mRNA_L-elsbetiae_contig531.13473.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig531.13473.1
Unique NamemRNA_L-elsbetiae_contig531.13473.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE)

HSP 1 Score: 446 bits (1148), Expect = 5.920e-153
Identity = 222/337 (65.88%), Postives = 272/337 (80.71%), Query Frame = 3
Query:   39 VQGHPSVEGAMRKTADRVDSQSTRWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRSTSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLMNPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMYRSMNVYQE 1049
             QGHPSVEG  RKTA  V  QS R YLN LV+AT     NQV+NVAFVKTHKTASTT+A+IMYRYA RH LKLS+FG S+  +L++AA +TK+N Q VD+MHYHI+ +GQY GTW+EAV +YR IMR+PD INF+TVLREPRSHLLSYYYY++QP +Q SIEEFL++ H   + +H +L NPLSAEFGVRT E+M+  I   LPDFKL+++  RLDEGLL + RMLHWH+ID+TYCDLN+TK G RRWDGK  V  P FDSLPK+VQ KID LT LDRVLY+AGK EFEKR+APYA+S+QED  QF+ELQ  I +YL+GNSSS+A+ MY +M++Y++
Sbjct:    8 AQGHPSVEGTPRKTAGDVGPQSRRGYLNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFGGSSVTDLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQPLHQQSIEEFLLSGHR-NNIEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLM--RLDEGLLTLGRMLHWHMIDLTYCDLNETKEGSRRWDGKTVVTWPQFDSLPKQVQNKIDDLTRLDRVLYEAGKDEFEKRLAPYASSVQEDIPQFQELQGVIKDYLNGNSSSLAYQMYLNMHIYKK 341          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 1.140e-125
Identity = 191/326 (58.59%), Postives = 243/326 (74.54%), Query Frame = 3
Query:   87 RVDSQSTRWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRS--TSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLMNPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMYRSMN-VYQEPP 1055
            R  S     +LN LV+A+A    NQV+NV FVKTHKT STTLAA+ YRYAVRH LKL+HFG+   T  NLK AATQT+++ + VD+MHYHI+  G+Y GTW +A  Y+R IMRHPD IN++TVLREPRSHLLS YY+YI P  +LSIE++LM+P    D +   L NPLSAEFGV+T ++M   I   LPDFKL+MLTER+DE L+++R +L WH+IDVTY  LN T+AG RR+DGKP +DRP F  L +EVQ +ID+LT LD+ LYDAGKKEFEKR++  + S Q +   F+ELQ+ +  YL+GNSS +A  MYRSM+ VY +PP
Sbjct:   29 RTSSGELAGHLNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELSIEDYLMDPAHAGDENRHRLRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARRYDGKPLIDRPDFCHLSEEVQARIDELTILDQALYDAGKKEFEKRLSSTSTSFQAELAGFQELQDNVCTYLEGNSSGLAREMYRSMDAVYTDPP 354          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 4.710e-102
Identity = 167/331 (50.45%), Postives = 233/331 (70.39%), Query Frame = 3
Query:  102 STRWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFG-RSTSVNLKTAATQT--KQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLMNPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKR---IAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMYRSMNVY-QEPPLQKYPF 1073
            + R YLN LV  +AA    Q+SN+AF+KTHKTASTT A ++YRYA RH++KL+HF   ++++ L+ A  QT  +Q +   DIMHYH++A GQ+EG+W +A   YR I+R+   +NF+TV+REPRSHLLSYYYY++QP+ Q +I EFL     P+D  H  L NPLSAEFGV+  +D+  +++K LP+ K+++LTE  DEGL+V+RR+L W ++D+TY  + KT AG RR+DGKP V+ P F+ LP +VQQ ID+ T+LDRVLY+A K E+EKR   I P    ++ED  +F ELQ T+  YL  N +S A+ MY++ N+Y QE     Y F
Sbjct:   79 TNRSYLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGEFLTQAKHPRDPIHRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTYVSVYKTTAGARRYDGKPLVNAPRFEDLPVQVQQIIDQHTELDRVLYNAAKLEYEKRRDLIPPPL--LEEDLVEFHELQRTVGAYLVDNPTSKANAMYKTANIYAQEDASPFYEF 407          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: A0A6G6CDJ0_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDJ0_SACJA)

HSP 1 Score: 305 bits (781), Expect = 1.980e-96
