Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 1207 |
Cds size | 915 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816559.9078407-UTR-L-elsbetiae_contig5375:338..479 | 1622816559.9078407-UTR-L-elsbetiae_contig5375:338..479 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5375 339..479 + |
1691683647.5391173-UTR-L-elsbetiae_contig5375:338..479 | 1691683647.5391173-UTR-L-elsbetiae_contig5375:338..479 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5375 339..479 + |
1622816559.9460926-UTR-L-elsbetiae_contig5375:4219..4370 | 1622816559.9460926-UTR-L-elsbetiae_contig5375:4219..4370 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5375 4220..4370 + |
1691683647.5719037-UTR-L-elsbetiae_contig5375:4219..4370 | 1691683647.5719037-UTR-L-elsbetiae_contig5375:4219..4370 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5375 4220..4370 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816559.9200854-CDS-L-elsbetiae_contig5375:479..1390 | 1622816559.9200854-CDS-L-elsbetiae_contig5375:479..1390 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5375 480..1390 + |
1691683647.5522814-CDS-L-elsbetiae_contig5375:479..1390 | 1691683647.5522814-CDS-L-elsbetiae_contig5375:479..1390 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5375 480..1390 + |
1622816559.934996-CDS-L-elsbetiae_contig5375:4215..4219 | 1622816559.934996-CDS-L-elsbetiae_contig5375:4215..4219 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5375 4216..4219 + |
1691683647.5622606-CDS-L-elsbetiae_contig5375:4215..4219 | 1691683647.5622606-CDS-L-elsbetiae_contig5375:4215..4219 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5375 4216..4219 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5375.13574.1 >prot_L-elsbetiae_contig5375.13574.1 ID=prot_L-elsbetiae_contig5375.13574.1|Name=mRNA_L-elsbetiae_contig5375.13574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp
MPSKCHHVGCPKQPGYGAAGTKTAEFFSGHKKEGMVDVKNRKCAHHGCTK RPNYGAAGSQKMEFCSGHKKEGMVNVKDSKCNHHSCTKRPNYGIAGTKVA EFCSGHKKDGMVDVKNRKCAHHGCTKCPAFGIVGTKTAEFCSRHKKDGMV DVKNRKCAHHGCTKQPNYGVIGTKRKLCAQHAEGDMAHLTAPNNRFSGEA RGGSGSGSGSERDRVAVGDIGTAHGAGAGQERKGRASSSEQTGVFSSKRA RQAPVDPPATPHPSEAPIDEGPSPEEDASVSGTGDAAVKMEAGMFCIGRR GSWR* back to topmRNA from