mRNA_L-elsbetiae_contig5349.13528.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5349.13528.1
Unique NamemRNA_L-elsbetiae_contig5349.13528.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI)

HSP 1 Score: 1035 bits (2677), Expect = 0.000e+0
Identity = 508/558 (91.04%), Postives = 527/558 (94.44%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVAKLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YPSLPCVRIGSA+KHNYIPMEVCQIAQGQKVAKLDEKQTADMIKITCQRPD+RQGAIHQQFNNIN++MNKSCEQFGIRITN+QIQT+AR+LPPPCIQY+K GRQ TE PQCGSWNLRDKKMFDN KLVSWAVV F QER+LQ QGAE+FVSELVKVM THGM+VSPEA RPPIL+A+ V AN  RVDDATYARNALTAARDAARK+FK DCQLILVPK TQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPN +DQDKSGNV+PGTVVETGICHP+EWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDS            G   +EIDWARCFSSVHQSLTNVMYFV
Sbjct:  410 RYPSLPCVRIGSASKHNYIPMEVCQIAQGQKVAKLDEKQTADMIKITCQRPDVRQGAIHQQFNNINADMNKSCEQFGIRITNKQIQTQARILPPPCIQYNKAGRQQTEQPQCGSWNLRDKKMFDNKKLVSWAVVCFTQERDLQLQGAEHFVSELVKVMGTHGMDVSPEARRPPILMADSVAANNQRVDDATYARNALTAARDAARKKFKVDCQLILVPKPTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNRDDQDKSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSSSESSSVVQGRDGG-AREIDWARCFSSVHQSLTNVMYFV 966          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE)

HSP 1 Score: 974 bits (2519), Expect = 0.000e+0
Identity = 477/558 (85.48%), Postives = 505/558 (90.50%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVAKLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YPSLPCVR+GSAAKHNYIPMEVCQIA GQ+V KLDEKQTADMIKITCQRPD+RQGAIHQQFNNIN +MNKSC+QFGIRITN+QIQT AR+LPPP IQY+K GRQ TE PQCGSWNLRDKKM+DN KL SWAVVSF+ ER+L Q   E FVSELVKVM  HGMEVSPEA RPP+L AE+   N+ RVD+ T+ARNAL AARDAAR  FK DCQLILVPKST DSKDYGEIKLASDT LGIPSQCVLLKHV TAKIQYLANLCLKINAKLGGRNAVP+DKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLA+MVKNLLISFYRVNN+KP+RIIFFRDGVSEGQFREVLR+EVRAIEQACA+LE GYRP+ITFIVVQKRHHTRLFQP   DQDKSGNV+PGTVVETGICHP+EWDFYLMSHGGLQGTSRPAKYHVLWDEN FDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGD+S             K+ KEIDWARCFSSVH  LTNVMYFV
Sbjct:  419 KYPSLPCVRVGSAAKHNYIPMEVCQIATGQRVTKLDEKQTADMIKITCQRPDVRQGAIHQQFNNINDDMNKSCQQFGIRITNKQIQTTARILPPPEIQYNKSGRQPTEKPQCGSWNLRDKKMYDNKKLKSWAVVSFSSERDLPQHVLENFVSELVKVMGIHGMEVSPEARRPPLLNAEQAPGNRQRVDEVTFARNALMAARDAARNAFKSDCQLILVPKSTTDSKDYGEIKLASDTALGIPSQCVLLKHVQTAKIQYLANLCLKINAKLGGRNAVPKDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLAAMVKNLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRFEVRAIEQACASLESGYRPSITFIVVQKRHHTRLFQPRREDQDKSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENKFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDESSSDNSSVVHGKE-KEAKEIDWARCFSSVHSGLTNVMYFV 975          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A024FT57_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FT57_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 1.130e-169
Identity = 271/559 (48.48%), Postives = 358/559 (64.04%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA-KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YP LPC+ +G+  K NY+PMEVC I  GQK   K+ +KQ A+MI+ TC +PD R+  I Q+  +   + +   +  G+ +  + + TKARVLP P + YS+     TE P+ G+WN+++K  F +  L SWAV+S    R       + F ++++K M   GM+V  +   PPI+L ++  A           R+    A   A+  FK   Q+I +     D+  YGE+K +SD   GIPSQC+L KH+  A  QY+AN+ LK+NAKLGG+N+V R+ LP V +APTI+FGADV HPG    S+PSIAAVVASMDR   +H + + VQ HR E I +L  MVK LL+ FY+    KP+RI+F+RDGVSEGQF+ VL +EV AI  ACA+LE GY P +TF+VVQKRH+TRLF  +  D D+SGNV  GTVV+T ICHPLE DFYLMSHGGLQGTSRPA YHVL DE  F +D LQLL Y LC+ + RCTRSVS+ P+ YY+HL+AFRA+FF   GD              GK+  E+D       VH +L NVMY+V
Sbjct:  377 RYPGLPCLHVGAMNKKNYLPMEVCHILAGQKTPRKVTDKQVANMIRFTCTKPDDRKRQIEQKLRDAGFDRDPVLKALGMSVDPKMVTTKARVLPEPEMSYSR----GTERPRDGAWNMKNKSFFQSAHLASWAVISMCDSRRCGPDQIKKFFTQVMKQMKEFGMQVPQQF--PPIILKQQRYAK---------VRDIFKEALSKAQLTFKAPAQIIWLINPVADADVYGELKRSSDIESGIPSQCMLAKHIDKASPQYIANILLKVNAKLGGKNSVVREPLPKVSEAPTIIFGADVTHPGVTETSRPSIAAVVASMDRHCIKHAATIRVQGHRVEQIINLQEMVKELLVLFYKEARVKPSRILFYRDGVSEGQFQMVLNHEVTAIRAACASLEKGYMPAVTFVVVQKRHNTRLFAADQRDADRSGNVKAGTVVDTDICHPLEHDFYLMSHGGLQGTSRPAHYHVLLDEIGFTADELQLLTYRLCYTFARCTRSVSVVPSAYYSHLMAFRARFFTPEGDSDTTSSISGS----GKEA-EVDLR--LMQVHNNLRNVMYYV 913          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A835Z8Z7_9STRA (Argonaute 1 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z7_9STRA)

HSP 1 Score: 509 bits (1312), Expect = 1.670e-168