Identity = 162/347 (46.69%), Postives = 234/347 (67.44%), Query Frame = 3
Query:   51 PSVEGAM--RKTADRVDSQST----RWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRSTSVNLKTAATQTKQNR-QPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLMNPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMYRSMNVY-QEPPLQKY 1067
            P+V+  M  R   + VD QS     R YLNGLV+A+ A   +Q  N+AF  T++T ST++A I+YRYAVRH+LKL+  G+ ++V+ K  ATQ +Q + + VDIMHYHI+ KG  +G W  A   YRGIMR PD +N +T++REPR H +SYYYY+++P  +LS+E+FLM  H   DF   LL NPL++E GV T  +ME L       F++I+LT+R DEGL+V+RR+L W +ID+TY  +++TKAGD        VDRP F  LP++V+ KID LT+LD+++Y A +  ++KR+ P ++ I  D  +F++LQ  +S YLD N SS A+ MYR+ +VY   PP+ ++
Sbjct:   84 PTVKWIMEGRSKQNGVDEQSQAIPDRDYLNGLVEASVATTDHQEGNIAFANTYQTGSTSMAGILYRYAVRHNLKLARVGQESAVDPKWFATQVQQGKSERVDIMHYHISNKGHLKGLWPGARENYRGIMREPDNVNLLTMMREPREHFISYYYYFVEPATKLSLEDFLMKSHGGDDF--ALLKNPLASEVGVTTFHNMEQLFVNDFSSFRMILLTDRFDEGLMVLRRLLGWSMIDMTYMAMDETKAGDIA-----VVDRPSFHDLPEKVRNKIDSLTELDQMVYSAAQVLYDKRLRPMSDVIGADVEEFQKLQKVVSGYLDANQSSKANAMYRAEDVYIGAPPMNQF 423          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 1.010e-92
Identity = 156/321 (48.60%), Postives = 210/321 (65.42%), Query Frame = 3
Query:   78 TADRVDSQST-RWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRS--TSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFL-MNPHDPQ-DFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMY 1025
            TA+ ++  S  R YLNGLV+ TA     Q  N+AF KTHKTASTT+A I+ RYA RHD+KL+ FG +  +++ L  A  Q +++ + VD+MHYH TA G ++G W EA   Y  IMR  +RIN+ITV+R  RSH LSYYYYY+QP  QLS++ F   N  DPQ  +    L NPL AEFG+   E +   I+  LPDF+L++LTE  DEGL++MRR+L W +ID+TY  + +TKAG  RWDGK   + PH++ LP  VQ ++D  T LD++LYDA    + K  A  A  I++D  +F+ELQ T++ YL  NSSS A   Y
Sbjct:    6 TAEEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNRQDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGARWDGKELKNVPHWEDLPTWVQDRVDANTALDKMLYDAAVSHYNKMKAVAAMEIEDDLKEFDELQKTVNGYLALNSSSEAIRWY 326          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: D8LRU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU7_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 2.870e-89
Identity = 172/358 (48.04%), Postives = 203/358 (56.70%), Query Frame = 3
Query:    3 SLTEKGKEADAGVQG-------HPSVEGAMRKTADRVDSQSTRWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRSTSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLMNPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMYRSMNVYQEPP 1055
            SL  +G EA    QG       HPS+EG M+           R YLN LV+AT     +QV+NVAFVKTHKTASTTLAAIMYRYA RH+LKLSHFG  ++V+LK+AA +                                                                    +SIEEFLM+       DH LL NPLSAEFGVRT E ++ LI  TLPDFKLI+LTERL+EGLLV+ RMLHWH+ID+TYCDLN+TKAG RRWDGKPFV RPHFDSLP                          KR+APYA+S++ED  +F+ELQ+ IS YL GNSSS A+ MYRSMNVY+EPP
Sbjct:   72 SLAAEGDEATETTQGLGGVAQDHPSLEGRMKPR---------RSYLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGGSAVSLKSAAAK--------------------------------------------------------------------ISIEEFLMHTAGSSK-DHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPS-------------------------KRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYRSMNVYKEPP 326          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 5.980e-89
Identity = 155/321 (48.29%), Postives = 209/321 (65.11%), Query Frame = 3
