mRNA_L-elsbetiae_contig543.13666.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: D8LDE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDE9_ECTSI) HSP 1 Score: 218 bits (555), Expect = 8.440e-71 Identity = 106/142 (74.65%), Postives = 123/142 (86.62%), Query Frame = 1 Query: 1 MSPPLWALSLPIGSMLILVPRLTSLALQIMSGAPLKNSNPREHAEGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMWEAAL 426 MSPPLWALSLP+G++ + VPR+ SL LQIMSGAPL+NS+PREHAE K+VAAKDTHGYVRR+YAAHQNSWE+MILWS AVL AK+TGV+ D MN A VWLAAR VY PAYILI+SN+KAFFRTFVF IG ++ LMW+AAL Sbjct: 1 MSPPLWALSLPVGTVFVFVPRIISLTLQIMSGAPLRNSSPREHAESKDVAAKDTHGYVRRAYAAHQNSWEAMILWSAAVLFAKSTGVDVDVMNNTAAVWLAARFVYTPAYILIRSNTKAFFRTFVFTIGTACSVRLMWQAAL 142
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: D8LDF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF0_ECTSI) HSP 1 Score: 201 bits (511), Expect = 4.250e-64 Identity = 97/142 (68.31%), Postives = 115/142 (80.99%), Query Frame = 1 Query: 1 MSPPLWALSLPIGSMLILVPRLTSLALQIMSGAPLKNSNPREHAEGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMWEAAL 426 MSPPLWALSLP G++ + VPR+ S ALQ+ SG PL N NPRE E K+VAAKDTHGYVRR+YAAHQNSWE+MILWS AVL AK+TGV+ MN A VWLAAR VY PAY++I+SN+KAFFRTF+F IG ++ LMW+AAL Sbjct: 1 MSPPLWALSLPTGTVFVFVPRVISWALQVKSGVPLSNVNPREQVESKDVAAKDTHGYVRRAYAAHQNSWEAMILWSVAVLFAKSTGVDAGVMNKNAAVWLAARFVYTPAYVMIRSNTKAFFRTFIFMIGTSCSMRLMWQAAL 142
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A6N2D3T7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D3T7_9DELT) HSP 1 Score: 66.6 bits (161), Expect = 2.830e-11 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 13 LWALSLPIGSMLILVPRLTSLALQIMSGAPLKNSNPREHAEGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLM 411 LW++ L I +L+ VPR +A I L N NPR E G R+ AAHQN++E++IL++ A L A TG + N AGV+LA+R VYI YI + R+ V+ +G STL+L+ Sbjct: 7 LWSILLTI--VLVFVPRGVVVATLIRGKGGLDNRNPRAQLARVE-------GRAARANAAHQNTFEALILFAPAALAAFVTGADPMVANALAGVFLASRAVYIALYIGDVPTA----RSLVWGVGFLSTLALL 126
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: UPI000837DE83 (MAPEG family protein n=1 Tax=Vibrio tritonius TaxID=1435069 RepID=UPI000837DE83) HSP 1 Score: 60.8 bits (146), Expect = 4.290e-9 Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 166 GYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMWE 417 G+ R+ AAHQN++ES+I+++TA+LLA TTG + + A + + +RVVY Y++ KS+ R+ V+ I +L+++WE Sbjct: 46 GFGARALAAHQNTFESLIIFATAILLAVTTGTTGEIVQLLAIIHIGSRVVYNILYLMDKSS----LRSLVWVISFGCSLAIIWE 125
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A1G0Y002_9GAMM (Uncharacterized protein n=1 Tax=Legionellales bacterium RIFCSPHIGHO2_12_FULL_42_9 TaxID=1798569 RepID=A0A1G0Y002_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 6.020e-9 Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 166 GYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMW 414 G+ R+ AAHQNS+ES+I++S A+L A T T + A V+L +RV+Y Y+L + A R+ ++AIGL S+LS++W Sbjct: 47 GFGARALAAHQNSFESLIIFSAAILTALATQHTTSTIQILAIVYLISRVIYHLFYLL----NWATLRSTIWAIGLVSSLSIIW 125
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A4R6YAJ4_9BURK (Putative MAPEG superfamily protein n=1 Tax=Hydromonas duriensis TaxID=1527608 RepID=A0A4R6YAJ4_9BURK) HSP 1 Score: 57.4 bits (137), Expect = 8.700e-8 Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 43 MLILVPRLTSLALQIMSGAP-LKNSNPREHAEGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMWEAAL 426 ML+L L +A+ I P N NPR + E ++ H +R AA NSWE++I+++ AVLLA V +N AGV++ AR+VY+ Y + A R+ V+ +G+ L L +AL Sbjct: 7 MLLLATILPIVAVAIAKSQPGFDNHNPRAYLE--QLPEGSMH---KRMVAAQANSWEALIMFAPAVLLATMLHVQASTLNLLAGVFIVARIVYLWCY----AKDLATQRSLVWTVGMVCILGLYIASAL 126