alignment at L-elsbetiae_contig5375:339..4370+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5375.13574.1 ID=mRNA_L-elsbetiae_contig5375.13574.1|Name=mRNA_L-elsbetiae_contig5375.13574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4032bp|location=Sequence derived from alignment at L-elsbetiae_contig5375:339..4370+ (Laminarionema elsbetiae ELsaHSoW15) GCGCTAAGGTCTGTGGGACACAGCCAAAGAGTTGAAGGGGGGTTAGGCAG
AAGACCGACCGCTGATTGCTGCCACGTTGCCCTCTTGCAGGGCTACGTAG
CACGTAGACTCCATTTCTCGCTAGGTGTTTTAGCGAAGAGGATGCCGAGC
AAGTGTCACCATGTTGGCTGTCCCAAGCAGCCGGGCTATGGTGCTGCCGG
CACCAAAACAGCGGAGTTCTTCTCTGGACACAAGAAGGAGGGGATGGTGG
ATGTCAAGAACAGGAAATGCGCCCACCACGGTTGCACCAAGCGGCCGAAC
TATGGTGCTGCCGGCAGCCAGAAGATGGAGTTCTGCTCTGGACACAAGAA
GGAGGGGATGGTGAACGTCAAGGACAGCAAGTGCAACCACCACAGTTGCA
CCAAGCGGCCGAACTATGGTATTGCCGGTACCAAAGTAGCGGAGTTCTGC
TCTGGACACAAGAAGGACGGGATGGTGGATGTCAAGAACAGGAAGTGCGC
CCATCATGGTTGCACCAAGTGCCCGGCCTTTGGTATTGTCGGCACGAAAA
CAGCGGAGTTCTGCTCTAGACACAAGAAGGACGGGATGGTGGATGTCAAG
AACAGGAAGTGCGCCCACCACGGTTGCACCAAGCAGCCGAACTATGGTGT
TATCGGGACCAAGAGAAAACTATGTGCCCAACACGCCGAAGGGGACATGG
CCCATCTCACTGCACCAAATAACAGGTTCAGCGGTGAAGCACGGGGCGGC
AGCGGCAGCGGCAGCGGCAGCGAGCGTGACCGTGTTGCAGTAGGTGACAT
TGGCACCGCCCACGGTGCTGGTGCCGGTCAAGAGCGGAAGGGTCGTGCTT
CCTCGTCCGAGCAGACGGGGGTCTTCTCGAGCAAGAGAGCCCGCCAGGCT
CCCGTTGACCCGCCTGCAACTCCACACCCATCGGAAGCACCTATCGATGA
GGGTCCATCTCCGGAGGAAGATGCTTCGGTATCGGGGACAGGCGATGCCG
CGGTGAAGATGGAGGCGGGAATGTTTTGTATAGGACGGCGAGGGAGCTGG
AGGTGAGTTGAAGACCATCACTAGACGATATACTGCTTTCTTGGTGTATT
TACTGCTGTTACCTTGTTTGGGCTTGTTGCCGTGAATTAGTCAAGGCTGG
ACACGATCACGTAGCTGAGGGGAAAAGGCTGATCCCAGAAAAGGCGAAGA
GGCATGTTGTGTTGTGTGGTCCGCACGCGGCAAAAACTGATGTGGTTTCC
AGGTGGTGGATGAAACTCCAAAACAATAGCGGCGCAACTGTTTTTTTGGT
CTATTTTCGCAATAATACTAAGCGCCATCGCAATTGAAATGGTGGCACCA
TCTCCTCGGCCAGAAGGTAAATATATTTATCGAAAGCTAAGGACAACAGC
TACCTTCGCGTAGCCTTCGTTTCCCTCTAGTGGTGCTGTAGGGCCTTTGC
TGTCCTGCGCTCTTCGTACAAAGTCGAGAGCTACTGCTGTAGAGCTCTTG
ACATGGCGAACGACACTACCATTTCAAAACGGGGGTGCCACCGCTGCTGA
GGGCGTCAGAGATTGCTTTGAGATACTAATCGAGACACCTGTGTCTCCTC
GTAGCCCCTAATTGAGCGTGAGAGTCGTGGTGTGCGTCGCCACATAGGCT
AAAGGTTGGAGTTAGGCCGCATTTGTACGGCGGTCTCGCACGTGTTCCTG
GGGGCTCCGTGACGCTATTTCCAGCAAATTTGTAAGTTTAGGCCCATTAT
GCTTTTTTTCCGCTTATTTTATGCTCCTTTTTTTTTTTAAGGGGCATATG
CTCTTTTTTTCAACCCCAAGTATGCTCCAAGAATAGGCAAATTATGCTCA
