mRNA_L-elsbetiae_contig5306.13465.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A6H5L5P4_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P4_9PHAE) HSP 1 Score: 144 bits (364), Expect = 2.880e-40 Identity = 92/155 (59.35%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 83 LRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAWFARRTVTLLLSSSSSAAIGSGARFDCEQAVWSCVVG-LVRLNCGGEDVAVALYASTAAVLATALAVQQIILVSAGLTSLELRKGRK-PXXXXXARPSRGVPTSTADRSQSSQGHRYSWASG 541 +RDHHCVWVGQCIAERNRRSFL FL+ LAGLS WF+RR V L S +SA G C+QAVW V+ L+R N GGED+ VA+YA T +LATALA QQI LVSAGLTSLELR+ RK P R RG TS+ADRS + SW G Sbjct: 1 MRDHHCVWVGQCIAERNRRSFLGFLILLAGLSFWFSRRVVMALSSGETSACRDDGRA--CKQAVWPHVLRHLLRTNRGGEDLGVAIYALTTGLLATALAAQQIFLVSAGLTSLELRRARKSPLLSHAGRGRRG--TSSADRSAD---YSRSWQGG 148
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: D7FXG9_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG9_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.780e-29 Identity = 64/105 (60.95%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 74 TFRLRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAWFARRTVTLLLSSSSSAAIGSGARFDCEQAVWSCVVG-LVRLNCGGEDVAVALYASTAAVLATALAVQQ 385 TFR+RDHHCVWVGQC+AERNRRSFL FL+ LAG+S WF+RR V L S + A G C+QAVW V+ L+R N GGEDV VA+Y TA +LATALA Q+ Sbjct: 32 TFRMRDHHCVWVGQCVAERNRRSFLGFLILLAGMSFWFSRREVMALSSGETGACPDDGRA--CKQAVWPHVLRHLLRTNRGGEDVGVAIYVLTAGLLATALAAQE 134
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A813HAH9_POLGL (Palmitoyltransferase (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HAH9_POLGL) HSP 1 Score: 55.8 bits (133), Expect = 2.630e-6 Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 56 CSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAWFARRTVTLLLSSSSSAAIGSGARFDCEQAVWSCVVGLVRLNCGGEDVAVALYASTAAVLATALAVQQIILVSAGLTSLELRK 430 C +C T RDHHCVW+ QC+ N RSF+AF+ + L AW + S AA G + +W ++ +L+ + A+YA+ ++ AL + Q+ +SAGLT+ E +K Sbjct: 44 CRVCAHTVHRRDHHCVWINQCVGSHNHRSFVAFVSGVTVL-AW------AYACMACSKAASEEGDQGTVADFLWQVLMIEQKLS---PLMLGAVYAAGFSLFTLALFIGQVANISAGLTAYERKK 158
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A6P6YHV9_DERPT (Palmitoyltransferase n=2 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YHV9_DERPT) HSP 1 Score: 55.8 bits (133), Expect = 6.510e-6 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2 Query: 44 RSGRCSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAWFARRTVTLLL 214 RS CS+C R DHHC WVG C+ +RN RSF FL+ L+ + + + ++L Sbjct: 232 RSSHCSVCNRCIERFDHHCPWVGNCVGQRNYRSFYMFLLSLSAYGIFTSANEIVVIL 288
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A813EM49_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EM49_POLGL) HSP 1 Score: 55.8 bits (133), Expect = 8.140e-6 Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 56 CSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAWFARRTVTLLLSSSSSAAIGSGARFDCEQAVWSCVVGLVRLNCGGEDVAVALYASTAAVLATALAVQQIILVSAGLTSLELRK 430 C +C T RDHHCVW+ QC+ N RSF+AF+ + L AW + S AA G + +W ++ +L+ + A+YA+ ++ AL + Q+ +SAGLT+ E +K Sbjct: 881 CRVCAHTVHRRDHHCVWINQCVGSHNHRSFVAFVSGVTVL-AW------AYACMACSKAASEEGDQGTVADFLWQVLMIEQKLS---PLMLGAVYAAGFSLFTLALFIGQVANISAGLTAYERKK 995
