL+A +R+
Sbjct:    4 SGEADNFRRSLVQTVWAVASATAFGLILWYARGRDSAIAFFSGYLVEQSLSVDNLFVFIMLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLMEG-DEDEDVGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKR--ATPLLLCLVCVELSDVVFAVDSIPAVLGIS---TDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASKRK 280          
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK)

HSP 1 Score: 308 bits (790), Expect = 7.710e-96
Identity = 158/281 (56.23%), Postives = 216/281 (76.87%), Query Frame = 3
Query:  498 SKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAVKRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARSDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKMLLEYMHIKISTGWSLLVVLSLISGGVALSLVARRRQA 1340
            SK Y+ AV +T++ +  +  FG  T   +G+Q+ LEFFAGYLVEQSLSVDNLFVF+M FDYF+VP++ Q RVLTWGI+GA+ MR +MI  GVAA+++F  +T++FA IL+ S YK++ E+E+E+ DL  N ++++S K+V +  +YDG++FFT++ G     ATPLL+CL+CIELSDFVFAVDSIPAV+G+++   DPFIV+SSNLFAI  LRS+Y ++A+ V  LPYLKPAVALVLGFVGCKM  EY H ++  G SL VV  L+ GG+  S++A+ + A
Sbjct:   94 SKEYKAAVIKTVLVVLAAIAFGAGTWAVKGRQASLEFFAGYLVEQSLSVDNLFVFIMLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESEEEE-DLEDNVIMKLSNKMVKSTTQYDGEKFFTKIDG--VKYATPLLMCLICIELSDFVFAVDSIPAVIGVTK---DPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKNKAA 368          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5475.13739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G851_ECTSI5.650e-18572.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LI88_9PHAE1.480e-14381.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RH37_9STRA4.330e-10360.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UD78_9STRA1.700e-10161.35Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2Y1S8_9STRA1.460e-10056.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2E636_9STRA1.130e-9960.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZA94_9STRA1.200e-9962.96Integral membrane protein TerC family-domain-conta... [more]
W7THX1_9STRA7.420e-9757.35Integral membrane protein TerC n=3 Tax=Monodopsida... [more]
F0Y6P3_AURAN2.060e-9658.66Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3XZU5_HETAK7.710e-9656.23Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5475contigL-elsbetiae_contig5475:5461..9279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score538.5
Seed ortholog evalue2.8e-150
Seed eggNOG ortholog2880.D7G851
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009791,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0055035,GO:0061024,GO:0071840,GO:0090351
EggNOG free text desc.membrane protein TERC
EggNOG OGs2QQNF@2759,COG0861@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1885
Cds size1251