ATTGATCCTCAAAAATCCTAATTATTCTGAATAGTGGCAAATATGCCCCC
TTTATGCTCCAAAAAACAGAGCATAATCGTATCATGTTCAAAGCTTGCCA
GCATAATGGGTCTAAGCCTACAAATTTGGGTCGCAGCTGTACGTCACGAC
GACGCCAAAAAAATCGTTTTTCCTGTTGGATGGCCGATCAATCCAATAAA
CCTCCGCCTGCACACCATAGAGCTCCATTCCAACCTTAGTAGGGCGACTG
CTAACGCTGTGGTGGTGATCATAATTTTTAGCAACGCTTTATTCGGTCTA
TAGTACCATGTCTTCAACGTGGCCAAGCGTCAGACGACTTAGACAACTCT
ACCATGGCAGCCAACAGGCGTAAAGTTGGCCTTGCGAAAGGCGCAAAAAC
ACCTGCAACAGGCATGATTCCAGTGGCGATGGCACAGCATTTATCCGGTT
CAACGTCGATTGATGGCCTAAAAGCTCCTTGCGGACATAGTTAATGACTG
TGTTGAGCTTCTCTGGGGATTTGGTGGGAAGGCGTGTTCTGTGTGATCAG
CCTTGGCGGTGACAAAGTAGGTGACCCACACCGCGTCCGCAACAAAAAAC
CAGAGGGGTTCCGGAGAATCATGATGGTACCTCGCTCCCGATTGGCGACC
TTTCTTTTCATTTTCCCACAGCAGCAACGCGTGTGTCCCAAACGAGCCAA
AAAGGCTATTTTGGCCCAGCGCCACTCAAGGCTCAAGGATCCGTTTCAAG
CCTGCCCCCCGGCTATGTTATTGTTTTGGGACGCCCTTCGACATATATAT
CTGTTTAACCCCTCTGGCACTAGGCTCGTCACAGGCCGCAAGGCGAGCAG
CCCAGAAAACGCGGCGGGAGTACTGAAAAAAACTGGGCCGCACAGCAGAT
ACGTGGGTTATCTGATATCTGCACTGAAAAGAGACTTCCGTTTGCAGAAG
TCAATCCCGCAGCAGAACACTTATCGCGGCCGTGTTGCCACCCGGCAACA
CACTGGGGAGGTATGTTGGCACACTAGAAAGGTTCATCGGCCGTCAAAAC
ATCACTGTTGGCTCGAAACATTTTTCTCTTCGCAGGGCTATCCCGGGTTC
TGAACTCCTCTGAAAGCAGCTTAAATTCAGTATGTTACATACCAGATAAT
CATCAAATATAATAACTACTCCGGAGTATCCGTGTCGAAGTGCTCTAGGG
CAATAGGCTACTTCTATACTTCTCGGGGGGCCGCCGCATAGAGTCCCGCC
TCTGGCGCTCGGTTGCTTTGTGATACCCAACGGCAACAGCAAGCAGATCG
ATCTACACCGGTTGCTGGTGTATGTAGACTGAGATCGAAGAGGTGTCTGG
CGATGTAGTGGTGTAGATATATACTTGTGCTACTGGTGGTGTGGGTGTGT
ATGTGTGGTTTGCACGCTGCGTCGTGGGATGAGAGCGAGAGCAAAACCGA
TTTTGTAAATAAACCCCCAAAATCCCATATGAATGCAACATCCCAGCAGC
AGCGGCGGCGGCGGCGGCAGCTGTAGCGTCTGCCGGAGACGAAACATAAC
GTTACAACCCTGCGGCTGCTATGCCACCCCATCTGGGTGACCATTTCGGT
TGTTCATGTTATCGTCCCGATGTACCGACTAGCCCAGGTCCGCACAAAAC
CGGGCGTCTCAATGATCGCTTTTTGTAATCGCAAAACCCCCTTGAAGCCC
CAGAAGGGTTAAGTAGGGGAGCGGTGGTGGGTTCAGATGGTGTGAGTTAT
TGGCATCGTTGTGCAAAACATGTAGTCGAGCATCTACCACAAAGCTCGGC
ACCCAATGATGCGTCATCAACATTGCTTCGTGGACCCCAACGGTCGAATC
ATCAAGTAGAAGGAGCAGTGGCAAGTGCACGGTAGTCTGTGAAGAAACTG
AACATGATGGTCTCAAGCATAGGTCAAATAACATTTGTCCCCGCTAAGAG
CCTTGAAATATGGGCCACTGCCGTTTCCCTCATGTTGCTGAACACCTCTT
TTTTTAATATTCAAAACACTGCGCCAGGTGAAGTTTGACCCTGGTGTCAC
AATATATATGCGAGCGACCCAGCCAAGGTGTGAGTGTCGTGACAAGCCAT
TTCGTAGTGGGAGTTACGGGCATTGTTGCCGGCATCAATCCGCAGCATCG