Identity = 268/566 (47.35%), Postives = 358/566 (63.25%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA----KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDC-QLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAV---PRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            Q+P LPC+RIGSAAK N++PMEVC +A GQ+      KL ++QTAD+IKI C+RP+ R+G +H Q   +  E+N+    FG+R+ N+ I    R+LP P I+Y+      T  P  G WN+  KK  +  +L  W V+     R++Q    + F+   V      GM+VS E  RPPI++           D+     +A+ +A D A K  ++   Q++L     +   DY ++KL  DT LG+ +Q + +KH    K   LAN+ LK+NAK+GGRNAV       L  ++ AP+I+FGADV+H   G+ S+PSIAAVVAS+D    RH +CV VQ  RKE+I+DLA MV+ LL+ F+ +N   P +++F RDGVSEGQFR+VL+ EVRAIE+AC ++   YRP ITFI  QKRHHTR++  N+ DQD+SGN   GTVV+T ICHP E+DF+L SHGGLQGTSRP KY VLWDE  F +D +Q L Y LC++  RCTRSVSIPPAVYYAHL AFRAQ FV   D              G     IDW+  F++VH+ +TNVMYFV
Sbjct:  338 QFPHLPCIRIGSAAKSNFLPMEVCDVAPGQRFTNAGLKLSDRQTADLIKIACRRPEERRGLVHNQLGQLMGELNEHAHGFGMRVHNKAIAMTGRILPVPEIKYAN----GTARPSAGKWNMMGKKFSEAAELACWGVICMCGPRDMQLNDVQQFIVNFVGNAKKIGMKVSME--RPPIVMM---------FDERLSIPDAMQSAFDQAAKAGRRPKPQILLCIMPVKPFPDYPQVKLVGDTQLGVATQLLWVKHARDGKPTVLANVLLKVNAKIGGRNAVLTQSPSSLEPLKGAPSIIFGADVHHASPGS-SRPSIAAVVASLDNQFVRHAACVRVQGPRKEIIEDLAGMVRKLLVLFHSINRVYPQKVVFLRDGVSEGQFRQVLKLEVRAIEEACRSISSDYRPLITFITCQKRHHTRIYAINAQDQDQSGNTQAGTVVDTAICHPTEFDFFLCSHGGLQGTSRPTKYSVLWDEMNFSADQIQKLIYELCYLQARCTRSVSIPPAVYYAHLAAFRAQHFVQDTDFESQSAISGRSGGSGS-AISIDWSERFTNVHEDMTNVMYFV 886          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: F0X160_9STRA (Argonaute2 (AGO2) putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X160_9STRA)

HSP 1 Score: 501 bits (1291), Expect = 5.650e-165
Identity = 262/559 (46.87%), Postives = 350/559 (62.61%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA-KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YP LPC+ +G+  K NY+PMEVC I  GQK   K+ +KQ A+MI+ TC +PD R+  I Q+  +   E +   + FG+ + ++ +  KAR+LP P I YS+     TE P+ G+WN+++K  F +  L SWAV+S    R       + F +++VK M   GM++  +   PPI++ ++  A           R+    A   A+  FK   Q+I +     D+  YGE+K  SD   GIPSQC+L KH+  A  QY+AN+ LK+N KLGG+NAV R+ LP V +APTI+FGADV HPG    S+PSIAAVVASMDR   +H + + VQ HR E I +L  M K LL+ FY+    KP RI+F+RDGVSEGQF+ VL +E+ AI  ACA+LE  Y P ITF+VVQKRH+TRLF  +  D D+SGNV  GTVV+T ICHPLE DF+LMSHGG+QGTSRP  YHVL DE  F +D LQ+L Y LC+ + RCTRSVS+ P+ YY+HL+AFRA+FF   GD                   E++       VH +L NVMY+V
Sbjct:  382 RYPGLPCLHVGAMQKKNYLPMEVCHILAGQKTPRKVTDKQVANMIRFTCTKPDDRKLRIEQKLRDAGFERDPVLKAFGLAVNSKMVSAKARILPEPEISYSR----GTERPRDGAWNMKNKSFFQSAHLASWAVISMCDPRRCGPDQIKKFFTQVVKQMKEFGMQIPQQL--PPIIMKQQRFAK---------VRDLFKEALTNAQTTFKAPAQIIWLINPVADADVYGELKRTSDIESGIPSQCMLWKHIDKASPQYIANILLKVNTKLGGKNAVVREPLPKVSEAPTIIFGADVTHPGLTERSRPSIAAVVASMDRHCIKHAATLRVQGHRVEQIINLQEMAKELLVLFYKEARVKPTRILFYRDGVSEGQFQMVLNHEISAIRAACASLEKDYMPAITFVVVQKRHNTRLFAADQKDTDRSGNVKAGTVVDTEICHPLEHDFFLMSHGGIQGTSRPTHYHVLLDEIGFTADELQVLTYRLCYTFARCTRSVSMVPSAYYSHLMAFRARFFTPQGDSDIMSSISGSGT-------ELEVDLRLMQVHNNLRNVMYYV 918          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A0N7L6Z1_PLAHL (Argonaute 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6Z1_PLAHL)

HSP 1 Score: 495 bits (1274), Expect = 2.510e-162
Identity = 265/561 (47.24%), Postives = 347/561 (61.85%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA-KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASD--TVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YP LPC+ +G+  K NY+PMEVC +  GQK   K  + Q A+MIK TC  PD R+ AI Q+F     + + + + FG+ +  + ++T  R LPPP I+YS   R++   P+ G+WN+R KK     +L SWAV+S A  R   Q   E F   ++  M   GM    +   PP+L+ +R E +          R    AA  AA + F+   Q+I +     D++ YGE+KL SD  T +GI SQC+L KH+     QY+AN+ +K+N KLGG+N V    LP V ++ TI+FGADV HPG  + ++PSIAAV ASMD    RH S + VQ HR E I++L  MV  L+  FYR    KP RI+F+RDGVSEGQFR VL +EV AI  AC +LEVGY P ITF++VQKRHHTRLF  N  D D+SGNV  GTVVETGICHP+E DFYLMSHGGLQGTSRP  YHVL +E  F +D LQ+L Y LC+ + RCTRSVS+ P+ YY+HLVAFRA+FF+  G D+            G D    +      ++H S+   MYFV
Sbjct:  388 RYPKLPCLHVGALQKKNYLPMEVCHVIAGQKCPRKATDNQVANMIKFTCTPPDQRKRAIEQKFREATFDTDPTLKAFGLNVEPRMVETTGRQLPPPTIEYSGGAREN---PRDGAWNMRGKKFNTPAQLTSWAVISMADARYCNQASIETFFKAVMAQMGQLGMRCPTKL--PPVLMKQRREDS---------VRGLFQAAVKAATQTFRTAPQIIWMINPRMDARAYGELKLMSDSETGMGILSQCMLSKHISKCSPQYIANILMKVNTKLGGKNGVISGPLPRVSESHTIIFGADVTHPGPMDKTRPSIAAVTASMDANFIRHASSIRVQGHRVEQIENLKDMVVELMKQFYRQMRGKPDRIVFYRDGVSEGQFRMVLNHEVTAIRAACQSLEVGYLPPITFVIVQKRHHTRLFPDNPKDADRSGNVKAGTVVETGICHPIENDFYLMSHGGLQGTSRPTHYHVLLNEIGFTADELQILTYKLCYTFARCTRSVSMVPSAYYSHLVAFRARFFLAEGSDTASTVS-------GLDVSSAETDMRMYNLHDSMKGAMYFV 927          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A484EDI4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDI4_BRELC)

HSP 1 Score: 488 bits (1257), Expect = 8.450e-160
