mRNA_L-elsbetiae_contig5438.13679.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.440e-11 Identity = 44/112 (39.29%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 187 DYTLIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLGKCFCA------TTLADSDHYAAGDCNVHCAPNTEEICGGRDAISVYEIAGSSSSPTTSGQT 504 DY + C +D ++ RV+ GP + MSAEIC C +D +FGTQ G+ + T + A C CA N EEICGG DA+SVYEI SP T+ T Sbjct: 470 DYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEEDLSGQPRPPPTAPTXETSTA--CVYPCAGNPEEICGGFDALSVYEIVADIPSPPTTAPT 579
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: A0A2J6R6G7_9HELO (WSC-domain-containing protein n=1 Tax=Hyaloscypha variabilis F TaxID=1149755 RepID=A0A2J6R6G7_9HELO) HSP 1 Score: 70.5 bits (171), Expect = 1.430e-10 Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 190 YTLIGCSSD-DKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLG-KCFCATTLADSDHYAAGDCNVHCAPNTEEICGGRDAISVYEIAGSSSSPTTS 495 Y +GC +D DR LS + + M+ E C+A+C R YFG + +C+C +L S G C++ CA N EICGG +S+Y+++G SPT S Sbjct: 1210 YAYVGCQTDAGAGDRTLSSTSFTDTLMTVEACSAFC--GTRGYTYFGVEYATECYCGNSLGTSTVATDGRCDMTCAGNATEICGGPGGLSLYKLSGPVPSPTAS 1311
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.800e-10 Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 1 Query: 193 TLIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLGK-CFCATTLADSDHYAAGDCNVHCAPNTEEICGGRDAISVYEI 465 T +GC DDK DR L+F + MS E C +C F + G+ CFC T D + Y C+ CA + + +CGG DA+SVY I Sbjct: 746 TYMGCYGDDKGDRALTFAYTASDTMSFEECECFCSAAGAS--IFALEYGRQCFCGTDETDFEAYGPAVCDTPCAGSPDTVCGGYDAMSVYNI 835
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 8.670e-10 Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 193 TLIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLG-KCFCATTLADS-DHYAAGDCNVHCAPNTEEICGGRDAISVY 459 +L+GC D+ + R++ F TS M+ E+C A C G N YFG Q G +CFC D H + C+ C ++E++CGG A+SVY Sbjct: 190 SLVGCYQDESDARIMEFALTDTSSMTMEMCEAECSG----NTYFGMQYGTECFCGGESTDLLQHGESTACDYECPGDSEQVCGGFYAMSVY 276
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 9.170e-10 Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 1 Query: 64 DYTVDRETYLTAMKVSTAWWVGLVMSITGALVDANTKKVKYD------YT--------LIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLGK-CFCATTLADS-DHYAAGDCNVHCAPNTEEICGGRDAISVY 459 DY++ E LT+ + W L+ A DA+ +D YT +GC D+ + R++ +S M+ EIC A C G N YFG Q G+ CFC + D +H + CN C +++++CGG A+SVY Sbjct: 321 DYSMTTEVLLTSAVRAYMPWKHLLRHPVRARGDADQTCGGFDAANVYQYTDGNAPTSSFVGCYQDESDARIMELALTDSSSMTMEICEAECTG----NTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVY 464
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: A0A6A6SVQ0_9PLEO (WSC-domain-containing protein n=1 Tax=Lophiostoma macrostomum CBS 122681 TaxID=1314788 RepID=A0A6A6SVQ0_9PLEO) HSP 1 Score: 67.8 bits (164), Expect = 1.190e-9 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 190 YTLIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLG-KCFCATTLADSDHYAA-GDCNVHCAPNTEEICGGRDAISVYEI 465 YT +GC ++ N R L + S M+ E+C+A+C G YFG + +C+C +L + A G CN+ CA N EICGG + ++VY++ Sbjct: 1339 YTSLGCYTELNNARALKAQSFANSSMTLELCSAFCSGYT----YFGAEYASECYCDNSLPSASLPATDGRCNMPCANNASEICGGPNGLNVYQL 1428