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816574.5921013-UTR-L-elsbetiae_contig5475:5460..59121622816574.5921013-UTR-L-elsbetiae_contig5475:5460..5912Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5475 5461..5912 -
1691683657.7026138-UTR-L-elsbetiae_contig5475:5460..59121691683657.7026138-UTR-L-elsbetiae_contig5475:5460..5912Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5475 5461..5912 -
1622816574.6609607-UTR-L-elsbetiae_contig5475:9097..92791622816574.6609607-UTR-L-elsbetiae_contig5475:9097..9279Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5475 9098..9279 -
1691683657.7679667-UTR-L-elsbetiae_contig5475:9097..92791691683657.7679667-UTR-L-elsbetiae_contig5475:9097..9279Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5475 9098..9279 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816574.6023464-CDS-L-elsbetiae_contig5475:5912..62601622816574.6023464-CDS-L-elsbetiae_contig5475:5912..6260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 5913..6260 -
1691683657.7176583-CDS-L-elsbetiae_contig5475:5912..62601691683657.7176583-CDS-L-elsbetiae_contig5475:5912..6260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 5913..6260 -
1622816574.6128213-CDS-L-elsbetiae_contig5475:6524..67111622816574.6128213-CDS-L-elsbetiae_contig5475:6524..6711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 6525..6711 -
1691683657.7279932-CDS-L-elsbetiae_contig5475:6524..67111691683657.7279932-CDS-L-elsbetiae_contig5475:6524..6711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 6525..6711 -
1622816574.6233094-CDS-L-elsbetiae_contig5475:7444..75921622816574.6233094-CDS-L-elsbetiae_contig5475:7444..7592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 7445..7592 -
1691683657.7388659-CDS-L-elsbetiae_contig5475:7444..75921691683657.7388659-CDS-L-elsbetiae_contig5475:7444..7592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 7445..7592 -
1622816574.6380396-CDS-L-elsbetiae_contig5475:7832..79421622816574.6380396-CDS-L-elsbetiae_contig5475:7832..7942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 7833..7942 -
1691683657.749925-CDS-L-elsbetiae_contig5475:7832..79421691683657.749925-CDS-L-elsbetiae_contig5475:7832..7942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 7833..7942 -
1622816574.6485627-CDS-L-elsbetiae_contig5475:8639..90971622816574.6485627-CDS-L-elsbetiae_contig5475:8639..9097Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 8640..9097 -
1691683657.758851-CDS-L-elsbetiae_contig5475:8639..90971691683657.758851-CDS-L-elsbetiae_contig5475:8639..9097Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5475 8640..9097 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5475.13739.1prot_L-elsbetiae_contig5475.13739.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5475 5913..9097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5475.13739.1