Identity = 260/561 (46.35%), Postives = 344/561 (61.32%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA-KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTV--LGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YP LPC+ +G+  K NY+PMEVC I  GQK   K+ + Q A+MIK TC  PD R+ ++ Q+F       + + + FG+ +  + ++T  R LPPP I+YS   R++   P+ G+WN+R KK     +L SWAV+S A  R   Q   E F   ++  M   GM   P+   PP+LL +R E +          R    AA  AA + FK   Q+I +     D++ YGE+KL SD+   +GI SQC+L KH+     QY+AN+ +K+N KLGG N +    LP V  + TI+FGADV HP   + ++PS+AAV ASMD    RH S +  Q HR E I +L  MV  L+  FYR    KP RI+F+RDGVSEGQF  VL YEV AI +AC ALEVGY P ITF++VQKRHHTRLF  NS D D+SGNV  GTVV+TGICHP+E DFYLMSH GLQGTSRP  YHVL +E  F +D LQ+L Y LC+ + RCTRSVS+ P+ YY+HLVAFRA+FF+  G D+            G     ++      ++H+++   MYFV
Sbjct:  387 RYPKLPCLHVGAPQKKNYLPMEVCHIMGGQKCPRKVTDNQVANMIKFTCTPPDQRKRSVEQKFLEAGFSRDPTLKAFGLDVEPRMVETTGRQLPPPTIEYSGGAREN---PRDGAWNMRGKKFNKPAQLTSWAVISMADARYCNQASIEQFFKAVMAQMGQLGMRCPPKV--PPVLLKQRREDS---------VRGMFQAAVKAATQTFKTTPQIIWMINPRMDAQTYGELKLMSDSEAGMGILSQCMLSKHIPKCSPQYIANILMKVNTKLGGMNGIISGPLPIVSQSRTIIFGADVTHPSPMDKTRPSVAAVTASMDANFIRHASSIRAQGHRVEQITNLKEMVIELMGQFYRQTRGKPERIVFYRDGVSEGQFHMVLNYEVTAIREACQALEVGYLPPITFVIVQKRHHTRLFPDNSKDADRSGNVKAGTVVDTGICHPIENDFYLMSHAGLQGTSRPTHYHVLLNEIGFSADELQMLTYKLCYTFARCTRSVSMVPSAYYSHLVAFRARFFLVDGSDTASTVS-------GSTDTTLETDCRMHNLHETMKGAMYFV 926          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A0L0HPF4_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPF4_SPIPD)

HSP 1 Score: 484 bits (1246), Expect = 6.650e-159
Identity = 258/516 (50.00%), Postives = 327/516 (63.37%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA-KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAE---RVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNA-VPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQF 1533
            QY   PC+ +G  AKH Y+PMEVC++  GQ+V  KL+EKQTADMI+ TCQ P +R   +   FN + +  N+  + F ++I  +     ARVLP P + Y    R+S+  P+ GSWNLRDKK+     L SWAVV F  ERE+     + F+ EL+      G+++     +PPI  A     +EA              L AA   A        QLILV         Y EIK  +DTV+GI +QC+  KHV  AK QY AN+CLKIN KLGG N  +   +LPFV + PTI+FGADV HP  G+ +KPSIAA+V SMD   SR+ + + VQ+ R+E+I+DL   V  LL +FY+   +KP RI+F+RDGVSEGQF EV+R EV AI +ACA L+  YRPT+TF++VQKRHH R F     D DKSGNV PGTVVETGI HP E+DFYL SH GLQGTS+P  YHVL DEN F +D LQ L Y LC++YCR TR+VS+ P  YYAHLVA RA+F
Sbjct:  317 QYEHFPCLVVGDPAKHVYLPMEVCRVVPGQRVLRKLNEKQTADMIRFTCQPPHVRSNKVSNGFNLLLTHDNEYLQDFNVKIGREMATVNARVLPTPILSYHPTSRESSIAPREGSWNLRDKKVAQGAVLNSWAVVVFGSEREVAVYNVQKFLRELISTCRDTGVDI--RQLQPPIRHANPLGNIEA-------------ILKAAFMDAGNASNHKPQLILVILPNTGVPLYAEIKRIADTVIGIATQCMQAKHVFAAKKQYCANICLKINVKLGGMNCFLGSAQLPFVAERPTIIFGADVTHPAPGDHNKPSIAAIVGSMDAQCSRYAAAIRVQKGRQEIIKDLGGAVVELLRTFYQFCGSKPQRILFYRDGVSEGQFGEVVREEVAAIRRACATLQEDYRPTVTFVIVQKRHHARFFPLRKEDADKSGNVLPGTVVETGITHPAEFDFYLASHPGLQGTSKPTHYHVLHDENHFTADGLQELTYRLCYLYCRATRAVSVCPPAYYAHLVAARARF 817          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: D0N1B9_PHYIT (Argonaute1 (AGO1) n=18 Tax=Phytophthora TaxID=4783 RepID=D0N1B9_PHYIT)

HSP 1 Score: 486 bits (1251), Expect = 6.820e-159
Identity = 264/561 (47.06%), Postives = 340/561 (60.61%), Query Frame = 1
Query:    1 QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVA-KLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTV--LGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            +YP LPC+ +G+  K NY+PMEVC I  GQK   K+ + Q A+MIK TC  PD R+ +I Q+F       + +   FG+ +  + ++T  R LPPP I+YS   R++   P+ G+WN+R KK     +L SWAV+S A  R   Q   E F   ++  M   GM   P+   PPILL +R E +          R    A   AA + FK   Q+I +     D+  YGE+KL SD+   +GI SQC+L KH+     QY+AN+ +K+N KLGGRN V   +LP V  + TI+FGADV HP   + S+PSIAAV ASMD    RH S +  Q HR E I +L  MV  LL  FYR    KP RI+F+RDGVSEGQF  VL +EV AI +AC  LEVGY P ITF++VQKRH+TRLF  N  D D+SGNV  GTVV+TGICHP+E DFYLMSH GLQGTSRP  YHVL +E  F +D LQ L Y LC+ + RCTRSVS+ P+ YY+HLVAFRA+FF+  G D+              D +  D       +HQ++ + MYFV
Sbjct:  388 RYPKLPCLHVGAPQKKNYLPMEVCHIMAGQKCPRKVTDNQVANMIKFTCTPPDQRKRSIEQKFREAGFNTDPTLRAFGLEVEPRMVETTGRQLPPPTIEYSGGAREN---PRDGAWNMRGKKFNTPAQLKSWAVISMADPRYCDQTSIEKFFKAVMAQMGQLGMRCPPKL--PPILLKQRREDS---------VRGMFQAGVKAASQTFKTPPQIIWMINPRMDAHAYGELKLMSDSEAGVGILSQCMLSKHIPKCNPQYIANILMKVNTKLGGRNGVISGQLPLVSASRTIIFGADVTHPSPMDRSRPSIAAVTASMDANFIRHASAIRAQGHRVEQIMNLKDMVVELLKQFYRQTRGKPDRIVFYRDGVSEGQFHMVLNFEVTAIREACRTLEVGYLPPITFVIVQKRHNTRLFPDNPKDADRSGNVKAGTVVDTGICHPIENDFYLMSHAGLQGTSRPTHYHVLLNEIGFTADELQTLTYKLCYTFARCTRSVSMVPSAYYSHLVAFRARFFLAEGSDTASTVSGFSETAPETDTRMYD-------LHQAMKSEMYFV 927          
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Match: A0A397UU01_9GLOM (Piwi domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UU01_9GLOM)

HSP 1 Score: 483 bits (1242), Expect = 1.550e-158
Identity = 260/562 (46.26%), Postives = 350/562 (62.28%), Query Frame = 1