Query:   78 TADRVDSQST-RWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRS--TSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFL-MNPHDPQ-DFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMY 1025
            TA+ ++  S  R YLNGLV+ TAA    Q  N+AF KTHKTASTT+A I+ RYA RHD+KL+ FG +  +++ L  A  Q +++ + VD+MHYH T  G ++G W EA   Y  IMR  +RIN+ITV+R  RSH LSYYYYY+QP  QLS++ F   N  DPQ  +    L NPL AEFG+   E +   I+  LPDF+L++LTE  DEGL++MRR+L W +ID+TY  + +TKAG  RWDGK   + P ++ LP  VQ ++D  T LD++LYDA  + + +  A  A  I++D  QFEELQ  ++ YL  NSSS A   Y
Sbjct:  195 TAEEMEELSRERAYLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNREDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTRWDGKELKNVPRWEDLPTWVQDRVDANTALDKMLYDAAVRHYNQMKAVAAIEIEDDLKQFEELQKVVNGYLALNSSSEAIRWY 515          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 2.710e-81
Identity = 143/337 (42.43%), Postives = 208/337 (61.72%), Query Frame = 3
Query:   54 SVEGAMRKTADRVDSQSTRWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHFGRS-TSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLM-NPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMY-RSMNVYQEPP 1055
            S E  +  +++ +  ++ R YLNGLV  +A+ +  Q+SN+AF+KTHKTASTTLA+I+YRY +RHD  ++ F +  T V+L  A+ Q  +  + VDIMHYH    G Y GTWD+A   Y  IM +   +N++TVLREP +H LSYYYY++ P N++ I+E+L+ NPH        LL NPL+AEFG+  +  M   I+K +P FK+++LTER DEGL +++RML W  ID+TYC + +TK G+ RWDGKP  + P    L  E+   I   T LD  LY AG   + K    +   + E    F+ +Q  +  YL+ N+SS A   Y   +++Y + P
Sbjct:  126 SQEILLEGSSEDLPVEAMRDYLNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNPINKMPIDEYLLKNPHKK------LLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMRWDGKPLENVPKISDLAPEILSHIKARTQLDSRLYQAGTLLYRKYKLEFGPGVDEHFQAFQGVQKVMHRYLEMNTSSDALKWYVGDVDIYDDAP 456          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 2.220e-77
Identity = 143/304 (47.04%), Postives = 191/304 (62.83%), Query Frame = 3
Query:  126 LVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHF-GRSTS-VNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFLMNP--HDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMY 1025
            +V  +A     Q+ NVAFVKTHKTASTTLA I  RYA RHD KL+ F GR  S V L  A  Q ++N Q VD+MHYH+  +G +EGTW++    Y+ IM+  + IN+ITV+R PR H LSYYYYY+QP N+LSIE++L     H  Q      ++NP+  EFGV   + ++  I+K LP F L++LTE  D GL+ +RR++ W +ID+TY  + +TK G  RWD KP VD P F SLP+ VQ  ID  T LDR L++A    +  R A      ++D  +F+ELQ  ++ YL  NSSS A   Y
Sbjct:    1 MVTESAGKTGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHVH-EGVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYLERTKRHPAQH-----MMNPMCVEFGVHDKDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFASLPQWVQDTIDATTALDRKLHEAAVLAY--RQAAEVGDAEQDLVEFKELQRIVTAYLQANSSSEARRWY 296          
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 6.420e-76
Identity = 143/340 (42.06%), Postives = 199/340 (58.53%), Query Frame = 3
Query:  108 RWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAAIMYRYAVRHDLKLSHF-GRSTSVNLKTAATQTKQNRQPVDIMHYHITAKGQYEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLSIEEFL---MNPHDPQDFD------------HG--LLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIMLTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFDSLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQNTISNYLDGNSSSMAHPMYRS-MNVYQEP-PLQKY 1067
            R YLN LV  + A   NQ  N+AFVKTHKTASTT A ++YRY  RHDL ++HF G  +S+ L  A    + + +PVD+MHYH    G YEG W EA   Y+ IMR P ++N +TV+REP +H +SYYYY++QP   LSI E+      P DP+               HG  LL NPL AEFG+RT  ++E  I+  L  F +++LTE  +EGL V  RM +W  ID+T+C + +TKAG  R+DGK   + P    LP EV  +I + T LD+ LY A  K + ++ A Y +S++ D      +Q+ +  YL+ N+ S AH  Y   +  +  P P+Q +