CATGAACACGAGTGCTGACGGTGATGGCTGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5375:339..4370+ >mRNA_L-elsbetiae_contig5375.13574.1 ID=mRNA_L-elsbetiae_contig5375.13574.1|Name=mRNA_L-elsbetiae_contig5375.13574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig5375:339..4370+ (Laminarionema elsbetiae ELsaHSoW15) ATGCCGAGCAAGTGTCACCATGTTGGCTGTCCCAAGCAGCCGGGCTATGG TGCTGCCGGCACCAAAACAGCGGAGTTCTTCTCTGGACACAAGAAGGAGG GGATGGTGGATGTCAAGAACAGGAAATGCGCCCACCACGGTTGCACCAAG CGGCCGAACTATGGTGCTGCCGGCAGCCAGAAGATGGAGTTCTGCTCTGG ACACAAGAAGGAGGGGATGGTGAACGTCAAGGACAGCAAGTGCAACCACC ACAGTTGCACCAAGCGGCCGAACTATGGTATTGCCGGTACCAAAGTAGCG GAGTTCTGCTCTGGACACAAGAAGGACGGGATGGTGGATGTCAAGAACAG GAAGTGCGCCCATCATGGTTGCACCAAGTGCCCGGCCTTTGGTATTGTCG GCACGAAAACAGCGGAGTTCTGCTCTAGACACAAGAAGGACGGGATGGTG GATGTCAAGAACAGGAAGTGCGCCCACCACGGTTGCACCAAGCAGCCGAA CTATGGTGTTATCGGGACCAAGAGAAAACTATGTGCCCAACACGCCGAAG GGGACATGGCCCATCTCACTGCACCAAATAACAGGTTCAGCGGTGAAGCA CGGGGCGGCAGCGGCAGCGGCAGCGGCAGCGAGCGTGACCGTGTTGCAGT AGGTGACATTGGCACCGCCCACGGTGCTGGTGCCGGTCAAGAGCGGAAGG GTCGTGCTTCCTCGTCCGAGCAGACGGGGGTCTTCTCGAGCAAGAGAGCC CGCCAGGCTCCCGTTGACCCGCCTGCAACTCCACACCCATCGGAAGCACC TATCGATGAGGGTCCATCTCCGGAGGAAGATGCTTCGGTATCGGGGACAG GCGATGCCGCGGTGAAGATGGAGGCGGGAATGTTTTGTATAGGACGGCGA GGGAGCTGGAGATGCCGAGCAAGTGTCACCATGTTGGCTGTCCCAAGCAG CCGGGCTATGGTGCTGCCGGCACCAAAACAGCGGAGTTCTTCTCTGGACA CAAGAAGGAGGGGATGGTGGATGTCAAGAACAGGAAATGCGCCCACCACG GTTGCACCAAGCGGCCGAACTATGGTGCTGCCGGCAGCCAGAAGATGGAG TTCTGCTCTGGACACAAGAAGGAGGGGATGGTGAACGTCAAGGACAGCAA GTGCAACCACCACAGTTGCACCAAGCGGCCGAACTATGGTATTGCCGGTA CCAAAGTAGCGGAGTTCTGCTCTGGACACAAGAAGGACGGGATGGTGGAT GTCAAGAACAGGAAGTGCGCCCATCATGGTTGCACCAAGTGCCCGGCCTT TGGTATTGTCGGCACGAAAACAGCGGAGTTCTGCTCTAGACACAAGAAGG ACGGGATGGTGGATGTCAAGAACAGGAAGTGCGCCCACCACGGTTGCACC AAGCAGCCGAACTATGGTGTTATCGGGACCAAGAGAAAACTATGTGCCCA ACACGCCGAAGGGGACATGGCCCATCTCACTGCACCAAATAACAGGTTCA GCGGTGAAGCACGGGGCGGCAGCGGCAGCGGCAGCGGCAGCGAGCGTGAC CGTGTTGCAGTAGGTGACATTGGCACCGCCCACGGTGCTGGTGCCGGTCA AGAGCGGAAGGGTCGTGCTTCCTCGTCCGAGCAGACGGGGGTCTTCTCGA GCAAGAGAGCCCGCCAGGCTCCCGTTGACCCGCCTGCAACTCCACACCCA TCGGAAGCACCTATCGATGAGGGTCCATCTCCGGAGGAAGATGCTTCGGT ATCGGGGACAGGCGATGCCGCGGTGAAGATGGAGGCGGGAATGTTTTGTA TAGGACGGCGAGGGAGCTGGAGGTGAGTGA back to top
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