Query:    4 YPSLPCVRIGSAAKHNYIPMEVCQIAQGQK-VAKLDEKQTADMIKITCQRPDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYSKFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYFVSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAARDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHVHTAKIQYLANLCLKINAKLGGRNA-VPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFV---NVGDDSXXXXXXXXXXXXGKDPKEIDWARCFSSVHQSLTNVMYFV 1674
            YP LPCV I    K NY+PMEVC + +GQ+   KL+EKQTADMIK TCQ+P +R   I +    +N   N   +QFG++++N+     ARVLP P +QY +  R+++  P+ GSWNLRDKK+     L SWAV++F  ER++Q Q  ++FV EL+      GM + P  T PPIL      AN +   + +  +  + A   A     K   QLIL          Y EIK  SDTV+G+ +QCV  +H+ +AK QY AN+CLK+N KLGG N+ +   ++PF+ + PTI+ GADV HP  G+ ++PSIAA+ ASMD   SR+ + + VQ  R+E+I DL+ M K LL +FY+    KP RI+F+RDGVSEGQF +VL  E++A+  AC  L+  Y+P +TF+VVQKRHH R F  +  D D++GN  PGTVVE+ I HP E+DFYL SH GLQGTSRP  YHVL+DEN F+ DSLQ L Y+LC+++ RCTR+VS+ P VYYAHLV  RA+F     N  D+             G   +    A  F +V   L  VMYF+
Sbjct:  310 YPFLPCVVI---RKENYLPMEVCDVIEGQRHTRKLNEKQTADMIKFTCQQPHMRANKIKRGLEILNYRSNPYLQQFGMKVSNEMAVVNARVLPTPTLQYHQSSREASFSPRDGSWNLRDKKVATGATLGSWAVIAFGSERDMQMQAIQHFVRELIITCQDTGMNI-PNRT-PPIL-----HANPHGDIEGSVKQAWVRAGNTA-----KSKPQLILCILPNTGVGLYAEIKRVSDTVIGVATQCVQSRHMFSAKKQYCANVCLKMNVKLGGMNSFILPAEVPFISERPTILMGADVTHPAPGDTARPSIAALCASMDAKASRYAASIRVQTGRQEIISDLSGMCKELLKTFYQTCGKKPDRILFYRDGVSEGQFSQVLEGEIKAVRAACRGLDANYKPKVTFVVVQKRHHARFFPMDRKDADRTGNCMPGTVVESQITHPFEFDFYLQSHAGLQGTSRPTHYHVLFDENGFNPDSLQTLSYNLCYVFARCTRAVSLVPPVYYAHLVCARARFHSRGENWNDND------------GTSEESTSTALTFGTVKPELQKVMYFM 844          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5349.13528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQK3_ECTSI0.000e+091.04Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A2S1PRW8_FUCSE0.000e+085.48Putative argonaute n=1 Tax=Fucus serratus TaxID=87... [more]
A0A024FT57_9STRA1.130e-16948.48Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A835Z8Z7_9STRA1.670e-16847.35Argonaute 1 n=2 Tax=Tribonema minus TaxID=303371 R... [more]
F0X160_9STRA5.650e-16546.87Argonaute2 (AGO2) putative n=1 Tax=Albugo laibachi... [more]
A0A0N7L6Z1_PLAHL2.510e-16247.24Argonaute 1 n=1 Tax=Plasmopara halstedii TaxID=478... [more]
A0A484EDI4_BRELC8.450e-16046.35Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0L0HPF4_SPIPD6.650e-15950.00Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
D0N1B9_PHYIT6.820e-15947.06Argonaute1 (AGO1) n=18 Tax=Phytophthora TaxID=4783... [more]
A0A397UU01_9GLOM1.550e-15846.26Piwi domain-containing protein n=2 Tax=Gigaspora T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5349contigL-elsbetiae_contig5349:142..10260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1037.3
Seed ortholog evalue2.5e-300
Seed eggNOG ortholog2880.D7FQK3
KEGG koko:K11593
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gene silencing by RNA
EggNOG OGsKOG1041@1,KOG1041@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03036
Exons14
Model size1677
Cds size1677
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5349.13528.1prot_L-elsbetiae_contig5349.13528.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5349 142..10260 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816555.5692806-CDS-L-elsbetiae_contig5349:141..2161622816555.5692806-CDS-L-elsbetiae_contig5349:141..216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 142..216 +
1691683644.4259605-CDS-L-elsbetiae_contig5349:141..2161691683644.4259605-CDS-L-elsbetiae_contig5349:141..216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 142..216 +
1622816555.5816638-CDS-L-elsbetiae_contig5349:1040..11641622816555.5816638-CDS-L-elsbetiae_contig5349:1040..1164Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 1041..1164 +
1691683644.4387426-CDS-L-elsbetiae_contig5349:1040..11641691683644.4387426-CDS-L-elsbetiae_contig5349:1040..1164Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 1041..1164 +
1622816555.5946608-CDS-L-elsbetiae_contig5349:1769..18731622816555.5946608-CDS-L-elsbetiae_contig5349:1769..1873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 1770..1873 +
1691683644.4491105-CDS-L-elsbetiae_contig5349:1769..18731691683644.4491105-CDS-L-elsbetiae_contig5349:1769..1873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 1770..1873 +
1622816555.6088028-CDS-L-elsbetiae_contig5349:2378..25101622816555.6088028-CDS-L-elsbetiae_contig5349:2378..2510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 2379..2510 +
1691683644.4589784-CDS-L-elsbetiae_contig5349:2378..25101691683644.4589784-CDS-L-elsbetiae_contig5349:2378..2510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 2379..2510 +
1622816555.6212442-CDS-L-elsbetiae_contig5349:3248..34271622816555.6212442-CDS-L-elsbetiae_contig5349:3248..3427Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 3249..3427 +