Sbjct:    7 REYLNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHGHQSSIELPEAI---EDSGKPVDLMHYHHAWDGFYEGGWAEAKAAYKKIMRDPTKVNLVTVMREPVAHYMSYYYYFLQPETGLSIAEYFELSAKPGDPRYRGVFQRRRAGKAGWHGFKLLHNPLCAEFGIRTATELESFIRDDLQGFAMVLLTEHFEEGLAVFMRMFNWRPIDMTFCRVIETKAGVSRYDGKKLTNVPKTRDLPPEVLAQIKQQTQLDQALYKAAVKVYLQKRAEYQDSLEVDVRSIRTVQSAVHGYLEFNAKSPAHKWYEGDVKCFANPSPVQPF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig531.13473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIK1_9PHAE5.920e-15365.88Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8E6_9PHAE1.140e-12558.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRU8_ECTSI4.710e-10250.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G6CDJ0_SACJA1.980e-9646.69Sulfotransferase n=1 Tax=Saccharina japonica TaxID... [more]
D7FI84_ECTSI1.010e-9248.60Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D8LRU7_ECTSI2.870e-8948.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL02_9PHAE5.980e-8948.29ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7FX25_ECTSI2.710e-8142.43Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4H5_ECTSI2.220e-7747.04Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D8LK91_ECTSI6.420e-7642.06Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig531contigL-elsbetiae_contig531:15617..21747 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score270.8
Seed ortholog evalue8.7e-70
Seed eggNOG ortholog2880.D7FX25
Preferred nameGAL3ST3
KEGG rclassRC00007,RC00231
KEGG koko:K01019,ko:K09676
KEGG ReactionR04017,R05105,R10805
KEGG Pathwayko00565,ko00600,ko01100,map00565,map00600,map01100
KEGG ModuleM00067
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005975,GO:0005976,GO:0005996,GO:0006022,GO:0006029,GO:0006790,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009311,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016782,GO:0017076,GO:0019538,GO:0030166,GO:0030246,GO:0030309,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044425,GO:0050656,GO:0050694,GO:0050698,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681
EggNOG free text desc.galactosylceramide sulfotransferase activity
EggNOG OGs2CM97@1,2QPNT@2759
EC2.8.2.11
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons11
Model size1340
Cds size1008
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816550.458671-UTR-L-elsbetiae_contig531:15616..158801622816550.458671-UTR-L-elsbetiae_contig531:15616..15880Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig531 15617..15880 -
1691683640.7892113-UTR-L-elsbetiae_contig531:15616..158801691683640.7892113-UTR-L-elsbetiae_contig531:15616..15880Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig531 15617..15880 -
1622816550.5985901-UTR-L-elsbetiae_contig531:21415..214381622816550.5985901-UTR-L-elsbetiae_contig531:21415..21438Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig531 21416..21438 -
1691683640.9205282-UTR-L-elsbetiae_contig531:21415..214381691683640.9205282-UTR-L-elsbetiae_contig531:21415..21438Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig531 21416..21438 -
1622816550.611313-UTR-L-elsbetiae_contig531:21702..217471622816550.611313-UTR-L-elsbetiae_contig531:21702..21747Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig531 21703..21747 -