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A3E0TTY3_9GAMM (MAPEG family protein n=2 Tax=Thalassotalea euphylliae TaxID=1655234 RepID=A0A3E0TTY3_9GAMM) HSP 1 Score: 56.2 bits (134), Expect = 2.550e-7 Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 109 NSNPREHAEGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMW 414 N++PRE AK T G+ R+ AAHQN++ES+I+++TAVLLA +T + + A + ARVVY Y+L + R+ V+ +G+ + ++MW Sbjct: 34 NNHPREQQ------AKLT-GFGARALAAHQNAFESLIVFATAVLLAISTNTTGETIQLLAITHIVARVVYHLLYLL----NIGLLRSIVWGVGIVCSFAIMW 124
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A0W0SPA3_9GAMM (Transmembrane protein n=1 Tax=Legionella brunensis TaxID=29422 RepID=A0A0W0SPA3_9GAMM) HSP 1 Score: 55.8 bits (133), Expect = 3.500e-7 Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 166 GYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMW 414 G+ R+ AAHQNS+ES+I++S A+L A T T + A +L +R VY Y+L + A RT V+A+GL ++LS++W Sbjct: 47 GFGARAVAAHQNSFESLIIFSAAILTALVTHNITHTIQGLAIFYLLSRCVYHLLYLL----NWATLRTTVWALGLIASLSIIW 125
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A7C7ZMC6_9DELT (MAPEG family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7ZMC6_9DELT) HSP 1 Score: 55.5 bits (132), Expect = 5.010e-7 Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 1 MSPPLWALSLPIGSMLILVPRLTSLALQIMSGAPLKNSNPREHA-EGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIGLFSTLSLMWEAA 423 M+ PLW L I S + V L++ L ++PR A E ++VAA R+YAA QN+WE++ L++ AV+ A G + T A V++ ARV++ YI + + RT VF + L S +SL + AA Sbjct: 1 MTTPLWCLL--IASFIPFVLAGIGGYLRVQQLGELDANHPRVQAYELRDVAA--------RAYAAQQNAWEALGLFTAAVVTAHLAGADAGSSATAASVFIVARVLHAGTYIADLAPA----RTVVFIVALGSCISLFYLAA 128
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Match: A0A7U4Y8J6_9BURK (Uncharacterized protein n=4 Tax=pseudomallei group TaxID=111527 RepID=A0A7U4Y8J6_9BURK) HSP 1 Score: 55.1 bits (131), Expect = 6.090e-7 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 91 SGAPLKNSNPREHAEGKEVAAKDTHGYVRRSYAAHQNSWESMILWSTAVLLAKTTGVNTDKMNTRAGVWLAARVVYIPAYILIKSNSKAFFRTFVFAIG 387 SGA N PR++ E G+ R++AAHQNSWE++ L++ A+++A G N +++ A V++A+RVVY Y+L + A R+ V+ +G Sbjct: 24 SGACYDNRAPRQYLAQLE-------GWRARAFAAHQNSWEALALFTGALVVAWHNGANVQRVDQLAIVFVASRVVYGVFYLL----NWAALRSLVWTVG 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig543.13666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig543.13666.1 >prot_L-elsbetiae_contig543.13666.1 ID=prot_L-elsbetiae_contig543.13666.1|Name=mRNA_L-elsbetiae_contig543.13666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp MSPPLWALSLPIGSMLILVPRLTSLALQIMSGAPLKNSNPREHAEGKEVAback to top mRNA from alignment at L-elsbetiae_contig543:12372..14332+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig543.13666.1 ID=mRNA_L-elsbetiae_contig543.13666.1|Name=mRNA_L-elsbetiae_contig543.13666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1961bp|location=Sequence derived from alignment at L-elsbetiae_contig543:12372..14332+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig543:12372..14332+ >mRNA_L-elsbetiae_contig543.13666.1 ID=mRNA_L-elsbetiae_contig543.13666.1|Name=mRNA_L-elsbetiae_contig543.13666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig543:12372..14332+ (Laminarionema elsbetiae ELsaHSoW15)back to top |