mRNA_L-elsbetiae_contig531.13474.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: D8LDF4_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI) HSP 1 Score: 179 bits (453), Expect = 1.940e-48 Identity = 84/103 (81.55%), Postives = 96/103 (93.20%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASK 313 GNMTGFVGECFHVFNKHASS+AVKPYF+T++MR R VLLLGDSLGDLNMAKGL AE++LTVGFLNDK+EERT+AY+KAYDV++LGD GFDFVL LL +VASK Sbjct: 164 GNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKIEERTDAYLKAYDVIILGDGGFDFVLELLEEVASK 266
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: A0A6H5JI70_9PHAE (5'-nucleotidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.950e-45 Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASK 313 GNMTGFVGECFHVFNKHAS++AVKPYF+T++MR R VLLLGDSLGDLNMAKGL AE+ LTVGFLNDKVEER +AY+KAYDVV+LGD FDFVL LL VASK Sbjct: 198 GNMTGFVGECFHVFNKHASASAVKPYFETDEMRCRSNVLLLGDSLGDLNMAKGLRAEETLTVGFLNDKVEERADAYLKAYDVVILGDGSFDFVLELLEQVASK 300
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: A0A835YMP4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.280e-25 Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDAEQVLTVGFLNDKVEERTEAYVKAYDVVVLG-DCGFDFVLNLLRDV 304 G GF G+ FHVFNK A + +PYF +E+++ R VLLLGDSLGDL MA GL+A++VL+VGFLND+ EER +Y+ YDVV++G D G + L+L+R++ Sbjct: 170 GGFIGFTGQLFHVFNKRAGAVLDEPYFMSEEVKLRRNVLLLGDSLGDLQMASGLEADEVLSVGFLNDQAEERIGSYLAGYDVVIIGPDAGLQYALDLVREL 270
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: A0A0D2U9Z3_CAPO3 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9Z3_CAPO3) HSP 1 Score: 99.0 bits (245), Expect = 1.240e-18 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASKDAN 322 G +GF G+ HV+NK VK + + +R V+LLGDSLGDL M++G+D + +LT+GFLNDKV ER E+Y +A+DVV+LGD D V NL+ + S + + Sbjct: 285 GYTSGFAGKTIHVYNKQ--DVVVKDSPVHKSIADRHNVILLGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMIISGECD 388
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: UPI0001FE3700 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE3700) HSP 1 Score: 99.0 bits (245), Expect = 1.780e-18 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASKDAN 322 G +GF G+ HV+NK VK + + +R V+LLGDSLGDL M++G+D + +LT+GFLNDKV ER E+Y +A+DVV+LGD D V NL+ + S + + Sbjct: 322 GYTSGFAGKTIHVYNKQ--DVVVKDSPVHKSIADRHNVILLGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMIISGECD 425
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: W7TPE8_9STRA (5'-nucleotidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.070e-18 Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAA-VKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASKD 316 G + GF FHVFNK A S YF D R +L+GDSLGDL+M+ GL+ E+++ VG LND+VEER + Y + +DVV+LGD +++ LLR++ S + Sbjct: 265 GVLVGFTEPVFHVFNKRAESVLNTSAYFHQIDYEKRKHAILVGDSLGDLHMSDGLELEEIIKVGLLNDRVEERLDEYSQKFDVVLLGDGDLTYIIGLLRELISDE 369
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: A0A7S3LZW9_9STRA (5'-nucleotidase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 3.020e-17 Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDA--EQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASKDAN 322 G +TGF HVFNK +++ +F TED+++R +LLLGDSLGD+ M++G++ ++++ VGFLND+VE R + Y++ YDVV+L D GFD LL+++ ++ Sbjct: 235 GKVTGFEQPLLHVFNKKSTAYLHTNFFNTEDIKDRTNLLLLGDSLGDITMSEGMEINDDRIIKVGFLNDRVE-RMDQYLEKYDVVILDDPGFDIPYYLLQEICEPKSD 341
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: UPI0003F0B98C (7-methylguanosine phosphate-specific 5'-nucleotidase n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0B98C) HSP 1 Score: 92.8 bits (229), Expect = 3.500e-17 Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGL-DAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDV 304 G + GF G+ H +NK++S YFQ +N+ VLLLGDS+GDL MA G+ D E +L +GFLNDKVEER E Y+ YD+V+ D D V LL+D+ Sbjct: 182 GYLRGFKGQLIHTYNKNSSVCENSGYFQ--QFQNKTNVLLLGDSIGDLTMADGVPDVENILKIGFLNDKVEERRERYMDLYDIVLEKDETLDVVNGLLQDI 280
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: A0A4Y2BSR1_ARAVE (5'-nucleotidase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BSR1_ARAVE) HSP 1 Score: 87.4 bits (215), Expect = 3.710e-17 Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 11 MTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGL-DAEQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDV 304 +TGF G+ H FNK SS K YF +++R+ V+LLGDSLGDL+MA G D +L +GFLN KVEE Y++A+D+V+ D D V+ LL+ + Sbjct: 9 LTGFKGDLIHTFNKDLSSIENKDYFN--HLKSRNNVILLGDSLGDLDMAAGAEDVNALLKIGFLNFKVEENLPKYLEAFDIVLCDDQTMDVVIGLLQHI 105
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Match: A0A8J6K081_ELECQ (5'-nucleotidase n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6K081_ELECQ) HSP 1 Score: 89.4 bits (220), Expect = 4.480e-17 Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 5 GNMTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKGLDA-EQVLTVGFLNDKVEERTEAYVKAYDVVVLGDCGFDFVLNLLRDVASKD 316 G +TGF GE H +NK+ S YFQ + +R +LLLGD+LGDL MA+G+ E +L +GFLNDKVEE T+ ++++YD+V++ D D V +L + +K+ Sbjct: 69 GVLTGFKGELIHTYNKNNSVLRDTEYFQ--QISHRSNILLLGDTLGDLTMAEGVTTMENILRIGFLNDKVEELTDQFLQSYDIVLVTDETLDVVNGILNFITAKN 171 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig531.13474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig531.13474.1 >prot_L-elsbetiae_contig531.13474.1 ID=prot_L-elsbetiae_contig531.13474.1|Name=mRNA_L-elsbetiae_contig531.13474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp MTGFVGECFHVFNKHASSAAVKPYFQTEDMRNRDRVLLLGDSLGDLNMAKback to top mRNA from alignment at L-elsbetiae_contig531:28043..33778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig531.13474.1 ID=mRNA_L-elsbetiae_contig531.13474.1|Name=mRNA_L-elsbetiae_contig531.13474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5736bp|location=Sequence derived from alignment at L-elsbetiae_contig531:28043..33778+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig531:28043..33778+ >mRNA_L-elsbetiae_contig531.13474.1 ID=mRNA_L-elsbetiae_contig531.13474.1|Name=mRNA_L-elsbetiae_contig531.13474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig531:28043..33778+ (Laminarionema elsbetiae ELsaHSoW15)back to top |