1691683640.92943-UTR-L-elsbetiae_contig531:21702..217471691683640.92943-UTR-L-elsbetiae_contig531:21702..21747Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig531 21703..21747 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816550.4708352-CDS-L-elsbetiae_contig531:15880..159351622816550.4708352-CDS-L-elsbetiae_contig531:15880..15935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 15881..15935 -
1691683640.8107998-CDS-L-elsbetiae_contig531:15880..159351691683640.8107998-CDS-L-elsbetiae_contig531:15880..15935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 15881..15935 -
1622816550.4837286-CDS-L-elsbetiae_contig531:16300..164131622816550.4837286-CDS-L-elsbetiae_contig531:16300..16413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 16301..16413 -
1691683640.8197372-CDS-L-elsbetiae_contig531:16300..164131691683640.8197372-CDS-L-elsbetiae_contig531:16300..16413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 16301..16413 -
1622816550.4980404-CDS-L-elsbetiae_contig531:16721..167961622816550.4980404-CDS-L-elsbetiae_contig531:16721..16796Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 16722..16796 -
1691683640.8288302-CDS-L-elsbetiae_contig531:16721..167961691683640.8288302-CDS-L-elsbetiae_contig531:16721..16796Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 16722..16796 -
1622816550.5118554-CDS-L-elsbetiae_contig531:17346..175171622816550.5118554-CDS-L-elsbetiae_contig531:17346..17517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 17347..17517 -
1691683640.8395274-CDS-L-elsbetiae_contig531:17346..175171691683640.8395274-CDS-L-elsbetiae_contig531:17346..17517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 17347..17517 -
1622816550.5226483-CDS-L-elsbetiae_contig531:18411..185611622816550.5226483-CDS-L-elsbetiae_contig531:18411..18561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 18412..18561 -
1691683640.8498769-CDS-L-elsbetiae_contig531:18411..185611691683640.8498769-CDS-L-elsbetiae_contig531:18411..18561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 18412..18561 -
1622816550.5358675-CDS-L-elsbetiae_contig531:19211..192451622816550.5358675-CDS-L-elsbetiae_contig531:19211..19245Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 19212..19245 -
1691683640.8581266-CDS-L-elsbetiae_contig531:19211..192451691683640.8581266-CDS-L-elsbetiae_contig531:19211..19245Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 19212..19245 -
1622816550.548074-CDS-L-elsbetiae_contig531:19564..197341622816550.548074-CDS-L-elsbetiae_contig531:19564..19734Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 19565..19734 -
1691683640.8741689-CDS-L-elsbetiae_contig531:19564..197341691683640.8741689-CDS-L-elsbetiae_contig531:19564..19734Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 19565..19734 -
1622816550.563202-CDS-L-elsbetiae_contig531:20279..203331622816550.563202-CDS-L-elsbetiae_contig531:20279..20333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 20280..20333 -
1691683640.8894417-CDS-L-elsbetiae_contig531:20279..203331691683640.8894417-CDS-L-elsbetiae_contig531:20279..20333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 20280..20333 -
1622816550.5738852-CDS-L-elsbetiae_contig531:20893..209861622816550.5738852-CDS-L-elsbetiae_contig531:20893..20986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 20894..20986 -
1691683640.8993225-CDS-L-elsbetiae_contig531:20893..209861691683640.8993225-CDS-L-elsbetiae_contig531:20893..20986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 20894..20986 -