>prot_L-elsbetiae_contig5475.13739.1 ID=prot_L-elsbetiae_contig5475.13739.1|Name=mRNA_L-elsbetiae_contig5475.13739.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp
MSRQNSAYPRARGVLPTDYTGGGDGGNSTTWTSLPLETPTFGAGALPRNG
SGVAAANGGPPVGYADYSPLDYSSSWQQMPKGLVDAGVDSTGSLGGAGGA
IGSKQSKTYRLAVKRTLVSIALSCCFGLVTMLFRGQQSGLEFFAGYLVEQ
SLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGIMIAFGVAAV
KRFEWITVVFAAILLVSSYKLLVETEDEDHDLSQNTLVRMSKKLVGAVDE
YDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQAR
SDPFIVFSSNLFAIMGLRSIYVIIAQLVSTLPYLKPAVALVLGFVGCKML
LEYMHIKISTGWSLLVVLSLISGGVALSLVARRRQAPVVRHKRRNSGTLP
SENGGGGGEGISSGFV*
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mRNA from alignment at L-elsbetiae_contig5475:5461..9279-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5475.13739.1 ID=mRNA_L-elsbetiae_contig5475.13739.1|Name=mRNA_L-elsbetiae_contig5475.13739.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3819bp|location=Sequence derived from alignment at L-elsbetiae_contig5475:5461..9279- (Laminarionema elsbetiae ELsaHSoW15)
CTACAAATACAAGGTCATTTCTTTTCCGGGGTTCCCCGGATAATCGTGGT GGTACCTAGCTACCCGTTTGTTCCGCCGCAGGCCATCCGGCTATGTTGTG TGATTTCGCTGGGCGGGGCAGTGGGACAAGATGTGTGCAATACCAGCTAC CACGTGAGAGCTCAGCAGTGCAGTAGGAGACCATGAGCAGACAAAACAGC GCGTATCCACGCGCTCGGGGCGTCCTCCCGACGGACTACACTGGGGGTGG AGATGGGGGAAATAGCACAACATGGACGTCGCTTCCCCTCGAAACACCAA CCTTTGGCGCTGGAGCTCTTCCTCGAAACGGCAGCGGTGTCGCGGCGGCG AACGGGGGACCTCCCGTTGGCTACGCCGATTACTCACCGCTGGACTATAG CTCTAGCTGGCAGCAGATGCCGAAGGGATTAGTGGATGCTGGAGTTGATT CGACAGGCTCGCTTGGTGGGGCCGGTGGAGCAATCGGGAGCAAACAGAGC AAAACGTATAGGCTAGCCGTCAAGCGCACGCTAGTCTCCATCGCGTTGAG TTGCTGCTTCGGCCTCGTCACGATGCTGTTCAGGGGACAACAGTCGGGCC TCGAGTTTTTTGCCGGCTATCTCGTGGAGCAAAGCTTATCGTGAGTGTTT GTAAAAAAGTGCGGCGTAATTATTAACCGTGTCGATCGTGATCACCGGCA GGCAGAGGCAGTAGGGCCGCTGCGCCGCTGCTGCAACGCTCCGAATCCTC CCGATGAGGCTCACATATTGACGATCTACTGGAAAATGTATCGTAGGAGT TGAGGCGAATGTTAAAAACGCTGGAATCAAACGCTCGTGAAGCGTTTAGT GGAGGTTGCCTTTGTGCCACTACGTAACCTGTGTCTAACCCTTCTGTGTG GAAGTTGGGAGTTGAGGCGAATGTTAAAAACGCTGGAATCAAACGCTCGT GAAGCGTTTAGTGGAGGTTGCCCATGTGCCACTACGTAACCTGTGTCTAA CTCTTCTGTGTGGCAAGTTGTGTGACGTATCCTGGTGCAATTAAGGTAGC TTTCCAAAGGCAGGGAGGGCGTTGTTCATCACCACTACCCTTTGAAAGTA TGAATGAGGCGCATACACGAGCATCAGCTCAGCCTGATTCCCGTGCACTT GGATAACACAGACACTGCTGTTTCGATAACATCTTTTTATTTTTGCGTTT GGAACCGAGAAGTAATTCACGTACATATGTGTTTACCTTACTCGGACGAG AGGAGGATCCATCTTTGTATAACTACCAACCCATGGCTCTTTGCTCGAAA CTCTACTGTGTGATCGAACCCCTCGCTTGGTGCGAAGCGTGGACAATCTG TTCGTCTTCTTGATGACTTTCGACTACTTTCAGGTTCCATTGGAGCACCA GGGCCGCGTGTTGACCTGGGGAATCGTAGGCGCAATCCTCATGAGAGGTA