1691683644.4684606-CDS-L-elsbetiae_contig5349:3248..34271691683644.4684606-CDS-L-elsbetiae_contig5349:3248..3427Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 3249..3427 +
1622816555.6324904-CDS-L-elsbetiae_contig5349:4364..44791622816555.6324904-CDS-L-elsbetiae_contig5349:4364..4479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 4365..4479 +
1691683644.477292-CDS-L-elsbetiae_contig5349:4364..44791691683644.477292-CDS-L-elsbetiae_contig5349:4364..4479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 4365..4479 +
1622816555.6434145-CDS-L-elsbetiae_contig5349:5446..55721622816555.6434145-CDS-L-elsbetiae_contig5349:5446..5572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 5447..5572 +
1691683644.4868867-CDS-L-elsbetiae_contig5349:5446..55721691683644.4868867-CDS-L-elsbetiae_contig5349:5446..5572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 5447..5572 +
1622816555.656669-CDS-L-elsbetiae_contig5349:6138..62941622816555.656669-CDS-L-elsbetiae_contig5349:6138..6294Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 6139..6294 +
1691683644.5046523-CDS-L-elsbetiae_contig5349:6138..62941691683644.5046523-CDS-L-elsbetiae_contig5349:6138..6294Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 6139..6294 +
1622816555.6712935-CDS-L-elsbetiae_contig5349:6980..71091622816555.6712935-CDS-L-elsbetiae_contig5349:6980..7109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 6981..7109 +
1691683644.5197816-CDS-L-elsbetiae_contig5349:6980..71091691683644.5197816-CDS-L-elsbetiae_contig5349:6980..7109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 6981..7109 +
1622816555.68334-CDS-L-elsbetiae_contig5349:8140..82501622816555.68334-CDS-L-elsbetiae_contig5349:8140..8250Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 8141..8250 +
1691683644.5308356-CDS-L-elsbetiae_contig5349:8140..82501691683644.5308356-CDS-L-elsbetiae_contig5349:8140..8250Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 8141..8250 +
1622816555.697825-CDS-L-elsbetiae_contig5349:8733..88821622816555.697825-CDS-L-elsbetiae_contig5349:8733..8882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 8734..8882 +
1691683644.5419605-CDS-L-elsbetiae_contig5349:8733..88821691683644.5419605-CDS-L-elsbetiae_contig5349:8733..8882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 8734..8882 +
1622816555.711905-CDS-L-elsbetiae_contig5349:9270..93131622816555.711905-CDS-L-elsbetiae_contig5349:9270..9313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 9271..9313 +
1691683644.5525088-CDS-L-elsbetiae_contig5349:9270..93131691683644.5525088-CDS-L-elsbetiae_contig5349:9270..9313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 9271..9313 +
1622816555.7234106-CDS-L-elsbetiae_contig5349:9632..97321622816555.7234106-CDS-L-elsbetiae_contig5349:9632..9732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 9633..9732 +
1691683644.561847-CDS-L-elsbetiae_contig5349:9632..97321691683644.561847-CDS-L-elsbetiae_contig5349:9632..9732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 9633..9732 +
1622816555.734675-CDS-L-elsbetiae_contig5349:10125..102601622816555.734675-CDS-L-elsbetiae_contig5349:10125..10260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 10126..10260 +
1691683644.5726347-CDS-L-elsbetiae_contig5349:10125..102601691683644.5726347-CDS-L-elsbetiae_contig5349:10125..10260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5349 10126..10260 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5349.13528.1

>prot_L-elsbetiae_contig5349.13528.1 ID=prot_L-elsbetiae_contig5349.13528.1|Name=mRNA_L-elsbetiae_contig5349.13528.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=559bp
QYPSLPCVRIGSAAKHNYIPMEVCQIAQGQKVAKLDEKQTADMIKITCQR
PDIRQGAIHQQFNNINSEMNKSCEQFGIRITNQQIQTKARVLPPPCIQYS
KFGRQSTEVPQCGSWNLRDKKMFDNIKLVSWAVVSFAQERELQQQGAEYF
VSELVKVMTTHGMEVSPEATRPPILLAERVEANQYRVDDATYARNALTAA
RDAARKQFKQDCQLILVPKSTQDSKDYGEIKLASDTVLGIPSQCVLLKHV
HTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGA
GNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISF
YRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAIEQACAALEVGYRPTIT
FIVVQKRHHTRLFQPNSNDQDKSGNVYPGTVVETGICHPLEWDFYLMSHG
GLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVY
YAHLVAFRAQFFVNVGDDSSSESSSVVHGGGGKDPKEIDWARCFSSVHQS
LTNVMYFV*
back to top

mRNA from alignment at L-elsbetiae_contig5349:142..10260+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5349.13528.1 ID=mRNA_L-elsbetiae_contig5349.13528.1|Name=mRNA_L-elsbetiae_contig5349.13528.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10119bp|location=Sequence derived from alignment at L-elsbetiae_contig5349:142..10260+ (Laminarionema elsbetiae ELsaHSoW15)
