mRNA_L-elsbetiae_contig5310.13475.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5310.13475.1 vs. uniprot
Match: D7G5G7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5G7_ECTSI) HSP 1 Score: 129 bits (324), Expect = 1.150e-26 Identity = 328/1042 (31.48%), Postives = 392/1042 (37.62%), Query Frame = 2 Query: 353 GNLLLAATHKAVRDLVSALEQDGDGWQSERDAWAKERAALKASVAYEEGRVGAMKKEAKRLARMVRDSRHENERLTREAXXXXXXXXXXXXXXXXXXXXXLRVRREIETVSDRNRKLLSTLQRELLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSDTEEIVTPRSTGPNGSTESTVAAAAATXXARPRA-----------KPGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPRAEDEGACAAERYQVAANARDNKAAVLGHQPTSHRPSPAXXXXXXXXXXXXXRPCGAEMFTFSGGDRRRVQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHETAGHREPXXXXXXXXXXQSSAAPNQGKRPAFFPLAAPNPPASSSSGRKRSRLSLGGSAADDKGSDAVGGRSVEITEVLEAPRPRSATIAAAAAAAPPFTP---------LVGQAVPAAAGAKGWASVEGSATTAGARRRAASSNSIQSFPGALSAAERIGSSSSSAGG-AHSGDFVSERRRATKQPTVDEQRGPERQ---EQTPGGQQKPSSRHGAGRHQNASGGDTPSMRVSRKGPDSDHHRGGNGRDAAAPCGGRGQLGPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVIYPRLTMAAVNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRGRDEKRRHPAPA------SRGADRGDDGRGLKLRAGAWTEAEADVDAVEERENSXXXXXXXXXXXXXXXXXXXPASASPDNGALS-------PTKSAAGGGEQPAAAGAXXXXXXXXXXXXGPVAPHQNVVNPYAT-GMNGSGAAAAGGGRTRDYRPPEGYKFQEVVRDRGKRAMMKGHDCEHCSAYLAAVGGSPGEREAMLNLCSR 3364 G+LLL+A+ KA+RDL ALE+D DGW SER+ WAKERAAL+AS+ Y+E + +KKE KRLAR+V D++ XXXXXXXXXXXXXXXXXXXXX R++IE +++RNRKL +T++RELL XXXXXXXXXXXX E+VTPRST P E A AA+ A AK XXXXXXXXX + E+E C A ARD++ VL + HR SP G+RRR++ RKRSRLSLGG A ++ GGR+VEITEVL+APRPRS+ A + A+P P + + + A K ++G TAGAR +S+ IQ+FPGAL AAERIGSS G A G RR T Q QR P +Q +QTP G SMR+S+ DSDH R ++ A QLG + XXXXXXX DV+YPRLTMAAVNS XXXXXXXX E R P+P RG RG D G AGA + E V+ E PA NG S PT+ G E VA HQ V NPYAT G+ G A GG R RD +PP YKFQEVVRDR KRAMMKGHDCEHC+AYLAAVGGSPGEREA+LN+CSR Sbjct: 37 GHLLLSASQKAIRDLAYALEKDSDGWHSEREKWAKERAALEASLGYKESHMQVLKKENKRLARVVGDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQIEALAERNRKLKATVERELLDDINPNSAASGNSNNSKRPAAVDRRPQEAASSSVQLEGGIQSIVVPNPRRRPAETIAPSRGSNASTHRXXXXXXXXXXXX---------EVVTPRSTAPGEDHEPPPAVTAASTRNHAEAVGQGVKGWRLATEAAKATHTIRQGSGMVEAAPRAGGKGGHTXXXXXXXXXSGRVESSPLEEE--CKG------ATARDDE--VLPGFDSRHRASPHGPHHGQG---------------LPSGERRRIRRDRS---------------------------------------------------------------------------------------------RKRSRLSLGGGA--EERPYTSGGRAVEITEVLDAPRPRSSA-ARSGRASPDSRPGHSSRNEVKALDKGPMSKAKGKEQPLLDG--PTAGARP-GGNSDGIQTFPGALLAAERIGSSRDGVGSRAGVGGLGEGRRPGTMQVARKHQRRPTKQASHQQTPPRPVLDQQGGKGGXXXXXXXXTVSSMRISQNRSDSDHVR----KNEARLHRDLDQLGRK------------------------NKDTFETSAMREGLEGERVVAGGXXXXXXXDAGTASSTGHDVVYPRLTMAAVNSPRKKKPGQRRXXXXXXXXQDATVVSSAGADCQGYERRKGGPVVGDCGSDGGALGGRLG--------------EVGRLPSPPRLLEANDRGGTRGSDRIG---NAGARKD-ELPVEGSAGNEK--------------------PAPPEHSNGGASHQRRLPKPTEIDTPGEEVGGKERVGSSSKNRAAAAATAVARHQVVANPYATAGVTSRGGAGRGGERARDDKPPN-YKFQEVVRDRSKRAMMKGHDCEHCAAYLAAVGGSPGEREAILNMCSR 878 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5310.13475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5310.13475.1 >prot_L-elsbetiae_contig5310.13475.1 ID=prot_L-elsbetiae_contig5310.13475.1|Name=mRNA_L-elsbetiae_contig5310.13475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1020bp MSGLRDHQNGEGDGDGNLLLAATHKAVRDLVSALEQDGDGWQSERDAWAKback to top mRNA from alignment at L-elsbetiae_contig5310:2208..11904+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5310.13475.1 ID=mRNA_L-elsbetiae_contig5310.13475.1|Name=mRNA_L-elsbetiae_contig5310.13475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9697bp|location=Sequence derived from alignment at L-elsbetiae_contig5310:2208..11904+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5310:2208..11904+ >mRNA_L-elsbetiae_contig5310.13475.1 ID=mRNA_L-elsbetiae_contig5310.13475.1|Name=mRNA_L-elsbetiae_contig5310.13475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6120bp|location=Sequence derived from alignment at L-elsbetiae_contig5310:2208..11904+ (Laminarionema elsbetiae ELsaHSoW15)back to top |