1622816550.5845737-CDS-L-elsbetiae_contig531:21322..214151622816550.5845737-CDS-L-elsbetiae_contig531:21322..21415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 21323..21415 -
1691683640.909664-CDS-L-elsbetiae_contig531:21322..214151691683640.909664-CDS-L-elsbetiae_contig531:21322..21415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 21323..21415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig531.13473.1prot_L-elsbetiae_contig531.13473.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig531 15881..21415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig531.13473.1

>prot_L-elsbetiae_contig531.13473.1 ID=prot_L-elsbetiae_contig531.13473.1|Name=mRNA_L-elsbetiae_contig531.13473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=336bp
MRKTADRVDSQSTRWYLNGLVQATAAGKANQVSNVAFVKTHKTASTTLAA
IMYRYAVRHDLKLSHFGRSTSVNLKTAATQTKQNRQPVDIMHYHITAKGQ
YEGTWDEAVGYYRGIMRHPDRINFITVLREPRSHLLSYYYYYIQPRNQLS
IEEFLMNPHDPQDFDHGLLLNPLSAEFGVRTVEDMEDLIQKTLPDFKLIM
LTERLDEGLLVMRRMLHWHLIDVTYCDLNKTKAGDRRWDGKPFVDRPHFD
SLPKEVQQKIDKLTDLDRVLYDAGKKEFEKRIAPYANSIQEDSTQFEELQ
NTISNYLDGNSSSMAHPMYRSMNVYQEPPLQKYPF*
back to top

mRNA from alignment at L-elsbetiae_contig531:15617..21747-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig531.13473.1 ID=mRNA_L-elsbetiae_contig531.13473.1|Name=mRNA_L-elsbetiae_contig531.13473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6131bp|location=Sequence derived from alignment at L-elsbetiae_contig531:15617..21747- (Laminarionema elsbetiae ELsaHSoW15)
GATCGCTGACCGAGAAGGGCAAAGAGGCCGATGCGGGCGTTCAAGGTAAC CGAAACGACGATTTGCTGGCAGCAGAGTGGCTGCTCACCTCTTACTTCTT TTTTCGCGAGTCAGACCATGCCCACTCTCTTAAAAAAAGTACGATTATTT GTATTCGGCACGGCGGAGAACAAACTATTTATGTGGTCTATGTACATCTG TACTATGAGAAACTGCGTTTTTGATTCCAACTCAGCTTATTGATACCCAC AAGAACTGGTCACCAGATGTTTTACACACGCACCTACGTAATTTACCCGC ACTACAAAGGTCATCCATCGGTAGAGGGGGCGATGCGCAAAACAGCAGAC CGGGTGGATTCACAATCGACGCGGTGGTATTTAAACGGACTGGTGCAGGC GACGGCGGCGGGCAAGGCAAACCAAGTGAGAGTTCGTTCCCGTTTCAAGC AATAAATGAAGGGTCGTTGGTCGGAATCTTGGGGTTCGCATAATGTACGA CAACCGGCCTCTCGCCGGCCAACGCGTTTTTATATAGCCAGCAATCCGTA GCTGGGCGGGTGCTGCATGTACCTGCTTGTATGCGCTCTCATCTTTGTGC GGCGTCCTGGTGAATGCTAAGAGTGCGTGGGTGGGTTATTTCCGAACATA TTTGGATTTATTATTTGAGAAGAGTGTCCTACTTTATGAGATGGTCCGCG CTCTCAACCCAGGCTTTTCTTCACGGTTTACGCTGCTTCCCTGTACCCTA TTTTTTCATAGGTGTCAAATGTCGCCTTTGTTAAAACGCACAAAACGGCA TCGACAACGCTGGCGGCCATCATGTACCGCTATGCAGTGCGACACGATCT TAAGGTACTGCAACAATGCGACTGGTTTTGTTGCACGAGAACCATAGAAT ATCCACTGATGTTGAACTTGGCATCTCTCTTGATTGAGGAGCCTTCTGAT CACGACTTTGTCGAGGCTTTACATAAACTGATACTGCGAACCATTTCGTT TGCAAGCTCTGACAGACTTGGACGAACGGGACCCCAATCCCTTCCTTGTG GTGTGTTTTCAATGGTACAATACTGCACGTCGAAGTAGAAGAGACGCAAA CACCAATCCTGCTCTATTTACCGTGCTGGCTCGATGCGCTTGGTGAACAC GGCAGTAGTTTTTTCGACGTTTTCCGAAAGTATCGGTCGATGCCAAGCGA TTGGGCTCGTTGGACAGAACCATTTAAAAACCGAGACCACGTTTGATGGT TTTACGACGATTCTTGGTGCCGGCTCCAGTCAAAAATGATTTTTTCTCGG CGTTTTGGTTCCTCGCCACACCTCTGTTTTTGTTCGTACCTCTCGTCCCG TGTTCTGCTGCACTCCGACGTATGACCCACTCGGACAACACTCTCGGGTT CGTCCGTTTTTCAGCTGTCGCATTTTGGACGTTCGACGTCCGTCAACCTC AAGACGGCTGCGACTCAGGCAAGAGGGCGTTGCACTTTCAACAACGTTTC TACCTCTGCTGTCTTGTTTGTTCACCACGTCTCTTTGAACGCGCGAACAA AAGCTGGGCCCTGTCTGCATGCACAATAGTCGTCGGTGTTGATGGTAGGT TGCGCTAGGCTGTCCCAACCACAAGCGTTCTCCAGCCAGGGTAAGCGTGC GCGCATCTAACGCGCCGGTGCAGTGCTTATGCACCGGCCGTACCTGTACA TACATGAAACATATCCCAGATCGCTTGATCGTAGTGAAGCTGGTGAAGAA GGGATAACGTCCGACACGTTTTCGGGTGGACCGGGGCCTGAAACAAACCT