CAGTATCCTTCCCTGCCGTGCGTGCGCATCGGCTCGGCGGCCAAGCACAA CTACATCCCCATGGAAGTTTGCCAGGTGAGCGGTATGTACAGTCAATACT CGGGTCTTGGATAGTCTCGTGGTGTGCCTGGGCGGGGTCACATCAGGCCA GCGCTGGATGTGTATGTATGTACTGCTGTTAGTACTGCTGCTGCTGCTGC TGCTGTCATAAATGTGGTTTTGAATGCTTTTGTTTTTTTTGTTCGTGGCT GTGTGCATGTTCCACTATGGAAGTTGGGTGTGGCTGCTCTACAATCTTTC GAATGCTGTGAGAGGTATTGCGCCTTGTGTGGGTTGTTCTGTGGCCTTGC TTGTCGTCGTTGTCACTGTTGTTTTTTGTGCGTTATCGTGCGTTATCGTG TCATGGGGCAAGTACCTAGTGTTCGAGTATTTTCCCGCTCCAGCGCTTGC TACTCACCCGTTACCTGTAGTGCCCGCCCGCTTGTGTCTGTTTGATTAAG GCTGCATTTGCGGTTGTTGTCCTCGCCGCCGCATCCGAAACCGTCACACA CCTTTCATCCAGCAGTAAATTACGTCCCAGGTTCCGCAACAACCCGACCG TTTTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCTCCCCCCTTCTTCCTTTCTTCCTCTCTCCCCCCTCCTTCTTCTCNNNN NNNNNNCCCCCGCCCGAAACCCCCCCACACCCCCCTCTCCGCGGATAAAT ACAGCTCCGGGTCCCTCACAACCCCCCCCGTTTTTCCCCCCCCCCCCCCC CCCTCCCTCGCTGCTTTCTTGGCGTTTTTTCTTCTTCTGGTTTTCGTCAC CCACCCCTATAATTACCCAAAATGACGAAACAAAAACATTTGAACTCAGA TCGCACAGGGGCAGAAGGTGGCCAAGCTTGACGAGAAGCAGACGGCGGAC ATGATCAAGATCACCTGCCAGCGGCCGGACATCCGCCAGGGCGCCATCCA CCAGCAGTTCAACAACATCAACAGTAAGACAAGACATGAGTATAATGCCT AAAACCTACAAGTATTATTTTATAAATATTCTTCTTAATGTCAGCGGCCA GAGCACGTCCAATCCGTGAAATAATCGTTCCAGGAGACTGTTGTGTGTAG ACACTATTCAGCTACCCTCCCTCACAATCCCCTATTTTTTTTTGTTGTGT TGGTACAAGTCTACCTTGTAGTGTACTCTGGCGCACACGGGCGCGGCAGT GCAGCAGGATACATGGCTTGCCCAAGTTGCAGGGACGGCATACCCTACAG GAGTACGACACGCCACTGCGTCACATATACATATCGCCGAGATCACGGGG CTGCTTTGTAAAAGCACGTCACCTGCAATGTGGAAGCGCCTGAGCCAAAT AGAGCAATCGAGAACCGTTTGCGTGCGGGGTGCCTGCCGTGCCTTGCGCA ACACAGGCGAGATGAGCGAGACGGGGTGTTTTGGGGCTTCGTCCCTGTTT CTGTTTTTTGTTTCGAAGCTAAATAAACATAAAATGCACAAAATCAGTGC GTCTGCTCTGCTGTTCAGGTTAAGCCGTGCTGATGTATGTGTGCATGTAC GCTATGCTGCTGGTGGTGCGTGTTTCAGGCGAGATGAACAAGAGCTGCGA GCAGTTCGGGATCCGGATCACCAACCAGCAGATCCAGACCAAGGCCCGAG TCCTCCCCCCTCCGTGCATACAGTACAGCAAGGTGGGATTTGATTGGTTT GGCCCGGTTTGGTTTGGTCTGGTCTGGTCTCGGCAGTGCAAGGTTTTGGT TTTTTGGTCTGGTTTGGGCAGTGCAAAGGTTTTCGTTTTGGGGGTCTTGG TTTGGGGTGGGGTGGTTGTGGTGTTGCTCAGGGGCAGAGCTTGTTTCTCA GCCCCTCGTGTGTGTGTGTGCATGTTTATGCATCTGGTCTCTTTTTCCGA GGTGCAAATAGTATTGCATTCCGTCTTGCCGTGCACGCCAGAAAGCCGCT GTCGTCATTGTCGTTGTCGTTGTAAAGGCTGCTGTTGTTTAACGCCGCCG TCGCTCTGTCGCTGCTGGTTTCGTCGCTGCTGTTTGTTTGGTTAGTTGGT TCGATGCTGCTTGTGTTTTCTCGCAACGACCTGCTTTTTCCCGGACTTCA TTAGAAACCTTTGCCCCCGGTTTGTTTGATTGTCACGTCAACGTACGCGT GCCTCGGGTCGAAAAATCACGAAAACAAAAATTGCAGTTTGGACGGCAGT CGACCGAAGTCCCGCAGTGCGGGTCCTGGAACCTCCGCGACAAGAAGATG TTCGACAACATAAAGCTCGTCAGCTGGGCGGTCGTTAGCTTCGCCCAGGA GAGGGAGCTGCAGCAACAGGTGATTTTTTTTTTTTTGTGTAACTTCGTGG TCGGACACGTTTTTGCGCGTGACGACGACGAAGATGCTGTGCTGGTGAAC CTGTTGCTCGGAGCGATGGAAAGCAATGGATGCGACGCACCGCTAGTGGG GGGAGGGGCATGGCGCGGTAGTTTCGCGCGGCGACGCTGTCGCTTGAGCG CGTATTGTGCGAAGTGCCTCTGTGGTGTGTATGCGTTGCACCTTCTTGCT GGGTGGGGGCGGGGGAGGGTGACAAATGGTCCTACGGGGTACATGTAGTA TAGTCAGAAATCAGAGCGAACGTGTCCCGGTTGTCACGGGGCCCGACGTG AAACTCCACGCATACTCCAAAGCACCTATTACCTGCGCACAGCAGAACAG GGAGGCAATCCACGGATACATAGCGCGACGAGCGACGCCCGGCTCTCGTT TCCCCCCCCCTCCCCGTGTTGTATTCGGGGTTTCGTAAACAGCAGGCGTC GGTTTTGTTCCGTCTCTTCCGCGTGTGGTTTGATGCCACACTTCTGTTTT GCGTCGCGACGGCGATTGATTGGCATCATTATGCCGTGTTGTCTTGTCCT CGCGTCCGTCTCCACCAACCACACCCTCCGCCCGCATCATCGTCATCGTC CCATAGATACGAACGTACCCCACCGACCAACCAACCAACCAACCAACCAA CCAACTACCCTGCTTTGCCCTTCCCTGACCTGGCTGGCCTGCTGCTGCGC ACCAAAGGGCGCGGAGTACTTCGTGTCGGAGCTGGTGAAGGTGATGACCA CCCACGGCATGGAGGTCAGCCCCGAGGCGACGAGGCCACCGATCCTCCTG GCCGAGAGGGTCGAGGCGAACCAGTACCGCGTGGACGACGCCACCTACGC GAGGAACGCCCTCACCGCCGCCAGGGACGCCGCCAGGTCTGGTCTCGTCT GGTCTCGTCTGGTCTCGTCTGGTCTTGTGTGGTCTCGTCTGGTCTCGTCT GGTCTGGTGTGGTCCGAGCTGTCCCATTTACAAGACACAGACCACCCTTC CTTCCCCTTCCCTTCCCTCGTGTTTTGAGCTTTCCGAACCGTAACCCCGA TCGCCGCTCAGCCGCCGCAAGGTCTTCAATGTCAGCGCCTCCAGCGAATC TTATATTGTTAGCTTTTTTATGTAGCTGCCGGGCTGTTTGTCTCGCGAAG GTGGTCGGGGAAGGGGAGTTAATGGGTTTGGAGTGCTTATCGGGTATAAA GCATTGGCAGATAGAGGTGCATGGCACCACAAGATGCTGCGGGGACTGCT GTGCTGTGTGATGCGTGTTATGTATTTATGTATGTTGTTCGATTCGAAGA CTGGCTTGAGCAGGGCACGATCATTCATTCTTAAAATAAAACAAAGAATC AAAGATGGAACCTAACCCATACTAGAGCAAAGACTCGATATGGGGTTCAA ACGGTATTCCATACAGAGACGTAATGCTTGGCGAAGCGAGCAGAAAAAAC AACCTAAATATCAGATTCATTCTTGTTGCTTCGAAGTGATGCCCCAATGG CTTATGTTGCCTGCTGCGCGTCGGTTGTGTGTGGGAGTGTTGTGGCTCGA AGAACCTCCTCTCCGGCGTGGTGACGATTAGCTTTTCTTGCCTCTTGCGT CACGTGGTGCAATACTCGGGGGTTATTTCTCAGCCTAAATCTCCAATCGT TGTATCCCGTTTTGTTGAAAACATTGTTCTCTCTATTGTACATCTATGTA AGTACTGCTGTGAAAACTCTTCTTTTTTGTTCTCCTTTTCCGTGAATGTC CTTTTTTTCTCGCCTCTGTCTATTCTGTTGTTGGCATGGTGTTATATTTT TATGTTGGGCTTTGTTAAAACAGGAAGCAGTTCAAGCAAGACTGTCAGCT GATCCTCGTGCCGAAGAGCACCCAGGACTCGAAGGACTACGGCGAGATCA AGCTCGCGTCGGACACGGTGCTCGGCATCCCCAGCCAGGTCTGTGTGTGT GTGTATTTTTAAATGTCTTACCAATGTCAGCGGTCTACTTACGTACGTCC AACCTGTGAACAATGAAAAGAGGCGTTCGAAGGGGGACTGCTGTTGTAGA CACACTACATAACCCTCCCTCACACCGCCCCTAACTACTGGCACAAAGTC AGCAAGCCGCACGCACACCCACAGTTCGTGGCTTTATTGTCCGCGGAGTG CTTGCTGTGGGAGTAATTTATGGTATTTTTGTGACCGTGTCTCAGTACCG GGGGGGCCCGCTGATAAGAAAACCTGAAATCGGGCCTCCAGGTTGATCTT ATTTCTGTTGGGTTGGGAAGTTGAGCGTAACACCTTCTTTATGTAGTACC