mRNA_L-elsbetiae_contig5441.13686.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: F2EKT1_HORVV (Predicted protein n=3 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2EKT1_HORVV) HSP 1 Score: 68.2 bits (165), Expect = 6.650e-10 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 351 NLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMC 482 ++C CN GE+LLCD +C FH AC+GLES PEG WYCP C Sbjct: 810 SICSICNEGGEILLCD--NCPSSFHHACVGLESTPEGSWYCPSC 851
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: UPI0015AC8189 (uncharacterized protein LOC118199272 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AC8189) HSP 1 Score: 66.2 bits (160), Expect = 1.860e-9 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 3 Query: 345 EPNLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMCIWEATLAS*RGIHIP*SRHYCRCPPQREDKRCLPNG 590 E N C+ C N G LLLCD C + +H CIG+E+IPEG W CP+ I + + ++C P ++ LP+G Sbjct: 150 EDNHCFICKNPGSLLLCDKKGCIRAYHIRCIGMETIPEGDWMCPLHICSICCSV--------AYYFCSNCPVSYCQKHLPSG 223
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A7J7KVJ7_9MAGN (PHD-type domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7KVJ7_9MAGN) HSP 1 Score: 66.6 bits (161), Expect = 2.120e-9 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 351 NLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMC 482 +LC C +DG+LLLCDG C + FH+ C+GL SIPEGKW+C C Sbjct: 485 DLCGICADDGDLLLCDG--CPRAFHKDCVGLSSIPEGKWFCHCC 526
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A6P5ZSR5_DURZI (LOW QUALITY PROTEIN: uncharacterized protein LOC111303744 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZSR5_DURZI) HSP 1 Score: 65.5 bits (158), Expect = 5.590e-9 Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 3 Query: 342 KEPNLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMC 482 K N+C C+ GEL+LCD C FH++C+GLES+P+G W+CP C Sbjct: 843 KNDNICSVCHYGGELILCD--QCPSSFHKSCLGLESVPDGDWFCPSC 887
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A5B7CIN2_PORTR (Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific n=7 Tax=Portunidae TaxID=6757 RepID=A0A5B7CIN2_PORTR) HSP 1 Score: 65.5 bits (158), Expect = 5.800e-9 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 324 KRTTVKKEPNLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCP 476 +R K + C++C G+L+LCDG +C KG+H C+GL+ +P GKW CP Sbjct: 1715 RRRETKVSEDECFRCGGPGDLILCDGANCPKGYHLECLGLDKLPRGKWICP 1765
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A835HIM4_9MAGN (PHD-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HIM4_9MAGN) HSP 1 Score: 64.7 bits (156), Expect = 9.540e-9 Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 351 NLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMCI 485 +LC C + G+L+ CD C + FHQ C+GL SIP+GKWYCP C+ Sbjct: 400 DLCSYCADFGDLMCCD--MCPRAFHQECVGLSSIPQGKWYCPYCL 442
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A8J5D3B5_CHIOP (Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5D3B5_CHIOP) HSP 1 Score: 64.3 bits (155), Expect = 1.060e-8 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 3 Query: 336 VKKEPNLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCP 476 VK + C++C G L+LCDG C KG+H C+GL+ +P GKW CP Sbjct: 172 VKLSEDECFRCGGSGNLILCDGVDCPKGYHLECLGLKKLPRGKWICP 218
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: D8M0B6_BLAHO (PHD-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M0B6_BLAHO) HSP 1 Score: 59.3 bits (142), Expect = 1.510e-8 Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 3 Query: 378 GELLLCDGDSCW-KGFHQACIGLESIPEGKWYCPMC 482 GE++ CD D+C K FH C+GL+SIPEG WYCP+C Sbjct: 32 GEMIGCDNDNCTIKWFHLRCVGLDSIPEGTWYCPIC 67
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A5P1FI24_ASPOF (PHD-type domain-containing protein n=9 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FI24_ASPOF) HSP 1 Score: 63.9 bits (154), Expect = 1.880e-8 Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 3 Query: 354 LCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMC 482 +C C++ G L+LCD C FH +C+GLES+PEGKW+CP C Sbjct: 844 ICTVCHDGGSLVLCD--HCPSSFHLSCVGLESVPEGKWFCPSC 884
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Match: A0A834Z2R9_9MAGN (PHD-type domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z2R9_9MAGN) HSP 1 Score: 63.5 bits (153), Expect = 2.440e-8 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 351 NLCWQCNNDGELLLCDGDSCWKGFHQACIGLESIPEGKWYCPMC 482 ++C C + GE++LCDG C + FH AC+ L+ +PEG WYCP C Sbjct: 545 DMCTVCGDGGEMILCDG--CPRAFHTACLELQDVPEGDWYCPYC 586 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5441.13686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5441.13686.1 >prot_L-elsbetiae_contig5441.13686.1 ID=prot_L-elsbetiae_contig5441.13686.1|Name=mRNA_L-elsbetiae_contig5441.13686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp MGKAESDLFSALVASGACLQVIKVDLPHRGWKELSFRCDLYWQQQDEEQSback to top mRNA from alignment at L-elsbetiae_contig5441:4835..7377- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5441.13686.1 ID=mRNA_L-elsbetiae_contig5441.13686.1|Name=mRNA_L-elsbetiae_contig5441.13686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2543bp|location=Sequence derived from alignment at L-elsbetiae_contig5441:4835..7377- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5441:4835..7377- >mRNA_L-elsbetiae_contig5441.13686.1 ID=mRNA_L-elsbetiae_contig5441.13686.1|Name=mRNA_L-elsbetiae_contig5441.13686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig5441:4835..7377- (Laminarionema elsbetiae ELsaHSoW15)back to top |