TGTATGTATGTATGTACAGGAGCTGCACGGCAGTATCCATCACAAGCTCC GTTACCGTTTCAAGCATCGTTATACCCTCGCTTGCTCCGCATGCATAGCA CGAAACAGCACTTGTGAGCTTGCAAGCAATTTAGATTTCCCGTTGGAAGC ACTTGTGTAGTTTGTTGCACAAGCCCCAACCCCTGCTCGTGGCTGCAACC GGCGTCTGACTCTGGGACGGTTTGGCCCACCCCACAGGCATCATGATAGC CTTCGGCGTAGCGGCAGTGAAGAGGTTTGAGTGGATCACGGTCGTCTTCG CGGCGATCCTTCTGGTGTCATCGTACAAGCTCCTCGTCGAGACCGAGGAC GAAGATCACGACCTCAGCCAAAACACGCTGGTCAGGTGGGCGCCAAATGT GCACGCGGTATGTAAGCCAAATGTGCACGCGGTATGTAAGCTACTACTTT TGTGTGCTCTTGTTCCGCAGTATCCGAAGTTGGCGCCATATCCTAGAGAT TGAGTACATCTAAGAAGCGCATGTGCTCAATGGAGGTTGTGCTATTCCCT CCATTCCTGCTAGTAGTGTCGTCGTGTGCGCACAGTTTTTAGCTGCCTCT TTTGGCTAGACCCTGCAGCTAGACCCTACAGCTACTACTGCATGTCTGCA TGTCATTTTCTGCAGGAAAAGTGTAGGCGCTTTTTGCGGCGGCACCAGCG GCGGGTTCTCCGCCGCTTCCGCTTCCCCATAGTTTCGCGCAGGACTCTTC ATTTTTTCCCGACGTGAATGTATCGCCGACCGTTTGTGTAGGCCGACTTT TGACCGCCGAAGTTGGCAACCTACATACCATGTAGCTGTCCTGTAGAATG TGGAGCTATTGTAGCACCCACAAACTTATTGCTGAGTTTTTCTGGCGGCA AACTTTCAAACCTGGTCTCACACACATACTTATCGCTTCAAACGTTGTTC TCTGCACTTCGCCCCTCCACCGCAGGTGCCATCGCACTCCGTATTGCTCA TTCAATGCCTATGATGTTCGCTTTTGATTCGAGTTTTCATTGTGCGATCG CATTCATTGATTTCCCACGTCGTTTTTCTCCTTGTAACCTGCGTTGCCCG TTTCTGTGTTTTGGCCAGAATGTCGAAGAAACTTGTCGGGGCCGTTGACG AGTACGACGGCGATCGCTTCTTCACACGACTCGGTGGCAAGGGGAAGACT GTTGCCACTCCGCTTCTGCTTTGCCTGGTGTGCATCGAGCTCTCGGACTT CGTATTCGCGGTCGACTCGATCCCGGCGGTGCTTGGAATTTCGCAGGCGA GGAGCGTTGACTGCTGTTTCTTTACGTCAGGCTAGATTGTGTCGTTGAGG GTAACTTTTACGATTCGTGGCTGTTGCGGCCGCGTCACGTCCGAACTGCT GTATACTGTTTGAATACACGCACTACACGCAATGAAGTCTTTTTTGCACA CCCGCGACCCTGGTCTTAGATAGGACGGCTCGGGAGACATTCGCTTACCT CCATTGTCTGACAGCCGTTCGCGTCGTGTGTGTGTGCTTCTTGCTCTTTT GTTGCACCGCCGTGTCCAGGACCCGTTTATCGTTTTTTCGAGCAATCTTT TCGCGATCATGGGGCTGCGCAGCATCTACGTCATAATAGCACAATTGGTC TCTACCTTGCCGTACCTCAAACCCGCGGTCGCGCTCGTGCTGGGGTTTGT GGGGTGCAAGATGCTGCTAGAGTACATGCACATCAAAATCAGCACCGGCT GGAGCCTCCTTGTGGTGCTGTCTCTCATCAGCGGCGGGGTCGCGCTGAGC TTGGTGGCCCGGCGGCGTCAGGCGCCGGTGGTACGACACAAGCGACGAAA TAGTGGGACTTTGCCGTCTGAAAACGGCGGCGGGGGGGGGGAAGGAATCT CGTCCGGATTTGTGTGATGTGTTTTGCTGTGTTGGACGGGATGGACCGTT CGGTGTTTGTGCCTGTGCTGAGTGTTGTATGTGTTTTTAGGCACCCTGAT TGGACACGCACCTATTGTACCCACGTGTGCGAGATCGGATGAGACGACCA ATGCATCCGTCGGAACACATCAGTGTGGTTCCCGTGGGCGTTGCATGTTG GCGATGTTGTGTGGCGGTTATTTTTCGATCGCCTAGCCTTATGTTCGTTT GGAGGAGAGTTGTGAGTACTGCTGGTCATGGAAAAAGAGGCGGTTTAAGC ACGGAGGAGGTTCGGTAGTTTGTATATACATACATAAAGGCACCCTTCAA AACGTGCAAGCTTGTTCATTCCACGTGGGCGTGTTCGAACAAAACGTTCG GAGGGAAACAGTAGCAAGTAGCATGAAGCCCGCCCGACATCACAGACGGC GTGTTTTATTCGCTGAAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5475:5461..9279-

>mRNA_L-elsbetiae_contig5475.13739.1 ID=mRNA_L-elsbetiae_contig5475.13739.1|Name=mRNA_L-elsbetiae_contig5475.13739.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2502bp|location=Sequence derived from alignment at L-elsbetiae_contig5475:5461..9279- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGCAGACAAAACAGCGCGTATCCACGCGCTCGGGGCGTCCTCCCGAC