TGTACGGGATTTCGGCGTGGCGCTCGCCGCACAGGCTGGGCGCTCTCTTA ATAGTTTGAGAATCTCAGGCTGGCTTTGTTATTGGGAGATTTCTTTTCTA TGAAGCGGGGGCCGGTGGTGCGGTAGCTGTTGTTGTTTTTGGTGTGTTGT GGTACATATATTCTTGGATGTTGTTTGTGTTGGCGATCGATTAAAGCGCG GGTTAAAAGGAAATCTGCTGCGTGCCCGATGTAACTGACTGGGTGGAACG TTTTAGTTGTATTTAGTTTCTGAGAGTGGAAAAACGAAAATGGCTTTTTT TGCTTTATACCCACGCATGTCAAGGCGGAACACGACAACGGGAGACGCTT GGGCTGGCTTTATATTCTATTCTCTACCGTGGGTCTGGCACCATCCACCT GCCAGCTTGCTTACTCGCCTGCCCTTCTCGCCCCCCCCCCCCATCGCGTA CGTCGGCCCCGTCTCCCGACGGAAATGGAATAACATTCCTCAGCGCTCTC AAAAGAACGGACAACCGACCTCATCGCGTACGTCGGCCCCGTTCTCCGGT GGAAATGAAATCACCGTCATCATCGATCCCCAACGACGGCACACGTAACT AACAGTGCGTGTTGCTGAAGCACGTCCACACGGCGAAGATCCAATACCTG GCCAACCTGTGCCTCAAGATCAACGCCAAGCTGGGCGGCCGCAACGCCGT GCCGAGAGACAAGCTCCCCTTCGTGCAGGACGTGAGGGTTAGGGACGCAT TTGCGTTGTTGTTGTTGTTGCTGATGTTGTTGATGCCGACGATACTGTTG ATTACCAAGTTGTTGTTGTCTTGATTTTGAGGCAAAGGCCTTGTAAGGAA TGTTGCGATAGGAAATGTCCCCCGAGACGGCCGAAGGAGATGGACAAGAA GGTACGGACGGTCACACAGCAGTGGAGGAATCAGGACGGGCTGGCACACT TTTGGTTTAGGGTTTTCTCGAGGCCAGGAGACAGGACAACCAGTTTCCAT GCCGTTGAAGCTGGCGTTGTATATATCTGCATAGTTTTGTGGTTTGGTTT TTACGTACATAGTATGTTGGCGTTTGTTGTCGAAGGGTGCGCGGGAGGGG TCACGAAAGTTTCCGCGTTCGTGTACAAATAAATGTATTATGTACATAAT CGGTGTCAGCCTCGATTGCCGCCCCCTCCCCCCCCCCCCTCTCTCCTTCG TTTTCCCAATATTTGTGTTTAATCAAATCGCACTCTTACGTACATACCAC GCAACCGCTCTCCCTACTGCTGTCTGCTGCTGTCTGCTGCTGTTCAGGCT CCTACGATCGTGTTCGGCGCGGACGTGAACCACCCCGGCGCCGGGAACGT GTCGAAGCCGTCGATCGCCGCCGTCGTGGCGAGCATGGACCGATGGGTGT CGAGGCACGGGTCGTGCGTCGCTGTGCAGGAGCACCGGAAGGAGGTCATC CAGGTTTGTACTTGGAAAGGTTACTTGAAATGTTATTAGTCAGTTAGGTG GTTACCGTAATCCGCTCTAAGTTCCCCCCGGAGCTTTGAGCCCCCCCCAC CCCCCACCCCCATCACAGTTTCGGCCTGGAAGCATGATTTCTCTGAGTTC CCGTCCCCGGGGGGGGGGATTGTTTTTTTTGTTTTTTTCACAAAAAAAGA AACATCCCCTGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGTTGG TGGGTGTGTTTTTTTTTTTTTTTTTTTTTTTTATAGCGTGTCTGGGGGTT GGAGAAGGAAATCACAAGGTGGGTGACGTGGGTGACGTGGGAGGCGAAGA GGTGGGGGGTGAAAGATTTTGCCTCTTGGCCGCCTACCGTTGGAAATAGT GTTAAGGGCTGGAAGCCGACGAACCCCGTTCATGTCTTCTCCGCGATAAA TACACACACGAACGGAACTGCAGGCGTAACTCGCTCGTTGTCTCTTTTTG TCTTTTGGAAAAGACACACACCCACGCACACACGCACGCACACACACATG CGCGGGCGGGCTGGCTGGCTTACATTACCAAGCTCAAGCGTTCGTTTTCG TGTGATGAGGAACCAAACGAAACTCGTTGACTTGAACAAAAATCACACCA CCAACACGTGGTGTTCAATCGAATCAAATCGCACCCCAGGACCTGGCATC GATGGTGAAGAACCTGCTGATCTCGTTCTACCGCGTCAACAACGCCAAGC CGGCCCGCATCATCTTCTTCCGGGACGGCGTCAGCGAGGGGCAGTTCCGG GAGGTTCTCCGCTACGAGGTGAGTGAGAAGAGCTTTTCCTGCAGCAGAGG CCCACCAACTCTGCAAGAAAAAGTGGCTGTGGGGGGTTTTTCACTCTATT TCCTAGATAAATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTT TTTTGAGTACGGGATGGGGGTGCAGCCAACCCCCCAACACCACANNNNNN NNNNAAGGTGGCTGTGGGGGGTTTTTCCCTCTATTTCCTAGATAAATCCC CCCCCCCCCCCCGCTCTACCCCCACAGCTGTTTTATTAGAATTGGGGGCT ATACTGCAAGCCTCCACCACAGCTAGTAAGTACCGTAGTACGCATGAGAG AAGAGTACATACAGATGGTGACGTGGATGGGTATCTACCGGATTGTATGT TGTCTTCACATTAAAAACCGTTCCGATCTCTCCATCCAGTACCTCTCAAT GTCCGTACAACTCCAACACTTGATTGGGCACGCTTTTTGTTGTTTGTATT TTGGCAGTTTGTGGGTCGGTTTGGAGCGCCTCCGTTGCGGTGGTCCGACG CGCGGTTTCAAGGCGTGTGCGAAAGTGAAAAGTACAACAACCCTCAGGAG GGTTTTGGATTTGTGGTGGTCGGTTGGATGGGTGGAGACGCAGAGGCTCT GGTTGGGAACGTTTCGAGCATCGAATAAAAGCTTCCGTGGTGGTTGATCG GAGCCTCTGCTGATGGTGCTTGATTTCCGTGGGTTAACTGTCTGCCCGGC ATTTTTTTAAGTTGCCGTGCTGGTGCAGCAGTGGATTTGCGGGCTTTTGG GGGGCGATTCGAACTACCATACCTATTAGCAGCCGTGGCGCTGCCCGAAA AAGATTTATGTTGTTACCGGCTCAGTTTATTCCGTCGACCTCTCCAAGTC CTGTTGCCTACGACGAACTAACTGCCCGCGACCCGCTGTTCCCGGCCCGA GAACGTAACGAGTGTTTTTTTCGTGCGTGTGCTCGCTTGCCTGCCTGCCT GCCTGCCTGCTTGCCTGCCTGCCCCCGGTGCTGCCCGTTGTTGCGTCAGG TCCGAGCCATCGAGCAGGCGTGCGCGGCGCTGGAGGTCGGCTACCGCCCC ACTATCACCTTCATCGTCGTGCAGAAACGCCACCACACGCGACTTTTCCA GCCGAACAGGTCAGTGAGTTCAGTCATTCACTCAGTCACCGATGTACATA TGTATGTATGTACATTAGACTTGTACGTTGTAGCCAAGAGAGACGAGGTT CCAATAAATGTACATGGAAACGATATACATATACTTCGTACATCCATACG CGCCTGTGAACACACTTTTTTTTTATCATTTTCTGTTTTCGCTAATTTTT ATTTTTTTATGTAAACTACGCTGTGTGGCCGCAGGATTTCCGCGGCTGTT GTTGTTGTTCGTGCTTGTGGTAGTTTCTCGTTGAGCTACATATGTGTGTA GTATGTAGTGACTTGTCGAGGCCGCTCTTTATGCACTTTGTTTCCGTAAA GCCGGGCCTGAAATGCTCAACGCCGTTGGCGTTGTTCTTGGTGGATAAAG TGGCTGGTGTTCTAGACGAACGGAAATCACAGCAGTAGTAACTAGGTCCT CTCCTCCTTTCCCGGTCCCTTCCTTTTATTTTTATTTTTCAGTAATGACC AGGACAAGTCCGGCAACGTGTACCCCGGTACCGTGGTCGAGACTGGCATC TGCCACCCCTTGGAGTGGGACTTCTACCTCATGTCCCACGGAGGGCTGCA GGGGACCTCCCGCCCGGCCAAGTACCACGTGCTCTGGGACGGTGAGATGA AGGGAGGGGAGGTCTTGCTGTCGCTCTTGCACTGGATTTTCGCTTTTTTT GTCACGTAGGGAAGGACTCTGAGACACGCCTGCACTGTTGCCGCTACCGT TCGACACATGAACCACCTTTTTTGTTTTGACAACATGGAGATACAGCAGC CAGCATTAATACGGTATTTTTTATGTGCGTAAGAGTATATACTTAGCACC GCGCTTTCCCGCCAAACCGTGTGTTTTGCTAAAACACCCGCGCGTGCTCT CTCCCTCGCCCCCTCCCTACTTCCCTCGCTCTCTCTCTCTCTGTCTCTCT CTCTGTCTGCCTCTCGTTTGTCGTGTTTTGGCCTCGCTTTCTCGTTTGCT CTTTTTTGTTGCCTCGTTGTAATCTCCAGAGAACGCCTTCGACTCGGACT CTCTGCAGCTGCTGTGCTACCAGTGAGTCAGTCGAAGCCGCGGTCTGCGC TGTCATACCCCGCGACGATATGAAAGGATTCCGGGTTATGGTCACTGCAT