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 2.780e-9 Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 1 Query: 199 IGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLGK-CFCATTLADS-DHYAAGDCNVHCAPNTEEICGGRDAISVY 459 +GC D+ R++ +S MS E+C A C G N YFG Q G+ CFC + D +H + CN C +++++CGG A+SVY Sbjct: 304 VGCYQDESGSRIMELALTDSSSMSMEMCEAKCRG----NTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVY 388
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: A0A4S4LT11_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LT11_9AGAM) HSP 1 Score: 65.9 bits (159), Expect = 5.320e-9 Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 199 IGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCL--GEDRENKYFGTQLGKCFCATTLADSD-HYAAGDCNVHCAPNTEEICGGRDAISVYEIAGSSSSPTT 492 +GC +D +RVL G T +S E C + C G F TQ CFC TL ++ AGDCN+ CA N+ E CGG + ++VY G++ P T Sbjct: 157 LGCYNDSTANRVLGVGMAVTGLVSVETCTSACFNAGYPLSGMEFATQ---CFCGLTLTNNAVSEPAGDCNMPCAGNSSEFCGGPNRLNVYNYTGTNLPPVT 254
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: A0A177CUV9_9PLEO (WSC-domain-containing protein n=1 Tax=Paraphaeosphaeria sporulosa TaxID=1460663 RepID=A0A177CUV9_9PLEO) HSP 1 Score: 64.3 bits (155), Expect = 1.440e-8 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 157 VDANTKKVKYDYTLIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQL-GKCFCATTLADSDHYAA----GDCNVHCAPNTEEICGGRDAISVYE 462 VD K KY IGC D+ +R LS M+ + C +C + + Y G + G+C+C + +AD A+ G+C + C+ N E++CGG DAIS+YE Sbjct: 358 VDVTNKGFKY----IGCGKDNALERTLSEELLTGDDMTVDKCIDFC--KSKSKSYAGLEYSGQCYCGSAVADDRAPASARGVGNCLMKCSGNQEQVCGGNDAISLYE 458
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Match: V5ILY1_NEUCR (Uncharacterized protein n=6 Tax=Neurospora TaxID=5140 RepID=V5ILY1_NEUCR) HSP 1 Score: 64.3 bits (155), Expect = 1.840e-8 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 190 YTLIGCSSDDKNDRVLSFGPYRTSPMSAEICNAYCLGEDRENKYFGTQLG-KCFCATTLAD-SDHYAAGDCNVHCAPNTEEICGGRDAISVYEIA--GSSSSPTTSG 498 Y+ +GC SD R L +++ MS + C YC G KYFGT+ +CFC L + + G CN+ C N ++ICGG + +S+Y++ G+SSS T SG Sbjct: 1223 YSSLGCYSDAVASRSLQGKNTQSNVMSLDDCATYCAGY----KYFGTEYSAECFCGNDLLNGAAPVTDGRCNMLCNGNQQQICGGSNGLSMYQLNPNGTSSSVTASG 1325 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5438.13679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5438.13679.1 >prot_L-elsbetiae_contig5438.13679.1 ID=prot_L-elsbetiae_contig5438.13679.1|Name=mRNA_L-elsbetiae_contig5438.13679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=173bp MKVSTAWWVGLVMSITGALVDANTKKVKYDYTLIGCSSDDKNDRVLSFGPback to top mRNA from alignment at L-elsbetiae_contig5438:6626..11122+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5438.13679.1 ID=mRNA_L-elsbetiae_contig5438.13679.1|Name=mRNA_L-elsbetiae_contig5438.13679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4497bp|location=Sequence derived from alignment at L-elsbetiae_contig5438:6626..11122+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5438:6626..11122+ >mRNA_L-elsbetiae_contig5438.13679.1 ID=mRNA_L-elsbetiae_contig5438.13679.1|Name=mRNA_L-elsbetiae_contig5438.13679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1038bp|location=Sequence derived from alignment at L-elsbetiae_contig5438:6626..11122+ (Laminarionema elsbetiae ELsaHSoW15)back to top |