mRNA_L-elsbetiae_contig5315.13483.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A6H5KLX6_9PHAE (Mpv17 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX6_9PHAE) HSP 1 Score: 289 bits (740), Expect = 1.120e-97 Identity = 140/184 (76.09%), Postives = 156/184 (84.78%), Query Frame = 1 Query: 1 MNAVRGALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLSSAGFAGPEGG 552 MN ++ A ARHP LF SVVGY VF SGDVMAQRL A + +WD+RRSLSIGLLG+VQNGFLLR+WYRTLDKFVTP+TD+KSVLKKIA DEAVFAPQLACSYLATSAYIQSPG+W AV +N++ K TTWQ+DLKLWPMANLIGFSLVPR IRPLYAS VQL+WQCYLS+AGFA P G Sbjct: 1 MNVIKEAYARHPGLFQSVVGYGVFASGDVMAQRL-------ADPDLEWDHRRSLSIGLLGVVQNGFLLRVWYRTLDKFVTPQTDLKSVLKKIAYDEAVFAPQLACSYLATSAYIQSPGNWEAVGENIKGKAFTTWQDDLKLWPMANLIGFSLVPRSIRPLYASSVQLVWQCYLSTAGFAAPSDG 177
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A835Z911_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z911_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.570e-68 Identity = 100/174 (57.47%), Postives = 126/174 (72.41%), Query Frame = 1 Query: 1 MNAVRGALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLS 522 + +++ A ++P+ FN++VGYSVF SGD MAQ+ E W+Y+RSLS+G LG +QNG + WYR LD+FVTPKTD SV+KKI CDEAVFAPQLA SYLATSAY+ PGDW V +NV+ K + TW ND+KLWP+AN GFS VP +RP YAS +QL+WQ YLS Sbjct: 3 LRSLKAAYNKNPLPFNTLVGYSVFASGDAMAQQFIEECEV-------WNYKRSLSMGCLGAIQNGLFMTAWYRILDRFVTPKTDPVSVIKKICCDEAVFAPQLAVSYLATSAYVARPGDWGYVRENVRTKALETWSNDMKLWPIANFFGFSFVPIAVRPAYASAIQLVWQTYLS 169
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: D3BJS0_POLPP (Pmp22 family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BJS0_POLPP) HSP 1 Score: 96.3 bits (238), Expect = 7.040e-20 Identity = 59/180 (32.78%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 19 ALARHPVLFNSVVGYSVFVSGDVMAQRLD-VMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDL--------KLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLSSAG 531 AL HP++ S+ + +GDV+AQ ++ ++ ++KWD +R+L++ +G+V +G L WY+TLD+ V + + V KKIA D+ FAP + +++ +I N+++ ++ +TT + DL LWPMA +I FS+VP +R LY S V + W +LS G Sbjct: 363 ALDSHPLITKSITTGVLMGTGDVLAQSIEHYTNDDKHKKKFKWDTKRTLTMTSVGMVFSGPCLHFWYKTLDRLVVGEGAMV-VAKKIAFDQIAFAPVVISAFI----FIM-----NSINGKTPSQSLTTIKTDLPSALKANWSLWPMAQIICFSIVPPSLRVLYVSTVSVFWNIFLSQLG 532
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A2V3J0E7_9FLOR (PXMP2/4 family protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E7_9FLOR) HSP 1 Score: 94.4 bits (233), Expect = 9.500e-20 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 16 GALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIW 507 GAL R P+ ++ ++ GD++AQ+L E E+ WD RRSLSI L G+V G +L WY TLD+ K ++ K+ D+ VFAP +++ ++ ++DN++ K+ + + LWP A ++ FS+VP+ + +Y + V LIW Sbjct: 159 GALVRTPLRTKAITTSALAFIGDLLAQKLSQADEK----EYSWDKRRSLSISLWGLVFMGPVLHYWYLTLDRLFRHKY---AIFTKLLSDQLVFAPCFNAAFMLGIGALEG-NSLKDIADNIKAKLWPVMKANWTLWPAAQVVNFSIVPKDFQVIYVNCVALIW 314
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A7M7GQA6_APIME (protein Mpv17 n=4 Tax=Apis TaxID=7459 RepID=A0A7M7GQA6_APIME) HSP 1 Score: 87.0 bits (214), Expect = 4.420e-18 Identity = 49/170 (28.82%), Postives = 82/170 (48.24%), Query Frame = 1 Query: 13 RGALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLS 522 R + R+P++ + + GD +AQ + + D+ R+ G +G G + R WY LDK++ KT I +VLKK+ACD+ +FAP L T +Q D+ + + N+ + N+ K+WP+ LI F +P + L V ++W Y+S Sbjct: 9 RRVVTRYPIIIQATQAGILMALGDQIAQNFIERKKFK-----ELDFLRTAQFGSIGFFITGPVTRTWYGILDKYIGSKTGI-AVLKKVACDQLIFAPAGLGIVLTTIGLLQGK-DFEQIKTKLSNEYLDILLNNYKIWPIIQLINFYFIPLQYQVLLVQSVAILWNTYIS 171
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A293M2V1_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M2V1_ORNER) HSP 1 Score: 82.8 bits (203), Expect = 1.730e-16 Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 22 LARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLS 522 + +HP V + ++GDV+ Q+L + K D R+ ++G+ G +LR WY L+K V+PK + LKK+ D+ F P +L +Q W + V+ + + LWP A ++ FS+VP R +YASGV LIW YLS Sbjct: 13 MQKHPAKTQVVTTGVLMLTGDVVCQKL-------IEKKRKVDIERAARFFVIGVGFVGPVLRTWYLCLEKLVSPKGRMIP-LKKMLFDQGAFVPVFLPCFLTCLGVLQRQS-WPEIKIKVKTDYIPVLIANYVLWPAAQMVNFSIVPLQYRVVYASGVALIWNIYLS 170