GTTGGCTTGCACCGTGGCATGCATGCTCCGCATGCCCAGCCCGTATATAG ACTATTTTCCTCCAAGCGCCAAGGATAAATAAACGCTCCATATGTAATGT ACGTTTGCAGCCTGGCTCAAATTTGCTGTGATGTGTCAAAAGTTTGTAGT TCAACACGTACATCCCGTCCTCTCTTTTGGAGTGTCCCCCGCCCCACCCA ACCTCCCTCTCCTCCGCTTTTTCGGTGGTCTTTTCTTGCAGCCTGTGCTT CATGTACTGCCGGTGCACCCGCAGCGTGTCCATCCCGCCCGCGGTGTACT ACGCCCACCTCGTCGCCTTCCGCGCTCAGTTCTTCGTCAACGTGAGCCAT ACAACGCACGCACACACGTACACACCGTAAGCCTGCCGTGTGTACGAACC AACAAGCATGATGTTTGTACGTGTAAATACATGTGTATTTGACGTGTCTC TCGTGGCCTGGGTATTGAGCCCGAAAACGTAGCTTTGCCCTTTTTTAACC AGCTATTTACTTCTATTGTTTAGGACCATGTGTAGCGTGGCTCCTGCGGC CCCGAGGCTCGCCCACCGCTTTAATTCTGTCTAAACCTCGCGCTCGCCTC TATTGCATCCGAAGCTGTTCCGAGCGGGGGCGGGTGCTCTTCGGACCGGG CTTTCAAGTGTAGTGTTGTACCCGCACAGCTCAATTCCTTTTCAAATGTT GATCATTGTTGCGGGGGGGGCGGGGGCGTTTCAGGTGGGCGACGACTCCT CCTCGGAATCGTCCTCTGTCGTGCACGGCGGCGGCGGCAAGGACCCCAAG GAGATCGACTGGGCCCGGTGCTTCAGCTCGGTGCACCAGAGCCTGACCAA CGTCATGTACTTCGTCTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5349:142..10260+

>mRNA_L-elsbetiae_contig5349.13528.1 ID=mRNA_L-elsbetiae_contig5349.13528.1|Name=mRNA_L-elsbetiae_contig5349.13528.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3354bp|location=Sequence derived from alignment at L-elsbetiae_contig5349:142..10260+ (Laminarionema elsbetiae ELsaHSoW15)
CAGTATCCTTCCCTGCCGTGCGTGCGCATCGGCTCGGCGGCCAAGCACAA
CTACATCCCCATGGAAGTTTGCCAGCAGTATCCTTCCCTGCCGTGCGTGC
GCATCGGCTCGGCGGCCAAGCACAACTACATCCCCATGGAAGTTTGCCAG
ATCGCACAGGGGCAGAAGGTGGCCAAGCTTGACGAGAAGCAGACGGCGGA
CATGATCAAGATCACCTGCCAGCGGCCGGACATCCGCCAGGGCGCCATCC
ACCAGCAGTTCAACAACATCAACAATCGCACAGGGGCAGAAGGTGGCCAA
GCTTGACGAGAAGCAGACGGCGGACATGATCAAGATCACCTGCCAGCGGC
CGGACATCCGCCAGGGCGCCATCCACCAGCAGTTCAACAACATCAACAGC
GAGATGAACAAGAGCTGCGAGCAGTTCGGGATCCGGATCACCAACCAGCA
GATCCAGACCAAGGCCCGAGTCCTCCCCCCTCCGTGCATACAGTACAGCA
AGGCGAGATGAACAAGAGCTGCGAGCAGTTCGGGATCCGGATCACCAACC
AGCAGATCCAGACCAAGGCCCGAGTCCTCCCCCCTCCGTGCATACAGTAC
AGCAAGTTTGGACGGCAGTCGACCGAAGTCCCGCAGTGCGGGTCCTGGAA
CCTCCGCGACAAGAAGATGTTCGACAACATAAAGCTCGTCAGCTGGGCGG
TCGTTAGCTTCGCCCAGGAGAGGGAGCTGCAGCAACAGTTTGGACGGCAG
TCGACCGAAGTCCCGCAGTGCGGGTCCTGGAACCTCCGCGACAAGAAGAT
GTTCGACAACATAAAGCTCGTCAGCTGGGCGGTCGTTAGCTTCGCCCAGG
AGAGGGAGCTGCAGCAACAGGGCGCGGAGTACTTCGTGTCGGAGCTGGTG
AAGGTGATGACCACCCACGGCATGGAGGTCAGCCCCGAGGCGACGAGGCC
ACCGATCCTCCTGGCCGAGAGGGTCGAGGCGAACCAGTACCGCGTGGACG
ACGCCACCTACGCGAGGAACGCCCTCACCGCCGCCAGGGACGCCGCCAGG
GCGCGGAGTACTTCGTGTCGGAGCTGGTGAAGGTGATGACCACCCACGGC
ATGGAGGTCAGCCCCGAGGCGACGAGGCCACCGATCCTCCTGGCCGAGAG
GGTCGAGGCGAACCAGTACCGCGTGGACGACGCCACCTACGCGAGGAACG
CCCTCACCGCCGCCAGGGACGCCGCCAGGAAGCAGTTCAAGCAAGACTGT
CAGCTGATCCTCGTGCCGAAGAGCACCCAGGACTCGAAGGACTACGGCGA
GATCAAGCTCGCGTCGGACACGGTGCTCGGCATCCCCAGCCAGGAAGCAG
TTCAAGCAAGACTGTCAGCTGATCCTCGTGCCGAAGAGCACCCAGGACTC
GAAGGACTACGGCGAGATCAAGCTCGCGTCGGACACGGTGCTCGGCATCC
CCAGCCAGTGCGTGTTGCTGAAGCACGTCCACACGGCGAAGATCCAATAC
CTGGCCAACCTGTGCCTCAAGATCAACGCCAAGCTGGGCGGCCGCAACGC
CGTGCCGAGAGACAAGCTCCCCTTCGTGCAGGACTGCGTGTTGCTGAAGC
ACGTCCACACGGCGAAGATCCAATACCTGGCCAACCTGTGCCTCAAGATC
AACGCCAAGCTGGGCGGCCGCAACGCCGTGCCGAGAGACAAGCTCCCCTT
CGTGCAGGACGCTCCTACGATCGTGTTCGGCGCGGACGTGAACCACCCCG
GCGCCGGGAACGTGTCGAAGCCGTCGATCGCCGCCGTCGTGGCGAGCATG
GACCGATGGGTGTCGAGGCACGGGTCGTGCGTCGCTGTGCAGGAGCACCG
GAAGGAGGTCATCCAGGCTCCTACGATCGTGTTCGGCGCGGACGTGAACC
ACCCCGGCGCCGGGAACGTGTCGAAGCCGTCGATCGCCGCCGTCGTGGCG
AGCATGGACCGATGGGTGTCGAGGCACGGGTCGTGCGTCGCTGTGCAGGA
GCACCGGAAGGAGGTCATCCAGGACCTGGCATCGATGGTGAAGAACCTGC
TGATCTCGTTCTACCGCGTCAACAACGCCAAGCCGGCCCGCATCATCTTC
TTCCGGGACGGCGTCAGCGAGGGGCAGTTCCGGGAGGTTCTCCGCTACGA
GGACCTGGCATCGATGGTGAAGAACCTGCTGATCTCGTTCTACCGCGTCA
ACAACGCCAAGCCGGCCCGCATCATCTTCTTCCGGGACGGCGTCAGCGAG
GGGCAGTTCCGGGAGGTTCTCCGCTACGAGGTCCGAGCCATCGAGCAGGC
GTGCGCGGCGCTGGAGGTCGGCTACCGCCCCACTATCACCTTCATCGTCG
TGCAGAAACGCCACCACACGCGACTTTTCCAGCCGAACAGGTCCGAGCCA
TCGAGCAGGCGTGCGCGGCGCTGGAGGTCGGCTACCGCCCCACTATCACC
TTCATCGTCGTGCAGAAACGCCACCACACGCGACTTTTCCAGCCGAACAG
TAATGACCAGGACAAGTCCGGCAACGTGTACCCCGGTACCGTGGTCGAGA
CTGGCATCTGCCACCCCTTGGAGTGGGACTTCTACCTCATGTCCCACGGA
GGGCTGCAGGGGACCTCCCGCCCGGCCAAGTACCACGTGCTCTGGGACGT
AATGACCAGGACAAGTCCGGCAACGTGTACCCCGGTACCGTGGTCGAGAC
TGGCATCTGCCACCCCTTGGAGTGGGACTTCTACCTCATGTCCCACGGAG
GGCTGCAGGGGACCTCCCGCCCGGCCAAGTACCACGTGCTCTGGGACGAG
AACGCCTTCGACTCGGACTCTCTGCAGCTGCTGTGCTACCAAGAACGCCT
TCGACTCGGACTCTCTGCAGCTGCTGTGCTACCACCTGTGCTTCATGTAC
TGCCGGTGCACCCGCAGCGTGTCCATCCCGCCCGCGGTGTACTACGCCCA
CCTCGTCGCCTTCCGCGCTCAGTTCTTCGTCAACCCTGTGCTTCATGTAC
TGCCGGTGCACCCGCAGCGTGTCCATCCCGCCCGCGGTGTACTACGCCCA
CCTCGTCGCCTTCCGCGCTCAGTTCTTCGTCAACGTGGGCGACGACTCCT
CCTCGGAATCGTCCTCTGTCGTGCACGGCGGCGGCGGCAAGGACCCCAAG
GAGATCGACTGGGCCCGGTGCTTCAGCTCGGTGCACCAGAGCCTGACCAA
CGTCATGTACTTCGTCTGAGTGGGCGACGACTCCTCCTCGGAATCGTCCT
CTGTCGTGCACGGCGGCGGCGGCAAGGACCCCAAGGAGATCGACTGGGCC
CGGTGCTTCAGCTCGGTGCACCAGAGCCTGACCAACGTCATGTACTTCGT
CTGA
back to top