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A813JXF4_POLGL (Palmitoyltransferase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JXF4_POLGL) HSP 1 Score: 52.0 bits (123), Expect = 2.850e-5 Identity = 18/33 (54.55%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 56 CSICKRTFRLRDHHCVWVGQCIAERNRRSFLAF 154 C +C T RDHHCVW+ QC+ N RSF+AF Sbjct: 54 CRVCAHTVHRRDHHCVWINQCVGSHNHRSFVAF 86
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A1S3W3I7_ERIEU (Palmitoyltransferase n=2 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3W3I7_ERIEU) HSP 1 Score: 53.1 bits (126), Expect = 5.320e-5 Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 2 Query: 44 RSGRCSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAW-FARRTVTLLLSS 220 R+ CS+C DHHC WVG C+ +RN RSF F++ L+ L+ + FA T +LL S Sbjct: 72 RASHCSLCDNCVERFDHHCPWVGNCVGQRNYRSFYMFILSLSFLTVFIFAFTTTHILLRS 131
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: A0A8J4PYK2_9MYCE (Palmitoyltransferase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PYK2_9MYCE) HSP 1 Score: 53.1 bits (126), Expect = 6.020e-5 Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = 2 Query: 44 RSGRCSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFL 157 RS CSIC DHHCVW+G CI ERN R FL FL Sbjct: 430 RSSHCSICNNCVSKFDHHCVWIGNCIGERNYRYFLYFL 467
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: X6MZB3_RETFI (Palmitoyltransferase (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MZB3_RETFI) HSP 1 Score: 52.4 bits (124), Expect = 6.530e-5 Identity = 25/56 (44.64%), Postives = 30/56 (53.57%), Query Frame = 2 Query: 44 RSGRCSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFLVFLAGLSAWFARRTVTLL 211 RS C +C DHHC W+G CIAERN F+ FLV L+ L W + LL Sbjct: 91 RSFHCIVCDNCVERFDHHCPWIGNCIAERNYSYFILFLVCLSLLCVWLGIWCIWLL 146
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Match: G0VCS2_NAUCC (Palmitoyltransferase n=1 Tax=Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630) TaxID=1064592 RepID=G0VCS2_NAUCC) HSP 1 Score: 52.8 bits (125), Expect = 7.250e-5 Identity = 21/38 (55.26%), Postives = 25/38 (65.79%), Query Frame = 2 Query: 44 RSGRCSICKRTFRLRDHHCVWVGQCIAERNRRSFLAFL 157 RS CSIC+ + DHHCVWV C+ +RN R FL FL Sbjct: 194 RSSHCSICETCVLMHDHHCVWVNNCVGQRNYRYFLTFL 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5306.13465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5306.13465.1 >prot_L-elsbetiae_contig5306.13465.1 ID=prot_L-elsbetiae_contig5306.13465.1|Name=mRNA_L-elsbetiae_contig5306.13465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp SDAREATAAASVVAAIRAVQYLQANVSLAGPSLRMGWAVHRRAKSPLFPGback to top mRNA from alignment at L-elsbetiae_contig5306:8795..11611+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5306.13465.1 ID=mRNA_L-elsbetiae_contig5306.13465.1|Name=mRNA_L-elsbetiae_contig5306.13465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2817bp|location=Sequence derived from alignment at L-elsbetiae_contig5306:8795..11611+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5306:8795..11611+ >mRNA_L-elsbetiae_contig5306.13465.1 ID=mRNA_L-elsbetiae_contig5306.13465.1|Name=mRNA_L-elsbetiae_contig5306.13465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig5306:8795..11611+ (Laminarionema elsbetiae ELsaHSoW15)back to top |