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: UPI0008405655 (protein Mpv17 isoform X1 n=2 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008405655) HSP 1 Score: 82.0 bits (201), Expect = 3.550e-16 Identity = 55/177 (31.07%), Postives = 85/177 (48.02%), Query Frame = 1 Query: 13 RGALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWK-WDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQ---CYLSSAG 531 R L+++P++ +V ++ GD +AQ + +WK D+ R+ G +G G LR WY LDK + K + VLKK+ CD+ +FAP L+T +Q D + ++N+ +N+ KLWPM LI F +V + L V L W CY +S G Sbjct: 15 RKLLSKYPLITQAVQAGTLMALGDQIAQNVV------ERRQWKDLDFVRTAQFGSIGFFVAGPTLRTWYGILDKRIGSKGGLV-VLKKVCCDQLLFAPSFLAVLLSTIGILQG-NDLEQLKVKLRNEYPDILKNNYKLWPMVQLINFYVVSLQYQVLVVQVVALFWNTYICYRTSLG 183
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A6P3YCY3_DINQU (protein Mpv17 n=2 Tax=Ponerini TaxID=141711 RepID=A0A6P3YCY3_DINQU) HSP 1 Score: 81.6 bits (200), Expect = 4.280e-16 Identity = 53/168 (31.55%), Postives = 78/168 (46.43%), Query Frame = 1 Query: 19 ALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLS 522 AL ++PV +V + GD +AQ + DY R++ +G++ G R WY LDK++ K I + KK+ACD+ +FAP L T Q D + + N+ N+ KLWPM L+ FSLVP + L V L+W Y+S Sbjct: 11 ALRKYPVGTQAVQAGILMGLGDQIAQNFIESNSKPI------DYVRTMQFAGIGLLITGPATRTWYGILDKYIGSKGYIVGI-KKVACDQLLFAPTFIAVLLITIGVCQGK-DVEKLKTKLANEYSDILINNYKLWPMVQLVNFSLVPLNYQALVVQSVALLWNSYIS 170
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: UPI00130424E5 (protein Mpv17 n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI00130424E5) HSP 1 Score: 80.5 bits (197), Expect = 1.080e-15 Identity = 47/167 (28.14%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 22 LARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLS 522 L ++P+ +V ++ GD +AQ L + DY R++ G +G G + R WY LD+++ K VLKK+ CD+ +FAP L+ +Q D + +QN+ +++ K+WPM L F +P + L V L+W Y+S Sbjct: 12 LIKYPLRIQAVQAGTLMALGDQIAQNL-------VERKKDLDYIRTIQFGSIGFFIAGPVTRTWYGILDRYIGSKGGTV-VLKKVCCDQLLFAPAFLLVLLSVIGILQG-NDTQNLKTKLQNEYPDILKSNYKIWPMVQLFNFYFIPLQYQVLIVQSVALLWNTYIS 169
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Match: A0A8J2MXV9_COTCN (Similar to mpv17: Protein Mpv17 (Danio rerio) n=1 Tax=Cotesia congregata TaxID=51543 RepID=A0A8J2MXV9_COTCN) HSP 1 Score: 80.1 bits (196), Expect = 1.660e-15 Identity = 50/170 (29.41%), Postives = 82/170 (48.24%), Query Frame = 1 Query: 13 RGALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYRRSLSIGLLGIVQNGFLLRIWYRTLDKFVTPKTDIKSVLKKIACDEAVFAPQLACSYLATSAYIQSPGDWNAVSDNVQNKVVTTWQNDLKLWPMANLIGFSLVPRPIRPLYASGVQLIWQCYLS 522 + L ++P+ ++ ++ GD +AQ L + + D+ R+ +G G +R WY LDKF K + +V KK+ACD+ +FAP + LAT ++Q D + V + + + N+ KLWP+ LI F LVP + L V + W Y+S Sbjct: 9 KNMLVKYPMGMQALQAGTLMGVGDQIAQNLVEKRKIS-----ELDFVRTAQFYAIGFFMAGPAVRGWYGVLDKFFGSKGSVVAV-KKVACDQFLFAPPFIAALLATIGFLQG-NDVDGVKEKLSKEYKDILINNYKLWPLVQLINFGLVPLNYQVLVNQIVAVFWNTYIS 171 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5315.13483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5315.13483.1 >prot_L-elsbetiae_contig5315.13483.1 ID=prot_L-elsbetiae_contig5315.13483.1|Name=mRNA_L-elsbetiae_contig5315.13483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp MNAVRGALARHPVLFNSVVGYSVFVSGDVMAQRLDVMSEAGASAEWKWDYback to top mRNA from alignment at L-elsbetiae_contig5315:7322..8499- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5315.13483.1 ID=mRNA_L-elsbetiae_contig5315.13483.1|Name=mRNA_L-elsbetiae_contig5315.13483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1178bp|location=Sequence derived from alignment at L-elsbetiae_contig5315:7322..8499- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5315:7322..8499- >mRNA_L-elsbetiae_contig5315.13483.1 ID=mRNA_L-elsbetiae_contig5315.13483.1|Name=mRNA_L-elsbetiae_contig5315.13483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig5315:7322..8499- (Laminarionema elsbetiae ELsaHSoW15)back to top |