CCTTATACCAGGCCGTGCACGACAAACAAAGTCAGGCGCACCGTTGCTTC TTAGAAGCAGTTCGAGTGAGAGTGGGCCGATCTTCCCGTCTCCAGAAGCG GTCAAGGCCCAAAAGACTATAAGTACTCGACTCGCAACAATGACACTTTC ACCCTGTGCCTTGGGGGCCCTGTCGCACTTTTTTTCAATCTTGGCCAATC TTGGATTTATCAGACGAAGCAAAACAGGCAGCCTGTGGACATCATGCACT ACCACATTACTGCAAAGGGCCAGTACGAAGGGACTTGGGACGAAGCGGTC GGGTATTACAGAGGCATTATGCGCCATCCTGATCGGATCAACTTCATTAC GGTTTTGCGGGAGCCTAGGTCACATCTTCTCAGGTATGGATTCCCTCCTG CAAGCACCCGTACGTATCTTCTCAAAACGGCAAAATTCCTGGCTACCTAA GCCTCTGGCTACCTAAACTTCGTGAGCTTTGCTTTCATCGGTCCTTCCCC CCGATGGCGGAGCTCAACGACCGACGTTGCTAGACGGGACTTGACTTTTC ATCTATTTTATACCGGTGGTTCCTTCTTCACTACCCCCTTTTTTTCCTGC GCTCATCTCCCCGTTTGGCTGGTCGAATGATATGACATATATTTCCCGGC GGGTGGATGAATGTCTGGATGACTGCTTGACCTGGACGAATTGGATCCAC AGCTACTACTACTACTACATCCAACCCCGAAATCAGGTATGACGAGCATG CTTTCGGCAGTATGCGGATGCGCAAATGTTCCTGTAAGCTGGTCGCCGCT TGGGCAACGTCACCAATAAGTTGATACACTTGTTCGCTCTCCTGTGGCCT TAAGCATCATGGTCCAGGCGAAGTCCACCGCTGACACACTTTTCGCCGGT TCACCTTATGCATCTATGCATAATAGGGTGTTTATTTGGCAGGGTTGTCA AAACGAAGAAAATCGGCCAGCTATTGCATCAACCCGCGCAAGATGAGATA TTTTATCACGAAATCTGCGAGCGACTGACTACAAACCATTTATCTTTATT TTCCTAGGATCGGGTTGCGAGTTTGCAGTACATTGATCTGCCCTCACAAG CAGCCATGGCTGGCATCTACGCAATTGTTAGCTGTGATCGTAGAGGAACC CTTGTTGTACCGGTTTGTTCCTTTTCTCATGCTCACGAATTAAGAGACCT AGAATATCCAATCACCGTACGACCTCTCCAACTTGGTGCCGTCGCGTGAC ATCGGGGGGTGTATGCCGACTGTTTCTTTCACGTGAGGCGTGTTCTGCTT GCTGTGTCCAAGGAACCATCTCAACGTGTCTGCGCCTCATACATTACCTG GACCACCCTTGCTACCACCTTTCTTGTTTGTTACAGCTTTCCATCGAGGA ATTCTTGATGAACCCGCACGATCCTCAAGACTTCGACCACGGGCTCCTGC TGAACCCTCTTTCGGCAGAGTTTGGAGTGAGAACGGTAGAAGACATGGAG GACCTCATCCAGAAAACGCTCCCAGATTTCAAGTTGGTGAGGATGTTAAC ATCTGGGTGTGTGTTTTGGAGCTAACTTGTGCTGGCTACAAGTAGAACCA CGCGATAAACTTTTGGGCAAAATTGCCACCCTTTGGATACAGCTTGTAGG CCACCCTGTGGATGATCTGTACCCCCCTTCCCCTGGCTAGCTAGACAAGC ACCTAGTCTTCGATCTGCTGCTGTGTGTGCTGGTGTGGTTGTTACTGGTA CCTCTTGCACTCGTTCGAAGCTACTAGCTTTCCGTTCCGGGCAAAGTTAA TCAAAACATTCCAAGGTTCAGCCTTCAGCAACAAACGCACTTGTTGTGTC CGGGAAAACCAAGCTGTTCCCGAGGCTGAGGCTGGCTGCTAGTTGCATAG CGGACAAGCCCTCAGCTGGTATGGCAGCGGCAAACACGAACTGCTCTACC TAAAGCCGCCCCCGGCTCGACATTGCGAAGCGAGTGCCGTTCCCACCGCC GCATGATGTGAAAGGAATGCAAGACCTTTCATTTTTCTTGCAGCCCCTGT GGACGGTCTCCCCTCGCACTTTATGCGTGCGCTTTCTCTTGTCTTTCTGA AACAATCTTCACCCCATCACCTCCATCGTATATCTGTCAAATCTGTCGCT CAATGAACCATTCGTGCCCATCCTTTTTCTTGCATCTCGGCCGGAAAAAG GCCGAAGGAAATAGCTCTGAATTCAAAATAAGACATCGCCATCTTGCCGT AATCTTGTGCCTAAAAAGCACCAACCGCTTTAGTCTAATTTGATGAATTT TGAACGCGCGGTTCGTCGTTTTTTTCATCTACTTGATCTACCGCATGTAG TAACTGTATAGAATTGGCCTCTGAACTTCTCGCGTTCAATCCAGCATGCC CCAACTCTGCCCTTCATCGTGCGCTGTTAGATAATGCTGACAGAACGGCT GGACGAAGGGCTGCTAGTTATGCGACGGATGCTGCACTGGCATTTGATCG ACGTTACGTATTGCGATCTGAACAAGACAAAGGCGGGCGACAGACGATGG GACGGCAAACCCTTTGTCGACAGGCCGCACTTCGACAGCCTCCCGAAAGA GGTAAGGGAGAAAACCTAACTCGTCTCCTCGTATCTGTGTGTAGACATTA TTGGACATCCAGATAAAGCATAAAAAACAAACCGCTCAACTTGCTATCGT GGCATGTTTAAGTTAGCCCAGCGTGTTCTTTCATGGGACGAAAAACTGTT GCACTGCTCTTGTTCTACACCGTTCTCATCGCGCTATGGAGAATCAGAAG ATGCATATCATTGCACTCACATAGGAGTTGACTCCACCAGTTTGCACGCG GCGCGTTTGAAGTAAACGAAGGGCGTCACTACATACATGGAATGCCGATT GAACCCCGCGGAGTCCCATCTCAATGTGTTAGGTTCCGTTTTTGGTTATC TGACTTAGGCTATCTTTCAAGGGGTTCATCTTGGCTGCATGTCCGAGCAC ACAATCAGAATAACGGCCAGGGCGAAAATTATGCTGTACTTCTTGCCACG CACACTGTATAGATTGCGCACTTTTGAAGGAAGCCCGCGCTAGACGCGAT TAAGACTACGAAGGGCTCATTTTAACCCATCCAATGGTCGTTGTTGTCCA GGTTCAGCAAAAAATCGACAAACTCACGGATCTTGATCGAGTATTGTATG ATGCTGGCAAGAAAGAGTTCGAGAAGGTAATGCGAAGTTCATCACCGTGT ATTTTGTTGCATCATGATGGATACATAGTTCCACCCGCAAAGATGTGCAC AACTGCCTGTTTGGGAACTCAACACTCTGGAAAATATCAAAACTGCCTGT