GGACTACACTGGGGGTGGAGATGGGGGAAATAGCACAACATGGACGTCGC
TTCCCCTCGAAACACCAACCTTTGGCGCTGGAGCTCTTCCTCGAAACGGC
AGCGGTGTCGCGGCGGCGAACGGGGGACCTCCCGTTGGCTACGCCGATTA
CTCACCGCTGGACTATAGCTCTAGCTGGCAGCAGATGCCGAAGGGATTAG
TGGATGCTGGAGTTGATTCGACAGGCTCGCTTGGTGGGGCCGGTGGAGCA
ATCGGGAGCAAACAGAGCAAAACGTATAGGCTAGCCGTCAAGCGCACGCT
AGTCTCCATCGCGTTGAGTTGCTGCTTCGGCCTCGTCACGATGCTGTTCA
GGGGACAACAGTCGGGCCTCGAGTTTTTTGCCGGCTATCTCGTGGAGCAA
AGCTTATCATGAGCAGACAAAACAGCGCGTATCCACGCGCTCGGGGCGTC
CTCCCGACGGACTACACTGGGGGTGGAGATGGGGGAAATAGCACAACATG
GACGTCGCTTCCCCTCGAAACACCAACCTTTGGCGCTGGAGCTCTTCCTC
GAAACGGCAGCGGTGTCGCGGCGGCGAACGGGGGACCTCCCGTTGGCTAC
GCCGATTACTCACCGCTGGACTATAGCTCTAGCTGGCAGCAGATGCCGAA
GGGATTAGTGGATGCTGGAGTTGATTCGACAGGCTCGCTTGGTGGGGCCG
GTGGAGCAATCGGGAGCAAACAGAGCAAAACGTATAGGCTAGCCGTCAAG
CGCACGCTAGTCTCCATCGCGTTGAGTTGCTGCTTCGGCCTCGTCACGAT
GCTGTTCAGGGGACAACAGTCGGGCCTCGAGTTTTTTGCCGGCTATCTCG
TGGAGCAAAGCTTATCCGTGGACAATCTGTTCGTCTTCTTGATGACTTTC
GACTACTTTCAGGTTCCATTGGAGCACCAGGGCCGCGTGTTGACCTGGGG
AATCGTAGGCGCAATCCTCATGAGAGCGTGGACAATCTGTTCGTCTTCTT
GATGACTTTCGACTACTTTCAGGTTCCATTGGAGCACCAGGGCCGCGTGT
TGACCTGGGGAATCGTAGGCGCAATCCTCATGAGAGGCATCATGATAGCC
TTCGGCGTAGCGGCAGTGAAGAGGTTTGAGTGGATCACGGTCGTCTTCGC
GGCGATCCTTCTGGTGTCATCGTACAAGCTCCTCGTCGAGACCGAGGACG
AAGATCACGACCTCAGCCAAAACACGCTGGTCAGGCATCATGATAGCCTT
CGGCGTAGCGGCAGTGAAGAGGTTTGAGTGGATCACGGTCGTCTTCGCGG
CGATCCTTCTGGTGTCATCGTACAAGCTCCTCGTCGAGACCGAGGACGAA
GATCACGACCTCAGCCAAAACACGCTGGTCAGAATGTCGAAGAAACTTGT
CGGGGCCGTTGACGAGTACGACGGCGATCGCTTCTTCACACGACTCGGTG
GCAAGGGGAAGACTGTTGCCACTCCGCTTCTGCTTTGCCTGGTGTGCATC
GAGCTCTCGGACTTCGTATTCGCGGTCGACTCGATCCCGGCGGTGCTTGG
AATTTCGCAGGCGAGGAGCAATGTCGAAGAAACTTGTCGGGGCCGTTGAC
GAGTACGACGGCGATCGCTTCTTCACACGACTCGGTGGCAAGGGGAAGAC
TGTTGCCACTCCGCTTCTGCTTTGCCTGGTGTGCATCGAGCTCTCGGACT
TCGTATTCGCGGTCGACTCGATCCCGGCGGTGCTTGGAATTTCGCAGGCG
AGGAGCGACCCGTTTATCGTTTTTTCGAGCAATCTTTTCGCGATCATGGG
GCTGCGCAGCATCTACGTCATAATAGCACAATTGGTCTCTACCTTGCCGT
ACCTCAAACCCGCGGTCGCGCTCGTGCTGGGGTTTGTGGGGTGCAAGATG
CTGCTAGAGTACATGCACATCAAAATCAGCACCGGCTGGAGCCTCCTTGT
GGTGCTGTCTCTCATCAGCGGCGGGGTCGCGCTGAGCTTGGTGGCCCGGC
GGCGTCAGGCGCCGGTGGTACGACACAAGCGACGAAATAGTGGGACTTTG
CCGTCTGAAAACGGCGGCGGGGGGGGGGAAGGAATCTCGTCCGGATTTGT
GTGAGACCCGTTTATCGTTTTTTCGAGCAATCTTTTCGCGATCATGGGGC
TGCGCAGCATCTACGTCATAATAGCACAATTGGTCTCTACCTTGCCGTAC
CTCAAACCCGCGGTCGCGCTCGTGCTGGGGTTTGTGGGGTGCAAGATGCT
GCTAGAGTACATGCACATCAAAATCAGCACCGGCTGGAGCCTCCTTGTGG
TGCTGTCTCTCATCAGCGGCGGGGTCGCGCTGAGCTTGGTGGCCCGGCGG
CGTCAGGCGCCGGTGGTACGACACAAGCGACGAAATAGTGGGACTTTGCC
GTCTGAAAACGGCGGCGGGGGGGGGGAAGGAATCTCGTCCGGATTTGTGT
GA
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