GTGGGGACTCAACACTCTGAAAAATATCAAAGGAGAAACACGTTGCCCGA TAAAATGATGGCTACGTTGTCTTCTAGTAGTGTTGACCCATTTTTGCTTG AGTTGGATTCGGTAGATGACTGGAAATTCTTCATGGAGGGTAACCCGGGC CCATGCTCGCCATTCATTTCACTACCTGTGGCAGAGGATAGCACCATACG CTAATTCGATCCAAGAGGACAGTACTCAGTTTGAGGAGCTGCAGAATACC ATCAGCAACTACCTGGACGGCAATTCTTCGAGCATGGCTCATCCAATGTA AGTATGTAGATACAGCACCAGTCTAGGACCTAACCCTACATACGCGGAGA TGCCGGTAATCACCGAAGGCGCGATTGACTGGTGGTGGTACTGTTACAAC TACTGGAGTCCCGGTAGCCAACTTGGCAGACATGCGGGGATTGAGTCGGT TTGAGTTTTTCCCTGCCCGTGGGAGTTGTAATCATTAGTCTACATGTGTA TTTGTTCCCAAAGAACACCCAGGGCAAGATGTACAAAACAAAAAGAGTAA TATTTAGTACATTTTCCGTTTGTCCCCTGCCTGGTACATACCTTCAAGTT GCTCATTCTGGCATGGCGCGCCCTCTTTCCCCGCCTGCGTGGTACTTCTC CGTTCCGAACAGGTACCGAAGCATGAATGTCTACCAAGAGCCGCCGTTGC AGAAGTACCCGTTCTAATAATATCTGCACCACGGCGATTCGCTCTTTTCT CTGGCGGAGCGAAGTGGAACAGGGTTCGGGGATCCCCGCCATGTCGGTGG CCGTAGTGTCGATGATGAAGACCCAAAGGACCATTTCCTGCCTGCCGAGG CCGATTGTGTTTCACTCCTTCCTCTCAACCCTCGGCGGTGCCCTTCTCCA ACCGAAGGAGTCCCGGGCCGTGTACTTTAATATAGGCTTGAGTGAACGTT TCTATTTGGTGGTTATTGGATTAATGGGTGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig531:15617..21747-

>mRNA_L-elsbetiae_contig531.13473.1 ID=mRNA_L-elsbetiae_contig531.13473.1|Name=mRNA_L-elsbetiae_contig531.13473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2016bp|location=Sequence derived from alignment at L-elsbetiae_contig531:15617..21747- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCAAAACAGCAGACCGGGTGGATTCACAATCGACGCGGTGGTATTT
AAACGGACTGGTGCAGGCGACGGCGGCGGGCAAGGCAAACCAAATGCGCA
AAACAGCAGACCGGGTGGATTCACAATCGACGCGGTGGTATTTAAACGGA
CTGGTGCAGGCGACGGCGGCGGGCAAGGCAAACCAAGTGTCAAATGTCGC
CTTTGTTAAAACGCACAAAACGGCATCGACAACGCTGGCGGCCATCATGT
ACCGCTATGCAGTGCGACACGATCTTAAGGTGTCAAATGTCGCCTTTGTT
AAAACGCACAAAACGGCATCGACAACGCTGGCGGCCATCATGTACCGCTA
TGCAGTGCGACACGATCTTAAGCTGTCGCATTTTGGACGTTCGACGTCCG
TCAACCTCAAGACGGCTGCGACTCAGCTGTCGCATTTTGGACGTTCGACG
TCCGTCAACCTCAAGACGGCTGCGACTCAGACGAAGCAAAACAGGCAGCC
TGTGGACATCATGCACTACCACATTACTGCAAAGGGCCAGTACGAAGGGA
CTTGGGACGAAGCGGTCGGGTATTACAGAGGCATTATGCGCCATCCTGAT
CGGATCAACTTCATTACGGTTTTGCGGGAGCCTAGGTCACATCTTCTCAG
ACGAAGCAAAACAGGCAGCCTGTGGACATCATGCACTACCACATTACTGC
AAAGGGCCAGTACGAAGGGACTTGGGACGAAGCGGTCGGGTATTACAGAG
GCATTATGCGCCATCCTGATCGGATCAACTTCATTACGGTTTTGCGGGAG
CCTAGGTCACATCTTCTCAGCTACTACTACTACTACATCCAACCCCGAAA
TCAGCTACTACTACTACTACATCCAACCCCGAAATCAGCTTTCCATCGAG
GAATTCTTGATGAACCCGCACGATCCTCAAGACTTCGACCACGGGCTCCT
GCTGAACCCTCTTTCGGCAGAGTTTGGAGTGAGAACGGTAGAAGACATGG
AGGACCTCATCCAGAAAACGCTCCCAGATTTCAAGTTGCTTTCCATCGAG
GAATTCTTGATGAACCCGCACGATCCTCAAGACTTCGACCACGGGCTCCT
GCTGAACCCTCTTTCGGCAGAGTTTGGAGTGAGAACGGTAGAAGACATGG
AGGACCTCATCCAGAAAACGCTCCCAGATTTCAAGTTGATAATGCTGACA
GAACGGCTGGACGAAGGGCTGCTAGTTATGCGACGGATGCTGCACTGGCA
TTTGATCGACGTTACGTATTGCGATCTGAACAAGACAAAGGCGGGCGACA
GACGATGGGACGGCAAACCCTTTGTCGACAGGCCGCACTTCGACAGCCTC
CCGAAAGAGATAATGCTGACAGAACGGCTGGACGAAGGGCTGCTAGTTAT
GCGACGGATGCTGCACTGGCATTTGATCGACGTTACGTATTGCGATCTGA
ACAAGACAAAGGCGGGCGACAGACGATGGGACGGCAAACCCTTTGTCGAC
AGGCCGCACTTCGACAGCCTCCCGAAAGAGGTTCAGCAAAAAATCGACAA
ACTCACGGATCTTGATCGAGTATTGTATGATGCTGGCAAGAAAGAGTTCG
AGAAGGTTCAGCAAAAAATCGACAAACTCACGGATCTTGATCGAGTATTG
TATGATGCTGGCAAGAAAGAGTTCGAGAAGAGGATAGCACCATACGCTAA
TTCGATCCAAGAGGACAGTACTCAGTTTGAGGAGCTGCAGAATACCATCA
GCAACTACCTGGACGGCAATTCTTCGAGCATGGCTCATCCAATAGGATAG
CACCATACGCTAATTCGATCCAAGAGGACAGTACTCAGTTTGAGGAGCTG
CAGAATACCATCAGCAACTACCTGGACGGCAATTCTTCGAGCATGGCTCA
TCCAATGTACCGAAGCATGAATGTCTACCAAGAGCCGCCGTTGCAGAAGT
ACCCGTTCTAAGTACCGAAGCATGAATGTCTACCAAGAGCCGCCGTTGCA
GAAGTACCCGTTCTAA
back to top